xref: /petsc/src/ksp/pc/impls/bddc/bddc.c (revision 839e9adb99c0e30cbd23691823d27455cfa281b5)
153cdbc3dSStefano Zampini /* TODOLIST
2eb97c9d2SStefano Zampini 
3eb97c9d2SStefano Zampini    Solvers
4a0d3c3abSStefano Zampini    - Add support for cholesky for coarse solver (similar to local solvers)
5eb97c9d2SStefano Zampini    - Propagate ksp prefixes for solvers to mat objects?
6eb97c9d2SStefano Zampini 
7eb97c9d2SStefano Zampini    User interface
80f202f7eSStefano Zampini    - ** DM attached to pc?
9eb97c9d2SStefano Zampini 
10eb97c9d2SStefano Zampini    Debugging output
11b9b85e73SStefano Zampini    - * Better management of verbosity levels of debugging output
12eb97c9d2SStefano Zampini 
13eb97c9d2SStefano Zampini    Extra
14b9b85e73SStefano Zampini    - *** Is it possible to work with PCBDDCGraph on boundary indices only (less memory consumed)?
15eb97c9d2SStefano Zampini    - BDDC with MG framework?
16eb97c9d2SStefano Zampini 
17eb97c9d2SStefano Zampini    MATIS related operations contained in BDDC code
18eb97c9d2SStefano Zampini    - Provide general case for subassembling
19eb97c9d2SStefano Zampini 
2053cdbc3dSStefano Zampini */
210c7d97c5SJed Brown 
22ab5c6b0cSJed Brown #include <../src/ksp/pc/impls/bddc/bddc.h> /*I "petscpc.h" I*/  /* includes for fortran wrappers */
23ab5c6b0cSJed Brown #include <../src/ksp/pc/impls/bddc/bddcprivate.h>
243b03a366Sstefano_zampini #include <petscblaslapack.h>
25674ae819SStefano Zampini 
26f3d41395Sstefano_zampini static PetscBool  cited = PETSC_FALSE;
27f3d41395Sstefano_zampini static const char citation[] =
28f3d41395Sstefano_zampini "@article{ZampiniPCBDDC,\n"
29f3d41395Sstefano_zampini "author = {Stefano Zampini},\n"
30f3d41395Sstefano_zampini "title = {{PCBDDC}: A Class of Robust Dual-Primal Methods in {PETS}c},\n"
31f3d41395Sstefano_zampini "journal = {SIAM Journal on Scientific Computing},\n"
32f3d41395Sstefano_zampini "volume = {38},\n"
33f3d41395Sstefano_zampini "number = {5},\n"
34f3d41395Sstefano_zampini "pages = {S282-S306},\n"
35f3d41395Sstefano_zampini "year = {2016},\n"
36f3d41395Sstefano_zampini "doi = {10.1137/15M1025785},\n"
37f3d41395Sstefano_zampini "URL = {http://dx.doi.org/10.1137/15M1025785},\n"
38f3d41395Sstefano_zampini "eprint = {http://dx.doi.org/10.1137/15M1025785}\n"
39f3d41395Sstefano_zampini "}\n";
40f3d41395Sstefano_zampini 
410369aaf7SStefano Zampini /* temporarily declare it */
420369aaf7SStefano Zampini PetscErrorCode PCApply_BDDC(PC,Vec,Vec);
430369aaf7SStefano Zampini 
440c7d97c5SJed Brown #undef __FUNCT__
450c7d97c5SJed Brown #define __FUNCT__ "PCSetFromOptions_BDDC"
464416b707SBarry Smith PetscErrorCode PCSetFromOptions_BDDC(PetscOptionItems *PetscOptionsObject,PC pc)
470c7d97c5SJed Brown {
480c7d97c5SJed Brown   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
490c7d97c5SJed Brown   PetscErrorCode ierr;
500c7d97c5SJed Brown 
510c7d97c5SJed Brown   PetscFunctionBegin;
52e55864a3SBarry Smith   ierr = PetscOptionsHead(PetscOptionsObject,"BDDC options");CHKERRQ(ierr);
538eeda7d8SStefano Zampini   /* Verbose debugging */
54a13144ffSStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_check_level","Verbose output for PCBDDC (intended for debug)","none",pcbddc->dbg_flag,&pcbddc->dbg_flag,NULL);CHKERRQ(ierr);
55a13144ffSStefano Zampini   /* Approximate solvers */
56c7017625SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_dirichlet_approximate","Inform PCBDDC that we are using approximate Dirichlet solvers","none",pcbddc->NullSpace_corr[0],&pcbddc->NullSpace_corr[0],NULL);CHKERRQ(ierr);
57c7017625SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_dirichlet_approximate_scale","Inform PCBDDC that we need to scale the Dirichlet solve","none",pcbddc->NullSpace_corr[1],&pcbddc->NullSpace_corr[1],NULL);CHKERRQ(ierr);
58c7017625SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_neumann_approximate","Inform PCBDDC that we are using approximate Neumann solvers","none",pcbddc->NullSpace_corr[2],&pcbddc->NullSpace_corr[2],NULL);CHKERRQ(ierr);
59c7017625SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_neumann_approximate_scale","Inform PCBDDC that we need to scale the Neumann solve","none",pcbddc->NullSpace_corr[3],&pcbddc->NullSpace_corr[3],NULL);CHKERRQ(ierr);
606b78500eSPatrick Sanan   /* Primal space customization */
6108a5cf49SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_local_mat_graph","Use or not adjacency graph of local mat for interface analysis","none",pcbddc->use_local_adj,&pcbddc->use_local_adj,NULL);CHKERRQ(ierr);
62be12c134Sstefano_zampini   ierr = PetscOptionsInt("-pc_bddc_graph_maxcount","Maximum number of shared subdomains for a connected component","none",pcbddc->graphmaxcount,&pcbddc->graphmaxcount,NULL);CHKERRQ(ierr);
638eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_vertices","Use or not corner dofs in coarse space","none",pcbddc->use_vertices,&pcbddc->use_vertices,NULL);CHKERRQ(ierr);
648eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_edges","Use or not edge constraints in coarse space","none",pcbddc->use_edges,&pcbddc->use_edges,NULL);CHKERRQ(ierr);
658eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_faces","Use or not face constraints in coarse space","none",pcbddc->use_faces,&pcbddc->use_faces,NULL);CHKERRQ(ierr);
6614f95afaSStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_vertex_size","Connected components smaller or equal to vertex size will be considered as primal vertices","none",pcbddc->vertex_size,&pcbddc->vertex_size,NULL);CHKERRQ(ierr);
676661aa1dSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_true_nnsp","Use near null space attached to the matrix without modifications","none",pcbddc->use_nnsp_true,&pcbddc->use_nnsp_true,NULL);CHKERRQ(ierr);
6814f95afaSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_qr_single","Use QR factorization for single constraints on cc (QR is always used when multiple constraints are present)","none",pcbddc->use_qr_single,&pcbddc->use_qr_single,NULL);CHKERRQ(ierr);
698eeda7d8SStefano Zampini   /* Change of basis */
70b9b85e73SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_change_of_basis","Use or not internal change of basis on local edge nodes","none",pcbddc->use_change_of_basis,&pcbddc->use_change_of_basis,NULL);CHKERRQ(ierr);
71b9b85e73SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_change_on_faces","Use or not internal change of basis on local face nodes","none",pcbddc->use_change_on_faces,&pcbddc->use_change_on_faces,NULL);CHKERRQ(ierr);
72674ae819SStefano Zampini   if (!pcbddc->use_change_of_basis) {
73674ae819SStefano Zampini     pcbddc->use_change_on_faces = PETSC_FALSE;
74674ae819SStefano Zampini   }
758eeda7d8SStefano Zampini   /* Switch between M_2 (default) and M_3 preconditioners (as defined by C. Dohrmann in the ref. article) */
768eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_switch_static","Switch on static condensation ops around the interface preconditioner","none",pcbddc->switch_static,&pcbddc->switch_static,NULL);CHKERRQ(ierr);
7757de7509SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_coarse_eqs_per_proc","Number of equations per process for coarse problem redistribution (significant only at the coarsest level)","none",pcbddc->coarse_eqs_per_proc,&pcbddc->coarse_eqs_per_proc,NULL);CHKERRQ(ierr);
780298fd71SBarry Smith   ierr = PetscOptionsInt("-pc_bddc_coarsening_ratio","Set coarsening ratio used in multilevel coarsening","none",pcbddc->coarsening_ratio,&pcbddc->coarsening_ratio,NULL);CHKERRQ(ierr);
792b510759SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_levels","Set maximum number of levels for multilevel","none",pcbddc->max_levels,&pcbddc->max_levels,NULL);CHKERRQ(ierr);
80323d395dSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_coarse_estimates","Use estimated eigenvalues for coarse problem","none",pcbddc->use_coarse_estimates,&pcbddc->use_coarse_estimates,NULL);CHKERRQ(ierr);
81674ae819SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_deluxe_scaling","Use deluxe scaling for BDDC","none",pcbddc->use_deluxe_scaling,&pcbddc->use_deluxe_scaling,NULL);CHKERRQ(ierr);
82b96c3477SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_schur_rebuild","Whether or not the interface graph for Schur principal minors has to be rebuilt (i.e. define the interface without any adjacency)","none",pcbddc->sub_schurs_rebuild,&pcbddc->sub_schurs_rebuild,NULL);CHKERRQ(ierr);
83b96c3477SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_schur_layers","Number of dofs' layers for the computation of principal minors (i.e. -1 uses all dofs)","none",pcbddc->sub_schurs_layers,&pcbddc->sub_schurs_layers,NULL);CHKERRQ(ierr);
84b96c3477SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_schur_use_useradj","Whether or not the CSR graph specified by the user should be used for computing successive layers (default is to use adj of local mat)","none",pcbddc->sub_schurs_use_useradj,&pcbddc->sub_schurs_use_useradj,NULL);CHKERRQ(ierr);
85683d3df6SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_schur_exact","Whether or not to use the exact Schur complement instead of the reduced one (which excludes size 1 cc)","none",pcbddc->sub_schurs_exact_schur,&pcbddc->sub_schurs_exact_schur,NULL);CHKERRQ(ierr);
86bf3a8328SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_deluxe_zerorows","Zero rows and columns of deluxe operators associated with primal dofs","none",pcbddc->deluxe_zerorows,&pcbddc->deluxe_zerorows,NULL);CHKERRQ(ierr);
87*839e9adbSstefano_zampini   ierr = PetscOptionsBool("-pc_bddc_deluxe_singlemat","Collapse deluxe operators","none",pcbddc->deluxe_singlemat,&pcbddc->deluxe_singlemat,NULL);CHKERRQ(ierr);
88bf3a8328SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_adaptive_userdefined","Use user-defined constraints (should be attached via MatSetNearNullSpace to pmat) in addition to those adaptively generated","none",pcbddc->adaptive_userdefined,&pcbddc->adaptive_userdefined,NULL);CHKERRQ(ierr);
894c6709b3SStefano Zampini   ierr = PetscOptionsReal("-pc_bddc_adaptive_threshold","Threshold to be used for adaptive selection of constraints","none",pcbddc->adaptive_threshold,&pcbddc->adaptive_threshold,NULL);CHKERRQ(ierr);
9008122e43SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_adaptive_nmin","Minimum number of constraints per connected components","none",pcbddc->adaptive_nmin,&pcbddc->adaptive_nmin,NULL);CHKERRQ(ierr);
9108122e43SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_adaptive_nmax","Maximum number of constraints per connected components","none",pcbddc->adaptive_nmax,&pcbddc->adaptive_nmax,NULL);CHKERRQ(ierr);
923301b35fSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_symmetric","Symmetric computation of primal basis functions","none",pcbddc->symmetric_primal,&pcbddc->symmetric_primal,NULL);CHKERRQ(ierr);
93b0c7d250SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_coarse_adj","Number of processors where to map the coarse adjacency list","none",pcbddc->coarse_adj_red,&pcbddc->coarse_adj_red,NULL);CHKERRQ(ierr);
94b3afcdbeSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_benign_trick","Apply the benign subspace trick to saddle point problems with discontinuous pressures","none",pcbddc->benign_saddle_point,&pcbddc->benign_saddle_point,NULL);CHKERRQ(ierr);
95e9627c49SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_benign_change","Compute the pressure change of basis explicitly","none",pcbddc->benign_change_explicit,&pcbddc->benign_change_explicit,NULL);CHKERRQ(ierr);
9627b6a85dSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_benign_compute_correction","Compute the benign correction during PreSolve","none",pcbddc->benign_compute_correction,&pcbddc->benign_compute_correction,NULL);CHKERRQ(ierr);
97a198735bSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_nonetflux","Automatic computation of no-net-flux quadrature weights","none",pcbddc->compute_nonetflux,&pcbddc->compute_nonetflux,NULL);CHKERRQ(ierr);
984f1b2e48SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_detect_disconnected","Detects disconnected subdomains","none",pcbddc->detect_disconnected,&pcbddc->detect_disconnected,NULL);CHKERRQ(ierr);
9970c64980SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_eliminate_dirichlet","Whether or not we want to eliminate dirichlet dofs during presolve","none",pcbddc->eliminate_dirdofs,&pcbddc->eliminate_dirdofs,NULL);CHKERRQ(ierr);
1000c7d97c5SJed Brown   ierr = PetscOptionsTail();CHKERRQ(ierr);
1010c7d97c5SJed Brown   PetscFunctionReturn(0);
1020c7d97c5SJed Brown }
1036b78500eSPatrick Sanan 
1046b78500eSPatrick Sanan #undef __FUNCT__
1056b78500eSPatrick Sanan #define __FUNCT__ "PCView_BDDC"
1066b78500eSPatrick Sanan static PetscErrorCode PCView_BDDC(PC pc,PetscViewer viewer)
1076b78500eSPatrick Sanan {
1086b78500eSPatrick Sanan   PC_BDDC              *pcbddc = (PC_BDDC*)pc->data;
109e9627c49SStefano Zampini   PC_IS                *pcis = (PC_IS*)pc->data;
1106b78500eSPatrick Sanan   PetscErrorCode       ierr;
1116b78500eSPatrick Sanan   PetscBool            isascii,isstring;
112e9627c49SStefano Zampini   PetscSubcomm         subcomm;
113e9627c49SStefano Zampini   PetscViewer          subviewer;
1146b78500eSPatrick Sanan 
1156b78500eSPatrick Sanan   PetscFunctionBegin;
1166b78500eSPatrick Sanan   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&isascii);CHKERRQ(ierr);
1176b78500eSPatrick Sanan   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERSTRING,&isstring);CHKERRQ(ierr);
1186b78500eSPatrick Sanan   /* Nothing printed for the String viewer */
1196b78500eSPatrick Sanan   /* ASCII viewer */
1206b78500eSPatrick Sanan   if (isascii) {
1214b2aedd3SStefano Zampini     PetscMPIInt   color,rank,size;
122fbad9177SStefano Zampini     PetscInt64    loc[7],gsum[6],gmax[6],gmin[6],totbenign;
123e9627c49SStefano Zampini     PetscScalar   interface_size;
124e9627c49SStefano Zampini     PetscReal     ratio1=0.,ratio2=0.;
125e9627c49SStefano Zampini     Vec           counter;
1266b78500eSPatrick Sanan 
127b74ba07aSstefano_zampini     if (!pc->setupcalled) {
128b74ba07aSstefano_zampini       ierr = PetscViewerASCIIPrintf(viewer,"  Partial information available: preconditioner has not been setup yet\n");CHKERRQ(ierr);
129b74ba07aSstefano_zampini     }
130e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use verbose output: %d\n",pcbddc->dbg_flag);CHKERRQ(ierr);
131e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use user-defined CSR: %d\n",!!pcbddc->mat_graph->nvtxs_csr);CHKERRQ(ierr);
13266da6bd7Sstefano_zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use local mat graph: %d\n",pcbddc->use_local_adj && !pcbddc->mat_graph->nvtxs_csr);CHKERRQ(ierr);
133e9627c49SStefano Zampini     if (pcbddc->mat_graph->twodim) {
134e9627c49SStefano Zampini       ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Connectivity graph topological dimension: 2\n");CHKERRQ(ierr);
135e9627c49SStefano Zampini     } else {
136e9627c49SStefano Zampini       ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Connectivity graph topological dimension: 3\n");CHKERRQ(ierr);
137e9627c49SStefano Zampini     }
138a70d66d9SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Graph max count: %d\n",pcbddc->graphmaxcount);CHKERRQ(ierr);
139a198735bSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use vertices: %d (vertex size %d)\n",pcbddc->use_vertices,pcbddc->vertex_size);CHKERRQ(ierr);
1406b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use edges: %d\n",pcbddc->use_edges);CHKERRQ(ierr);
1416b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use faces: %d\n",pcbddc->use_faces);CHKERRQ(ierr);
1426b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use true near null space: %d\n",pcbddc->use_nnsp_true);CHKERRQ(ierr);
1436b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use QR for single constraints on cc: %d\n",pcbddc->use_qr_single);CHKERRQ(ierr);
1446b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use change of basis on local edge nodes: %d\n",pcbddc->use_change_of_basis);CHKERRQ(ierr);
1456b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use change of basis on local face nodes: %d\n",pcbddc->use_change_on_faces);CHKERRQ(ierr);
14627b6a85dSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: User defined change of basis matrix: %d\n",!!pcbddc->user_ChangeOfBasisMatrix);CHKERRQ(ierr);
14727b6a85dSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Has change of basis matrix: %d\n",!!pcbddc->ChangeOfBasisMatrix);CHKERRQ(ierr);
14827b6a85dSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Eliminate dirichlet boundary dofs: %d\n",pcbddc->eliminate_dirdofs);CHKERRQ(ierr);
1496b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Switch on static condensation ops around the interface preconditioner: %d\n",pcbddc->switch_static);CHKERRQ(ierr);
15027b6a85dSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use exact dirichlet trick: %d\n",pcbddc->use_exact_dirichlet_trick);CHKERRQ(ierr);
1516b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Multilevel max levels: %d\n",pcbddc->max_levels);CHKERRQ(ierr);
152e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Multilevel coarsening ratio: %d\n",pcbddc->coarsening_ratio);CHKERRQ(ierr);
1536b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use estimated eigs for coarse problem: %d\n",pcbddc->use_coarse_estimates);CHKERRQ(ierr);
1546b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use deluxe scaling: %d\n",pcbddc->use_deluxe_scaling);CHKERRQ(ierr);
155e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use deluxe zerorows: %d\n",pcbddc->deluxe_zerorows);CHKERRQ(ierr);
156*839e9adbSstefano_zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use deluxe singlemat: %d\n",pcbddc->deluxe_singlemat);CHKERRQ(ierr);
1576b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Rebuild interface graph for Schur principal minors: %d\n",pcbddc->sub_schurs_rebuild);CHKERRQ(ierr);
1586b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Number of dofs' layers for the computation of principal minors: %d\n",pcbddc->sub_schurs_layers);CHKERRQ(ierr);
1596b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Use user CSR graph to compute successive layers: %d\n",pcbddc->sub_schurs_use_useradj);CHKERRQ(ierr);
160e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Adaptive constraint selection threshold (active %d, userdefined %d): %g\n",pcbddc->adaptive_threshold,pcbddc->adaptive_selection,pcbddc->adaptive_userdefined);CHKERRQ(ierr);
1616b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Min constraints / connected component: %d\n",pcbddc->adaptive_nmin);CHKERRQ(ierr);
1626b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Max constraints / connected component: %d\n",pcbddc->adaptive_nmax);CHKERRQ(ierr);
163e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Invert exact Schur complement for adaptive selection: %d\n",pcbddc->sub_schurs_exact_schur);CHKERRQ(ierr);
1646b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Symmetric computation of primal basis functions: %d\n",pcbddc->symmetric_primal);CHKERRQ(ierr);
1656b78500eSPatrick Sanan     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Num. Procs. to map coarse adjacency list: %d\n",pcbddc->coarse_adj_red);CHKERRQ(ierr);
166e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Coarse eqs per proc (significant at the coarsest level): %d\n",pcbddc->coarse_eqs_per_proc);CHKERRQ(ierr);
167e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Detect disconnected: %d\n",pcbddc->detect_disconnected);CHKERRQ(ierr);
168fc17d649SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Benign subspace trick: %d (change explicit %d)\n",pcbddc->benign_saddle_point,pcbddc->benign_change_explicit);CHKERRQ(ierr);
169a198735bSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Benign subspace trick is active: %d\n",pcbddc->benign_have_null);CHKERRQ(ierr);
170a198735bSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Algebraic computation of no-net-flux %d\n",pcbddc->compute_nonetflux);CHKERRQ(ierr);
171b74ba07aSstefano_zampini     if (!pc->setupcalled) PetscFunctionReturn(0);
1726b78500eSPatrick Sanan 
173fbad9177SStefano Zampini     /* compute interface size */
174e9627c49SStefano Zampini     ierr = VecSet(pcis->vec1_B,1.0);CHKERRQ(ierr);
175e9627c49SStefano Zampini     ierr = MatCreateVecs(pc->pmat,&counter,0);CHKERRQ(ierr);
176e9627c49SStefano Zampini     ierr = VecSet(counter,0.0);CHKERRQ(ierr);
177e9627c49SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,counter,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
178e9627c49SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_B,pcis->vec1_B,counter,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
179e9627c49SStefano Zampini     ierr = VecSum(counter,&interface_size);CHKERRQ(ierr);
180e9627c49SStefano Zampini     ierr = VecDestroy(&counter);CHKERRQ(ierr);
181fbad9177SStefano Zampini 
182fbad9177SStefano Zampini     /* compute some statistics on the domain decomposition */
183e9627c49SStefano Zampini     gsum[0] = 1;
184fbad9177SStefano Zampini     gsum[1] = gsum[2] = gsum[3] = gsum[4] = gsum[5] = 0;
185e9627c49SStefano Zampini     loc[0]  = !!pcis->n;
186e9627c49SStefano Zampini     loc[1]  = pcis->n - pcis->n_B;
187e9627c49SStefano Zampini     loc[2]  = pcis->n_B;
188e9627c49SStefano Zampini     loc[3]  = pcbddc->local_primal_size;
189345ecf6cSStefano Zampini     loc[4]  = pcis->n;
190fbad9177SStefano Zampini     loc[5]  = pcbddc->n_local_subs > 0 ? pcbddc->n_local_subs : (pcis->n ? 1 : 0);
191fbad9177SStefano Zampini     loc[6]  = pcbddc->benign_n;
192fbad9177SStefano Zampini     ierr = MPI_Reduce(loc,gsum,6,MPIU_INT64,MPI_SUM,0,PetscObjectComm((PetscObject)pc));CHKERRQ(ierr);
193fbad9177SStefano Zampini     if (!loc[0]) loc[1] = loc[2] = loc[3] = loc[4] = loc[5] = -1;
194fbad9177SStefano Zampini     ierr = MPI_Reduce(loc,gmax,6,MPIU_INT64,MPI_MAX,0,PetscObjectComm((PetscObject)pc));CHKERRQ(ierr);
195fbad9177SStefano Zampini     if (!loc[0]) loc[1] = loc[2] = loc[3] = loc[4] = loc[5] = PETSC_MAX_INT;
196fbad9177SStefano Zampini     ierr = MPI_Reduce(loc,gmin,6,MPIU_INT64,MPI_MIN,0,PetscObjectComm((PetscObject)pc));CHKERRQ(ierr);
197fbad9177SStefano Zampini     ierr = MPI_Reduce(&loc[6],&totbenign,1,MPIU_INT64,MPI_SUM,0,PetscObjectComm((PetscObject)pc));CHKERRQ(ierr);
198e9627c49SStefano Zampini     if (pcbddc->coarse_size) {
199e9627c49SStefano Zampini       ratio1 = pc->pmat->rmap->N/(1.*pcbddc->coarse_size);
200e9627c49SStefano Zampini       ratio2 = PetscRealPart(interface_size)/pcbddc->coarse_size;
201e9627c49SStefano Zampini     }
202e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: ********************************** STATISTICS AT LEVEL %d **********************************\n",pcbddc->current_level);CHKERRQ(ierr);
203e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Global dofs sizes: all %d interface %d coarse %d\n",pc->pmat->rmap->N,(PetscInt)PetscRealPart(interface_size),pcbddc->coarse_size);CHKERRQ(ierr);
204e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Coarsening ratios: all/coarse %d interface/coarse %d\n",(PetscInt)ratio1,(PetscInt)ratio2);CHKERRQ(ierr);
205e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Active processes : %d\n",(PetscInt)gsum[0]);CHKERRQ(ierr);
206fbad9177SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Total subdomains : %d\n",(PetscInt)gsum[5]);CHKERRQ(ierr);
207345ecf6cSStefano Zampini     if (pcbddc->benign_have_null) {
208345ecf6cSStefano Zampini       ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Benign subs      : %d\n",(PetscInt)totbenign);CHKERRQ(ierr);
209345ecf6cSStefano Zampini     }
210e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Dofs type        :\tMIN\tMAX\tMEAN\n",(PetscInt)gmin[1],(PetscInt)gmax[1],(PetscInt)(gsum[1]/gsum[0]));CHKERRQ(ierr);
211e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Interior  dofs   :\t%d\t%d\t%d\n",(PetscInt)gmin[1],(PetscInt)gmax[1],(PetscInt)(gsum[1]/gsum[0]));CHKERRQ(ierr);
212e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Interface dofs   :\t%d\t%d\t%d\n",(PetscInt)gmin[2],(PetscInt)gmax[2],(PetscInt)(gsum[2]/gsum[0]));CHKERRQ(ierr);
213e9627c49SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Primal    dofs   :\t%d\t%d\t%d\n",(PetscInt)gmin[3],(PetscInt)gmax[3],(PetscInt)(gsum[3]/gsum[0]));CHKERRQ(ierr);
214345ecf6cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Local     dofs   :\t%d\t%d\t%d\n",(PetscInt)gmin[4],(PetscInt)gmax[4],(PetscInt)(gsum[4]/gsum[0]));CHKERRQ(ierr);
215fbad9177SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: Local     subs   :\t%d\t%d\n",(PetscInt)gmin[5],(PetscInt)gmax[5]);CHKERRQ(ierr);
21627b6a85dSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  BDDC: ********************************** COARSE PROBLEM DETAILS *********************************\n",pcbddc->current_level);CHKERRQ(ierr);
21727b6a85dSStefano Zampini     ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
218e9627c49SStefano Zampini 
219fbad9177SStefano Zampini     /* the coarse problem can be handled by a different communicator */
220e9627c49SStefano Zampini     if (pcbddc->coarse_ksp) color = 1;
221e9627c49SStefano Zampini     else color = 0;
222e9627c49SStefano Zampini     ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)pc),&rank);CHKERRQ(ierr);
2234b2aedd3SStefano Zampini     ierr = MPI_Comm_size(PetscObjectComm((PetscObject)pc),&size);CHKERRQ(ierr);
224e9627c49SStefano Zampini     ierr = PetscSubcommCreate(PetscObjectComm((PetscObject)pc),&subcomm);CHKERRQ(ierr);
2254b2aedd3SStefano Zampini     ierr = PetscSubcommSetNumber(subcomm,PetscMin(size,2));CHKERRQ(ierr);
226e9627c49SStefano Zampini     ierr = PetscSubcommSetTypeGeneral(subcomm,color,rank);CHKERRQ(ierr);
227e9627c49SStefano Zampini     ierr = PetscViewerGetSubViewer(viewer,PetscSubcommChild(subcomm),&subviewer);CHKERRQ(ierr);
228e9627c49SStefano Zampini     if (color == 1) {
229e9627c49SStefano Zampini       ierr = KSPView(pcbddc->coarse_ksp,subviewer);CHKERRQ(ierr);
230e9627c49SStefano Zampini       ierr = PetscViewerFlush(subviewer);CHKERRQ(ierr);
231e9627c49SStefano Zampini     }
232e9627c49SStefano Zampini     ierr = PetscViewerRestoreSubViewer(viewer,PetscSubcommChild(subcomm),&subviewer);CHKERRQ(ierr);
233e9627c49SStefano Zampini     ierr = PetscSubcommDestroy(&subcomm);CHKERRQ(ierr);
234e9627c49SStefano Zampini     ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
235e9627c49SStefano Zampini   }
2366b78500eSPatrick Sanan   PetscFunctionReturn(0);
2376b78500eSPatrick Sanan }
238a13144ffSStefano Zampini 
239a13144ffSStefano Zampini #undef __FUNCT__
240a13144ffSStefano Zampini #define __FUNCT__ "PCBDDCSetDiscreteGradient_BDDC"
2411e0482f5SStefano Zampini static PetscErrorCode PCBDDCSetDiscreteGradient_BDDC(PC pc, Mat G, PetscInt order, PetscInt field, PetscBool global, PetscBool conforming)
242a13144ffSStefano Zampini {
243a13144ffSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
244a13144ffSStefano Zampini   PetscErrorCode ierr;
245a13144ffSStefano Zampini 
246a13144ffSStefano Zampini   PetscFunctionBegin;
247a13144ffSStefano Zampini   ierr = PetscObjectReference((PetscObject)G);CHKERRQ(ierr);
248a13144ffSStefano Zampini   ierr = MatDestroy(&pcbddc->discretegradient);CHKERRQ(ierr);
249a13144ffSStefano Zampini   pcbddc->discretegradient = G;
250a13144ffSStefano Zampini   pcbddc->nedorder         = order > 0 ? order : -order;
251495a2a07SStefano Zampini   pcbddc->nedfield         = field;
2521e0482f5SStefano Zampini   pcbddc->nedglobal        = global;
2531e0482f5SStefano Zampini   pcbddc->conforming       = conforming;
254a13144ffSStefano Zampini   PetscFunctionReturn(0);
255a13144ffSStefano Zampini }
256a13144ffSStefano Zampini 
257a13144ffSStefano Zampini #undef __FUNCT__
258a13144ffSStefano Zampini #define __FUNCT__ "PCBDDCSetDiscreteGradient"
259a13144ffSStefano Zampini /*@
260a13144ffSStefano Zampini  PCBDDCSetDiscreteGradient - Sets the discrete gradient
261a13144ffSStefano Zampini 
262a13144ffSStefano Zampini    Collective on PC
263a13144ffSStefano Zampini 
264a13144ffSStefano Zampini    Input Parameters:
265a13144ffSStefano Zampini +  pc         - the preconditioning context
266a13144ffSStefano Zampini .  G          - the discrete gradient matrix (should be in AIJ format)
267a13144ffSStefano Zampini .  order      - the order of the Nedelec space (1 for the lowest order)
268495a2a07SStefano Zampini .  field      - the field id of the Nedelec dofs (not used if the fields have not been specified)
2691e0482f5SStefano Zampini .  global     - the type of global ordering for the rows of G
270a13144ffSStefano Zampini -  conforming - whether the mesh is conforming or not
271a13144ffSStefano Zampini 
272a13144ffSStefano Zampini    Level: advanced
273a13144ffSStefano Zampini 
274a13144ffSStefano Zampini    Notes: The discrete gradient matrix G is used to analyze the subdomain edges, and it should not contain any zero entry.
