1*c4762a1bSJed Brown static char help[] = "Tests various 3-dimensional DMDA routines.\n\n"; 2*c4762a1bSJed Brown 3*c4762a1bSJed Brown #include <petscdm.h> 4*c4762a1bSJed Brown #include <petscdmda.h> 5*c4762a1bSJed Brown #include <petscao.h> 6*c4762a1bSJed Brown 7*c4762a1bSJed Brown int main(int argc,char **argv) 8*c4762a1bSJed Brown { 9*c4762a1bSJed Brown PetscMPIInt rank; 10*c4762a1bSJed Brown PetscInt M = 3,N = 5,P=3,s=1,w=2,nloc,l,i,j,k,kk,m = PETSC_DECIDE,n = PETSC_DECIDE,p = PETSC_DECIDE; 11*c4762a1bSJed Brown PetscErrorCode ierr; 12*c4762a1bSJed Brown PetscInt Xs,Xm,Ys,Ym,Zs,Zm,iloc,*iglobal; 13*c4762a1bSJed Brown const PetscInt *ltog; 14*c4762a1bSJed Brown PetscInt *lx = NULL,*ly = NULL,*lz = NULL; 15*c4762a1bSJed Brown PetscBool test_order = PETSC_FALSE; 16*c4762a1bSJed Brown DM da; 17*c4762a1bSJed Brown PetscViewer viewer; 18*c4762a1bSJed Brown Vec local,global; 19*c4762a1bSJed Brown PetscScalar value; 20*c4762a1bSJed Brown DMBoundaryType bx = DM_BOUNDARY_NONE,by = DM_BOUNDARY_NONE,bz = DM_BOUNDARY_NONE; 21*c4762a1bSJed Brown DMDAStencilType stencil_type = DMDA_STENCIL_BOX; 22*c4762a1bSJed Brown AO ao; 23*c4762a1bSJed Brown PetscBool flg = PETSC_FALSE; 24*c4762a1bSJed Brown 25*c4762a1bSJed Brown ierr = PetscInitialize(&argc,&argv,(char*)0,help);if (ierr) return ierr; 26*c4762a1bSJed Brown ierr = PetscViewerDrawOpen(PETSC_COMM_WORLD,0,"",300,0,400,300,&viewer);CHKERRQ(ierr); 27*c4762a1bSJed Brown 28*c4762a1bSJed Brown /* Read options */ 29*c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-NX",&M,NULL);CHKERRQ(ierr); 30*c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-NY",&N,NULL);CHKERRQ(ierr); 31*c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-NZ",&P,NULL);CHKERRQ(ierr); 32*c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-m",&m,NULL);CHKERRQ(ierr); 33*c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-n",&n,NULL);CHKERRQ(ierr); 34*c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-p",&p,NULL);CHKERRQ(ierr); 35*c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-s",&s,NULL);CHKERRQ(ierr); 36*c4762a1bSJed Brown ierr = PetscOptionsGetInt(NULL,NULL,"-w",&w,NULL);CHKERRQ(ierr); 37*c4762a1bSJed Brown flg = PETSC_FALSE; 38*c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-star",&flg,NULL);CHKERRQ(ierr); 39*c4762a1bSJed Brown if (flg) stencil_type = DMDA_STENCIL_STAR; 40*c4762a1bSJed Brown flg = PETSC_FALSE; 41*c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-box",&flg,NULL);CHKERRQ(ierr); 42*c4762a1bSJed Brown if (flg) stencil_type = DMDA_STENCIL_BOX; 43*c4762a1bSJed Brown 44*c4762a1bSJed Brown flg = PETSC_FALSE; 45*c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-xperiodic",&flg,NULL);CHKERRQ(ierr); 46*c4762a1bSJed Brown if (flg) bx = DM_BOUNDARY_PERIODIC; 47*c4762a1bSJed Brown flg = PETSC_FALSE; 48*c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-xghosted",&flg,NULL);CHKERRQ(ierr); 49*c4762a1bSJed Brown if (flg) bx = DM_BOUNDARY_GHOSTED; 50*c4762a1bSJed Brown flg = PETSC_FALSE; 51*c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-xnonghosted",&flg,NULL);CHKERRQ(ierr); 52*c4762a1bSJed Brown 53*c4762a1bSJed Brown flg = PETSC_FALSE; 54*c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-yperiodic",&flg,NULL);CHKERRQ(ierr); 