275495a2a07SStefano Zampini           For variable order spaces, the order should be set to zero.
2761e0482f5SStefano Zampini           If global is true, the rows of G should be given in global ordering for the whole dofs;
2771e0482f5SStefano Zampini           if false, the ordering should be global for the Nedelec field.
2781e0482f5SStefano Zampini           In the latter case, it should hold gid[i] < gid[j] iff geid[i] < geid[j], with gid the global orderding for all the dofs
2791e0482f5SStefano Zampini           and geid the one for the Nedelec field.
280a13144ffSStefano Zampini 
281495a2a07SStefano Zampini .seealso: PCBDDC,PCBDDCSetDofsSplitting(),PCBDDCSetDofsSplittingLocal()
282a13144ffSStefano Zampini @*/
2831e0482f5SStefano Zampini PetscErrorCode PCBDDCSetDiscreteGradient(PC pc, Mat G, PetscInt order, PetscInt field, PetscBool global, PetscBool conforming)
284a13144ffSStefano Zampini {
285a13144ffSStefano Zampini   PetscErrorCode ierr;
286a13144ffSStefano Zampini 
287a13144ffSStefano Zampini   PetscFunctionBegin;
288a13144ffSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
289a13144ffSStefano Zampini   PetscValidHeaderSpecific(G,MAT_CLASSID,2);
290a13144ffSStefano Zampini   PetscValidLogicalCollectiveInt(pc,order,3);
2911e0482f5SStefano Zampini   PetscValidLogicalCollectiveInt(pc,field,4);
2921e0482f5SStefano Zampini   PetscValidLogicalCollectiveBool(pc,global,5);
2931e0482f5SStefano Zampini   PetscValidLogicalCollectiveBool(pc,conforming,6);
2941e0482f5SStefano Zampini   PetscCheckSameComm(pc,1,G,2);
2951e0482f5SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDiscreteGradient_C",(PC,Mat,PetscInt,PetscInt,PetscBool,PetscBool),(pc,G,order,field,global,conforming));CHKERRQ(ierr);
296a13144ffSStefano Zampini   PetscFunctionReturn(0);
297a13144ffSStefano Zampini }
298a13144ffSStefano Zampini 
299a198735bSStefano Zampini #undef __FUNCT__
300a198735bSStefano Zampini #define __FUNCT__ "PCBDDCSetDivergenceMat_BDDC"
3018ae0ca82SStefano Zampini static PetscErrorCode PCBDDCSetDivergenceMat_BDDC(PC pc, Mat divudotp, PetscBool trans, IS vl2l)
302a198735bSStefano Zampini {
303a198735bSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
304a198735bSStefano Zampini   PetscErrorCode ierr;
3056b78500eSPatrick Sanan 
306a198735bSStefano Zampini   PetscFunctionBegin;
307a198735bSStefano Zampini   ierr = PetscObjectReference((PetscObject)divudotp);CHKERRQ(ierr);
308a198735bSStefano Zampini   ierr = MatDestroy(&pcbddc->divudotp);CHKERRQ(ierr);
309a198735bSStefano Zampini   pcbddc->divudotp = divudotp;
3108ae0ca82SStefano Zampini   pcbddc->divudotp_trans = trans;
311a198735bSStefano Zampini   pcbddc->compute_nonetflux = PETSC_TRUE;
312a198735bSStefano Zampini   if (vl2l) {
313a198735bSStefano Zampini     ierr = PetscObjectReference((PetscObject)vl2l);CHKERRQ(ierr);
314fa23a32eSStefano Zampini     ierr = ISDestroy(&pcbddc->divudotp_vl2l);CHKERRQ(ierr);
315a198735bSStefano Zampini     pcbddc->divudotp_vl2l = vl2l;
316a198735bSStefano Zampini   }
317a198735bSStefano Zampini   PetscFunctionReturn(0);
318a198735bSStefano Zampini }
3193d996552SStefano Zampini 
320a198735bSStefano Zampini #undef __FUNCT__
321a198735bSStefano Zampini #define __FUNCT__ "PCBDDCSetDivergenceMat"
322a198735bSStefano Zampini /*@
323a198735bSStefano Zampini  PCBDDCSetDivergenceMat - Sets the linear operator representing \int_\Omega \div {\bf u} \cdot p dx
324a198735bSStefano Zampini 
325a198735bSStefano Zampini    Collective on PC
326a198735bSStefano Zampini 
327a198735bSStefano Zampini    Input Parameters:
328a198735bSStefano Zampini +  pc - the preconditioning context
329a198735bSStefano Zampini .  divudotp - the matrix (must be of type MATIS)
3308ae0ca82SStefano Zampini .  trans - if trans if false (resp. true), then pressures are in the test (trial) space and velocities are in the trial (test) space.
331bb05f991SStefano Zampini -  vl2l - optional IS describing the local (wrt the local mat in divudotp) to local (wrt the local mat in pc->pmat) map for the velocities
332a198735bSStefano Zampini 
333a198735bSStefano Zampini    Level: advanced
334a198735bSStefano Zampini 
3358ae0ca82SStefano Zampini    Notes: This auxiliary matrix is used to compute quadrature weights representing the net-flux across subdomain boundaries
336a198735bSStefano Zampini 
337a198735bSStefano Zampini .seealso: PCBDDC
338a198735bSStefano Zampini @*/
3398ae0ca82SStefano Zampini PetscErrorCode PCBDDCSetDivergenceMat(PC pc, Mat divudotp, PetscBool trans, IS vl2l)
340a198735bSStefano Zampini {
341a198735bSStefano Zampini   PetscBool      ismatis;
342a198735bSStefano Zampini   PetscErrorCode ierr;
343a198735bSStefano Zampini 
344a198735bSStefano Zampini   PetscFunctionBegin;
345a198735bSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
346a198735bSStefano Zampini   PetscValidHeaderSpecific(divudotp,MAT_CLASSID,2);
347a198735bSStefano Zampini   PetscCheckSameComm(pc,1,divudotp,2);
3488ae0ca82SStefano Zampini   PetscValidLogicalCollectiveBool(pc,trans,3);
3498ae0ca82SStefano Zampini   if (vl2l) PetscValidHeaderSpecific(divudotp,IS_CLASSID,4);
350a198735bSStefano Zampini   ierr = PetscObjectTypeCompare((PetscObject)divudotp,MATIS,&ismatis);CHKERRQ(ierr);
351a198735bSStefano Zampini   if (!ismatis) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_ARG_WRONG,"Divergence matrix needs to be of type MATIS");
3528ae0ca82SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDivergenceMat_C",(PC,Mat,PetscBool,IS),(pc,divudotp,trans,vl2l));CHKERRQ(ierr);
353a198735bSStefano Zampini   PetscFunctionReturn(0);
354a198735bSStefano Zampini }
3552d505d7fSStefano Zampini 
356674ae819SStefano Zampini #undef __FUNCT__
357906d46d4SStefano Zampini #define __FUNCT__ "PCBDDCSetChangeOfBasisMat_BDDC"
3581dd7afcfSStefano Zampini static PetscErrorCode PCBDDCSetChangeOfBasisMat_BDDC(PC pc, Mat change, PetscBool interior)
359b9b85e73SStefano Zampini {
360b9b85e73SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
361b9b85e73SStefano Zampini   PetscErrorCode ierr;
362b9b85e73SStefano Zampini 
363b9b85e73SStefano Zampini   PetscFunctionBegin;
364b9b85e73SStefano Zampini   ierr = PetscObjectReference((PetscObject)change);CHKERRQ(ierr);
36556282151SStefano Zampini   ierr = MatDestroy(&pcbddc->user_ChangeOfBasisMatrix);CHKERRQ(ierr);
366b9b85e73SStefano Zampini   pcbddc->user_ChangeOfBasisMatrix = change;
3671dd7afcfSStefano Zampini   pcbddc->change_interior = interior;
368b9b85e73SStefano Zampini   PetscFunctionReturn(0);
369b9b85e73SStefano Zampini }
370b9b85e73SStefano Zampini #undef __FUNCT__
371906d46d4SStefano Zampini #define __FUNCT__ "PCBDDCSetChangeOfBasisMat"
372b9b85e73SStefano Zampini /*@
373906d46d4SStefano Zampini  PCBDDCSetChangeOfBasisMat - Set user defined change of basis for dofs
374b9b85e73SStefano Zampini 
375b9b85e73SStefano Zampini    Collective on PC
376b9b85e73SStefano Zampini 
377b9b85e73SStefano Zampini    Input Parameters:
378b9b85e73SStefano Zampini +  pc - the preconditioning context
3791dd7afcfSStefano Zampini .  change - the change of basis matrix
3801dd7afcfSStefano Zampini -  interior - whether or not the change of basis modifies interior dofs
381b9b85e73SStefano Zampini 
382b9b85e73SStefano Zampini    Level: intermediate
383b9b85e73SStefano Zampini 
384b9b85e73SStefano Zampini    Notes:
385b9b85e73SStefano Zampini 
386b9b85e73SStefano Zampini .seealso: PCBDDC
387b9b85e73SStefano Zampini @*/
3881dd7afcfSStefano Zampini PetscErrorCode PCBDDCSetChangeOfBasisMat(PC pc, Mat change, PetscBool interior)
389b9b85e73SStefano Zampini {
390b9b85e73SStefano Zampini   PetscErrorCode ierr;
391b9b85e73SStefano Zampini 
392b9b85e73SStefano Zampini   PetscFunctionBegin;
393b9b85e73SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
394b9b85e73SStefano Zampini   PetscValidHeaderSpecific(change,MAT_CLASSID,2);
395906d46d4SStefano Zampini   PetscCheckSameComm(pc,1,change,2);
396906d46d4SStefano Zampini   if (pc->mat) {
397906d46d4SStefano Zampini     PetscInt rows_c,cols_c,rows,cols;
398906d46d4SStefano Zampini     ierr = MatGetSize(pc->mat,&rows,&cols);CHKERRQ(ierr);
399906d46d4SStefano Zampini     ierr = MatGetSize(change,&rows_c,&cols_c);CHKERRQ(ierr);
4006c4ed002SBarry Smith     if (rows_c != rows) SETERRQ2(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Invalid number of rows for change of basis matrix! %d != %d",rows_c,rows);
4016c4ed002SBarry Smith     if (cols_c != cols) SETERRQ2(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Invalid number of columns for change of basis matrix! %d != %d",cols_c,cols);
402906d46d4SStefano Zampini     ierr = MatGetLocalSize(pc->mat,&rows,&cols);CHKERRQ(ierr);
403906d46d4SStefano Zampini     ierr = MatGetLocalSize(change,&rows_c,&cols_c);CHKERRQ(ierr);
4046c4ed002SBarry Smith     if (rows_c != rows) SETERRQ2(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Invalid number of local rows for change of basis matrix! %d != %d",rows_c,rows);
4056c4ed002SBarry Smith     if (cols_c != cols) SETERRQ2(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Invalid number of local columns for change of basis matrix! %d != %d",cols_c,cols);
406906d46d4SStefano Zampini   }
4071dd7afcfSStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetChangeOfBasisMat_C",(PC,Mat,PetscBool),(pc,change,interior));CHKERRQ(ierr);
408b9b85e73SStefano Zampini   PetscFunctionReturn(0);
409b9b85e73SStefano Zampini }
4102d505d7fSStefano Zampini 
411b9b85e73SStefano Zampini #undef __FUNCT__
41230368db7SStefano Zampini #define __FUNCT__ "PCBDDCSetPrimalVerticesIS_BDDC"
41330368db7SStefano Zampini static PetscErrorCode PCBDDCSetPrimalVerticesIS_BDDC(PC pc, IS PrimalVertices)
41430368db7SStefano Zampini {
41530368db7SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
41656282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
41730368db7SStefano Zampini   PetscErrorCode ierr;
41830368db7SStefano Zampini 
41930368db7SStefano Zampini   PetscFunctionBegin;
42056282151SStefano Zampini   ierr = PetscObjectReference((PetscObject)PrimalVertices);CHKERRQ(ierr);
42156282151SStefano Zampini   if (pcbddc->user_primal_vertices) {
42256282151SStefano Zampini     ierr = ISEqual(PrimalVertices,pcbddc->user_primal_vertices,&isequal);CHKERRQ(ierr);
42356282151SStefano Zampini   }
42430368db7SStefano Zampini   ierr = ISDestroy(&pcbddc->user_primal_vertices);CHKERRQ(ierr);
42530368db7SStefano Zampini   ierr = ISDestroy(&pcbddc->user_primal_vertices_local);CHKERRQ(ierr);
42630368db7SStefano Zampini   pcbddc->user_primal_vertices = PrimalVertices;
42756282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
42830368db7SStefano Zampini   PetscFunctionReturn(0);
42930368db7SStefano Zampini }
43030368db7SStefano Zampini #undef __FUNCT__
43130368db7SStefano Zampini #define __FUNCT__ "PCBDDCSetPrimalVerticesIS"
43230368db7SStefano Zampini /*@
43330368db7SStefano Zampini  PCBDDCSetPrimalVerticesIS - Set additional user defined primal vertices in PCBDDC
43430368db7SStefano Zampini 
43530368db7SStefano Zampini    Collective
43630368db7SStefano Zampini 
43730368db7SStefano Zampini    Input Parameters:
43830368db7SStefano Zampini +  pc - the preconditioning context
43930368db7SStefano Zampini -  PrimalVertices - index set of primal vertices in global numbering (can be empty)
44030368db7SStefano Zampini 
44130368db7SStefano Zampini    Level: intermediate
44230368db7SStefano Zampini 
44330368db7SStefano Zampini    Notes:
44430368db7SStefano Zampini      Any process can list any global node
44530368db7SStefano Zampini 
44630368db7SStefano Zampini .seealso: PCBDDC
44730368db7SStefano Zampini @*/
44830368db7SStefano Zampini PetscErrorCode PCBDDCSetPrimalVerticesIS(PC pc, IS PrimalVertices)
44930368db7SStefano Zampini {
45030368db7SStefano Zampini   PetscErrorCode ierr;
45130368db7SStefano Zampini 
45230368db7SStefano Zampini   PetscFunctionBegin;
45330368db7SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
45430368db7SStefano Zampini   PetscValidHeaderSpecific(PrimalVertices,IS_CLASSID,2);
45530368db7SStefano Zampini   PetscCheckSameComm(pc,1,PrimalVertices,2);
45630368db7SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetPrimalVerticesIS_C",(PC,IS),(pc,PrimalVertices));CHKERRQ(ierr);
45730368db7SStefano Zampini   PetscFunctionReturn(0);
45830368db7SStefano Zampini }
4592d505d7fSStefano Zampini 
46030368db7SStefano Zampini #undef __FUNCT__
461674ae819SStefano Zampini #define __FUNCT__ "PCBDDCSetPrimalVerticesLocalIS_BDDC"
462674ae819SStefano Zampini static PetscErrorCode PCBDDCSetPrimalVerticesLocalIS_BDDC(PC pc, IS PrimalVertices)
463674ae819SStefano Zampini {
464674ae819SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
46556282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
466674ae819SStefano Zampini   PetscErrorCode ierr;
4671e6b0712SBarry Smith 
468674ae819SStefano Zampini   PetscFunctionBegin;
46956282151SStefano Zampini   ierr = PetscObjectReference((PetscObject)PrimalVertices);CHKERRQ(ierr);
47056282151SStefano Zampini   if (pcbddc->user_primal_vertices_local) {
47156282151SStefano Zampini     ierr = ISEqual(PrimalVertices,pcbddc->user_primal_vertices_local,&isequal);CHKERRQ(ierr);
47256282151SStefano Zampini   }
473674ae819SStefano Zampini   ierr = ISDestroy(&pcbddc->user_primal_vertices);CHKERRQ(ierr);
47430368db7SStefano Zampini   ierr = ISDestroy(&pcbddc->user_primal_vertices_local);CHKERRQ(ierr);
47530368db7SStefano Zampini   pcbddc->user_primal_vertices_local = PrimalVertices;
47656282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
477674ae819SStefano Zampini   PetscFunctionReturn(0);
478674ae819SStefano Zampini }
479674ae819SStefano Zampini #undef __FUNCT__
480674ae819SStefano Zampini #define __FUNCT__ "PCBDDCSetPrimalVerticesLocalIS"
481674ae819SStefano Zampini /*@
48228509bceSStefano Zampini  PCBDDCSetPrimalVerticesLocalIS - Set additional user defined primal vertices in PCBDDC
483674ae819SStefano Zampini 
48417eb1463SStefano Zampini    Collective
485674ae819SStefano Zampini 
486674ae819SStefano Zampini    Input Parameters:
487674ae819SStefano Zampini +  pc - the preconditioning context
48817eb1463SStefano Zampini -  PrimalVertices - index set of primal vertices in local numbering (can be empty)
489674ae819SStefano Zampini 
490674ae819SStefano Zampini    Level: intermediate
491674ae819SStefano Zampini 
492674ae819SStefano Zampini    Notes:
493674ae819SStefano Zampini 
494674ae819SStefano Zampini .seealso: PCBDDC
495674ae819SStefano Zampini @*/
496674ae819SStefano Zampini PetscErrorCode PCBDDCSetPrimalVerticesLocalIS(PC pc, IS PrimalVertices)
497674ae819SStefano Zampini {
498674ae819SStefano Zampini   PetscErrorCode ierr;
499674ae819SStefano Zampini 
500674ae819SStefano Zampini   PetscFunctionBegin;
501674ae819SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
502674ae819SStefano Zampini   PetscValidHeaderSpecific(PrimalVertices,IS_CLASSID,2);
50317eb1463SStefano Zampini   PetscCheckSameComm(pc,1,PrimalVertices,2);
504674ae819SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetPrimalVerticesLocalIS_C",(PC,IS),(pc,PrimalVertices));CHKERRQ(ierr);
505674ae819SStefano Zampini   PetscFunctionReturn(0);
506674ae819SStefano Zampini }
5072d505d7fSStefano Zampini 
5080c7d97c5SJed Brown #undef __FUNCT__
5094fad6a16SStefano Zampini #define __FUNCT__ "PCBDDCSetCoarseningRatio_BDDC"
5104fad6a16SStefano Zampini static PetscErrorCode PCBDDCSetCoarseningRatio_BDDC(PC pc,PetscInt k)
5114fad6a16SStefano Zampini {
5124fad6a16SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
5134fad6a16SStefano Zampini 
5144fad6a16SStefano Zampini   PetscFunctionBegin;
5154fad6a16SStefano Zampini   pcbddc->coarsening_ratio = k;
5164fad6a16SStefano Zampini   PetscFunctionReturn(0);
5174fad6a16SStefano Zampini }
5181e6b0712SBarry Smith 
5194fad6a16SStefano Zampini #undef __FUNCT__
5204fad6a16SStefano Zampini #define __FUNCT__ "PCBDDCSetCoarseningRatio"
5214fad6a16SStefano Zampini /*@
52228509bceSStefano Zampini  PCBDDCSetCoarseningRatio - Set coarsening ratio used in multilevel
5234fad6a16SStefano Zampini 
5244fad6a16SStefano Zampini    Logically collective on PC
5254fad6a16SStefano Zampini 
5264fad6a16SStefano Zampini    Input Parameters:
5274fad6a16SStefano Zampini +  pc - the preconditioning context
52828509bceSStefano Zampini -  k - coarsening ratio (H/h at the coarser level)
5294fad6a16SStefano Zampini 
5300f202f7eSStefano Zampini    Options Database Keys:
5310f202f7eSStefano Zampini .    -pc_bddc_coarsening_ratio
5324fad6a16SStefano Zampini 
5334fad6a16SStefano Zampini    Level: intermediate
5344fad6a16SStefano Zampini 
5354fad6a16SStefano Zampini    Notes:
5360f202f7eSStefano Zampini      Approximatively k subdomains at the finer level will be aggregated into a single subdomain at the coarser level
5374fad6a16SStefano Zampini 
5380f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetLevels()
5394fad6a16SStefano Zampini @*/
5404fad6a16SStefano Zampini PetscErrorCode PCBDDCSetCoarseningRatio(PC pc,PetscInt k)
5414fad6a16SStefano Zampini {
5424fad6a16SStefano Zampini   PetscErrorCode ierr;
5434fad6a16SStefano Zampini 
5444fad6a16SStefano Zampini   PetscFunctionBegin;
5454fad6a16SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
5462b510759SStefano Zampini   PetscValidLogicalCollectiveInt(pc,k,2);
5474fad6a16SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetCoarseningRatio_C",(PC,PetscInt),(pc,k));CHKERRQ(ierr);
5484fad6a16SStefano Zampini   PetscFunctionReturn(0);
5494fad6a16SStefano Zampini }
5502b510759SStefano Zampini 
551b8ffe317SStefano Zampini /* The following functions (PCBDDCSetUseExactDirichlet PCBDDCSetLevel) are not public */
5522b510759SStefano Zampini #undef __FUNCT__
553b8ffe317SStefano Zampini #define __FUNCT__ "PCBDDCSetUseExactDirichlet_BDDC"
554b8ffe317SStefano Zampini static PetscErrorCode PCBDDCSetUseExactDirichlet_BDDC(PC pc,PetscBool flg)
555b8ffe317SStefano Zampini {
556b8ffe317SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
557b8ffe317SStefano Zampini 
558b8ffe317SStefano Zampini   PetscFunctionBegin;
55985c4d303SStefano Zampini   pcbddc->use_exact_dirichlet_trick = flg;
560b8ffe317SStefano Zampini   PetscFunctionReturn(0);
561b8ffe317SStefano Zampini }
562b8ffe317SStefano Zampini 
563b8ffe317SStefano Zampini #undef __FUNCT__
564b8ffe317SStefano Zampini #define __FUNCT__ "PCBDDCSetUseExactDirichlet"
565b8ffe317SStefano Zampini PetscErrorCode PCBDDCSetUseExactDirichlet(PC pc,PetscBool flg)
5662b510759SStefano Zampini {
5672b510759SStefano Zampini   PetscErrorCode ierr;
5682b510759SStefano Zampini 
5692b510759SStefano Zampini   PetscFunctionBegin;
5702b510759SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
571b8ffe317SStefano Zampini   PetscValidLogicalCollectiveBool(pc,flg,2);
572b8ffe317SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetUseExactDirichlet_C",(PC,PetscBool),(pc,flg));CHKERRQ(ierr);
5732b510759SStefano Zampini   PetscFunctionReturn(0);
5742b510759SStefano Zampini }
5751e6b0712SBarry Smith 
5764fad6a16SStefano Zampini #undef __FUNCT__
5772b510759SStefano Zampini #define __FUNCT__ "PCBDDCSetLevel_BDDC"
5782b510759SStefano Zampini static PetscErrorCode PCBDDCSetLevel_BDDC(PC pc,PetscInt level)
5794fad6a16SStefano Zampini {
5804fad6a16SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
5814fad6a16SStefano Zampini 
5824fad6a16SStefano Zampini   PetscFunctionBegin;
5832b510759SStefano Zampini   pcbddc->current_level = level;
5844fad6a16SStefano Zampini   PetscFunctionReturn(0);
5854fad6a16SStefano Zampini }
5861e6b0712SBarry Smith 
5874fad6a16SStefano Zampini #undef __FUNCT__
588b8ffe317SStefano Zampini #define __FUNCT__ "PCBDDCSetLevel"
589b8ffe317SStefano Zampini PetscErrorCode PCBDDCSetLevel(PC pc,PetscInt level)
590b8ffe317SStefano Zampini {
591b8ffe317SStefano Zampini   PetscErrorCode ierr;
592b8ffe317SStefano Zampini 
593b8ffe317SStefano Zampini   PetscFunctionBegin;
594b8ffe317SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
595b8ffe317SStefano Zampini   PetscValidLogicalCollectiveInt(pc,level,2);
596b8ffe317SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetLevel_C",(PC,PetscInt),(pc,level));CHKERRQ(ierr);
597b8ffe317SStefano Zampini   PetscFunctionReturn(0);
598b8ffe317SStefano Zampini }
599b8ffe317SStefano Zampini 
600b8ffe317SStefano Zampini #undef __FUNCT__
6012b510759SStefano Zampini #define __FUNCT__ "PCBDDCSetLevels_BDDC"
6022b510759SStefano Zampini static PetscErrorCode PCBDDCSetLevels_BDDC(PC pc,PetscInt levels)
6032b510759SStefano Zampini {
6042b510759SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
6052b510759SStefano Zampini 
6062b510759SStefano Zampini   PetscFunctionBegin;
6072b510759SStefano Zampini   pcbddc->max_levels = levels;
6082b510759SStefano Zampini   PetscFunctionReturn(0);
6092b510759SStefano Zampini }
6102b510759SStefano Zampini 
6112b510759SStefano Zampini #undef __FUNCT__
6122b510759SStefano Zampini #define __FUNCT__ "PCBDDCSetLevels"
6134fad6a16SStefano Zampini /*@
61428509bceSStefano Zampini  PCBDDCSetLevels - Sets the maximum number of levels for multilevel
6154fad6a16SStefano Zampini 
6164fad6a16SStefano Zampini    Logically collective on PC
6174fad6a16SStefano Zampini 
6184fad6a16SStefano Zampini    Input Parameters:
6194fad6a16SStefano Zampini +  pc - the preconditioning context
62028509bceSStefano Zampini -  levels - the maximum number of levels (max 9)
6214fad6a16SStefano Zampini 
6220f202f7eSStefano Zampini    Options Database Keys:
6230f202f7eSStefano Zampini .    -pc_bddc_levels
6244fad6a16SStefano Zampini 
6254fad6a16SStefano Zampini    Level: intermediate
6264fad6a16SStefano Zampini 
6274fad6a16SStefano Zampini    Notes:
6280f202f7eSStefano Zampini      Default value is 0, i.e. traditional one-level BDDC
6294fad6a16SStefano Zampini 
6300f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetCoarseningRatio()
6314fad6a16SStefano Zampini @*/
6322b510759SStefano Zampini PetscErrorCode PCBDDCSetLevels(PC pc,PetscInt levels)
6334fad6a16SStefano Zampini {
6344fad6a16SStefano Zampini   PetscErrorCode ierr;
6354fad6a16SStefano Zampini 
6364fad6a16SStefano Zampini   PetscFunctionBegin;
6374fad6a16SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
6382b510759SStefano Zampini   PetscValidLogicalCollectiveInt(pc,levels,2);
639312be037SStefano Zampini   if (levels > 99) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Maximum number of levels for bddc is 99\n");
6402b510759SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetLevels_C",(PC,PetscInt),(pc,levels));CHKERRQ(ierr);
6414fad6a16SStefano Zampini   PetscFunctionReturn(0);
6424fad6a16SStefano Zampini }
6431e6b0712SBarry Smith 
6444fad6a16SStefano Zampini #undef __FUNCT__
6453b03a366Sstefano_zampini #define __FUNCT__ "PCBDDCSetDirichletBoundaries_BDDC"
6463b03a366Sstefano_zampini static PetscErrorCode PCBDDCSetDirichletBoundaries_BDDC(PC pc,IS DirichletBoundaries)
6473b03a366Sstefano_zampini {
6483b03a366Sstefano_zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
64956282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
6503b03a366Sstefano_zampini   PetscErrorCode ierr;
6513b03a366Sstefano_zampini 
6523b03a366Sstefano_zampini   PetscFunctionBegin;
65356282151SStefano Zampini   ierr = PetscObjectReference((PetscObject)DirichletBoundaries);CHKERRQ(ierr);
65456282151SStefano Zampini   if (pcbddc->DirichletBoundaries) {
65556282151SStefano Zampini     ierr = ISEqual(DirichletBoundaries,pcbddc->DirichletBoundaries,&isequal);CHKERRQ(ierr);
65656282151SStefano Zampini   }
657785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
658785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->DirichletBoundariesLocal);CHKERRQ(ierr);
6593b03a366Sstefano_zampini   ierr = ISDestroy(&pcbddc->DirichletBoundaries);CHKERRQ(ierr);
66036e030ebSStefano Zampini   pcbddc->DirichletBoundaries = DirichletBoundaries;
66156282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
6623b03a366Sstefano_zampini   PetscFunctionReturn(0);
6633b03a366Sstefano_zampini }
6641e6b0712SBarry Smith 
6653b03a366Sstefano_zampini #undef __FUNCT__
6663b03a366Sstefano_zampini #define __FUNCT__ "PCBDDCSetDirichletBoundaries"
6673b03a366Sstefano_zampini /*@
66828509bceSStefano Zampini  PCBDDCSetDirichletBoundaries - Set IS defining Dirichlet boundaries for the global problem.
6693b03a366Sstefano_zampini 
670785d1243SStefano Zampini    Collective
6713b03a366Sstefano_zampini 
6723b03a366Sstefano_zampini    Input Parameters:
6733b03a366Sstefano_zampini +  pc - the preconditioning context
674785d1243SStefano Zampini -  DirichletBoundaries - parallel IS defining the Dirichlet boundaries
6753b03a366Sstefano_zampini 
6763b03a366Sstefano_zampini    Level: intermediate
6773b03a366Sstefano_zampini 
6780f202f7eSStefano Zampini    Notes:
6790f202f7eSStefano Zampini      Provide the information if you used MatZeroRows/Columns routines. Any process can list any global node
6803b03a366Sstefano_zampini 
6810f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetDirichletBoundariesLocal(), MatZeroRows(), MatZeroRowsColumns()
6823b03a366Sstefano_zampini @*/
6833b03a366Sstefano_zampini PetscErrorCode PCBDDCSetDirichletBoundaries(PC pc,IS DirichletBoundaries)
6843b03a366Sstefano_zampini {
6853b03a366Sstefano_zampini   PetscErrorCode ierr;
6863b03a366Sstefano_zampini 
6873b03a366Sstefano_zampini   PetscFunctionBegin;
6883b03a366Sstefano_zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
689674ae819SStefano Zampini   PetscValidHeaderSpecific(DirichletBoundaries,IS_CLASSID,2);
690785d1243SStefano Zampini   PetscCheckSameComm(pc,1,DirichletBoundaries,2);
6913b03a366Sstefano_zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDirichletBoundaries_C",(PC,IS),(pc,DirichletBoundaries));CHKERRQ(ierr);
6923b03a366Sstefano_zampini   PetscFunctionReturn(0);
6933b03a366Sstefano_zampini }
6941e6b0712SBarry Smith 
6953b03a366Sstefano_zampini #undef __FUNCT__
69682ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCSetDirichletBoundariesLocal_BDDC"
69782ba6b80SStefano Zampini static PetscErrorCode PCBDDCSetDirichletBoundariesLocal_BDDC(PC pc,IS DirichletBoundaries)
6980c7d97c5SJed Brown {
6990c7d97c5SJed Brown   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
70056282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
7010c7d97c5SJed Brown   PetscErrorCode ierr;
7020c7d97c5SJed Brown 
7030c7d97c5SJed Brown   PetscFunctionBegin;
70456282151SStefano Zampini   ierr = PetscObjectReference((PetscObject)DirichletBoundaries);CHKERRQ(ierr);
70556282151SStefano Zampini   if (pcbddc->DirichletBoundariesLocal) {
70656282151SStefano Zampini     ierr = ISEqual(DirichletBoundaries,pcbddc->DirichletBoundariesLocal,&isequal);CHKERRQ(ierr);
70756282151SStefano Zampini   }
708785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
709785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->DirichletBoundariesLocal);CHKERRQ(ierr);
7100c7d97c5SJed Brown   ierr = ISDestroy(&pcbddc->DirichletBoundaries);CHKERRQ(ierr);
711785d1243SStefano Zampini   pcbddc->DirichletBoundariesLocal = DirichletBoundaries;
71256282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
7130c7d97c5SJed Brown   PetscFunctionReturn(0);
7140c7d97c5SJed Brown }
7150c7d97c5SJed Brown 
7160c7d97c5SJed Brown #undef __FUNCT__
71782ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCSetDirichletBoundariesLocal"
7189c0446d6SStefano Zampini /*@
71982ba6b80SStefano Zampini  PCBDDCSetDirichletBoundariesLocal - Set IS defining Dirichlet boundaries for the global problem in local ordering.
7209c0446d6SStefano Zampini 
721785d1243SStefano Zampini    Collective
72253cdbc3dSStefano Zampini 
72353cdbc3dSStefano Zampini    Input Parameters:
72453cdbc3dSStefano Zampini +  pc - the preconditioning context
72582ba6b80SStefano Zampini -  DirichletBoundaries - parallel IS defining the Dirichlet boundaries (in local ordering)
72653cdbc3dSStefano Zampini 
72753cdbc3dSStefano Zampini    Level: intermediate
72853cdbc3dSStefano Zampini 
7299c0446d6SStefano Zampini    Notes:
73053cdbc3dSStefano Zampini 
7310f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetDirichletBoundaries(), MatZeroRows(), MatZeroRowsColumns()
73253cdbc3dSStefano Zampini @*/
73382ba6b80SStefano Zampini PetscErrorCode PCBDDCSetDirichletBoundariesLocal(PC pc,IS DirichletBoundaries)
7340c7d97c5SJed Brown {
7350c7d97c5SJed Brown   PetscErrorCode ierr;
7360c7d97c5SJed Brown 
7370c7d97c5SJed Brown   PetscFunctionBegin;
7380c7d97c5SJed Brown   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
7390c7d97c5SJed Brown   PetscValidHeaderSpecific(DirichletBoundaries,IS_CLASSID,2);
74082ba6b80SStefano Zampini   PetscCheckSameComm(pc,1,DirichletBoundaries,2);
74182ba6b80SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDirichletBoundariesLocal_C",(PC,IS),(pc,DirichletBoundaries));CHKERRQ(ierr);
7420c7d97c5SJed Brown   PetscFunctionReturn(0);
7430c7d97c5SJed Brown }
7440c7d97c5SJed Brown 
7450c7d97c5SJed Brown #undef __FUNCT__
7460c7d97c5SJed Brown #define __FUNCT__ "PCBDDCSetNeumannBoundaries_BDDC"
74753cdbc3dSStefano Zampini static PetscErrorCode PCBDDCSetNeumannBoundaries_BDDC(PC pc,IS NeumannBoundaries)
7480c7d97c5SJed Brown {
7490c7d97c5SJed Brown   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
75056282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
75153cdbc3dSStefano Zampini   PetscErrorCode ierr;
7520c7d97c5SJed Brown 
7530c7d97c5SJed Brown   PetscFunctionBegin;
75456282151SStefano Zampini   ierr = PetscObjectReference((PetscObject)NeumannBoundaries);CHKERRQ(ierr);
75556282151SStefano Zampini   if (pcbddc->NeumannBoundaries) {
75656282151SStefano Zampini     ierr = ISEqual(NeumannBoundaries,pcbddc->NeumannBoundaries,&isequal);CHKERRQ(ierr);
75756282151SStefano Zampini   }
758785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
759785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->NeumannBoundariesLocal);CHKERRQ(ierr);
76053cdbc3dSStefano Zampini   ierr = ISDestroy(&pcbddc->NeumannBoundaries);CHKERRQ(ierr);
76136e030ebSStefano Zampini   pcbddc->NeumannBoundaries = NeumannBoundaries;
76256282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
7630c7d97c5SJed Brown   PetscFunctionReturn(0);
7640c7d97c5SJed Brown }
7651e6b0712SBarry Smith 
7660c7d97c5SJed Brown #undef __FUNCT__
7670c7d97c5SJed Brown #define __FUNCT__ "PCBDDCSetNeumannBoundaries"
76857527edcSJed Brown /*@
76928509bceSStefano Zampini  PCBDDCSetNeumannBoundaries - Set IS defining Neumann boundaries for the global problem.
77057527edcSJed Brown 
771785d1243SStefano Zampini    Collective
77257527edcSJed Brown 
77357527edcSJed Brown    Input Parameters:
77457527edcSJed Brown +  pc - the preconditioning context
775785d1243SStefano Zampini -  NeumannBoundaries - parallel IS defining the Neumann boundaries
77657527edcSJed Brown 
77757527edcSJed Brown    Level: intermediate
77857527edcSJed Brown 
7790f202f7eSStefano Zampini    Notes:
7800f202f7eSStefano Zampini      Any process can list any global node
78157527edcSJed Brown 
7820f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetNeumannBoundariesLocal()
78357527edcSJed Brown @*/
78453cdbc3dSStefano Zampini PetscErrorCode PCBDDCSetNeumannBoundaries(PC pc,IS NeumannBoundaries)
7850c7d97c5SJed Brown {
7860c7d97c5SJed Brown   PetscErrorCode ierr;
7870c7d97c5SJed Brown 
7880c7d97c5SJed Brown   PetscFunctionBegin;
7890c7d97c5SJed Brown   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
790674ae819SStefano Zampini   PetscValidHeaderSpecific(NeumannBoundaries,IS_CLASSID,2);
791785d1243SStefano Zampini   PetscCheckSameComm(pc,1,NeumannBoundaries,2);
79253cdbc3dSStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetNeumannBoundaries_C",(PC,IS),(pc,NeumannBoundaries));CHKERRQ(ierr);
79353cdbc3dSStefano Zampini   PetscFunctionReturn(0);
79453cdbc3dSStefano Zampini }
7951e6b0712SBarry Smith 
79653cdbc3dSStefano Zampini #undef __FUNCT__
79782ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCSetNeumannBoundariesLocal_BDDC"
79882ba6b80SStefano Zampini static PetscErrorCode PCBDDCSetNeumannBoundariesLocal_BDDC(PC pc,IS NeumannBoundaries)
7990c7d97c5SJed Brown {
8000c7d97c5SJed Brown   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
80156282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
8020c7d97c5SJed Brown   PetscErrorCode ierr;
8030c7d97c5SJed Brown 
8040c7d97c5SJed Brown   PetscFunctionBegin;
80556282151SStefano Zampini   ierr = PetscObjectReference((PetscObject)NeumannBoundaries);CHKERRQ(ierr);
80656282151SStefano Zampini   if (pcbddc->NeumannBoundariesLocal) {
80756282151SStefano Zampini     ierr = ISEqual(NeumannBoundaries,pcbddc->NeumannBoundariesLocal,&isequal);CHKERRQ(ierr);
80856282151SStefano Zampini   }
809785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
810785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->NeumannBoundariesLocal);CHKERRQ(ierr);
8110c7d97c5SJed Brown   ierr = ISDestroy(&pcbddc->NeumannBoundaries);CHKERRQ(ierr);
812785d1243SStefano Zampini   pcbddc->NeumannBoundariesLocal = NeumannBoundaries;
81356282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
8140c7d97c5SJed Brown   PetscFunctionReturn(0);
8150c7d97c5SJed Brown }
8160c7d97c5SJed Brown 
8170c7d97c5SJed Brown #undef __FUNCT__
81882ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCSetNeumannBoundariesLocal"
8190c7d97c5SJed Brown /*@
82082ba6b80SStefano Zampini  PCBDDCSetNeumannBoundariesLocal - Set IS defining Neumann boundaries for the global problem in local ordering.
8210c7d97c5SJed Brown 
822785d1243SStefano Zampini    Collective
8230c7d97c5SJed Brown 
8240c7d97c5SJed Brown    Input Parameters:
8250c7d97c5SJed Brown +  pc - the preconditioning context
82682ba6b80SStefano Zampini -  NeumannBoundaries - parallel IS defining the subdomain part of Neumann boundaries (in local ordering)
8270c7d97c5SJed Brown 
8280c7d97c5SJed Brown    Level: intermediate
8290c7d97c5SJed Brown 
8300c7d97c5SJed Brown    Notes:
8310c7d97c5SJed Brown 
8320f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetNeumannBoundaries()
8330c7d97c5SJed Brown @*/
83482ba6b80SStefano Zampini PetscErrorCode PCBDDCSetNeumannBoundariesLocal(PC pc,IS NeumannBoundaries)
8350c7d97c5SJed Brown {
8360c7d97c5SJed Brown   PetscErrorCode ierr;
8370c7d97c5SJed Brown 
8380c7d97c5SJed Brown   PetscFunctionBegin;
8390c7d97c5SJed Brown   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
8400c7d97c5SJed Brown   PetscValidHeaderSpecific(NeumannBoundaries,IS_CLASSID,2);
84182ba6b80SStefano Zampini   PetscCheckSameComm(pc,1,NeumannBoundaries,2);
84282ba6b80SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetNeumannBoundariesLocal_C",(PC,IS),(pc,NeumannBoundaries));CHKERRQ(ierr);
84353cdbc3dSStefano Zampini   PetscFunctionReturn(0);
84453cdbc3dSStefano Zampini }
84553cdbc3dSStefano Zampini 
84653cdbc3dSStefano Zampini #undef __FUNCT__
847da1bb401SStefano Zampini #define __FUNCT__ "PCBDDCGetDirichletBoundaries_BDDC"
848da1bb401SStefano Zampini static PetscErrorCode PCBDDCGetDirichletBoundaries_BDDC(PC pc,IS *DirichletBoundaries)
849da1bb401SStefano Zampini {
850da1bb401SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
851da1bb401SStefano Zampini 
852da1bb401SStefano Zampini   PetscFunctionBegin;
853da1bb401SStefano Zampini   *DirichletBoundaries = pcbddc->DirichletBoundaries;
854da1bb401SStefano Zampini   PetscFunctionReturn(0);
855da1bb401SStefano Zampini }
8561e6b0712SBarry Smith 
857da1bb401SStefano Zampini #undef __FUNCT__
858da1bb401SStefano Zampini #define __FUNCT__ "PCBDDCGetDirichletBoundaries"
859da1bb401SStefano Zampini /*@
860785d1243SStefano Zampini  PCBDDCGetDirichletBoundaries - Get parallel IS for Dirichlet boundaries
861da1bb401SStefano Zampini 
862785d1243SStefano Zampini    Collective
863785d1243SStefano Zampini 
864785d1243SStefano Zampini    Input Parameters:
865785d1243SStefano Zampini .  pc - the preconditioning context
866785d1243SStefano Zampini 
867785d1243SStefano Zampini    Output Parameters:
868785d1243SStefano Zampini .  DirichletBoundaries - index set defining the Dirichlet boundaries
869785d1243SStefano Zampini 
870785d1243SStefano Zampini    Level: intermediate
871785d1243SStefano Zampini 
8720f202f7eSStefano Zampini    Notes:
8730f202f7eSStefano Zampini      The IS returned (if any) is the same passed in earlier by the user with PCBDDCSetDirichletBoundaries
874785d1243SStefano Zampini 
875785d1243SStefano Zampini .seealso: PCBDDC
876785d1243SStefano Zampini @*/
877785d1243SStefano Zampini PetscErrorCode PCBDDCGetDirichletBoundaries(PC pc,IS *DirichletBoundaries)
878785d1243SStefano Zampini {
879785d1243SStefano Zampini   PetscErrorCode ierr;
880785d1243SStefano Zampini 
881785d1243SStefano Zampini   PetscFunctionBegin;
882785d1243SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
883785d1243SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetDirichletBoundaries_C",(PC,IS*),(pc,DirichletBoundaries));CHKERRQ(ierr);
884785d1243SStefano Zampini   PetscFunctionReturn(0);
885785d1243SStefano Zampini }
886785d1243SStefano Zampini 
887785d1243SStefano Zampini #undef __FUNCT__
888785d1243SStefano Zampini #define __FUNCT__ "PCBDDCGetDirichletBoundariesLocal_BDDC"
889785d1243SStefano Zampini static PetscErrorCode PCBDDCGetDirichletBoundariesLocal_BDDC(PC pc,IS *DirichletBoundaries)
890785d1243SStefano Zampini {
891785d1243SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
892785d1243SStefano Zampini 
893785d1243SStefano Zampini   PetscFunctionBegin;
894785d1243SStefano Zampini   *DirichletBoundaries = pcbddc->DirichletBoundariesLocal;
895785d1243SStefano Zampini   PetscFunctionReturn(0);
896785d1243SStefano Zampini }
897785d1243SStefano Zampini 
898785d1243SStefano Zampini #undef __FUNCT__
89982ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCGetDirichletBoundariesLocal"
900da1bb401SStefano Zampini /*@
90182ba6b80SStefano Zampini  PCBDDCGetDirichletBoundariesLocal - Get parallel IS for Dirichlet boundaries (in local ordering)
902da1bb401SStefano Zampini 
903785d1243SStefano Zampini    Collective
904da1bb401SStefano Zampini 
905da1bb401SStefano Zampini    Input Parameters:
90628509bceSStefano Zampini .  pc - the preconditioning context
907da1bb401SStefano Zampini 
908da1bb401SStefano Zampini    Output Parameters:
90928509bceSStefano Zampini .  DirichletBoundaries - index set defining the subdomain part of Dirichlet boundaries
910da1bb401SStefano Zampini 
911da1bb401SStefano Zampini    Level: intermediate
912da1bb401SStefano Zampini 
913da1bb401SStefano Zampini    Notes:
9140f202f7eSStefano Zampini      The IS returned could be the same passed in earlier by the user (if provided with PCBDDCSetDirichletBoundariesLocal) or a global-to-local map of the global IS (if provided with PCBDDCSetDirichletBoundaries).
9150f202f7eSStefano Zampini           In the latter case, the IS will be available after PCSetUp.
916da1bb401SStefano Zampini 
917da1bb401SStefano Zampini .seealso: PCBDDC
918da1bb401SStefano Zampini @*/
91982ba6b80SStefano Zampini PetscErrorCode PCBDDCGetDirichletBoundariesLocal(PC pc,IS *DirichletBoundaries)
920da1bb401SStefano Zampini {
921da1bb401SStefano Zampini   PetscErrorCode ierr;
922da1bb401SStefano Zampini 
923da1bb401SStefano Zampini   PetscFunctionBegin;
924da1bb401SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
92582ba6b80SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetDirichletBoundariesLocal_C",(PC,IS*),(pc,DirichletBoundaries));CHKERRQ(ierr);
926da1bb401SStefano Zampini   PetscFunctionReturn(0);
927da1bb401SStefano Zampini }
9281e6b0712SBarry Smith 
929da1bb401SStefano Zampini #undef __FUNCT__
93053cdbc3dSStefano Zampini #define __FUNCT__ "PCBDDCGetNeumannBoundaries_BDDC"
93153cdbc3dSStefano Zampini static PetscErrorCode PCBDDCGetNeumannBoundaries_BDDC(PC pc,IS *NeumannBoundaries)
93253cdbc3dSStefano Zampini {
93353cdbc3dSStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
93453cdbc3dSStefano Zampini 
93553cdbc3dSStefano Zampini   PetscFunctionBegin;
93653cdbc3dSStefano Zampini   *NeumannBoundaries = pcbddc->NeumannBoundaries;
93753cdbc3dSStefano Zampini   PetscFunctionReturn(0);
93853cdbc3dSStefano Zampini }
9391e6b0712SBarry Smith 
94053cdbc3dSStefano Zampini #undef __FUNCT__
94153cdbc3dSStefano Zampini #define __FUNCT__ "PCBDDCGetNeumannBoundaries"
94253cdbc3dSStefano Zampini /*@
943785d1243SStefano Zampini  PCBDDCGetNeumannBoundaries - Get parallel IS for Neumann boundaries
94453cdbc3dSStefano Zampini 
945785d1243SStefano Zampini    Collective
946785d1243SStefano Zampini 
947785d1243SStefano Zampini    Input Parameters:
948785d1243SStefano Zampini .  pc - the preconditioning context
949785d1243SStefano Zampini 
950785d1243SStefano Zampini    Output Parameters:
951785d1243SStefano Zampini .  NeumannBoundaries - index set defining the Neumann boundaries
952785d1243SStefano Zampini 
953785d1243SStefano Zampini    Level: intermediate
954785d1243SStefano Zampini 
9550f202f7eSStefano Zampini    Notes:
9560f202f7eSStefano Zampini      The IS returned (if any) is the same passed in earlier by the user with PCBDDCSetNeumannBoundaries
957785d1243SStefano Zampini 
958785d1243SStefano Zampini .seealso: PCBDDC
959785d1243SStefano Zampini @*/
960785d1243SStefano Zampini PetscErrorCode PCBDDCGetNeumannBoundaries(PC pc,IS *NeumannBoundaries)
961785d1243SStefano Zampini {
962785d1243SStefano Zampini   PetscErrorCode ierr;
963785d1243SStefano Zampini 
964785d1243SStefano Zampini   PetscFunctionBegin;
965785d1243SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
966785d1243SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetNeumannBoundaries_C",(PC,IS*),(pc,NeumannBoundaries));CHKERRQ(ierr);
967785d1243SStefano Zampini   PetscFunctionReturn(0);
968785d1243SStefano Zampini }
969785d1243SStefano Zampini 
970785d1243SStefano Zampini #undef __FUNCT__
971785d1243SStefano Zampini #define __FUNCT__ "PCBDDCGetNeumannBoundariesLocal_BDDC"
972785d1243SStefano Zampini static PetscErrorCode PCBDDCGetNeumannBoundariesLocal_BDDC(PC pc,IS *NeumannBoundaries)
973785d1243SStefano Zampini {
974785d1243SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
975785d1243SStefano Zampini 
976785d1243SStefano Zampini   PetscFunctionBegin;
977785d1243SStefano Zampini   *NeumannBoundaries = pcbddc->NeumannBoundariesLocal;
978785d1243SStefano Zampini   PetscFunctionReturn(0);
979785d1243SStefano Zampini }
980785d1243SStefano Zampini 
981785d1243SStefano Zampini #undef __FUNCT__
98282ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCGetNeumannBoundariesLocal"
98353cdbc3dSStefano Zampini /*@
98482ba6b80SStefano Zampini  PCBDDCGetNeumannBoundariesLocal - Get parallel IS for Neumann boundaries (in local ordering)
98553cdbc3dSStefano Zampini 
986785d1243SStefano Zampini    Collective
98753cdbc3dSStefano Zampini 
98853cdbc3dSStefano Zampini    Input Parameters:
98928509bceSStefano Zampini .  pc - the preconditioning context
99053cdbc3dSStefano Zampini 
99153cdbc3dSStefano Zampini    Output Parameters:
99228509bceSStefano Zampini .  NeumannBoundaries - index set defining the subdomain part of Neumann boundaries
99353cdbc3dSStefano Zampini 
99453cdbc3dSStefano Zampini    Level: intermediate
99553cdbc3dSStefano Zampini 
99653cdbc3dSStefano Zampini    Notes:
9970f202f7eSStefano Zampini      The IS returned could be the same passed in earlier by the user (if provided with PCBDDCSetNeumannBoundariesLocal) or a global-to-local map of the global IS (if provided with PCBDDCSetNeumannBoundaries).