55*c4762a1bSJed Brown if (flg) by = DM_BOUNDARY_PERIODIC; 56*c4762a1bSJed Brown flg = PETSC_FALSE; 57*c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-yghosted",&flg,NULL);CHKERRQ(ierr); 58*c4762a1bSJed Brown if (flg) by = DM_BOUNDARY_GHOSTED; 59*c4762a1bSJed Brown flg = PETSC_FALSE; 60*c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-ynonghosted",&flg,NULL);CHKERRQ(ierr); 61*c4762a1bSJed Brown 62*c4762a1bSJed Brown flg = PETSC_FALSE; 63*c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-zperiodic",&flg,NULL);CHKERRQ(ierr); 64*c4762a1bSJed Brown if (flg) bz = DM_BOUNDARY_PERIODIC; 65*c4762a1bSJed Brown flg = PETSC_FALSE; 66*c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-zghosted",&flg,NULL);CHKERRQ(ierr); 67*c4762a1bSJed Brown if (flg) bz = DM_BOUNDARY_GHOSTED; 68*c4762a1bSJed Brown flg = PETSC_FALSE; 69*c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-znonghosted",&flg,NULL);CHKERRQ(ierr); 70*c4762a1bSJed Brown 71*c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-testorder",&test_order,NULL);CHKERRQ(ierr); 72*c4762a1bSJed Brown 73*c4762a1bSJed Brown flg = PETSC_FALSE; 74*c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-distribute",&flg,NULL);CHKERRQ(ierr); 75*c4762a1bSJed Brown if (flg) { 76*c4762a1bSJed Brown if (m == PETSC_DECIDE) SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_USER_INPUT,"Must set -m option with -distribute option"); 77*c4762a1bSJed Brown ierr = PetscMalloc1(m,&lx);CHKERRQ(ierr); 78*c4762a1bSJed Brown for (i=0; i<m-1; i++) lx[i] = 4; 79*c4762a1bSJed Brown lx[m-1] = M - 4*(m-1); 80*c4762a1bSJed Brown if (n == PETSC_DECIDE) SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_USER_INPUT,"Must set -n option with -distribute option"); 81*c4762a1bSJed Brown ierr = PetscMalloc1(n,&ly);CHKERRQ(ierr); 82*c4762a1bSJed Brown for (i=0; i<n-1; i++) ly[i] = 2; 83*c4762a1bSJed Brown ly[n-1] = N - 2*(n-1); 84*c4762a1bSJed Brown if (p == PETSC_DECIDE) SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_USER_INPUT,"Must set -p option with -distribute option"); 85*c4762a1bSJed Brown ierr = PetscMalloc1(p,&lz);CHKERRQ(ierr); 86*c4762a1bSJed Brown for (i=0; i<p-1; i++) lz[i] = 2; 87*c4762a1bSJed Brown lz[p-1] = P - 2*(p-1); 88*c4762a1bSJed Brown } 89*c4762a1bSJed Brown 90*c4762a1bSJed Brown /* Create distributed array and get vectors */ 91*c4762a1bSJed Brown ierr = DMDACreate3d(PETSC_COMM_WORLD,bx,by,bz,stencil_type,M,N,P,m,n,p,w,s,lx,ly,lz,&da);CHKERRQ(ierr); 92*c4762a1bSJed Brown ierr = DMSetFromOptions(da);CHKERRQ(ierr); 93*c4762a1bSJed Brown ierr = DMSetUp(da);CHKERRQ(ierr); 94*c4762a1bSJed Brown ierr = PetscFree(lx);CHKERRQ(ierr); 95*c4762a1bSJed Brown ierr = PetscFree(ly);CHKERRQ(ierr); 96*c4762a1bSJed Brown ierr = PetscFree(lz);CHKERRQ(ierr); 97*c4762a1bSJed Brown ierr = DMView(da,viewer);CHKERRQ(ierr); 98*c4762a1bSJed Brown ierr = DMCreateGlobalVector(da,&global);CHKERRQ(ierr); 99*c4762a1bSJed Brown ierr = DMCreateLocalVector(da,&local);CHKERRQ(ierr); 100*c4762a1bSJed Brown 101*c4762a1bSJed Brown /* Set global vector; send ghost points to local vectors */ 102*c4762a1bSJed Brown value = 1; 103*c4762a1bSJed Brown ierr = VecSet(global,value);CHKERRQ(ierr); 104*c4762a1bSJed Brown ierr = DMGlobalToLocalBegin(da,global,INSERT_VALUES,local);CHKERRQ(ierr); 105*c4762a1bSJed Brown ierr = DMGlobalToLocalEnd(da,global,INSERT_VALUES,local);CHKERRQ(ierr); 106*c4762a1bSJed Brown 107*c4762a1bSJed Brown /* Scale local vectors according to processor rank; pass to global vector */ 108*c4762a1bSJed Brown ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr); 109*c4762a1bSJed Brown value = rank; 110*c4762a1bSJed Brown ierr = VecScale(local,value);CHKERRQ(ierr); 111*c4762a1bSJed Brown ierr = DMLocalToGlobalBegin(da,local,INSERT_VALUES,global);CHKERRQ(ierr); 112*c4762a1bSJed Brown ierr = DMLocalToGlobalEnd(da,local,INSERT_VALUES,global);CHKERRQ(ierr); 113*c4762a1bSJed Brown 114*c4762a1bSJed Brown if (!test_order) { /* turn off printing when testing ordering mappings */ 115*c4762a1bSJed Brown if (M*N*P<40) { 116*c4762a1bSJed Brown ierr = PetscPrintf(PETSC_COMM_WORLD,"\nGlobal Vector:\n");CHKERRQ(ierr); 117*c4762a1bSJed Brown ierr = VecView(global,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 118*c4762a1bSJed Brown ierr = PetscPrintf(PETSC_COMM_WORLD,"\n");CHKERRQ(ierr); 119*c4762a1bSJed Brown } 120*c4762a1bSJed Brown } 121*c4762a1bSJed Brown 122*c4762a1bSJed Brown /* Send ghost points to local vectors */ 123*c4762a1bSJed Brown ierr = DMGlobalToLocalBegin(da,global,INSERT_VALUES,local);CHKERRQ(ierr); 124*c4762a1bSJed Brown ierr = DMGlobalToLocalEnd(da,global,INSERT_VALUES,local);CHKERRQ(ierr); 125*c4762a1bSJed Brown 126*c4762a1bSJed Brown flg = PETSC_FALSE; 127*c4762a1bSJed Brown ierr = PetscOptionsGetBool(NULL,NULL,"-local_print",&flg,NULL);CHKERRQ(ierr); 128*c4762a1bSJed Brown if (flg) { 129*c4762a1bSJed Brown PetscViewer sviewer; 130*c4762a1bSJed Brown ierr = PetscViewerASCIIPushSynchronized(PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 131*c4762a1bSJed Brown ierr = PetscSynchronizedPrintf(PETSC_COMM_WORLD,"\nLocal Vector: processor %d\n",rank);CHKERRQ(ierr); 132*c4762a1bSJed Brown ierr = PetscViewerGetSubViewer(PETSC_VIEWER_STDOUT_WORLD,PETSC_COMM_SELF,&sviewer);CHKERRQ(ierr); 133*c4762a1bSJed Brown ierr = VecView(local,sviewer);CHKERRQ(ierr); 134*c4762a1bSJed Brown ierr = PetscViewerRestoreSubViewer(PETSC_VIEWER_STDOUT_WORLD,PETSC_COMM_SELF,&sviewer);CHKERRQ(ierr); 135*c4762a1bSJed Brown ierr = PetscSynchronizedFlush(PETSC_COMM_WORLD,PETSC_STDOUT);CHKERRQ(ierr); 136*c4762a1bSJed Brown ierr = PetscViewerASCIIPopSynchronized(PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 137*c4762a1bSJed Brown } 138*c4762a1bSJed Brown 139*c4762a1bSJed Brown /* Tests mappings betweeen application/PETSc orderings */ 140*c4762a1bSJed Brown if (test_order) { 141*c4762a1bSJed Brown ISLocalToGlobalMapping ltogm; 142*c4762a1bSJed Brown 143*c4762a1bSJed Brown ierr = DMGetLocalToGlobalMapping(da,<ogm);CHKERRQ(ierr); 144*c4762a1bSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltogm,&nloc);CHKERRQ(ierr); 145*c4762a1bSJed Brown ierr = ISLocalToGlobalMappingGetIndices(ltogm,<og);CHKERRQ(ierr); 146*c4762a1bSJed Brown 147*c4762a1bSJed Brown ierr = DMDAGetGhostCorners(da,&Xs,&Ys,&Zs,&Xm,&Ym,&Zm);CHKERRQ(ierr); 148*c4762a1bSJed Brown ierr = DMDAGetAO(da,&ao);CHKERRQ(ierr); 149*c4762a1bSJed Brown /* ierr = AOView(ao,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); */ 150*c4762a1bSJed Brown