9980f202f7eSStefano Zampini           In the latter case, the IS will be available after PCSetUp.
99953cdbc3dSStefano Zampini 
100053cdbc3dSStefano Zampini .seealso: PCBDDC
100153cdbc3dSStefano Zampini @*/
100282ba6b80SStefano Zampini PetscErrorCode PCBDDCGetNeumannBoundariesLocal(PC pc,IS *NeumannBoundaries)
100353cdbc3dSStefano Zampini {
100453cdbc3dSStefano Zampini   PetscErrorCode ierr;
100553cdbc3dSStefano Zampini 
100653cdbc3dSStefano Zampini   PetscFunctionBegin;
100753cdbc3dSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
100882ba6b80SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetNeumannBoundariesLocal_C",(PC,IS*),(pc,NeumannBoundaries));CHKERRQ(ierr);
10090c7d97c5SJed Brown   PetscFunctionReturn(0);
10100c7d97c5SJed Brown }
10111e6b0712SBarry Smith 
101236e030ebSStefano Zampini #undef __FUNCT__
1013da1bb401SStefano Zampini #define __FUNCT__ "PCBDDCSetLocalAdjacencyGraph_BDDC"
10141a83f524SJed Brown static PetscErrorCode PCBDDCSetLocalAdjacencyGraph_BDDC(PC pc, PetscInt nvtxs,const PetscInt xadj[],const PetscInt adjncy[], PetscCopyMode copymode)
101536e030ebSStefano Zampini {
101636e030ebSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
1017da1bb401SStefano Zampini   PCBDDCGraph    mat_graph = pcbddc->mat_graph;
101856282151SStefano Zampini   PetscBool      same_data = PETSC_FALSE;
1019da1bb401SStefano Zampini   PetscErrorCode ierr;
102036e030ebSStefano Zampini 
102136e030ebSStefano Zampini   PetscFunctionBegin;
10228687889aSStefano Zampini   if (!nvtxs) {
102304194a47SStefano Zampini     if (copymode == PETSC_OWN_POINTER) {
102404194a47SStefano Zampini       ierr = PetscFree(xadj);CHKERRQ(ierr);
102504194a47SStefano Zampini       ierr = PetscFree(adjncy);CHKERRQ(ierr);
102604194a47SStefano Zampini     }
10278687889aSStefano Zampini     ierr = PCBDDCGraphResetCSR(mat_graph);CHKERRQ(ierr);
10288687889aSStefano Zampini     PetscFunctionReturn(0);
10298687889aSStefano Zampini   }
103066da6bd7Sstefano_zampini   if (mat_graph->nvtxs == nvtxs && mat_graph->freecsr) { /* we own the data */
103156282151SStefano Zampini     if (mat_graph->xadj == xadj && mat_graph->adjncy == adjncy) same_data = PETSC_TRUE;
103256282151SStefano Zampini     if (!same_data && mat_graph->xadj[nvtxs] == xadj[nvtxs]) {
10332d505d7fSStefano Zampini       ierr = PetscMemcmp(xadj,mat_graph->xadj,(nvtxs+1)*sizeof(PetscInt),&same_data);CHKERRQ(ierr);
10342d505d7fSStefano Zampini       if (same_data) {
10352d505d7fSStefano Zampini         ierr = PetscMemcmp(adjncy,mat_graph->adjncy,xadj[nvtxs]*sizeof(PetscInt),&same_data);CHKERRQ(ierr);
10362d505d7fSStefano Zampini       }
103756282151SStefano Zampini     }
103856282151SStefano Zampini   }
103956282151SStefano Zampini   if (!same_data) {
1040674ae819SStefano Zampini     /* free old CSR */
1041674ae819SStefano Zampini     ierr = PCBDDCGraphResetCSR(mat_graph);CHKERRQ(ierr);
1042674ae819SStefano Zampini     /* get CSR into graph structure */
1043da1bb401SStefano Zampini     if (copymode == PETSC_COPY_VALUES) {
1044854ce69bSBarry Smith       ierr = PetscMalloc1(nvtxs+1,&mat_graph->xadj);CHKERRQ(ierr);
1045785e854fSJed Brown       ierr = PetscMalloc1(xadj[nvtxs],&mat_graph->adjncy);CHKERRQ(ierr);
1046674ae819SStefano Zampini       ierr = PetscMemcpy(mat_graph->xadj,xadj,(nvtxs+1)*sizeof(PetscInt));CHKERRQ(ierr);
1047674ae819SStefano Zampini       ierr = PetscMemcpy(mat_graph->adjncy,adjncy,xadj[nvtxs]*sizeof(PetscInt));CHKERRQ(ierr);
1048a1dbd327SStefano Zampini       mat_graph->freecsr = PETSC_TRUE;
1049da1bb401SStefano Zampini     } else if (copymode == PETSC_OWN_POINTER) {
10501a83f524SJed Brown       mat_graph->xadj    = (PetscInt*)xadj;
10511a83f524SJed Brown       mat_graph->adjncy  = (PetscInt*)adjncy;
1052a1dbd327SStefano Zampini       mat_graph->freecsr = PETSC_TRUE;
1053a1dbd327SStefano Zampini     } else if (copymode == PETSC_USE_POINTER) {
1054a1dbd327SStefano Zampini       mat_graph->xadj    = (PetscInt*)xadj;
1055a1dbd327SStefano Zampini       mat_graph->adjncy  = (PetscInt*)adjncy;
1056a1dbd327SStefano Zampini       mat_graph->freecsr = PETSC_FALSE;
1057a1dbd327SStefano Zampini     } else SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Unsupported copy mode %d",copymode);
1058575ad6abSStefano Zampini     mat_graph->nvtxs_csr = nvtxs;
105956282151SStefano Zampini     pcbddc->recompute_topography = PETSC_TRUE;
106056282151SStefano Zampini   }
106136e030ebSStefano Zampini   PetscFunctionReturn(0);
106236e030ebSStefano Zampini }
10631e6b0712SBarry Smith 
106436e030ebSStefano Zampini #undef __FUNCT__
1065da1bb401SStefano Zampini #define __FUNCT__ "PCBDDCSetLocalAdjacencyGraph"
106636e030ebSStefano Zampini /*@
106754fffbccSStefano Zampini  PCBDDCSetLocalAdjacencyGraph - Set adjacency structure (CSR graph) of the local degrees of freedom.
106836e030ebSStefano Zampini 
106936e030ebSStefano Zampini    Not collective
107036e030ebSStefano Zampini 
107136e030ebSStefano Zampini    Input Parameters:
107254fffbccSStefano Zampini +  pc - the preconditioning context.
107354fffbccSStefano Zampini .  nvtxs - number of local vertices of the graph (i.e., the number of local dofs).
107454fffbccSStefano Zampini .  xadj, adjncy - the connectivity of the dofs in CSR format.
107554fffbccSStefano Zampini -  copymode - supported modes are PETSC_COPY_VALUES, PETSC_USE_POINTER or PETSC_OWN_POINTER.
107636e030ebSStefano Zampini 
107736e030ebSStefano Zampini    Level: intermediate
107836e030ebSStefano Zampini 
107954fffbccSStefano Zampini    Notes: A dof is considered connected with all local dofs if xadj[dof+1]-xadj[dof] == 1 and adjncy[xadj[dof]] is negative.
108036e030ebSStefano Zampini 
108128509bceSStefano Zampini .seealso: PCBDDC,PetscCopyMode
108236e030ebSStefano Zampini @*/
10831a83f524SJed Brown PetscErrorCode PCBDDCSetLocalAdjacencyGraph(PC pc,PetscInt nvtxs,const PetscInt xadj[],const PetscInt adjncy[], PetscCopyMode copymode)
108436e030ebSStefano Zampini {
1085575ad6abSStefano Zampini   void (*f)(void) = 0;
108636e030ebSStefano Zampini   PetscErrorCode ierr;
108736e030ebSStefano Zampini 
108836e030ebSStefano Zampini   PetscFunctionBegin;
108936e030ebSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
10908687889aSStefano Zampini   if (nvtxs) {
1091674ae819SStefano Zampini     PetscValidIntPointer(xadj,3);
10921633d1f0SStefano Zampini     if (xadj[nvtxs]) PetscValidIntPointer(adjncy,4);
10938687889aSStefano Zampini   }
10941a83f524SJed Brown   ierr = PetscTryMethod(pc,"PCBDDCSetLocalAdjacencyGraph_C",(PC,PetscInt,const PetscInt[],const PetscInt[],PetscCopyMode),(pc,nvtxs,xadj,adjncy,copymode));CHKERRQ(ierr);
1095575ad6abSStefano Zampini   /* free arrays if PCBDDC is not the PC type */
1096575ad6abSStefano Zampini   ierr = PetscObjectQueryFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",&f);CHKERRQ(ierr);
1097575ad6abSStefano Zampini   if (!f && copymode == PETSC_OWN_POINTER) {
1098575ad6abSStefano Zampini     ierr = PetscFree(xadj);CHKERRQ(ierr);
1099575ad6abSStefano Zampini     ierr = PetscFree(adjncy);CHKERRQ(ierr);
1100da1bb401SStefano Zampini   }
110136e030ebSStefano Zampini   PetscFunctionReturn(0);
110236e030ebSStefano Zampini }
11031e6b0712SBarry Smith 
11049c0446d6SStefano Zampini #undef __FUNCT__
110563602bcaSStefano Zampini #define __FUNCT__ "PCBDDCSetDofsSplittingLocal_BDDC"
110663602bcaSStefano Zampini static PetscErrorCode PCBDDCSetDofsSplittingLocal_BDDC(PC pc,PetscInt n_is, IS ISForDofs[])
110763602bcaSStefano Zampini {
110863602bcaSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
110963602bcaSStefano Zampini   PetscInt       i;
111056282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
111163602bcaSStefano Zampini   PetscErrorCode ierr;
111263602bcaSStefano Zampini 
111363602bcaSStefano Zampini   PetscFunctionBegin;
111456282151SStefano Zampini   if (pcbddc->n_ISForDofsLocal == n_is) {
111556282151SStefano Zampini     for (i=0;i<n_is;i++) {
111656282151SStefano Zampini       PetscBool isequalt;
111756282151SStefano Zampini       ierr = ISEqual(ISForDofs[i],pcbddc->ISForDofsLocal[i],&isequalt);CHKERRQ(ierr);
111856282151SStefano Zampini       if (!isequalt) break;
111956282151SStefano Zampini     }
112056282151SStefano Zampini     if (i == n_is) isequal = PETSC_TRUE;
112156282151SStefano Zampini   }
112256282151SStefano Zampini   for (i=0;i<n_is;i++) {
112356282151SStefano Zampini     ierr = PetscObjectReference((PetscObject)ISForDofs[i]);CHKERRQ(ierr);
112456282151SStefano Zampini   }
112563602bcaSStefano Zampini   /* Destroy ISes if they were already set */
112663602bcaSStefano Zampini   for (i=0;i<pcbddc->n_ISForDofsLocal;i++) {
112763602bcaSStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofsLocal[i]);CHKERRQ(ierr);
112863602bcaSStefano Zampini   }
112963602bcaSStefano Zampini   ierr = PetscFree(pcbddc->ISForDofsLocal);CHKERRQ(ierr);
113063602bcaSStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
113163602bcaSStefano Zampini   for (i=0;i<pcbddc->n_ISForDofs;i++) {
113263602bcaSStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofs[i]);CHKERRQ(ierr);
113363602bcaSStefano Zampini   }
113463602bcaSStefano Zampini   ierr = PetscFree(pcbddc->ISForDofs);CHKERRQ(ierr);
113563602bcaSStefano Zampini   pcbddc->n_ISForDofs = 0;
113663602bcaSStefano Zampini   /* allocate space then set */
1137d02579f5SStefano Zampini   if (n_is) {
1138d02579f5SStefano Zampini     ierr = PetscMalloc1(n_is,&pcbddc->ISForDofsLocal);CHKERRQ(ierr);
1139d02579f5SStefano Zampini   }
114063602bcaSStefano Zampini   for (i=0;i<n_is;i++) {
114163602bcaSStefano Zampini     pcbddc->ISForDofsLocal[i] = ISForDofs[i];
114263602bcaSStefano Zampini   }
114363602bcaSStefano Zampini   pcbddc->n_ISForDofsLocal = n_is;
114463602bcaSStefano Zampini   if (n_is) pcbddc->user_provided_isfordofs = PETSC_TRUE;
114556282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
114663602bcaSStefano Zampini   PetscFunctionReturn(0);
114763602bcaSStefano Zampini }
114863602bcaSStefano Zampini 
114963602bcaSStefano Zampini #undef __FUNCT__
115063602bcaSStefano Zampini #define __FUNCT__ "PCBDDCSetDofsSplittingLocal"
115163602bcaSStefano Zampini /*@
115263602bcaSStefano Zampini  PCBDDCSetDofsSplittingLocal - Set index sets defining fields of the local subdomain matrix
115363602bcaSStefano Zampini 
115463602bcaSStefano Zampini    Collective
115563602bcaSStefano Zampini 
115663602bcaSStefano Zampini    Input Parameters:
115763602bcaSStefano Zampini +  pc - the preconditioning context
11580f202f7eSStefano Zampini .  n_is - number of index sets defining the fields
11590f202f7eSStefano Zampini -  ISForDofs - array of IS describing the fields in local ordering
116063602bcaSStefano Zampini 
116163602bcaSStefano Zampini    Level: intermediate
116263602bcaSStefano Zampini 
11630f202f7eSStefano Zampini    Notes:
11640f202f7eSStefano Zampini      n_is should be the same among processes. Not all nodes need to be listed: unlisted nodes will belong to the complement field.
116563602bcaSStefano Zampini 
116663602bcaSStefano Zampini .seealso: PCBDDC
116763602bcaSStefano Zampini @*/
116863602bcaSStefano Zampini PetscErrorCode PCBDDCSetDofsSplittingLocal(PC pc,PetscInt n_is, IS ISForDofs[])
116963602bcaSStefano Zampini {
117063602bcaSStefano Zampini   PetscInt       i;
117163602bcaSStefano Zampini   PetscErrorCode ierr;
117263602bcaSStefano Zampini 
117363602bcaSStefano Zampini   PetscFunctionBegin;
117463602bcaSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
117563602bcaSStefano Zampini   PetscValidLogicalCollectiveInt(pc,n_is,2);
117663602bcaSStefano Zampini   for (i=0;i<n_is;i++) {
117763602bcaSStefano Zampini     PetscCheckSameComm(pc,1,ISForDofs[i],3);
117863602bcaSStefano Zampini     PetscValidHeaderSpecific(ISForDofs[i],IS_CLASSID,3);
117963602bcaSStefano Zampini   }
1180e71e7a71SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDofsSplittingLocal_C",(PC,PetscInt,IS[]),(pc,n_is,ISForDofs));CHKERRQ(ierr);
118163602bcaSStefano Zampini   PetscFunctionReturn(0);
118263602bcaSStefano Zampini }
118363602bcaSStefano Zampini 
118463602bcaSStefano Zampini #undef __FUNCT__
11859c0446d6SStefano Zampini #define __FUNCT__ "PCBDDCSetDofsSplitting_BDDC"
11869c0446d6SStefano Zampini static PetscErrorCode PCBDDCSetDofsSplitting_BDDC(PC pc,PetscInt n_is, IS ISForDofs[])
11879c0446d6SStefano Zampini {
11889c0446d6SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
11899c0446d6SStefano Zampini   PetscInt       i;
119056282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
11919c0446d6SStefano Zampini   PetscErrorCode ierr;
11929c0446d6SStefano Zampini 
11939c0446d6SStefano Zampini   PetscFunctionBegin;
119456282151SStefano Zampini   if (pcbddc->n_ISForDofs == n_is) {
119556282151SStefano Zampini     for (i=0;i<n_is;i++) {
119656282151SStefano Zampini       PetscBool isequalt;
119756282151SStefano Zampini       ierr = ISEqual(ISForDofs[i],pcbddc->ISForDofs[i],&isequalt);CHKERRQ(ierr);
119856282151SStefano Zampini       if (!isequalt) break;
119956282151SStefano Zampini     }
120056282151SStefano Zampini     if (i == n_is) isequal = PETSC_TRUE;
120156282151SStefano Zampini   }
120256282151SStefano Zampini   for (i=0;i<n_is;i++) {
120356282151SStefano Zampini     ierr = PetscObjectReference((PetscObject)ISForDofs[i]);CHKERRQ(ierr);
120456282151SStefano Zampini   }
1205da1bb401SStefano Zampini   /* Destroy ISes if they were already set */
12069c0446d6SStefano Zampini   for (i=0;i<pcbddc->n_ISForDofs;i++) {
12079c0446d6SStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofs[i]);CHKERRQ(ierr);
12089c0446d6SStefano Zampini   }
1209d11ae9bbSstefano_zampini   ierr = PetscFree(pcbddc->ISForDofs);CHKERRQ(ierr);
121063602bcaSStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
121163602bcaSStefano Zampini   for (i=0;i<pcbddc->n_ISForDofsLocal;i++) {
121263602bcaSStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofsLocal[i]);CHKERRQ(ierr);
121363602bcaSStefano Zampini   }
121463602bcaSStefano Zampini   ierr = PetscFree(pcbddc->ISForDofsLocal);CHKERRQ(ierr);
121563602bcaSStefano Zampini   pcbddc->n_ISForDofsLocal = 0;
1216da1bb401SStefano Zampini   /* allocate space then set */
1217d02579f5SStefano Zampini   if (n_is) {
1218785e854fSJed Brown     ierr = PetscMalloc1(n_is,&pcbddc->ISForDofs);CHKERRQ(ierr);
1219d02579f5SStefano Zampini   }
12209c0446d6SStefano Zampini   for (i=0;i<n_is;i++) {
1221da1bb401SStefano Zampini     pcbddc->ISForDofs[i] = ISForDofs[i];
12229c0446d6SStefano Zampini   }
12239c0446d6SStefano Zampini   pcbddc->n_ISForDofs = n_is;
122463602bcaSStefano Zampini   if (n_is) pcbddc->user_provided_isfordofs = PETSC_TRUE;
122556282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
12269c0446d6SStefano Zampini   PetscFunctionReturn(0);
12279c0446d6SStefano Zampini }
12281e6b0712SBarry Smith 
12299c0446d6SStefano Zampini #undef __FUNCT__
12309c0446d6SStefano Zampini #define __FUNCT__ "PCBDDCSetDofsSplitting"
12319c0446d6SStefano Zampini /*@
123263602bcaSStefano Zampini  PCBDDCSetDofsSplitting - Set index sets defining fields of the global matrix
12339c0446d6SStefano Zampini 
123463602bcaSStefano Zampini    Collective
12359c0446d6SStefano Zampini 
12369c0446d6SStefano Zampini    Input Parameters:
12379c0446d6SStefano Zampini +  pc - the preconditioning context
12380f202f7eSStefano Zampini .  n_is - number of index sets defining the fields
12390f202f7eSStefano Zampini -  ISForDofs - array of IS describing the fields in global ordering
12409c0446d6SStefano Zampini 
12419c0446d6SStefano Zampini    Level: intermediate
12429c0446d6SStefano Zampini 
12430f202f7eSStefano Zampini    Notes:
12440f202f7eSStefano Zampini      Any process can list any global node. Not all nodes need to be listed: unlisted nodes will belong to the complement field.
12459c0446d6SStefano Zampini 
12469c0446d6SStefano Zampini .seealso: PCBDDC
12479c0446d6SStefano Zampini @*/
12489c0446d6SStefano Zampini PetscErrorCode PCBDDCSetDofsSplitting(PC pc,PetscInt n_is, IS ISForDofs[])
12499c0446d6SStefano Zampini {
12502b510759SStefano Zampini   PetscInt       i;
12519c0446d6SStefano Zampini   PetscErrorCode ierr;
12529c0446d6SStefano Zampini 
12539c0446d6SStefano Zampini   PetscFunctionBegin;
12549c0446d6SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
125563602bcaSStefano Zampini   PetscValidLogicalCollectiveInt(pc,n_is,2);
12562b510759SStefano Zampini   for (i=0;i<n_is;i++) {
125763602bcaSStefano Zampini     PetscValidHeaderSpecific(ISForDofs[i],IS_CLASSID,3);
1258a011d5a7Sstefano_zampini     PetscCheckSameComm(pc,1,ISForDofs[i],3);
12592b510759SStefano Zampini   }
12609c0446d6SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDofsSplitting_C",(PC,PetscInt,IS[]),(pc,n_is,ISForDofs));CHKERRQ(ierr);
12619c0446d6SStefano Zampini   PetscFunctionReturn(0);
12629c0446d6SStefano Zampini }
1263906d46d4SStefano Zampini 
1264534831adSStefano Zampini #undef __FUNCT__
1265534831adSStefano Zampini #define __FUNCT__ "PCPreSolve_BDDC"
1266534831adSStefano Zampini /*
1267534831adSStefano Zampini    PCPreSolve_BDDC - Changes the right hand side and (if necessary) the initial
1268534831adSStefano Zampini                      guess if a transformation of basis approach has been selected.
12699c0446d6SStefano Zampini 
1270534831adSStefano Zampini    Input Parameter:
1271534831adSStefano Zampini +  pc - the preconditioner contex
1272534831adSStefano Zampini 
1273534831adSStefano Zampini    Application Interface Routine: PCPreSolve()
1274534831adSStefano Zampini 
1275534831adSStefano Zampini    Notes:
1276534831adSStefano Zampini      The interface routine PCPreSolve() is not usually called directly by
1277534831adSStefano Zampini    the user, but instead is called by KSPSolve().
1278534831adSStefano Zampini */
1279534831adSStefano Zampini static PetscErrorCode PCPreSolve_BDDC(PC pc, KSP ksp, Vec rhs, Vec x)
1280534831adSStefano Zampini {
1281534831adSStefano Zampini   PetscErrorCode ierr;
1282534831adSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
1283534831adSStefano Zampini   PC_IS          *pcis = (PC_IS*)(pc->data);
12843972b0daSStefano Zampini   Vec            used_vec;
128527b6a85dSStefano Zampini   PetscBool      save_rhs = PETSC_TRUE, benign_correction_computed;
1286534831adSStefano Zampini 
1287534831adSStefano Zampini   PetscFunctionBegin;
12881f4df5f7SStefano Zampini   /* if we are working with CG, one dirichlet solve can be avoided during Krylov iterations */
128985c4d303SStefano Zampini   if (ksp) {
12901f4df5f7SStefano Zampini     PetscBool iscg, isgroppcg, ispipecg, ispipecgrr;
129185c4d303SStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)ksp,KSPCG,&iscg);CHKERRQ(ierr);
129227b6a85dSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)ksp,KSPGROPPCG,&isgroppcg);CHKERRQ(ierr);
129327b6a85dSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)ksp,KSPPIPECG,&ispipecg);CHKERRQ(ierr);
1294f94e96cbSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)ksp,KSPPIPECGRR,&ispipecgrr);CHKERRQ(ierr);
12951f4df5f7SStefano Zampini     if (pcbddc->benign_apply_coarse_only || pcbddc->switch_static || (!iscg && !isgroppcg && !ispipecg && !ispipecgrr)) {
129685c4d303SStefano Zampini       ierr = PCBDDCSetUseExactDirichlet(pc,PETSC_FALSE);CHKERRQ(ierr);
129785c4d303SStefano Zampini     }
129885c4d303SStefano Zampini   }
1299fc17d649SStefano Zampini   if (pcbddc->benign_apply_coarse_only || pcbddc->switch_static) {
1300fc17d649SStefano Zampini     ierr = PCBDDCSetUseExactDirichlet(pc,PETSC_FALSE);CHKERRQ(ierr);
1301fc17d649SStefano Zampini   }
13021f4df5f7SStefano Zampini 
130385c4d303SStefano Zampini   /* Creates parallel work vectors used in presolve */
130462a6ff1dSStefano Zampini   if (!pcbddc->original_rhs) {
130562a6ff1dSStefano Zampini     ierr = VecDuplicate(pcis->vec1_global,&pcbddc->original_rhs);CHKERRQ(ierr);
130662a6ff1dSStefano Zampini   }
130762a6ff1dSStefano Zampini   if (!pcbddc->temp_solution) {
130862a6ff1dSStefano Zampini     ierr = VecDuplicate(pcis->vec1_global,&pcbddc->temp_solution);CHKERRQ(ierr);
130962a6ff1dSStefano Zampini   }
13108d00608fSStefano Zampini 
131127b6a85dSStefano Zampini   pcbddc->temp_solution_used = PETSC_FALSE;
13123972b0daSStefano Zampini   if (x) {
13133972b0daSStefano Zampini     ierr = PetscObjectReference((PetscObject)x);CHKERRQ(ierr);
13143972b0daSStefano Zampini     used_vec = x;
13158d00608fSStefano Zampini   } else { /* it can only happen when calling PCBDDCMatFETIDPGetRHS */
13163972b0daSStefano Zampini     ierr = PetscObjectReference((PetscObject)pcbddc->temp_solution);CHKERRQ(ierr);
13173972b0daSStefano Zampini     used_vec = pcbddc->temp_solution;
13183972b0daSStefano Zampini     ierr = VecSet(used_vec,0.0);CHKERRQ(ierr);
131927b6a85dSStefano Zampini     pcbddc->temp_solution_used = PETSC_TRUE;
1320266e20e9SStefano Zampini     ierr = VecCopy(rhs,pcbddc->original_rhs);CHKERRQ(ierr);
1321266e20e9SStefano Zampini     save_rhs = PETSC_FALSE;
1322266e20e9SStefano Zampini     pcbddc->eliminate_dirdofs = PETSC_TRUE;
13233972b0daSStefano Zampini   }
13248efcfb23SStefano Zampini 
13258efcfb23SStefano Zampini   /* hack into ksp data structure since PCPreSolve comes earlier than setting to zero the guess in src/ksp/ksp/interface/itfunc.c */
13263972b0daSStefano Zampini   if (ksp) {
1327a0cb1b98SStefano Zampini     /* store the flag for the initial guess since it will be restored back during PCPostSolve_BDDC */
13288efcfb23SStefano Zampini     ierr = KSPGetInitialGuessNonzero(ksp,&pcbddc->ksp_guess_nonzero);CHKERRQ(ierr);
13298efcfb23SStefano Zampini     if (!pcbddc->ksp_guess_nonzero) {
13303972b0daSStefano Zampini       ierr = VecSet(used_vec,0.0);CHKERRQ(ierr);
13313972b0daSStefano Zampini     }
13323972b0daSStefano Zampini   }
13333308cffdSStefano Zampini 
13348d00608fSStefano Zampini   pcbddc->rhs_change = PETSC_FALSE;
13353972b0daSStefano Zampini   /* Take into account zeroed rows -> change rhs and store solution removed */
133670c64980SStefano Zampini   if (rhs && pcbddc->eliminate_dirdofs) {
13373975b054SStefano Zampini     IS dirIS = NULL;
13383975b054SStefano Zampini 
1339a07ea27aSStefano Zampini     /* DirichletBoundariesLocal may not be consistent among neighbours; gets a dirichlet dofs IS from graph (may be cached) */
13403975b054SStefano Zampini     ierr = PCBDDCGraphGetDirichletDofs(pcbddc->mat_graph,&dirIS);CHKERRQ(ierr);
13413975b054SStefano Zampini     if (dirIS) {
1342906d46d4SStefano Zampini       Mat_IS            *matis = (Mat_IS*)pc->pmat->data;
1343785d1243SStefano Zampini       PetscInt          dirsize,i,*is_indices;
13442b095fd8SStefano Zampini       PetscScalar       *array_x;
13452b095fd8SStefano Zampini       const PetscScalar *array_diagonal;
1346785d1243SStefano Zampini 
13473972b0daSStefano Zampini       ierr = MatGetDiagonal(pc->pmat,pcis->vec1_global);CHKERRQ(ierr);
13483972b0daSStefano Zampini       ierr = VecPointwiseDivide(pcis->vec1_global,rhs,pcis->vec1_global);CHKERRQ(ierr);
1349e176bc59SStefano Zampini       ierr = VecScatterBegin(matis->rctx,pcis->vec1_global,pcis->vec2_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1350e176bc59SStefano Zampini       ierr = VecScatterEnd(matis->rctx,pcis->vec1_global,pcis->vec2_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1351e176bc59SStefano Zampini       ierr = VecScatterBegin(matis->rctx,used_vec,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1352e176bc59SStefano Zampini       ierr = VecScatterEnd(matis->rctx,used_vec,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
135382ba6b80SStefano Zampini       ierr = ISGetLocalSize(dirIS,&dirsize);CHKERRQ(ierr);
13543972b0daSStefano Zampini       ierr = VecGetArray(pcis->vec1_N,&array_x);CHKERRQ(ierr);
13552b095fd8SStefano Zampini       ierr = VecGetArrayRead(pcis->vec2_N,&array_diagonal);CHKERRQ(ierr);
13563972b0daSStefano Zampini       ierr = ISGetIndices(dirIS,(const PetscInt**)&is_indices);CHKERRQ(ierr);
13572fa5cd67SKarl Rupp       for (i=0; i<dirsize; i++) array_x[is_indices[i]] = array_diagonal[is_indices[i]];
13583972b0daSStefano Zampini       ierr = ISRestoreIndices(dirIS,(const PetscInt**)&is_indices);CHKERRQ(ierr);
13592b095fd8SStefano Zampini       ierr = VecRestoreArrayRead(pcis->vec2_N,&array_diagonal);CHKERRQ(ierr);
13603972b0daSStefano Zampini       ierr = VecRestoreArray(pcis->vec1_N,&array_x);CHKERRQ(ierr);
1361e176bc59SStefano Zampini       ierr = VecScatterBegin(matis->rctx,pcis->vec1_N,used_vec,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1362e176bc59SStefano Zampini       ierr = VecScatterEnd(matis->rctx,pcis->vec1_N,used_vec,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
13638d00608fSStefano Zampini       pcbddc->rhs_change = PETSC_TRUE;
13641b968477SStefano Zampini       ierr = ISDestroy(&dirIS);CHKERRQ(ierr);
13658efcfb23SStefano Zampini     }
1366a07ea27aSStefano Zampini   }
1367b76ba322SStefano Zampini 
13688efcfb23SStefano Zampini   /* remove the computed solution or the initial guess from the rhs */
13698d00608fSStefano Zampini   if (pcbddc->rhs_change || (ksp && pcbddc->ksp_guess_nonzero) ) {
137027b6a85dSStefano Zampini     /* save the original rhs */
137127b6a85dSStefano Zampini     if (save_rhs) {
137227b6a85dSStefano Zampini       ierr = VecSwap(rhs,pcbddc->original_rhs);CHKERRQ(ierr);
137327b6a85dSStefano Zampini       save_rhs = PETSC_FALSE;
13748d00608fSStefano Zampini     }
13758d00608fSStefano Zampini     pcbddc->rhs_change = PETSC_TRUE;
13763972b0daSStefano Zampini     ierr = VecScale(used_vec,-1.0);CHKERRQ(ierr);
137727b6a85dSStefano Zampini     ierr = MatMultAdd(pc->mat,used_vec,pcbddc->original_rhs,rhs);CHKERRQ(ierr);
13783972b0daSStefano Zampini     ierr = VecScale(used_vec,-1.0);CHKERRQ(ierr);
13798efcfb23SStefano Zampini     ierr = VecCopy(used_vec,pcbddc->temp_solution);CHKERRQ(ierr);
138027b6a85dSStefano Zampini     pcbddc->temp_solution_used = PETSC_TRUE;
13817acc28cbSStefano Zampini     if (ksp) {
13827acc28cbSStefano Zampini       ierr = KSPSetInitialGuessNonzero(ksp,PETSC_FALSE);CHKERRQ(ierr);
13837acc28cbSStefano Zampini     }
13843308cffdSStefano Zampini   }
13858efcfb23SStefano Zampini   ierr = VecDestroy(&used_vec);CHKERRQ(ierr);
1386b76ba322SStefano Zampini 
1387fc17d649SStefano Zampini   /* compute initial vector in benign space if needed
138827b6a85dSStefano Zampini      and remove non-benign solution from the rhs */
138927b6a85dSStefano Zampini   benign_correction_computed = PETSC_FALSE;
139027b6a85dSStefano Zampini   if (rhs && pcbddc->benign_compute_correction && pcbddc->benign_have_null) {
13911f4df5f7SStefano Zampini     /* compute u^*_h using ideas similar to those in Xuemin Tu's PhD thesis (see Section 4.8.1)
13921f4df5f7SStefano Zampini        Recursively apply BDDC in the multilevel case */
13930369aaf7SStefano Zampini     if (!pcbddc->benign_vec) {
13940369aaf7SStefano Zampini       ierr = VecDuplicate(rhs,&pcbddc->benign_vec);CHKERRQ(ierr);
13950369aaf7SStefano Zampini     }
13964fee134fSStefano Zampini     pcbddc->benign_apply_coarse_only = PETSC_TRUE;
139727b6a85dSStefano Zampini     if (!pcbddc->benign_skip_correction) {
13981dd7afcfSStefano Zampini       ierr = PCApply_BDDC(pc,rhs,pcbddc->benign_vec);CHKERRQ(ierr);
13993bca92a6SStefano Zampini       benign_correction_computed = PETSC_TRUE;
14001f4df5f7SStefano Zampini       if (pcbddc->temp_solution_used) {
14011f4df5f7SStefano Zampini         ierr = VecAXPY(pcbddc->temp_solution,1.0,pcbddc->benign_vec);CHKERRQ(ierr);
14021f4df5f7SStefano Zampini       }
14031f4df5f7SStefano Zampini       ierr = VecScale(pcbddc->benign_vec,-1.0);CHKERRQ(ierr);
140427b6a85dSStefano Zampini       /* store the original rhs if not done earlier */
140527b6a85dSStefano Zampini       if (save_rhs) {
140627b6a85dSStefano Zampini         ierr = VecSwap(rhs,pcbddc->original_rhs);CHKERRQ(ierr);
140792e3dcfbSStefano Zampini       }
140827b6a85dSStefano Zampini       if (pcbddc->rhs_change) {
14090369aaf7SStefano Zampini         ierr = MatMultAdd(pc->mat,pcbddc->benign_vec,rhs,rhs);CHKERRQ(ierr);
141027b6a85dSStefano Zampini       } else {
141127b6a85dSStefano Zampini         ierr = MatMultAdd(pc->mat,pcbddc->benign_vec,pcbddc->original_rhs,rhs);CHKERRQ(ierr);
141227b6a85dSStefano Zampini       }
14130369aaf7SStefano Zampini       pcbddc->rhs_change = PETSC_TRUE;
141427b6a85dSStefano Zampini     }
141527b6a85dSStefano Zampini     pcbddc->benign_apply_coarse_only = PETSC_FALSE;
14160369aaf7SStefano Zampini   }
14172d4c4fecSStefano Zampini 
14182d4c4fecSStefano Zampini   /* dbg output */
1419a198735bSStefano Zampini   if (pcbddc->dbg_flag && benign_correction_computed) {
14201f4df5f7SStefano Zampini     Vec v;
14211f4df5f7SStefano Zampini     ierr = VecDuplicate(pcis->vec1_global,&v);CHKERRQ(ierr);
14221f4df5f7SStefano Zampini     ierr = MatMultTranspose(pcbddc->ChangeOfBasisMatrix,rhs,v);CHKERRQ(ierr);
14231f4df5f7SStefano Zampini     ierr = PCBDDCBenignGetOrSetP0(pc,v,PETSC_TRUE);CHKERRQ(ierr);
1424a198735bSStefano Zampini     ierr = PetscViewerASCIIPrintf(pcbddc->dbg_viewer,"LEVEL %d: is the correction benign?\n",pcbddc->current_level);CHKERRQ(ierr);
14252d4c4fecSStefano Zampini     ierr = PetscScalarView(pcbddc->benign_n,pcbddc->benign_p0,PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)pc)));CHKERRQ(ierr);
14261f4df5f7SStefano Zampini     ierr = VecDestroy(&v);CHKERRQ(ierr);
14271f4df5f7SStefano Zampini   }
14280369aaf7SStefano Zampini 
14290369aaf7SStefano Zampini   /* set initial guess if using PCG */
14308ae0ca82SStefano Zampini   pcbddc->exact_dirichlet_trick_app = PETSC_FALSE;
14310369aaf7SStefano Zampini   if (x && pcbddc->use_exact_dirichlet_trick) {
14320369aaf7SStefano Zampini     ierr = VecSet(x,0.0);CHKERRQ(ierr);
14331dd7afcfSStefano Zampini     if (pcbddc->ChangeOfBasisMatrix && pcbddc->change_interior) {
143427b6a85dSStefano Zampini       if (benign_correction_computed) { /* we have already saved the changed rhs */
14351dd7afcfSStefano Zampini         ierr = VecLockPop(pcis->vec1_global);CHKERRQ(ierr);
14361dd7afcfSStefano Zampini       } else {
14371dd7afcfSStefano Zampini         ierr = MatMultTranspose(pcbddc->ChangeOfBasisMatrix,rhs,pcis->vec1_global);CHKERRQ(ierr);
14381dd7afcfSStefano Zampini       }
14391dd7afcfSStefano Zampini       ierr = VecScatterBegin(pcis->global_to_D,pcis->vec1_global,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
14401dd7afcfSStefano Zampini       ierr = VecScatterEnd(pcis->global_to_D,pcis->vec1_global,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
14411dd7afcfSStefano Zampini     } else {
14420369aaf7SStefano Zampini       ierr = VecScatterBegin(pcis->global_to_D,rhs,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
14430369aaf7SStefano Zampini       ierr = VecScatterEnd(pcis->global_to_D,rhs,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
14441dd7afcfSStefano Zampini     }
14450369aaf7SStefano Zampini     ierr = KSPSolve(pcbddc->ksp_D,pcis->vec1_D,pcis->vec2_D);CHKERRQ(ierr);
14461dd7afcfSStefano Zampini     if (pcbddc->ChangeOfBasisMatrix && pcbddc->change_interior) {
14471dd7afcfSStefano Zampini       ierr = VecSet(pcis->vec1_global,0.);CHKERRQ(ierr);
14481dd7afcfSStefano Zampini       ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,pcis->vec1_global,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14491dd7afcfSStefano Zampini       ierr = VecScatterEnd(pcis->global_to_D,pcis->vec2_D,pcis->vec1_global,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14501dd7afcfSStefano Zampini       ierr = MatMult(pcbddc->ChangeOfBasisMatrix,pcis->vec1_global,x);CHKERRQ(ierr);
14511dd7afcfSStefano Zampini     } else {
14520369aaf7SStefano Zampini       ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,x,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14530369aaf7SStefano Zampini       ierr = VecScatterEnd(pcis->global_to_D,pcis->vec2_D,x,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14541dd7afcfSStefano Zampini     }
14550369aaf7SStefano Zampini     if (ksp) {
14560369aaf7SStefano Zampini       ierr = KSPSetInitialGuessNonzero(ksp,PETSC_TRUE);CHKERRQ(ierr);
14570369aaf7SStefano Zampini     }
14588ae0ca82SStefano Zampini     pcbddc->exact_dirichlet_trick_app = PETSC_TRUE;
1459266e20e9SStefano Zampini   } else if (pcbddc->ChangeOfBasisMatrix && pcbddc->change_interior && benign_correction_computed && pcbddc->use_exact_dirichlet_trick) {
1460266e20e9SStefano Zampini     ierr = VecLockPop(pcis->vec1_global);CHKERRQ(ierr);
14610369aaf7SStefano Zampini   }
1462534831adSStefano Zampini   PetscFunctionReturn(0);
1463534831adSStefano Zampini }
1464906d46d4SStefano Zampini 
1465534831adSStefano Zampini #undef __FUNCT__
1466534831adSStefano Zampini #define __FUNCT__ "PCPostSolve_BDDC"
1467534831adSStefano Zampini /*
1468534831adSStefano Zampini    PCPostSolve_BDDC - Changes the computed solution if a transformation of basis
1469534831adSStefano Zampini                      approach has been selected. Also, restores rhs to its original state.
1470534831adSStefano Zampini 
1471534831adSStefano Zampini    Input Parameter:
1472534831adSStefano Zampini +  pc - the preconditioner contex
1473534831adSStefano Zampini 
1474534831adSStefano Zampini    Application Interface Routine: PCPostSolve()
1475534831adSStefano Zampini 
1476534831adSStefano Zampini    Notes:
1477534831adSStefano Zampini      The interface routine PCPostSolve() is not usually called directly by
1478534831adSStefano Zampini      the user, but instead is called by KSPSolve().
1479534831adSStefano Zampini */
1480534831adSStefano Zampini static PetscErrorCode PCPostSolve_BDDC(PC pc, KSP ksp, Vec rhs, Vec x)
1481534831adSStefano Zampini {
1482534831adSStefano Zampini   PetscErrorCode ierr;
1483534831adSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
1484534831adSStefano Zampini 
1485534831adSStefano Zampini   PetscFunctionBegin;
14863972b0daSStefano Zampini   /* add solution removed in presolve */
14876bcfc461SStefano Zampini   if (x && pcbddc->rhs_change) {
148827b6a85dSStefano Zampini     if (pcbddc->temp_solution_used) {
14893425bc38SStefano Zampini       ierr = VecAXPY(x,1.0,pcbddc->temp_solution);CHKERRQ(ierr);
1490af140850Sstefano_zampini     } else if (pcbddc->benign_compute_correction && pcbddc->benign_vec) {
149127b6a85dSStefano Zampini       ierr = VecAXPY(x,-1.0,pcbddc->benign_vec);CHKERRQ(ierr);
14923425bc38SStefano Zampini     }
1493af140850Sstefano_zampini     /* restore to original state (not for FETI-DP) */
1494af140850Sstefano_zampini     if (ksp) pcbddc->temp_solution_used = PETSC_FALSE;
149527b6a85dSStefano Zampini   }
149627b6a85dSStefano Zampini 
1497266e20e9SStefano Zampini   /* restore rhs to its original state (not needed for FETI-DP) */
14988d00608fSStefano Zampini   if (rhs && pcbddc->rhs_change) {
149927b6a85dSStefano Zampini     ierr = VecSwap(rhs,pcbddc->original_rhs);CHKERRQ(ierr);
15008d00608fSStefano Zampini     pcbddc->rhs_change = PETSC_FALSE;
1501af140850Sstefano_zampini   }
15028efcfb23SStefano Zampini   /* restore ksp guess state */
15038efcfb23SStefano Zampini   if (ksp) {
15048efcfb23SStefano Zampini     ierr = KSPSetInitialGuessNonzero(ksp,pcbddc->ksp_guess_nonzero);CHKERRQ(ierr);
15058ae0ca82SStefano Zampini     /* reset flag for exact dirichlet trick */
15068ae0ca82SStefano Zampini     pcbddc->exact_dirichlet_trick_app = PETSC_FALSE;
1507af140850Sstefano_zampini   }
1508534831adSStefano Zampini   PetscFunctionReturn(0);
1509534831adSStefano Zampini }
1510af140850Sstefano_zampini 
151153cdbc3dSStefano Zampini #undef __FUNCT__
151253cdbc3dSStefano Zampini #define __FUNCT__ "PCSetUp_BDDC"
15130c7d97c5SJed Brown /*
15140c7d97c5SJed Brown    PCSetUp_BDDC - Prepares for the use of the BDDC preconditioner
15150c7d97c5SJed Brown                   by setting data structures and options.
15160c7d97c5SJed Brown 
15170c7d97c5SJed Brown    Input Parameter:
151853cdbc3dSStefano Zampini +  pc - the preconditioner context
15190c7d97c5SJed Brown 
15200c7d97c5SJed Brown    Application Interface Routine: PCSetUp()
15210c7d97c5SJed Brown 
15220c7d97c5SJed Brown    Notes:
15230c7d97c5SJed Brown      The interface routine PCSetUp() is not usually called directly by
15240c7d97c5SJed Brown      the user, but instead is called by PCApply() if necessary.
15250c7d97c5SJed Brown */
152653cdbc3dSStefano Zampini PetscErrorCode PCSetUp_BDDC(PC pc)
15270c7d97c5SJed Brown {
15280c7d97c5SJed Brown   PC_BDDC*        pcbddc = (PC_BDDC*)pc->data;
1529c703fcc7SStefano Zampini   PCBDDCSubSchurs sub_schurs;
15305e8657edSStefano Zampini   Mat_IS*         matis;
153108122e43SStefano Zampini   MatNullSpace    nearnullspace;
153235509ce9Sstefano_zampini   Mat             lA;
153335509ce9Sstefano_zampini   IS              lP,zerodiag = NULL;
153491e8d312SStefano Zampini   PetscInt        nrows,ncols;
1535c703fcc7SStefano Zampini   PetscBool       computesubschurs;
15368de1fae6SStefano Zampini   PetscBool       computeconstraintsmatrix;
15375e8657edSStefano Zampini   PetscBool       new_nearnullspace_provided,ismatis;
1538c703fcc7SStefano Zampini   PetscErrorCode  ierr;
15390c7d97c5SJed Brown 
15400c7d97c5SJed Brown   PetscFunctionBegin;
15415e8657edSStefano Zampini   ierr = PetscObjectTypeCompare((PetscObject)pc->pmat,MATIS,&ismatis);CHKERRQ(ierr);
15426c4ed002SBarry Smith   if (!ismatis) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_ARG_WRONG,"PCBDDC preconditioner requires matrix of type MATIS");
154391e8d312SStefano Zampini   ierr = MatGetSize(pc->pmat,&nrows,&ncols);CHKERRQ(ierr);
15446c4ed002SBarry Smith   if (nrows != ncols) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"PCBDDC preconditioner requires a square preconditioning matrix");
15455e8657edSStefano Zampini   matis = (Mat_IS*)pc->pmat->data;
1546f4ddd8eeSStefano Zampini   /* the following lines of code should be replaced by a better logic between PCIS, PCNN, PCBDDC and other future nonoverlapping preconditioners */
15473b03a366Sstefano_zampini   /* For BDDC we need to define a local "Neumann" problem different to that defined in PCISSetup
154871582508SStefano Zampini      Also, BDDC builds its own KSP for the Dirichlet problem */
1549c703fcc7SStefano Zampini   if (pc->setupcalled && pc->flag != SAME_NONZERO_PATTERN) pcbddc->recompute_topography = PETSC_TRUE;
1550c83e1ba7SStefano Zampini   if (pcbddc->recompute_topography) {
1551c83e1ba7SStefano Zampini     pcbddc->graphanalyzed    = PETSC_FALSE;
1552c83e1ba7SStefano Zampini     computeconstraintsmatrix = PETSC_TRUE;
1553c83e1ba7SStefano Zampini   } else {
15548de1fae6SStefano Zampini     computeconstraintsmatrix = PETSC_FALSE;
1555c83e1ba7SStefano Zampini   }
1556b087196eSStefano Zampini 
1557b087196eSStefano Zampini   /* check parameters' compatibility */
1558b7ab4a40SStefano Zampini   if (!pcbddc->use_deluxe_scaling) pcbddc->deluxe_zerorows = PETSC_FALSE;
15599d54b7f4SStefano Zampini   pcbddc->adaptive_selection = (PetscBool)(pcbddc->adaptive_threshold > 0.0);
1560bf3a8328SStefano Zampini   pcbddc->adaptive_userdefined = (PetscBool)(pcbddc->adaptive_selection && pcbddc->adaptive_userdefined);
1561862806e4SStefano Zampini   if (pcbddc->adaptive_selection) pcbddc->use_faces = PETSC_TRUE;
1562862806e4SStefano Zampini 
15635a95e1ceSStefano Zampini   computesubschurs = (PetscBool)(pcbddc->adaptive_selection || pcbddc->use_deluxe_scaling);
156416909a7fSStefano Zampini   if (pcbddc->switch_static) {
156516909a7fSStefano Zampini     PetscBool ismatis;
156616909a7fSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)pc->mat,MATIS,&ismatis);CHKERRQ(ierr);
156716909a7fSStefano Zampini     if (!ismatis) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"When the static switch is one, the iteration matrix should be of type MATIS");
156816909a7fSStefano Zampini   }
156916909a7fSStefano Zampini 
157071582508SStefano Zampini   /* activate all connected components if the netflux has been requested */
1571bb05f991SStefano Zampini   if (pcbddc->compute_nonetflux) {
1572bb05f991SStefano Zampini     pcbddc->use_vertices = PETSC_TRUE;
1573bb05f991SStefano Zampini     pcbddc->use_edges = PETSC_TRUE;
1574bb05f991SStefano Zampini     pcbddc->use_faces = PETSC_TRUE;
1575bb05f991SStefano Zampini   }
1576bb05f991SStefano Zampini 
1577f4ddd8eeSStefano Zampini   /* Get stdout for dbg */
157870cf5478SStefano Zampini   if (pcbddc->dbg_flag) {
157970cf5478SStefano Zampini     if (!pcbddc->dbg_viewer) {
158058a03d70SStefano Zampini       pcbddc->dbg_viewer = PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)pc));
15811575c14dSBarry Smith       ierr = PetscViewerASCIIPushSynchronized(pcbddc->dbg_viewer);CHKERRQ(ierr);
1582f4ddd8eeSStefano Zampini     }
158358a03d70SStefano Zampini     ierr = PetscViewerASCIIAddTab(pcbddc->dbg_viewer,2*pcbddc->current_level);CHKERRQ(ierr);
1584f4ddd8eeSStefano Zampini   }
1585f4ddd8eeSStefano Zampini 
1586c703fcc7SStefano Zampini   /* process topology information */
158771582508SStefano Zampini   if (pcbddc->recompute_topography) {
15885b003df0Sstefano_zampini     PetscContainer   c;
15895b003df0Sstefano_zampini 
15905b003df0Sstefano_zampini     ierr = PetscObjectQuery((PetscObject)pc->pmat,"_convert_nest_lfields",(PetscObject*)&c);CHKERRQ(ierr);
15915b003df0Sstefano_zampini     if (c) {
15925b003df0Sstefano_zampini       MatISLocalFields lf;
15935b003df0Sstefano_zampini       ierr = PetscContainerGetPointer(c,(void**)&lf);CHKERRQ(ierr);
15945b003df0Sstefano_zampini       ierr = PCBDDCSetDofsSplittingLocal(pc,lf->nr,lf->rf);CHKERRQ(ierr);
15955b003df0Sstefano_zampini     }
159671582508SStefano Zampini     ierr = PCBDDCComputeLocalTopologyInfo(pc);CHKERRQ(ierr);
1597c83e1ba7SStefano Zampini     /* detect local disconnected subdomains if requested (use matis->A) */
1598c83e1ba7SStefano Zampini     if (pcbddc->detect_disconnected) {
1599c83e1ba7SStefano Zampini       PetscInt i;
1600c83e1ba7SStefano Zampini       for (i=0;i<pcbddc->n_local_subs;i++) {
1601c83e1ba7SStefano Zampini         ierr = ISDestroy(&pcbddc->local_subs[i]);CHKERRQ(ierr);
1602c83e1ba7SStefano Zampini       }
1603c83e1ba7SStefano Zampini       ierr = PetscFree(pcbddc->local_subs);CHKERRQ(ierr);
1604c83e1ba7SStefano Zampini       ierr = MatDetectDisconnectedComponents(matis->A,PETSC_FALSE,&pcbddc->n_local_subs,&pcbddc->local_subs);CHKERRQ(ierr);
1605c83e1ba7SStefano Zampini     }
1606c703fcc7SStefano Zampini     if (pcbddc->discretegradient) {
1607a13144ffSStefano Zampini       ierr = PCBDDCNedelecSupport(pc);CHKERRQ(ierr);
1608a13144ffSStefano Zampini     }
1609c703fcc7SStefano Zampini   }
1610a13144ffSStefano Zampini 
1611c703fcc7SStefano Zampini   /* change basis if requested by the user */
16125e8657edSStefano Zampini   if (pcbddc->user_ChangeOfBasisMatrix) {
16135e8657edSStefano Zampini     /* use_change_of_basis flag is used to automatically compute a change of basis from constraints */
16145e8657edSStefano Zampini     pcbddc->use_change_of_basis = PETSC_FALSE;
16155e8657edSStefano Zampini     ierr = PCBDDCComputeLocalMatrix(pc,pcbddc->user_ChangeOfBasisMatrix);CHKERRQ(ierr);
16165e8657edSStefano Zampini   } else {
1617b96c3477SStefano Zampini     ierr = MatDestroy(&pcbddc->local_mat);CHKERRQ(ierr);
16185e8657edSStefano Zampini     ierr = PetscObjectReference((PetscObject)matis->A);CHKERRQ(ierr);
16195e8657edSStefano Zampini     pcbddc->local_mat = matis->A;
1620d16cbb6bSStefano Zampini   }
1621d16cbb6bSStefano Zampini 
16224f1b2e48SStefano Zampini   /*
1623c703fcc7SStefano Zampini      Compute change of basis on local pressures (aka zerodiag dofs) with the benign trick
16244f1b2e48SStefano Zampini      This should come earlier then PCISSetUp for extracting the correct subdomain matrices
16254f1b2e48SStefano Zampini   */
16261dd7afcfSStefano Zampini   ierr = PCBDDCBenignShellMat(pc,PETSC_TRUE);CHKERRQ(ierr);
1627d16cbb6bSStefano Zampini   if (pcbddc->benign_saddle_point) {
16289f47a83aSStefano Zampini     PC_IS* pcis = (PC_IS*)pc->data;
16299f47a83aSStefano Zampini 
163005b28244SStefano Zampini     if (pcbddc->user_ChangeOfBasisMatrix || pcbddc->use_change_of_basis || !computesubschurs) pcbddc->benign_change_explicit = PETSC_TRUE;
1631669cc0f4SStefano Zampini     /* detect local saddle point and change the basis in pcbddc->local_mat (TODO: reuse case) */
1632339f8db1SStefano Zampini     ierr = PCBDDCBenignDetectSaddlePoint(pc,&zerodiag);CHKERRQ(ierr);
1633a3df083aSStefano Zampini     /* pop B0 mat from local mat */
1634c263805aSStefano Zampini     ierr = PCBDDCBenignPopOrPushB0(pc,PETSC_TRUE);CHKERRQ(ierr);
16351dd7afcfSStefano Zampini     /* give pcis a hint to not reuse submatrices during PCISCreate */
16361dd7afcfSStefano Zampini     if (pc->flag == SAME_NONZERO_PATTERN && pcis->reusesubmatrices == PETSC_TRUE) {
16371dd7afcfSStefano Zampini       if (pcbddc->benign_n && (pcbddc->benign_change_explicit || pcbddc->dbg_flag)) {
16381dd7afcfSStefano Zampini         pcis->reusesubmatrices = PETSC_FALSE;
16391dd7afcfSStefano Zampini       } else {
1640a3df083aSStefano Zampini         pcis->reusesubmatrices = PETSC_TRUE;
16411dd7afcfSStefano Zampini       }
1642a3df083aSStefano Zampini     } else {
16439f47a83aSStefano Zampini       pcis->reusesubmatrices = PETSC_FALSE;
1644674ae819SStefano Zampini     }
1645a3df083aSStefano Zampini   }
164627b6a85dSStefano Zampini 
1647c703fcc7SStefano Zampini   /* propagate relevant information -> TODO remove*/
16484f1b2e48SStefano Zampini #if !defined(PETSC_USE_COMPLEX) /* workaround for reals */
16493301b35fSStefano Zampini   if (matis->A->symmetric_set) {
16503301b35fSStefano Zampini     ierr = MatSetOption(pcbddc->local_mat,MAT_HERMITIAN,matis->A->symmetric);CHKERRQ(ierr);
16513301b35fSStefano Zampini   }
1652e496cd5dSStefano Zampini #endif
165306a4e24aSStefano Zampini   if (matis->A->symmetric_set) {
165406a4e24aSStefano Zampini     ierr = MatSetOption(pcbddc->local_mat,MAT_SYMMETRIC,matis->A->symmetric);CHKERRQ(ierr);
165506a4e24aSStefano Zampini   }
165606a4e24aSStefano Zampini   if (matis->A->spd_set) {
165706a4e24aSStefano Zampini     ierr = MatSetOption(pcbddc->local_mat,MAT_SPD,matis->A->spd);CHKERRQ(ierr);
165806a4e24aSStefano Zampini   }
1659e496cd5dSStefano Zampini 
16605e8657edSStefano Zampini   /* Set up all the "iterative substructuring" common block without computing solvers */
16615e8657edSStefano Zampini   {
16625e8657edSStefano Zampini     Mat temp_mat;
16635e8657edSStefano Zampini 
16645e8657edSStefano Zampini     temp_mat = matis->A;
16655e8657edSStefano Zampini     matis->A = pcbddc->local_mat;
16665e8657edSStefano Zampini     ierr = PCISSetUp(pc,PETSC_FALSE);CHKERRQ(ierr);
16675e8657edSStefano Zampini     pcbddc->local_mat = matis->A;
16685e8657edSStefano Zampini     matis->A = temp_mat;
16695e8657edSStefano Zampini   }
1670684f6988SStefano Zampini 
167181d14e9dSStefano Zampini   /* Analyze interface */
167264ac59b8SStefano Zampini   if (!pcbddc->graphanalyzed) {
1673674ae819SStefano Zampini     ierr = PCBDDCAnalyzeInterface(pc);CHKERRQ(ierr);
16748de1fae6SStefano Zampini     computeconstraintsmatrix = PETSC_TRUE;
1675345ecf6cSStefano Zampini     if (pcbddc->adaptive_selection && !pcbddc->use_deluxe_scaling && !pcbddc->mat_graph->twodim) {
1676345ecf6cSStefano Zampini       SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot compute the adaptive primal space for a problem with 3D edges without deluxe scaling");
1677345ecf6cSStefano Zampini     }
1678a198735bSStefano Zampini     if (pcbddc->compute_nonetflux) {
1679669cc0f4SStefano Zampini       MatNullSpace nnfnnsp;
1680669cc0f4SStefano Zampini 
16818ae0ca82SStefano Zampini       ierr = PCBDDCComputeNoNetFlux(pc->pmat,pcbddc->divudotp,pcbddc->divudotp_trans,pcbddc->divudotp_vl2l,pcbddc->mat_graph,&nnfnnsp);CHKERRQ(ierr);
168271582508SStefano Zampini       /* TODO what if a nearnullspace is already attached? */
1683669cc0f4SStefano Zampini       ierr = MatSetNearNullSpace(pc->pmat,nnfnnsp);CHKERRQ(ierr);
1684669cc0f4SStefano Zampini       ierr = MatNullSpaceDestroy(&nnfnnsp);CHKERRQ(ierr);
1685669cc0f4SStefano Zampini     }
1686674ae819SStefano Zampini   }
1687fb8d54d4SStefano Zampini 
16885408967cSStefano Zampini   /* check existence of a divergence free extension, i.e.