ierr = PetscMalloc1(nloc,&iglobal);CHKERRQ(ierr); 151*c4762a1bSJed Brown 152*c4762a1bSJed Brown /* Set iglobal to be global indices for each processor's local and ghost nodes, 153*c4762a1bSJed Brown using the DMDA ordering of grid points */ 154*c4762a1bSJed Brown kk = 0; 155*c4762a1bSJed Brown for (k=Zs; k<Zs+Zm; k++) { 156*c4762a1bSJed Brown for (j=Ys; j<Ys+Ym; j++) { 157*c4762a1bSJed Brown for (i=Xs; i<Xs+Xm; i++) { 158*c4762a1bSJed Brown iloc = w*((k-Zs)*Xm*Ym + (j-Ys)*Xm + i-Xs); 159*c4762a1bSJed Brown for (l=0; l<w; l++) { 160*c4762a1bSJed Brown iglobal[kk++] = ltog[iloc+l]; 161*c4762a1bSJed Brown } 162*c4762a1bSJed Brown } 163*c4762a1bSJed Brown } 164*c4762a1bSJed Brown } 165*c4762a1bSJed Brown 166*c4762a1bSJed Brown /* Map this to the application ordering (which for DMDAs is just the natural ordering 167*c4762a1bSJed Brown that would be used for 1 processor, numbering most rapidly by x, then y, then z) */ 168*c4762a1bSJed Brown ierr = AOPetscToApplication(ao,nloc,iglobal);CHKERRQ(ierr); 169*c4762a1bSJed Brown 170*c4762a1bSJed Brown /* Then map the application ordering back to the PETSc DMDA ordering */ 171*c4762a1bSJed Brown ierr = AOApplicationToPetsc(ao,nloc,iglobal);CHKERRQ(ierr); 172*c4762a1bSJed Brown 173*c4762a1bSJed Brown /* Verify the mappings */ 174*c4762a1bSJed Brown kk=0; 175*c4762a1bSJed Brown for (k=Zs; k<Zs+Zm; k++) { 176*c4762a1bSJed Brown for (j=Ys; j<Ys+Ym; j++) { 177*c4762a1bSJed Brown for (i=Xs; i<Xs+Xm; i++) { 178*c4762a1bSJed Brown iloc = w*((k-Zs)*Xm*Ym + (j-Ys)*Xm + i-Xs); 179*c4762a1bSJed Brown for (l=0; l<w; l++) { 180*c4762a1bSJed Brown if (iglobal[kk] != ltog[iloc+l]) { 181*c4762a1bSJed Brown ierr = PetscPrintf(MPI_COMM_WORLD,"[%D] Problem with mapping: z=%D, j=%D, i=%D, l=%D, petsc1=%D, petsc2=%D\n",rank,k,j,i,l,ltog[iloc+l],iglobal[kk]);CHKERRQ(ierr); 182*c4762a1bSJed Brown } 183*c4762a1bSJed Brown kk++; 184*c4762a1bSJed Brown } 185*c4762a1bSJed Brown } 186*c4762a1bSJed Brown } 187*c4762a1bSJed Brown } 188*c4762a1bSJed Brown ierr = PetscFree(iglobal);CHKERRQ(ierr); 189*c4762a1bSJed Brown ierr = ISLocalToGlobalMappingRestoreIndices(ltogm,<og);CHKERRQ(ierr); 190*c4762a1bSJed Brown } 191*c4762a1bSJed Brown 192*c4762a1bSJed Brown /* Free memory */ 193*c4762a1bSJed Brown ierr = PetscViewerDestroy(&viewer);CHKERRQ(ierr); 194*c4762a1bSJed Brown ierr = VecDestroy(&local);CHKERRQ(ierr); 195*c4762a1bSJed Brown ierr = VecDestroy(&global);CHKERRQ(ierr); 196*c4762a1bSJed Brown ierr = DMDestroy(&da);CHKERRQ(ierr); 197*c4762a1bSJed Brown ierr = PetscFinalize(); 198*c4762a1bSJed Brown return ierr; 199*c4762a1bSJed Brown } 200*c4762a1bSJed Brown 201*c4762a1bSJed Brown /*TEST 202*c4762a1bSJed Brown 203*c4762a1bSJed Brown test: 204*c4762a1bSJed Brown args: -testorder -nox 205*c4762a1bSJed Brown 206*c4762a1bSJed Brown TEST*/ 207*c4762a1bSJed Brown 208*c4762a1bSJed Brown 209*c4762a1bSJed Brown 210*c4762a1bSJed Brown 211*c4762a1bSJed Brown 212*c4762a1bSJed Brown 213*c4762a1bSJed Brown 214*c4762a1bSJed Brown 215*c4762a1bSJed Brown 216*c4762a1bSJed Brown 217*c4762a1bSJed Brown 218*c4762a1bSJed Brown 219*c4762a1bSJed Brown 220*c4762a1bSJed Brown 221*c4762a1bSJed Brown 222*c4762a1bSJed Brown 223*c4762a1bSJed Brown 224*c4762a1bSJed Brown 225*c4762a1bSJed Brown 226