16895408967cSStefano Zampini      b(v_I,p_0) = 0 for all v_I (raise error if not).
16905408967cSStefano Zampini      Also, check that PCBDDCBenignGetOrSetP0 works */
1691ff1f7e73Sstefano_zampini   if (pcbddc->benign_saddle_point && pcbddc->dbg_flag > 1) {
16925408967cSStefano Zampini     ierr = PCBDDCBenignCheck(pc,zerodiag);CHKERRQ(ierr);
169309f581a4SStefano Zampini   }
16944f1b2e48SStefano Zampini   ierr = ISDestroy(&zerodiag);CHKERRQ(ierr);
169506f24817SStefano Zampini 
1696b96c3477SStefano Zampini   /* Setup local dirichlet solver ksp_D and sub_schurs solvers */
1697c703fcc7SStefano Zampini   if (computesubschurs && pcbddc->recompute_topography) {
169808122e43SStefano Zampini     ierr = PCBDDCInitSubSchurs(pc);CHKERRQ(ierr);
1699b1b3d7a2SStefano Zampini   }
17009d54b7f4SStefano Zampini   /* SetUp Scaling operator (scaling matrices could be needed in SubSchursSetUp)*/
17019d54b7f4SStefano Zampini   if (!pcbddc->use_deluxe_scaling) {
17029d54b7f4SStefano Zampini     ierr = PCBDDCScalingSetUp(pc);CHKERRQ(ierr);
17039d54b7f4SStefano Zampini   }
1704c703fcc7SStefano Zampini 
1705c703fcc7SStefano Zampini   /* finish setup solvers and do adaptive selection of constraints */
1706b334f244SStefano Zampini   sub_schurs = pcbddc->sub_schurs;
1707b334f244SStefano Zampini   if (sub_schurs && sub_schurs->schur_explicit) {
17082070dbb6SStefano Zampini     if (computesubschurs) {
170908122e43SStefano Zampini       ierr = PCBDDCSetUpSubSchurs(pc);CHKERRQ(ierr);
17102070dbb6SStefano Zampini     }
1711d5574798SStefano Zampini     ierr = PCBDDCSetUpLocalSolvers(pc,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr);
1712d5574798SStefano Zampini   } else {
1713d5574798SStefano Zampini     ierr = PCBDDCSetUpLocalSolvers(pc,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr);
17142070dbb6SStefano Zampini     if (computesubschurs) {
1715d5574798SStefano Zampini       ierr = PCBDDCSetUpSubSchurs(pc);CHKERRQ(ierr);
1716d5574798SStefano Zampini     }
17172070dbb6SStefano Zampini   }
171808122e43SStefano Zampini   if (pcbddc->adaptive_selection) {
171908122e43SStefano Zampini     ierr = PCBDDCAdaptiveSelection(pc);CHKERRQ(ierr);
17208de1fae6SStefano Zampini     computeconstraintsmatrix = PETSC_TRUE;
1721b7eb3628SStefano Zampini   }
1722684f6988SStefano Zampini 
1723f4ddd8eeSStefano Zampini   /* infer if NullSpace object attached to Mat via MatSetNearNullSpace has changed */
1724fb8d54d4SStefano Zampini   new_nearnullspace_provided = PETSC_FALSE;
1725f4ddd8eeSStefano Zampini   ierr = MatGetNearNullSpace(pc->pmat,&nearnullspace);CHKERRQ(ierr);
1726f4ddd8eeSStefano Zampini   if (pcbddc->onearnullspace) { /* already used nearnullspace */
1727f4ddd8eeSStefano Zampini     if (!nearnullspace) { /* near null space attached to mat has been destroyed */
1728f4ddd8eeSStefano Zampini       new_nearnullspace_provided = PETSC_TRUE;
1729f4ddd8eeSStefano Zampini     } else {
1730f4ddd8eeSStefano Zampini       /* determine if the two nullspaces are different (should be lightweight) */
1731f4ddd8eeSStefano Zampini       if (nearnullspace != pcbddc->onearnullspace) {
1732f4ddd8eeSStefano Zampini         new_nearnullspace_provided = PETSC_TRUE;
1733165b64e2SStefano Zampini       } else { /* maybe the user has changed the content of the nearnullspace so check vectors ObjectStateId */
1734f4ddd8eeSStefano Zampini         PetscInt         i;
1735165b64e2SStefano Zampini         const Vec        *nearnullvecs;
1736165b64e2SStefano Zampini         PetscObjectState state;
1737165b64e2SStefano Zampini         PetscInt         nnsp_size;
1738165b64e2SStefano Zampini         ierr = MatNullSpaceGetVecs(nearnullspace,NULL,&nnsp_size,&nearnullvecs);CHKERRQ(ierr);
1739f4ddd8eeSStefano Zampini         for (i=0;i<nnsp_size;i++) {
1740f4ddd8eeSStefano Zampini           ierr = PetscObjectStateGet((PetscObject)nearnullvecs[i],&state);CHKERRQ(ierr);
1741165b64e2SStefano Zampini           if (pcbddc->onearnullvecs_state[i] != state) {
1742f4ddd8eeSStefano Zampini             new_nearnullspace_provided = PETSC_TRUE;
1743f4ddd8eeSStefano Zampini             break;
1744f4ddd8eeSStefano Zampini           }
1745f4ddd8eeSStefano Zampini         }
1746f4ddd8eeSStefano Zampini       }
1747f4ddd8eeSStefano Zampini     }
1748f4ddd8eeSStefano Zampini   } else {
1749f4ddd8eeSStefano Zampini     if (!nearnullspace) { /* both nearnullspaces are null */
1750f4ddd8eeSStefano Zampini       new_nearnullspace_provided = PETSC_FALSE;
1751f4ddd8eeSStefano Zampini     } else { /* nearnullspace attached later */
1752f4ddd8eeSStefano Zampini       new_nearnullspace_provided = PETSC_TRUE;
1753f4ddd8eeSStefano Zampini     }
1754f4ddd8eeSStefano Zampini   }
1755f4ddd8eeSStefano Zampini 
1756f4ddd8eeSStefano Zampini   /* Setup constraints and related work vectors */
1757727cdba6SStefano Zampini   /* reset primal space flags */
1758f4ddd8eeSStefano Zampini   pcbddc->new_primal_space = PETSC_FALSE;
1759727cdba6SStefano Zampini   pcbddc->new_primal_space_local = PETSC_FALSE;
17608de1fae6SStefano Zampini   if (computeconstraintsmatrix || new_nearnullspace_provided) {
1761727cdba6SStefano Zampini     /* It also sets the primal space flags */
1762674ae819SStefano Zampini     ierr = PCBDDCConstraintsSetUp(pc);CHKERRQ(ierr);
17639543d0ffSStefano Zampini   }
1764e7b262bdSStefano Zampini   /* Allocate needed local vectors (which depends on quantities defined during ConstraintsSetUp) */
1765f4ddd8eeSStefano Zampini   ierr = PCBDDCSetUpLocalWorkVectors(pc);CHKERRQ(ierr);
17665e8657edSStefano Zampini 
17675e8657edSStefano Zampini   if (pcbddc->use_change_of_basis) {
17685e8657edSStefano Zampini     PC_IS *pcis = (PC_IS*)(pc->data);
17695e8657edSStefano Zampini 
17705e8657edSStefano Zampini     ierr = PCBDDCComputeLocalMatrix(pc,pcbddc->ChangeOfBasisMatrix);CHKERRQ(ierr);
17714f1b2e48SStefano Zampini     if (pcbddc->benign_change) {
17721dd7afcfSStefano Zampini       ierr = MatDestroy(&pcbddc->benign_B0);CHKERRQ(ierr);
1773c263805aSStefano Zampini       /* pop B0 from pcbddc->local_mat */
1774c263805aSStefano Zampini       ierr = PCBDDCBenignPopOrPushB0(pc,PETSC_TRUE);CHKERRQ(ierr);
1775c263805aSStefano Zampini     }
17765e8657edSStefano Zampini     /* get submatrices */
17775e8657edSStefano Zampini     ierr = MatDestroy(&pcis->A_IB);CHKERRQ(ierr);
17785e8657edSStefano Zampini     ierr = MatDestroy(&pcis->A_BI);CHKERRQ(ierr);
17795e8657edSStefano Zampini     ierr = MatDestroy(&pcis->A_BB);CHKERRQ(ierr);
17805e8657edSStefano Zampini     ierr = MatGetSubMatrix(pcbddc->local_mat,pcis->is_B_local,pcis->is_B_local,MAT_INITIAL_MATRIX,&pcis->A_BB);CHKERRQ(ierr);
17815e8657edSStefano Zampini     ierr = MatGetSubMatrix(pcbddc->local_mat,pcis->is_I_local,pcis->is_B_local,MAT_INITIAL_MATRIX,&pcis->A_IB);CHKERRQ(ierr);
17825e8657edSStefano Zampini     ierr = MatGetSubMatrix(pcbddc->local_mat,pcis->is_B_local,pcis->is_I_local,MAT_INITIAL_MATRIX,&pcis->A_BI);CHKERRQ(ierr);
17833975b054SStefano Zampini     /* set flag in pcis to not reuse submatrices during PCISCreate */
17843975b054SStefano Zampini     pcis->reusesubmatrices = PETSC_FALSE;
17859c6a02ceSStefano Zampini   } else if (!pcbddc->user_ChangeOfBasisMatrix && !pcbddc->benign_change) {
1786b96c3477SStefano Zampini     ierr = MatDestroy(&pcbddc->local_mat);CHKERRQ(ierr);
17875e8657edSStefano Zampini     ierr = PetscObjectReference((PetscObject)matis->A);CHKERRQ(ierr);
17885e8657edSStefano Zampini     pcbddc->local_mat = matis->A;
17895e8657edSStefano Zampini   }
179035509ce9Sstefano_zampini 
179135509ce9Sstefano_zampini   /* interface pressure block row for B_C */
179235509ce9Sstefano_zampini   ierr = PetscObjectQuery((PetscObject)pc,"__KSPFETIDP_lP" ,(PetscObject*)&lP);CHKERRQ(ierr);
179335509ce9Sstefano_zampini   ierr = PetscObjectQuery((PetscObject)pc,"__KSPFETIDP_lA" ,(PetscObject*)&lA);CHKERRQ(ierr);
179435509ce9Sstefano_zampini   if (lA && lP) {
179535509ce9Sstefano_zampini     PC_IS*    pcis = (PC_IS*)pc->data;
179635509ce9Sstefano_zampini     Mat       B_BI,B_BB,Bt_BI,Bt_BB;
179735509ce9Sstefano_zampini     PetscBool issym;
179835509ce9Sstefano_zampini     ierr = MatIsSymmetric(lA,PETSC_SMALL,&issym);CHKERRQ(ierr);
17996cc1294bSstefano_zampini     if (issym) {
180035509ce9Sstefano_zampini       ierr = MatGetSubMatrix(lA,lP,pcis->is_I_local,MAT_INITIAL_MATRIX,&B_BI);CHKERRQ(ierr);
180135509ce9Sstefano_zampini       ierr = MatGetSubMatrix(lA,lP,pcis->is_B_local,MAT_INITIAL_MATRIX,&B_BB);CHKERRQ(ierr);
180235509ce9Sstefano_zampini       ierr = MatCreateTranspose(B_BI,&Bt_BI);CHKERRQ(ierr);
180335509ce9Sstefano_zampini       ierr = MatCreateTranspose(B_BB,&Bt_BB);CHKERRQ(ierr);
180435509ce9Sstefano_zampini     } else {
18056cc1294bSstefano_zampini       ierr = MatGetSubMatrix(lA,lP,pcis->is_I_local,MAT_INITIAL_MATRIX,&B_BI);CHKERRQ(ierr);
18066cc1294bSstefano_zampini       ierr = MatGetSubMatrix(lA,lP,pcis->is_B_local,MAT_INITIAL_MATRIX,&B_BB);CHKERRQ(ierr);
180735509ce9Sstefano_zampini       ierr = MatGetSubMatrix(lA,pcis->is_I_local,lP,MAT_INITIAL_MATRIX,&Bt_BI);CHKERRQ(ierr);
180835509ce9Sstefano_zampini       ierr = MatGetSubMatrix(lA,pcis->is_B_local,lP,MAT_INITIAL_MATRIX,&Bt_BB);CHKERRQ(ierr);
180935509ce9Sstefano_zampini     }
181035509ce9Sstefano_zampini     ierr = PetscObjectCompose((PetscObject)pc,"__KSPFETIDP_B_BI",(PetscObject)B_BI);CHKERRQ(ierr);
181135509ce9Sstefano_zampini     ierr = PetscObjectCompose((PetscObject)pc,"__KSPFETIDP_B_BB",(PetscObject)B_BB);CHKERRQ(ierr);
181235509ce9Sstefano_zampini     ierr = PetscObjectCompose((PetscObject)pc,"__KSPFETIDP_Bt_BI",(PetscObject)Bt_BI);CHKERRQ(ierr);
181335509ce9Sstefano_zampini     ierr = PetscObjectCompose((PetscObject)pc,"__KSPFETIDP_Bt_BB",(PetscObject)Bt_BB);CHKERRQ(ierr);
181435509ce9Sstefano_zampini     ierr = MatDestroy(&B_BI);CHKERRQ(ierr);
181535509ce9Sstefano_zampini     ierr = MatDestroy(&B_BB);CHKERRQ(ierr);
181635509ce9Sstefano_zampini     ierr = MatDestroy(&Bt_BI);CHKERRQ(ierr);
181735509ce9Sstefano_zampini     ierr = MatDestroy(&Bt_BB);CHKERRQ(ierr);
181835509ce9Sstefano_zampini   }
181935509ce9Sstefano_zampini 
1820b96c3477SStefano Zampini   /* SetUp coarse and local Neumann solvers */
182199cc7994SStefano Zampini   ierr = PCBDDCSetUpSolvers(pc);CHKERRQ(ierr);
1822b96c3477SStefano Zampini   /* SetUp Scaling operator */
18239d54b7f4SStefano Zampini   if (pcbddc->use_deluxe_scaling) {
1824674ae819SStefano Zampini     ierr = PCBDDCScalingSetUp(pc);CHKERRQ(ierr);
18250c7d97c5SJed Brown   }
1826c703fcc7SStefano Zampini 
18271dd7afcfSStefano Zampini   /* mark topography as done */
182856282151SStefano Zampini   pcbddc->recompute_topography = PETSC_FALSE;
18290369aaf7SStefano Zampini 
18301dd7afcfSStefano Zampini   /* wrap pcis->A_IB and pcis->A_BI if we did not change explicitly the variables on the pressures */
18311dd7afcfSStefano Zampini   ierr = PCBDDCBenignShellMat(pc,PETSC_FALSE);CHKERRQ(ierr);
18321dd7afcfSStefano Zampini 
183358a03d70SStefano Zampini   if (pcbddc->dbg_flag) {
183458a03d70SStefano Zampini     ierr = PetscViewerASCIISubtractTab(pcbddc->dbg_viewer,2*pcbddc->current_level);CHKERRQ(ierr);
18352b510759SStefano Zampini   }
18360c7d97c5SJed Brown   PetscFunctionReturn(0);
18370c7d97c5SJed Brown }
18380c7d97c5SJed Brown 
18390c7d97c5SJed Brown /*
184050efa1b5SStefano Zampini    PCApply_BDDC - Applies the BDDC operator to a vector.
18410c7d97c5SJed Brown 
18420c7d97c5SJed Brown    Input Parameters:
18430f202f7eSStefano Zampini +  pc - the preconditioner context
18440f202f7eSStefano Zampini -  r - input vector (global)
18450c7d97c5SJed Brown 
18460c7d97c5SJed Brown    Output Parameter:
18470c7d97c5SJed Brown .  z - output vector (global)
18480c7d97c5SJed Brown 
18490c7d97c5SJed Brown    Application Interface Routine: PCApply()
18500c7d97c5SJed Brown  */
18510c7d97c5SJed Brown #undef __FUNCT__
18520c7d97c5SJed Brown #define __FUNCT__ "PCApply_BDDC"
185353cdbc3dSStefano Zampini PetscErrorCode PCApply_BDDC(PC pc,Vec r,Vec z)
18540c7d97c5SJed Brown {
18550c7d97c5SJed Brown   PC_IS             *pcis = (PC_IS*)(pc->data);
18560c7d97c5SJed Brown   PC_BDDC           *pcbddc = (PC_BDDC*)(pc->data);
1857b097fa66SStefano Zampini   PetscInt          n_B = pcis->n_B, n_D = pcis->n - n_B;
18580c7d97c5SJed Brown   PetscErrorCode    ierr;
18593b03a366Sstefano_zampini   const PetscScalar one = 1.0;
18603b03a366Sstefano_zampini   const PetscScalar m_one = -1.0;
18612617d88aSStefano Zampini   const PetscScalar zero = 0.0;
18620c7d97c5SJed Brown 
18630c7d97c5SJed Brown /* This code is similar to that provided in nn.c for PCNN
18640c7d97c5SJed Brown    NN interface preconditioner changed to BDDC
1865b097fa66SStefano Zampini    Added support for M_3 preconditioner in the reference article (code is active if pcbddc->switch_static == PETSC_TRUE) */
18660c7d97c5SJed Brown 
18670c7d97c5SJed Brown   PetscFunctionBegin;
1868f3d41395Sstefano_zampini   ierr = PetscCitationsRegister(citation,&cited);CHKERRQ(ierr);
18691dd7afcfSStefano Zampini   if (pcbddc->ChangeOfBasisMatrix) {
18701dd7afcfSStefano Zampini     Vec swap;
187127b6a85dSStefano Zampini 
187227b6a85dSStefano Zampini     ierr = MatMultTranspose(pcbddc->ChangeOfBasisMatrix,r,pcbddc->work_change);CHKERRQ(ierr);
18731dd7afcfSStefano Zampini     swap = pcbddc->work_change;
18741dd7afcfSStefano Zampini     pcbddc->work_change = r;
18751dd7afcfSStefano Zampini     r = swap;
18761dd7afcfSStefano Zampini     /* save rhs so that we don't need to apply the change of basis for the exact dirichlet trick in PreSolve */
18779cc2a9b1Sstefano_zampini     if (pcbddc->benign_apply_coarse_only && pcbddc->use_exact_dirichlet_trick && pcbddc->change_interior) {
18781dd7afcfSStefano Zampini       ierr = VecCopy(r,pcis->vec1_global);CHKERRQ(ierr);
18791dd7afcfSStefano Zampini       ierr = VecLockPush(pcis->vec1_global);CHKERRQ(ierr);
18801dd7afcfSStefano Zampini     }
18811dd7afcfSStefano Zampini   }
188227b6a85dSStefano Zampini   if (pcbddc->benign_have_null) { /* get p0 from r */
1883015636ebSStefano Zampini     ierr = PCBDDCBenignGetOrSetP0(pc,r,PETSC_TRUE);CHKERRQ(ierr);
1884efc2fbd9SStefano Zampini   }
18858ae0ca82SStefano Zampini   if (!pcbddc->exact_dirichlet_trick_app && !pcbddc->benign_apply_coarse_only) {
1886b097fa66SStefano Zampini     ierr = VecCopy(r,z);CHKERRQ(ierr);
18870c7d97c5SJed Brown     /* First Dirichlet solve */
18880c7d97c5SJed Brown     ierr = VecScatterBegin(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
18890c7d97c5SJed Brown     ierr = VecScatterEnd(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
18900c7d97c5SJed Brown     /*
18910c7d97c5SJed Brown       Assembling right hand side for BDDC operator
1892b097fa66SStefano Zampini       - pcis->vec1_D for the Dirichlet part (if needed, i.e. pcbddc->switch_static == PETSC_TRUE)
1893674ae819SStefano Zampini       - pcis->vec1_B the interface part of the global vector z
18940c7d97c5SJed Brown     */
1895b097fa66SStefano Zampini     if (n_D) {
1896b097fa66SStefano Zampini       ierr = KSPSolve(pcbddc->ksp_D,pcis->vec1_D,pcis->vec2_D);CHKERRQ(ierr);
18970c7d97c5SJed Brown       ierr = VecScale(pcis->vec2_D,m_one);CHKERRQ(ierr);
189816909a7fSStefano Zampini       if (pcbddc->switch_static) {
189916909a7fSStefano Zampini         Mat_IS *matis = (Mat_IS*)(pc->mat->data);
190016909a7fSStefano Zampini 
190116909a7fSStefano Zampini         ierr = VecSet(pcis->vec1_N,0.);CHKERRQ(ierr);
190216909a7fSStefano Zampini         ierr = VecScatterBegin(pcis->N_to_D,pcis->vec2_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
190316909a7fSStefano Zampini         ierr = VecScatterEnd(pcis->N_to_D,pcis->vec2_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
190416909a7fSStefano Zampini         if (!pcbddc->switch_static_change) {
190516909a7fSStefano Zampini           ierr = MatMult(matis->A,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
190616909a7fSStefano Zampini         } else {
190716909a7fSStefano Zampini           ierr = MatMult(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
190816909a7fSStefano Zampini           ierr = MatMult(matis->A,pcis->vec2_N,pcis->vec1_N);CHKERRQ(ierr);
190916909a7fSStefano Zampini           ierr = MatMultTranspose(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
191016909a7fSStefano Zampini         }
191116909a7fSStefano Zampini         ierr = VecScatterBegin(pcis->N_to_D,pcis->vec2_N,pcis->vec1_D,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
191216909a7fSStefano Zampini         ierr = VecScatterEnd(pcis->N_to_D,pcis->vec2_N,pcis->vec1_D,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
191316909a7fSStefano Zampini         ierr = VecScatterBegin(pcis->N_to_B,pcis->vec2_N,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
191416909a7fSStefano Zampini         ierr = VecScatterEnd(pcis->N_to_B,pcis->vec2_N,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
191516909a7fSStefano Zampini       } else {
1916b097fa66SStefano Zampini         ierr = MatMult(pcis->A_BI,pcis->vec2_D,pcis->vec1_B);CHKERRQ(ierr);
191716909a7fSStefano Zampini       }
1918b097fa66SStefano Zampini     } else {
1919b097fa66SStefano Zampini       ierr = VecSet(pcis->vec1_B,zero);CHKERRQ(ierr);
1920b097fa66SStefano Zampini     }
19210c7d97c5SJed Brown     ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
19220c7d97c5SJed Brown     ierr = VecScatterEnd(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1923674ae819SStefano Zampini     ierr = PCBDDCScalingRestriction(pc,z,pcis->vec1_B);CHKERRQ(ierr);
1924b76ba322SStefano Zampini   } else {
19254fee134fSStefano Zampini     if (!pcbddc->benign_apply_coarse_only) {
1926674ae819SStefano Zampini       ierr = PCBDDCScalingRestriction(pc,r,pcis->vec1_B);CHKERRQ(ierr);
1927b76ba322SStefano Zampini     }
19284fee134fSStefano Zampini   }
1929b76ba322SStefano Zampini 
19302617d88aSStefano Zampini   /* Apply interface preconditioner
19312617d88aSStefano Zampini      input/output vecs: pcis->vec1_B and pcis->vec1_D */
1932dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(pc,PETSC_FALSE);CHKERRQ(ierr);
19332617d88aSStefano Zampini 
1934674ae819SStefano Zampini   /* Apply transpose of partition of unity operator */
1935674ae819SStefano Zampini   ierr = PCBDDCScalingExtension(pc,pcis->vec1_B,z);CHKERRQ(ierr);
19360c7d97c5SJed Brown 
19373b03a366Sstefano_zampini   /* Second Dirichlet solve and assembling of output */
19380c7d97c5SJed Brown   ierr = VecScatterBegin(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
19390c7d97c5SJed Brown   ierr = VecScatterEnd(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1940b097fa66SStefano Zampini   if (n_B) {
194116909a7fSStefano Zampini     if (pcbddc->switch_static) {
194216909a7fSStefano Zampini       Mat_IS *matis = (Mat_IS*)(pc->mat->data);
194316909a7fSStefano Zampini 
194416909a7fSStefano Zampini       ierr = VecScatterBegin(pcis->N_to_D,pcis->vec1_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
194516909a7fSStefano Zampini       ierr = VecScatterEnd(pcis->N_to_D,pcis->vec1_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
194616909a7fSStefano Zampini       ierr = VecScatterBegin(pcis->N_to_B,pcis->vec1_B,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
194716909a7fSStefano Zampini       ierr = VecScatterEnd(pcis->N_to_B,pcis->vec1_B,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
194816909a7fSStefano Zampini       if (!pcbddc->switch_static_change) {
194916909a7fSStefano Zampini         ierr = MatMult(matis->A,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
195016909a7fSStefano Zampini       } else {
195116909a7fSStefano Zampini         ierr = MatMult(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
195216909a7fSStefano Zampini         ierr = MatMult(matis->A,pcis->vec2_N,pcis->vec1_N);CHKERRQ(ierr);
195316909a7fSStefano Zampini         ierr = MatMultTranspose(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
195416909a7fSStefano Zampini       }
195516909a7fSStefano Zampini       ierr = VecScatterBegin(pcis->N_to_D,pcis->vec2_N,pcis->vec3_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
195616909a7fSStefano Zampini       ierr = VecScatterEnd(pcis->N_to_D,pcis->vec2_N,pcis->vec3_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
195716909a7fSStefano Zampini     } else {
19580c7d97c5SJed Brown       ierr = MatMult(pcis->A_IB,pcis->vec1_B,pcis->vec3_D);CHKERRQ(ierr);
195916909a7fSStefano Zampini     }
196016909a7fSStefano Zampini   } else if (pcbddc->switch_static) { /* n_B is zero */
196116909a7fSStefano Zampini     Mat_IS *matis = (Mat_IS*)(pc->mat->data);
196216909a7fSStefano Zampini 
196316909a7fSStefano Zampini     if (!pcbddc->switch_static_change) {
196416909a7fSStefano Zampini       ierr = MatMult(matis->A,pcis->vec1_D,pcis->vec3_D);CHKERRQ(ierr);
196516909a7fSStefano Zampini     } else {
196616909a7fSStefano Zampini       ierr = MatMult(pcbddc->switch_static_change,pcis->vec1_D,pcis->vec1_N);CHKERRQ(ierr);
196716909a7fSStefano Zampini       ierr = MatMult(matis->A,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
196816909a7fSStefano Zampini       ierr = MatMultTranspose(pcbddc->switch_static_change,pcis->vec2_N,pcis->vec3_D);CHKERRQ(ierr);
196916909a7fSStefano Zampini     }
1970b097fa66SStefano Zampini   }
1971df187020SStefano Zampini   ierr = KSPSolve(pcbddc->ksp_D,pcis->vec3_D,pcis->vec4_D);CHKERRQ(ierr);
1972efc2fbd9SStefano Zampini 
19738ae0ca82SStefano Zampini   if (!pcbddc->exact_dirichlet_trick_app && !pcbddc->benign_apply_coarse_only) {
1974b097fa66SStefano Zampini     if (pcbddc->switch_static) {
1975b097fa66SStefano Zampini       ierr = VecAXPBYPCZ(pcis->vec2_D,m_one,one,m_one,pcis->vec4_D,pcis->vec1_D);CHKERRQ(ierr);
1976b097fa66SStefano Zampini     } else {
1977b097fa66SStefano Zampini       ierr = VecAXPBY(pcis->vec2_D,m_one,m_one,pcis->vec4_D);CHKERRQ(ierr);
1978b097fa66SStefano Zampini     }
19790c7d97c5SJed Brown     ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
19800c7d97c5SJed Brown     ierr = VecScatterEnd(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1981b097fa66SStefano Zampini   } else {
1982b097fa66SStefano Zampini     if (pcbddc->switch_static) {
1983b097fa66SStefano Zampini       ierr = VecAXPBY(pcis->vec4_D,one,m_one,pcis->vec1_D);CHKERRQ(ierr);
1984b097fa66SStefano Zampini     } else {
1985b097fa66SStefano Zampini       ierr = VecScale(pcis->vec4_D,m_one);CHKERRQ(ierr);
1986b097fa66SStefano Zampini     }
1987b097fa66SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,pcis->vec4_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1988b097fa66SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,pcis->vec4_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1989b097fa66SStefano Zampini   }
199027b6a85dSStefano Zampini   if (pcbddc->benign_have_null) { /* set p0 (computed in PCBDDCApplyInterface) */
19911dd7afcfSStefano Zampini     if (pcbddc->benign_apply_coarse_only) {
19921dd7afcfSStefano Zampini       ierr = PetscMemzero(pcbddc->benign_p0,pcbddc->benign_n*sizeof(PetscScalar));CHKERRQ(ierr);
19931dd7afcfSStefano Zampini     }
1994015636ebSStefano Zampini     ierr = PCBDDCBenignGetOrSetP0(pc,z,PETSC_FALSE);CHKERRQ(ierr);
1995efc2fbd9SStefano Zampini   }
19961f4df5f7SStefano Zampini 
19971dd7afcfSStefano Zampini   if (pcbddc->ChangeOfBasisMatrix) {
1998f913dca9SStefano Zampini     pcbddc->work_change = r;
19991dd7afcfSStefano Zampini     ierr = VecCopy(z,pcbddc->work_change);CHKERRQ(ierr);
20001dd7afcfSStefano Zampini     ierr = MatMult(pcbddc->ChangeOfBasisMatrix,pcbddc->work_change,z);CHKERRQ(ierr);
20011dd7afcfSStefano Zampini   }
20020c7d97c5SJed Brown   PetscFunctionReturn(0);
20030c7d97c5SJed Brown }
200450efa1b5SStefano Zampini 
200550efa1b5SStefano Zampini /*
200650efa1b5SStefano Zampini    PCApplyTranspose_BDDC - Applies the transpose of the BDDC operator to a vector.
200750efa1b5SStefano Zampini 
200850efa1b5SStefano Zampini    Input Parameters:
20090f202f7eSStefano Zampini +  pc - the preconditioner context
20100f202f7eSStefano Zampini -  r - input vector (global)
201150efa1b5SStefano Zampini 
201250efa1b5SStefano Zampini    Output Parameter:
201350efa1b5SStefano Zampini .  z - output vector (global)
201450efa1b5SStefano Zampini 
201550efa1b5SStefano Zampini    Application Interface Routine: PCApplyTranspose()
201650efa1b5SStefano Zampini  */
201750efa1b5SStefano Zampini #undef __FUNCT__
201850efa1b5SStefano Zampini #define __FUNCT__ "PCApplyTranspose_BDDC"
201950efa1b5SStefano Zampini PetscErrorCode PCApplyTranspose_BDDC(PC pc,Vec r,Vec z)
202050efa1b5SStefano Zampini {
202150efa1b5SStefano Zampini   PC_IS             *pcis = (PC_IS*)(pc->data);
202250efa1b5SStefano Zampini   PC_BDDC           *pcbddc = (PC_BDDC*)(pc->data);
2023b097fa66SStefano Zampini   PetscInt          n_B = pcis->n_B, n_D = pcis->n - n_B;
202450efa1b5SStefano Zampini   PetscErrorCode    ierr;
202550efa1b5SStefano Zampini   const PetscScalar one = 1.0;
202650efa1b5SStefano Zampini   const PetscScalar m_one = -1.0;
202750efa1b5SStefano Zampini   const PetscScalar zero = 0.0;
202850efa1b5SStefano Zampini 
202950efa1b5SStefano Zampini   PetscFunctionBegin;
2030f3d41395Sstefano_zampini   ierr = PetscCitationsRegister(citation,&cited);CHKERRQ(ierr);
20311dd7afcfSStefano Zampini   if (pcbddc->ChangeOfBasisMatrix) {
20321dd7afcfSStefano Zampini     Vec swap;
203327b6a85dSStefano Zampini 
203427b6a85dSStefano Zampini     ierr = MatMultTranspose(pcbddc->ChangeOfBasisMatrix,r,pcbddc->work_change);CHKERRQ(ierr);
20351dd7afcfSStefano Zampini     swap = pcbddc->work_change;
20361dd7afcfSStefano Zampini     pcbddc->work_change = r;
20371dd7afcfSStefano Zampini     r = swap;
203827b6a85dSStefano Zampini     /* save rhs so that we don't need to apply the change of basis for the exact dirichlet trick in PreSolve */
20398ae0ca82SStefano Zampini     if (pcbddc->benign_apply_coarse_only && pcbddc->exact_dirichlet_trick_app && pcbddc->change_interior) {
204027b6a85dSStefano Zampini       ierr = VecCopy(r,pcis->vec1_global);CHKERRQ(ierr);
204127b6a85dSStefano Zampini       ierr = VecLockPush(pcis->vec1_global);CHKERRQ(ierr);
20421dd7afcfSStefano Zampini     }
204327b6a85dSStefano Zampini   }
204427b6a85dSStefano Zampini   if (pcbddc->benign_have_null) { /* get p0 from r */
2045537c1cdfSStefano Zampini     ierr = PCBDDCBenignGetOrSetP0(pc,r,PETSC_TRUE);CHKERRQ(ierr);
2046537c1cdfSStefano Zampini   }
20478ae0ca82SStefano Zampini   if (!pcbddc->exact_dirichlet_trick_app && !pcbddc->benign_apply_coarse_only) {
2048b097fa66SStefano Zampini     ierr = VecCopy(r,z);CHKERRQ(ierr);
204950efa1b5SStefano Zampini     /* First Dirichlet solve */
205050efa1b5SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
205150efa1b5SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
205250efa1b5SStefano Zampini     /*
205350efa1b5SStefano Zampini       Assembling right hand side for BDDC operator
2054b097fa66SStefano Zampini       - pcis->vec1_D for the Dirichlet part (if needed, i.e. pcbddc->switch_static == PETSC_TRUE)
205550efa1b5SStefano Zampini       - pcis->vec1_B the interface part of the global vector z
205650efa1b5SStefano Zampini     */
2057b097fa66SStefano Zampini     if (n_D) {
2058b097fa66SStefano Zampini       ierr = KSPSolveTranspose(pcbddc->ksp_D,pcis->vec1_D,pcis->vec2_D);CHKERRQ(ierr);
205950efa1b5SStefano Zampini       ierr = VecScale(pcis->vec2_D,m_one);CHKERRQ(ierr);
206016909a7fSStefano Zampini       if (pcbddc->switch_static) {
206116909a7fSStefano Zampini         Mat_IS *matis = (Mat_IS*)(pc->mat->data);
206216909a7fSStefano Zampini 
206316909a7fSStefano Zampini         ierr = VecSet(pcis->vec1_N,0.);CHKERRQ(ierr);
206416909a7fSStefano Zampini         ierr = VecScatterBegin(pcis->N_to_D,pcis->vec2_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
206516909a7fSStefano Zampini         ierr = VecScatterEnd(pcis->N_to_D,pcis->vec2_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
206616909a7fSStefano Zampini         if (!pcbddc->switch_static_change) {
206716909a7fSStefano Zampini           ierr = MatMultTranspose(matis->A,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
206816909a7fSStefano Zampini         } else {
206916909a7fSStefano Zampini           ierr = MatMult(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
207016909a7fSStefano Zampini           ierr = MatMultTranspose(matis->A,pcis->vec2_N,pcis->vec1_N);CHKERRQ(ierr);
207116909a7fSStefano Zampini           ierr = MatMultTranspose(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
207216909a7fSStefano Zampini         }
207316909a7fSStefano Zampini         ierr = VecScatterBegin(pcis->N_to_D,pcis->vec2_N,pcis->vec1_D,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
207416909a7fSStefano Zampini         ierr = VecScatterEnd(pcis->N_to_D,pcis->vec2_N,pcis->vec1_D,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
207516909a7fSStefano Zampini         ierr = VecScatterBegin(pcis->N_to_B,pcis->vec2_N,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
207616909a7fSStefano Zampini         ierr = VecScatterEnd(pcis->N_to_B,pcis->vec2_N,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
207716909a7fSStefano Zampini       } else {
2078b097fa66SStefano Zampini         ierr = MatMultTranspose(pcis->A_IB,pcis->vec2_D,pcis->vec1_B);CHKERRQ(ierr);
207916909a7fSStefano Zampini       }
2080b097fa66SStefano Zampini     } else {
2081b097fa66SStefano Zampini       ierr = VecSet(pcis->vec1_B,zero);CHKERRQ(ierr);
2082b097fa66SStefano Zampini     }
208350efa1b5SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
208450efa1b5SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
208550efa1b5SStefano Zampini     ierr = PCBDDCScalingRestriction(pc,z,pcis->vec1_B);CHKERRQ(ierr);
208650efa1b5SStefano Zampini   } else {
208750efa1b5SStefano Zampini     ierr = PCBDDCScalingRestriction(pc,r,pcis->vec1_B);CHKERRQ(ierr);
208850efa1b5SStefano Zampini   }
208950efa1b5SStefano Zampini 
209050efa1b5SStefano Zampini   /* Apply interface preconditioner
209150efa1b5SStefano Zampini      input/output vecs: pcis->vec1_B and pcis->vec1_D */
2092dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(pc,PETSC_TRUE);CHKERRQ(ierr);
209350efa1b5SStefano Zampini 
209450efa1b5SStefano Zampini   /* Apply transpose of partition of unity operator */
209550efa1b5SStefano Zampini   ierr = PCBDDCScalingExtension(pc,pcis->vec1_B,z);CHKERRQ(ierr);
209650efa1b5SStefano Zampini 
209750efa1b5SStefano Zampini   /* Second Dirichlet solve and assembling of output */
209850efa1b5SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
209950efa1b5SStefano Zampini   ierr = VecScatterEnd(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2100b097fa66SStefano Zampini   if (n_B) {
210116909a7fSStefano Zampini     if (pcbddc->switch_static) {
210216909a7fSStefano Zampini       Mat_IS *matis = (Mat_IS*)(pc->mat->data);
210316909a7fSStefano Zampini 
210416909a7fSStefano Zampini       ierr = VecScatterBegin(pcis->N_to_D,pcis->vec1_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
210516909a7fSStefano Zampini       ierr = VecScatterEnd(pcis->N_to_D,pcis->vec1_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
210616909a7fSStefano Zampini       ierr = VecScatterBegin(pcis->N_to_B,pcis->vec1_B,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
210716909a7fSStefano Zampini       ierr = VecScatterEnd(pcis->N_to_B,pcis->vec1_B,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
210816909a7fSStefano Zampini       if (!pcbddc->switch_static_change) {
210916909a7fSStefano Zampini         ierr = MatMultTranspose(matis->A,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
211016909a7fSStefano Zampini       } else {
211116909a7fSStefano Zampini         ierr = MatMult(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
211216909a7fSStefano Zampini         ierr = MatMultTranspose(matis->A,pcis->vec2_N,pcis->vec1_N);CHKERRQ(ierr);
211316909a7fSStefano Zampini         ierr = MatMultTranspose(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
211416909a7fSStefano Zampini       }
211516909a7fSStefano Zampini       ierr = VecScatterBegin(pcis->N_to_D,pcis->vec2_N,pcis->vec3_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
211616909a7fSStefano Zampini       ierr = VecScatterEnd(pcis->N_to_D,pcis->vec2_N,pcis->vec3_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
211716909a7fSStefano Zampini     } else {
211850efa1b5SStefano Zampini       ierr = MatMultTranspose(pcis->A_BI,pcis->vec1_B,pcis->vec3_D);CHKERRQ(ierr);
211916909a7fSStefano Zampini     }
212016909a7fSStefano Zampini   } else if (pcbddc->switch_static) { /* n_B is zero */
212116909a7fSStefano Zampini     Mat_IS *matis = (Mat_IS*)(pc->mat->data);
212216909a7fSStefano Zampini 
212316909a7fSStefano Zampini     if (!pcbddc->switch_static_change) {
212416909a7fSStefano Zampini       ierr = MatMultTranspose(matis->A,pcis->vec1_D,pcis->vec3_D);CHKERRQ(ierr);
212516909a7fSStefano Zampini     } else {
212616909a7fSStefano Zampini       ierr = MatMult(pcbddc->switch_static_change,pcis->vec1_D,pcis->vec1_N);CHKERRQ(ierr);
212716909a7fSStefano Zampini       ierr = MatMultTranspose(matis->A,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
212816909a7fSStefano Zampini       ierr = MatMultTranspose(pcbddc->switch_static_change,pcis->vec2_N,pcis->vec3_D);CHKERRQ(ierr);
212916909a7fSStefano Zampini     }
2130b097fa66SStefano Zampini   }
2131b0147a47SStefano Zampini   ierr = KSPSolveTranspose(pcbddc->ksp_D,pcis->vec3_D,pcis->vec4_D);CHKERRQ(ierr);
21328ae0ca82SStefano Zampini   if (!pcbddc->exact_dirichlet_trick_app && !pcbddc->benign_apply_coarse_only) {
2133b097fa66SStefano Zampini     if (pcbddc->switch_static) {
2134b097fa66SStefano Zampini       ierr = VecAXPBYPCZ(pcis->vec2_D,m_one,one,m_one,pcis->vec4_D,pcis->vec1_D);CHKERRQ(ierr);
2135b097fa66SStefano Zampini     } else {
2136b097fa66SStefano Zampini       ierr = VecAXPBY(pcis->vec2_D,m_one,m_one,pcis->vec4_D);CHKERRQ(ierr);
2137b097fa66SStefano Zampini     }
213850efa1b5SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
213950efa1b5SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2140b097fa66SStefano Zampini   } else {
2141b097fa66SStefano Zampini     if (pcbddc->switch_static) {
2142b097fa66SStefano Zampini       ierr = VecAXPBY(pcis->vec4_D,one,m_one,pcis->vec1_D);CHKERRQ(ierr);
2143b097fa66SStefano Zampini     } else {
2144b097fa66SStefano Zampini       ierr = VecScale(pcis->vec4_D,m_one);CHKERRQ(ierr);
2145b097fa66SStefano Zampini     }
2146b097fa66SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,pcis->vec4_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2147b097fa66SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,pcis->vec4_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2148b097fa66SStefano Zampini   }
214927b6a85dSStefano Zampini   if (pcbddc->benign_have_null) { /* set p0 (computed in PCBDDCApplyInterface) */
2150537c1cdfSStefano Zampini     ierr = PCBDDCBenignGetOrSetP0(pc,z,PETSC_FALSE);CHKERRQ(ierr);
2151537c1cdfSStefano Zampini   }
21521dd7afcfSStefano Zampini   if (pcbddc->ChangeOfBasisMatrix) {
2153f913dca9SStefano Zampini     pcbddc->work_change = r;
21541dd7afcfSStefano Zampini     ierr = VecCopy(z,pcbddc->work_change);CHKERRQ(ierr);
21551dd7afcfSStefano Zampini     ierr = MatMult(pcbddc->ChangeOfBasisMatrix,pcbddc->work_change,z);CHKERRQ(ierr);
21561dd7afcfSStefano Zampini   }
215750efa1b5SStefano Zampini   PetscFunctionReturn(0);
215850efa1b5SStefano Zampini }
2159674ae819SStefano Zampini 
2160da1bb401SStefano Zampini #undef __FUNCT__
21619326c5c6Sstefano_zampini #define __FUNCT__ "PCReset_BDDC"
21629326c5c6Sstefano_zampini PetscErrorCode PCReset_BDDC(PC pc)
2163da1bb401SStefano Zampini {
2164da1bb401SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
21659326c5c6Sstefano_zampini   PC_IS          *pcis = (PC_IS*)pc->data;
21669326c5c6Sstefano_zampini   KSP            kspD,kspR,kspC;
2167da1bb401SStefano Zampini   PetscErrorCode ierr;
2168da1bb401SStefano Zampini 
2169da1bb401SStefano Zampini   PetscFunctionBegin;
2170674ae819SStefano Zampini   /* free BDDC custom data  */
2171674ae819SStefano Zampini   ierr = PCBDDCResetCustomization(pc);CHKERRQ(ierr);
2172674ae819SStefano Zampini   /* destroy objects related to topography */
2173674ae819SStefano Zampini   ierr = PCBDDCResetTopography(pc);CHKERRQ(ierr);
217434a97f8cSStefano Zampini   /* destroy objects for scaling operator */
2175674ae819SStefano Zampini   ierr = PCBDDCScalingDestroy(pc);CHKERRQ(ierr);
2176674ae819SStefano Zampini   /* free solvers stuff */
2177674ae819SStefano Zampini   ierr = PCBDDCResetSolvers(pc);CHKERRQ(ierr);
217862a6ff1dSStefano Zampini   /* free global vectors needed in presolve */
217962a6ff1dSStefano Zampini   ierr = VecDestroy(&pcbddc->temp_solution);CHKERRQ(ierr);
218062a6ff1dSStefano Zampini   ierr = VecDestroy(&pcbddc->original_rhs);CHKERRQ(ierr);
21811dd7afcfSStefano Zampini   /* free data created by PCIS */
21821dd7afcfSStefano Zampini   ierr = PCISDestroy(pc);CHKERRQ(ierr);
21839326c5c6Sstefano_zampini 
21849326c5c6Sstefano_zampini   /* restore defaults */
21859326c5c6Sstefano_zampini   kspD = pcbddc->ksp_D;
21869326c5c6Sstefano_zampini   kspR = pcbddc->ksp_R;
21879326c5c6Sstefano_zampini   kspC = pcbddc->coarse_ksp;
21889326c5c6Sstefano_zampini   ierr = PetscMemzero(pc->data,sizeof(*pcbddc));CHKERRQ(ierr);
21899326c5c6Sstefano_zampini   pcis->n_neigh                     = -1;
21909326c5c6Sstefano_zampini   pcis->scaling_factor              = 1.0;
21919326c5c6Sstefano_zampini   pcis->reusesubmatrices            = PETSC_TRUE;
21929326c5c6Sstefano_zampini   pcbddc->use_local_adj             = PETSC_TRUE;
21939326c5c6Sstefano_zampini   pcbddc->use_vertices              = PETSC_TRUE;
21949326c5c6Sstefano_zampini   pcbddc->use_edges                 = PETSC_TRUE;
21959326c5c6Sstefano_zampini   pcbddc->symmetric_primal          = PETSC_TRUE;
21969326c5c6Sstefano_zampini   pcbddc->vertex_size               = 1;
21979326c5c6Sstefano_zampini   pcbddc->recompute_topography      = PETSC_TRUE;
21989326c5c6Sstefano_zampini   pcbddc->coarse_size               = -1;
21999326c5c6Sstefano_zampini   pcbddc->use_exact_dirichlet_trick = PETSC_TRUE;
22009326c5c6Sstefano_zampini   pcbddc->coarsening_ratio          = 8;
22019326c5c6Sstefano_zampini   pcbddc->coarse_eqs_per_proc       = 1;
22029326c5c6Sstefano_zampini   pcbddc->benign_compute_correction = PETSC_TRUE;
22039326c5c6Sstefano_zampini   pcbddc->nedfield                  = -1;
22049326c5c6Sstefano_zampini   pcbddc->nedglobal                 = PETSC_TRUE;
22059326c5c6Sstefano_zampini   pcbddc->graphmaxcount             = PETSC_MAX_INT;
22069326c5c6Sstefano_zampini   pcbddc->sub_schurs_layers         = -1;
22079326c5c6Sstefano_zampini   pcbddc->ksp_D                     = kspD;
22089326c5c6Sstefano_zampini   pcbddc->ksp_R                     = kspR;
22099326c5c6Sstefano_zampini   pcbddc->coarse_ksp                = kspC;
22109326c5c6Sstefano_zampini   PetscFunctionReturn(0);
22119326c5c6Sstefano_zampini }
22129326c5c6Sstefano_zampini 
22139326c5c6Sstefano_zampini #undef __FUNCT__
22149326c5c6Sstefano_zampini #define __FUNCT__ "PCDestroy_BDDC"
22159326c5c6Sstefano_zampini PetscErrorCode PCDestroy_BDDC(PC pc)
22169326c5c6Sstefano_zampini {
22179326c5c6Sstefano_zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
22189326c5c6Sstefano_zampini   PetscErrorCode ierr;
22199326c5c6Sstefano_zampini 
22209326c5c6Sstefano_zampini   PetscFunctionBegin;
22219326c5c6Sstefano_zampini   ierr = PCReset_BDDC(pc);CHKERRQ(ierr);
22229326c5c6Sstefano_zampini   ierr = KSPDestroy(&pcbddc->ksp_D);CHKERRQ(ierr);
22239326c5c6Sstefano_zampini   ierr = KSPDestroy(&pcbddc->ksp_R);CHKERRQ(ierr);
22249326c5c6Sstefano_zampini   ierr = KSPDestroy(&pcbddc->coarse_ksp);CHKERRQ(ierr);
2225a13144ffSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDiscreteGradient_C",NULL);CHKERRQ(ierr);
2226a198735bSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDivergenceMat_C",NULL);CHKERRQ(ierr);
2227906d46d4SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetChangeOfBasisMat_C",NULL);CHKERRQ(ierr);
2228674ae819SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetPrimalVerticesLocalIS_C",NULL);CHKERRQ(ierr);
222930368db7SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetPrimalVerticesIS_C",NULL);CHKERRQ(ierr);
2230bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetCoarseningRatio_C",NULL);CHKERRQ(ierr);
22312b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevel_C",NULL);CHKERRQ(ierr);
2232b8ffe317SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetUseExactDirichlet_C",NULL);CHKERRQ(ierr);
22332b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevels_C",NULL);CHKERRQ(ierr);
2234bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundaries_C",NULL);CHKERRQ(ierr);
223582ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundariesLocal_C",NULL);CHKERRQ(ierr);
2236bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundaries_C",NULL);CHKERRQ(ierr);
223782ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundariesLocal_C",NULL);CHKERRQ(ierr);
2238bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundaries_C",NULL);CHKERRQ(ierr);
223982ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundariesLocal_C",NULL);CHKERRQ(ierr);
2240bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundaries_C",NULL);CHKERRQ(ierr);
2241785d1243SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundariesLocal_C",NULL);CHKERRQ(ierr);
2242bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplitting_C",NULL);CHKERRQ(ierr);
224363602bcaSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplittingLocal_C",NULL);CHKERRQ(ierr);
2244bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",NULL);CHKERRQ(ierr);
2245bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCCreateFETIDPOperators_C",NULL);CHKERRQ(ierr);
2246bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetRHS_C",NULL);CHKERRQ(ierr);
2247bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetSolution_C",NULL);CHKERRQ(ierr);
2248a06fd7f2SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCPreSolveChangeRHS_C",NULL);CHKERRQ(ierr);
2249674ae819SStefano Zampini   ierr = PetscFree(pc->data);CHKERRQ(ierr);
2250da1bb401SStefano Zampini   PetscFunctionReturn(0);
2251da1bb401SStefano Zampini }
22521e6b0712SBarry Smith 
22533425bc38SStefano Zampini #undef __FUNCT__
2254a06fd7f2SStefano Zampini #define __FUNCT__ "PCPreSolveChangeRHS_BDDC"
2255a06fd7f2SStefano Zampini static PetscErrorCode PCPreSolveChangeRHS_BDDC(PC pc, PetscBool* change)
2256a06fd7f2SStefano Zampini {
2257a06fd7f2SStefano Zampini   PetscFunctionBegin;
2258a06fd7f2SStefano Zampini   *change = PETSC_TRUE;
2259a06fd7f2SStefano Zampini   PetscFunctionReturn(0);
2260a06fd7f2SStefano Zampini }
2261a06fd7f2SStefano Zampini 
2262a06fd7f2SStefano Zampini #undef __FUNCT__
22633425bc38SStefano Zampini #define __FUNCT__ "PCBDDCMatFETIDPGetRHS_BDDC"
22643425bc38SStefano Zampini static PetscErrorCode PCBDDCMatFETIDPGetRHS_BDDC(Mat fetidp_mat, Vec standard_rhs, Vec fetidp_flux_rhs)
22653425bc38SStefano Zampini {
2266674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
2267266e20e9SStefano Zampini   Vec            work;
22683425bc38SStefano Zampini   PC_IS*         pcis;
22693425bc38SStefano Zampini   PC_BDDC*       pcbddc;
22703425bc38SStefano Zampini   PetscErrorCode ierr;
22710c7d97c5SJed Brown 
22723425bc38SStefano Zampini   PetscFunctionBegin;
22733425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
22743425bc38SStefano Zampini   pcis = (PC_IS*)mat_ctx->pc->data;
22753425bc38SStefano Zampini   pcbddc = (PC_BDDC*)mat_ctx->pc->data;
22763425bc38SStefano Zampini 
2277229984c5Sstefano_zampini   ierr = VecSet(fetidp_flux_rhs,0.0);CHKERRQ(ierr);
2278229984c5Sstefano_zampini   /* copy rhs since we may change it during PCPreSolve_BDDC */
2279229984c5Sstefano_zampini   if (!pcbddc->original_rhs) {
2280229984c5Sstefano_zampini     ierr = VecDuplicate(pcis->vec1_global,&pcbddc->original_rhs);CHKERRQ(ierr);
2281229984c5Sstefano_zampini   }
22826cc1294bSstefano_zampini   if (mat_ctx->rhs_flip) {
22836cc1294bSstefano_zampini     ierr = VecPointwiseMult(pcbddc->original_rhs,standard_rhs,mat_ctx->rhs_flip);CHKERRQ(ierr);
22846cc1294bSstefano_zampini   } else {
2285229984c5Sstefano_zampini     ierr = VecCopy(standard_rhs,pcbddc->original_rhs);CHKERRQ(ierr);
22866cc1294bSstefano_zampini   }
2287af140850Sstefano_zampini   if (mat_ctx->g2g_p) {
2288229984c5Sstefano_zampini     /* interface pressure rhs */
2289022d8d2bSstefano_zampini     ierr = VecScatterBegin(mat_ctx->g2g_p,fetidp_flux_rhs,pcbddc->original_rhs,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2290022d8d2bSstefano_zampini     ierr = VecScatterEnd(mat_ctx->g2g_p,fetidp_flux_rhs,pcbddc->original_rhs,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2291229984c5Sstefano_zampini     ierr = VecScatterBegin(mat_ctx->g2g_p,standard_rhs,fetidp_flux_rhs,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2292229984c5Sstefano_zampini     ierr = VecScatterEnd(mat_ctx->g2g_p,standard_rhs,fetidp_flux_rhs,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
22936cc1294bSstefano_zampini     if (!mat_ctx->rhs_flip) {
2294229984c5Sstefano_zampini       ierr = VecScale(fetidp_flux_rhs,-1.);CHKERRQ(ierr);
2295229984c5Sstefano_zampini     }
22966cc1294bSstefano_zampini   }
2297c08af4c6SStefano Zampini   /*
2298c08af4c6SStefano Zampini      change of basis for physical rhs if needed
2299c08af4c6SStefano Zampini      It also changes the rhs in case of dirichlet boundaries
2300c08af4c6SStefano Zampini   */
23013738a8e6SStefano Zampini   ierr = PCPreSolve_BDDC(mat_ctx->pc,NULL,pcbddc->original_rhs,NULL);CHKERRQ(ierr);
2302fc17d649SStefano Zampini   if (pcbddc->ChangeOfBasisMatrix) {
23033738a8e6SStefano Zampini     ierr = MatMultTranspose(pcbddc->ChangeOfBasisMatrix,pcbddc->original_rhs,pcbddc->work_change);CHKERRQ(ierr);
23043738a8e6SStefano Zampini     work = pcbddc->work_change;
2305fc17d649SStefano Zampini    } else {
23063738a8e6SStefano Zampini     work = pcbddc->original_rhs;
2307fc17d649SStefano Zampini   }
23083425bc38SStefano Zampini   /* store vectors for computation of fetidp final solution */
2309266e20e9SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_D,work,mat_ctx->temp_solution_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2310266e20e9SStefano Zampini   ierr = VecScatterEnd(pcis->global_to_D,work,mat_ctx->temp_solution_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2311fb223d50SStefano Zampini   /* scale rhs since it should be unassembled */
2312fb223d50SStefano Zampini   /* TODO use counter scaling? (also below) */
2313266e20e9SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_B,work,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2314266e20e9SStefano Zampini   ierr = VecScatterEnd(pcis->global_to_B,work,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2315674ae819SStefano Zampini   /* Apply partition of unity */
23163425bc38SStefano Zampini   ierr = VecPointwiseMult(mat_ctx->temp_solution_B,pcis->D,mat_ctx->temp_solution_B);CHKERRQ(ierr);
2317266e20e9SStefano Zampini   /* ierr = PCBDDCScalingRestriction(mat_ctx->pc,work,mat_ctx->temp_solution_B);CHKERRQ(ierr); */
23188eeda7d8SStefano Zampini   if (!pcbddc->switch_static) {
23193425bc38SStefano Zampini     /* compute partially subassembled Schur complement right-hand side */
23203425bc38SStefano Zampini     ierr = KSPSolve(pcbddc->ksp_D,mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr);
23213425bc38SStefano Zampini     ierr = MatMult(pcis->A_BI,pcis->vec1_D,pcis->vec1_B);CHKERRQ(ierr);
23223425bc38SStefano Zampini     ierr = VecAXPY(mat_ctx->temp_solution_B,-1.0,pcis->vec1_B);CHKERRQ(ierr);
2323266e20e9SStefano Zampini     ierr = VecSet(work,0.0);CHKERRQ(ierr);
2324266e20e9SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,mat_ctx->temp_solution_B,work,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2325266e20e9SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_B,mat_ctx->temp_solution_B,work,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2326266e20e9SStefano Zampini     /* ierr = PCBDDCScalingRestriction(mat_ctx->pc,work,mat_ctx->temp_solution_B);CHKERRQ(ierr); */
2327266e20e9SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,work,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2328266e20e9SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_B,work,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
23293425bc38SStefano Zampini     ierr = VecPointwiseMult(mat_ctx->temp_solution_B,pcis->D,mat_ctx->temp_solution_B);CHKERRQ(ierr);
23303425bc38SStefano Zampini   }
23313425bc38SStefano Zampini   /* BDDC rhs */
23323425bc38SStefano Zampini   ierr = VecCopy(mat_ctx->temp_solution_B,pcis->vec1_B);CHKERRQ(ierr);
23338eeda7d8SStefano Zampini   if (pcbddc->switch_static) {
23343425bc38SStefano Zampini     ierr = VecCopy(mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr);
23353425bc38SStefano Zampini   }
23363425bc38SStefano Zampini   /* apply BDDC */
2337229984c5Sstefano_zampini   ierr = PetscMemzero(pcbddc->benign_p0,pcbddc->benign_n*sizeof(PetscScalar));CHKERRQ(ierr);
2338dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(mat_ctx->pc,PETSC_FALSE);CHKERRQ(ierr);
2339266e20e9SStefano Zampini   ierr = PetscMemzero(pcbddc->benign_p0,pcbddc->benign_n*sizeof(PetscScalar));CHKERRQ(ierr);
2340229984c5Sstefano_zampini 
23413425bc38SStefano Zampini   /* Application of B_delta and assembling of rhs for fetidp fluxes */
23423425bc38SStefano Zampini   ierr = MatMult(mat_ctx->B_delta,pcis->vec1_B,mat_ctx->lambda_local);CHKERRQ(ierr);
23433425bc38SStefano Zampini   ierr = VecScatterBegin(mat_ctx->l2g_lambda,mat_ctx->lambda_local,fetidp_flux_rhs,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
23443425bc38SStefano Zampini   ierr = VecScatterEnd(mat_ctx->l2g_lambda,mat_ctx->lambda_local,fetidp_flux_rhs,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2345229984c5Sstefano_zampini   /* Add contribution to interface pressures */
2346229984c5Sstefano_zampini   if (mat_ctx->l2g_p) {
2347229984c5Sstefano_zampini     ierr = MatMult(mat_ctx->B_BB,pcis->vec1_B,mat_ctx->vP);CHKERRQ(ierr);
2348229984c5Sstefano_zampini     if (pcbddc->switch_static) {
2349229984c5Sstefano_zampini       ierr = MatMultAdd(mat_ctx->B_BI,pcis->vec1_D,mat_ctx->vP,mat_ctx->vP);CHKERRQ(ierr);
2350229984c5Sstefano_zampini     }
2351229984c5Sstefano_zampini     ierr = VecScatterBegin(mat_ctx->l2g_p,mat_ctx->vP,fetidp_flux_rhs,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2352229984c5Sstefano_zampini     ierr = VecScatterEnd(mat_ctx->l2g_p,mat_ctx->vP,fetidp_flux_rhs,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2353229984c5Sstefano_zampini   }
23543425bc38SStefano Zampini   PetscFunctionReturn(0);
23553425bc38SStefano Zampini }
23561e6b0712SBarry Smith 
23573425bc38SStefano Zampini #undef __FUNCT__
23583425bc38SStefano Zampini #define __FUNCT__ "PCBDDCMatFETIDPGetRHS"
23593425bc38SStefano Zampini /*@
23600f202f7eSStefano Zampini  PCBDDCMatFETIDPGetRHS - Compute the right-hand side for FETI-DP linear system using the physical right-hand side
23613425bc38SStefano Zampini 
23623425bc38SStefano Zampini    Collective
23633425bc38SStefano Zampini 
23643425bc38SStefano Zampini    Input Parameters:
23650f202f7eSStefano Zampini +  fetidp_mat      - the FETI-DP matrix object obtained by a call to PCBDDCCreateFETIDPOperators
23660f202f7eSStefano Zampini -  standard_rhs    - the right-hand side of the original linear system
23673425bc38SStefano Zampini 
23683425bc38SStefano Zampini    Output Parameters:
23690f202f7eSStefano Zampini .  fetidp_flux_rhs - the right-hand side for the FETI-DP linear system
23703425bc38SStefano Zampini 
23713425bc38SStefano Zampini    Level: developer
23723425bc38SStefano Zampini 
23733425bc38SStefano Zampini    Notes:
23743425bc38SStefano Zampini 
23750f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCCreateFETIDPOperators, PCBDDCMatFETIDPGetSolution
23763425bc38SStefano Zampini @*/
23773425bc38SStefano Zampini PetscErrorCode PCBDDCMatFETIDPGetRHS(Mat fetidp_mat, Vec standard_rhs, Vec fetidp_flux_rhs)
23783425bc38SStefano Zampini {
2379674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
23803425bc38SStefano Zampini   PetscErrorCode ierr;
23813425bc38SStefano Zampini 
23823425bc38SStefano Zampini   PetscFunctionBegin;
2383266e20e9SStefano Zampini   PetscValidHeaderSpecific(fetidp_mat,MAT_CLASSID,1);
2384266e20e9SStefano Zampini   PetscValidHeaderSpecific(standard_rhs,VEC_CLASSID,2);
2385266e20e9SStefano Zampini   PetscValidHeaderSpecific(fetidp_flux_rhs,VEC_CLASSID,3);
23863425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
2387163d334eSBarry Smith   ierr = PetscUseMethod(mat_ctx->pc,"PCBDDCMatFETIDPGetRHS_C",(Mat,Vec,Vec),(fetidp_mat,standard_rhs,fetidp_flux_rhs));CHKERRQ(ierr);
23883425bc38SStefano Zampini   PetscFunctionReturn(0);
23893425bc38SStefano Zampini }
23901e6b0712SBarry Smith 
23913425bc38SStefano Zampini #undef __FUNCT__
23923425bc38SStefano Zampini #define __FUNCT__ "PCBDDCMatFETIDPGetSolution_BDDC"
23933425bc38SStefano Zampini static PetscErrorCode PCBDDCMatFETIDPGetSolution_BDDC(Mat fetidp_mat, Vec fetidp_flux_sol, Vec standard_sol)
23943425bc38SStefano Zampini {
2395674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
23963425bc38SStefano Zampini   PC_IS*         pcis;
23973425bc38SStefano Zampini   PC_BDDC*       pcbddc;
23983425bc38SStefano Zampini   PetscErrorCode ierr;
2399229984c5Sstefano_zampini   Vec            work;
24003425bc38SStefano Zampini 
24013425bc38SStefano Zampini   PetscFunctionBegin;
24023425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
24033425bc38SStefano Zampini   pcis = (PC_IS*)mat_ctx->pc->data;
24043425bc38SStefano Zampini   pcbddc = (PC_BDDC*)mat_ctx->pc->data;
24053425bc38SStefano Zampini 
24063425bc38SStefano Zampini   /* apply B_delta^T */
2407af140850Sstefano_zampini   ierr = VecSet(pcis->vec1_B,0.);CHKERRQ(ierr);
24083425bc38SStefano Zampini   ierr = VecScatterBegin(mat_ctx->l2g_lambda,fetidp_flux_sol,mat_ctx->lambda_local,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
24093425bc38SStefano Zampini   ierr = VecScatterEnd(mat_ctx->l2g_lambda,fetidp_flux_sol,mat_ctx->lambda_local,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
24103425bc38SStefano Zampini   ierr = MatMultTranspose(mat_ctx->B_delta,mat_ctx->lambda_local,pcis->vec1_B);CHKERRQ(ierr);
2411229984c5Sstefano_zampini   if (mat_ctx->l2g_p) {
2412229984c5Sstefano_zampini     ierr = VecScatterBegin(mat_ctx->l2g_p,fetidp_flux_sol,mat_ctx->vP,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2413229984c5Sstefano_zampini     ierr = VecScatterEnd(mat_ctx->l2g_p,fetidp_flux_sol,mat_ctx->vP,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2414229984c5Sstefano_zampini     ierr = MatMultAdd(mat_ctx->Bt_BB,mat_ctx->vP,pcis->vec1_B,pcis->vec1_B);CHKERRQ(ierr);
2415229984c5Sstefano_zampini   }
2416229984c5Sstefano_zampini 
24173425bc38SStefano Zampini   /* compute rhs for BDDC application */
24183425bc38SStefano Zampini   ierr = VecAYPX(pcis->vec1_B,-1.0,mat_ctx->temp_solution_B);CHKERRQ(ierr);
24198eeda7d8SStefano Zampini   if (pcbddc->switch_static) {
24203425bc38SStefano Zampini     ierr = VecCopy(mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr);
2421229984c5Sstefano_zampini     if (mat_ctx->l2g_p) {
2422229984c5Sstefano_zampini       ierr = VecScale(mat_ctx->vP,-1.);CHKERRQ(ierr);
2423229984c5Sstefano_zampini       ierr = MatMultAdd(mat_ctx->Bt_BI,mat_ctx->vP,pcis->vec1_D,pcis->vec1_D);CHKERRQ(ierr);
24243425bc38SStefano Zampini     }
2425229984c5Sstefano_zampini   }
2426229984c5Sstefano_zampini 
24273425bc38SStefano Zampini   /* apply BDDC */
2428229984c5Sstefano_zampini   ierr = PetscMemzero(pcbddc->benign_p0,pcbddc->benign_n*sizeof(PetscScalar));CHKERRQ(ierr);
2429dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(mat_ctx->pc,PETSC_FALSE);CHKERRQ(ierr);
2430229984c5Sstefano_zampini 
2431229984c5Sstefano_zampini   /* put values into global vector */
2432af140850Sstefano_zampini   if (pcbddc->ChangeOfBasisMatrix) work = pcbddc->work_change;
2433af140850Sstefano_zampini   else work = standard_sol;
2434229984c5Sstefano_zampini   ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,work,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2435229984c5Sstefano_zampini   ierr = VecScatterEnd(pcis->global_to_B,pcis->vec1_B,work,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
24368eeda7d8SStefano Zampini   if (!pcbddc->switch_static) {
24373425bc38SStefano Zampini     /* compute values into the interior if solved for the partially subassembled Schur complement */
24383425bc38SStefano Zampini     ierr = MatMult(pcis->A_IB,pcis->vec1_B,pcis->vec1_D);CHKERRQ(ierr);
243900f6b531SStefano Zampini     ierr = VecAYPX(pcis->vec1_D,-1.0,mat_ctx->temp_solution_D);CHKERRQ(ierr);
244000f6b531SStefano Zampini     ierr = KSPSolve(pcbddc->ksp_D,pcis->vec1_D,pcis->vec1_D);CHKERRQ(ierr);
24413425bc38SStefano Zampini   }
2442229984c5Sstefano_zampini 
2443229984c5Sstefano_zampini   ierr = VecScatterBegin(pcis->global_to_D,pcis->vec1_D,work,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2444229984c5Sstefano_zampini   ierr = VecScatterEnd(pcis->global_to_D,pcis->vec1_D,work,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2445266e20e9SStefano Zampini   /* add p0 solution to final solution */
2446229984c5Sstefano_zampini   ierr = PCBDDCBenignGetOrSetP0(mat_ctx->pc,work,PETSC_FALSE);CHKERRQ(ierr);
2447fc17d649SStefano Zampini   if (pcbddc->ChangeOfBasisMatrix) {
2448af140850Sstefano_zampini     ierr = MatMult(pcbddc->ChangeOfBasisMatrix,work,standard_sol);CHKERRQ(ierr);
2449fc17d649SStefano Zampini   }
2450af140850Sstefano_zampini   ierr = PCPostSolve_BDDC(mat_ctx->pc,NULL,NULL,standard_sol);CHKERRQ(ierr);
2451af140850Sstefano_zampini   if (mat_ctx->g2g_p) {
2452229984c5Sstefano_zampini     ierr = VecScatterBegin(mat_ctx->g2g_p,fetidp_flux_sol,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2453229984c5Sstefano_zampini     ierr = VecScatterEnd(mat_ctx->g2g_p,fetidp_flux_sol,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2454229984c5Sstefano_zampini   }
24553425bc38SStefano Zampini   PetscFunctionReturn(0);
24563425bc38SStefano Zampini }
24571e6b0712SBarry Smith 
24583425bc38SStefano Zampini #undef __FUNCT__
24593425bc38SStefano Zampini #define __FUNCT__ "PCBDDCMatFETIDPGetSolution"
24603425bc38SStefano Zampini /*@
24610f202f7eSStefano Zampini  PCBDDCMatFETIDPGetSolution - Compute the physical solution using the solution of the FETI-DP linear system
24623425bc38SStefano Zampini 
24633425bc38SStefano Zampini    Collective
24643425bc38SStefano Zampini 
24653425bc38SStefano Zampini    Input Parameters:
24660f202f7eSStefano Zampini +  fetidp_mat      - the FETI-DP matrix obtained by a call to PCBDDCCreateFETIDPOperators
24670f202f7eSStefano Zampini -  fetidp_flux_sol - the solution of the FETI-DP linear system
24683425bc38SStefano Zampini 
24693425bc38SStefano Zampini    Output Parameters:
24700f202f7eSStefano Zampini .  standard_sol    - the solution defined on the physical domain
24713425bc38SStefano Zampini 
24723425bc38SStefano Zampini    Level: developer
24733425bc38SStefano Zampini 
24743425bc38SStefano Zampini    Notes:
24753425bc38SStefano Zampini 
24760f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCCreateFETIDPOperators, PCBDDCMatFETIDPGetRHS
24773425bc38SStefano Zampini @*/
24783425bc38SStefano Zampini PetscErrorCode PCBDDCMatFETIDPGetSolution(Mat fetidp_mat, Vec fetidp_flux_sol, Vec standard_sol)
24793425bc38SStefano Zampini {
2480674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
24813425bc38SStefano Zampini   PetscErrorCode ierr;
24823425bc38SStefano Zampini 
24833425bc38SStefano Zampini   PetscFunctionBegin;
2484266e20e9SStefano Zampini   PetscValidHeaderSpecific(fetidp_mat,MAT_CLASSID,1);
2485266e20e9SStefano Zampini   PetscValidHeaderSpecific(fetidp_flux_sol,VEC_CLASSID,2);
2486266e20e9SStefano Zampini   PetscValidHeaderSpecific(standard_sol,VEC_CLASSID,3);
24873425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
2488163d334eSBarry Smith   ierr = PetscUseMethod(mat_ctx->pc,"PCBDDCMatFETIDPGetSolution_C",(Mat,Vec,Vec),(fetidp_mat,fetidp_flux_sol,standard_sol));CHKERRQ(ierr);
24893425bc38SStefano Zampini   PetscFunctionReturn(0);
24903425bc38SStefano Zampini }
24911e6b0712SBarry Smith 
24923425bc38SStefano Zampini #undef __FUNCT__
24933425bc38SStefano Zampini #define __FUNCT__ "PCBDDCCreateFETIDPOperators_BDDC"
2494547c9a8eSstefano_zampini static PetscErrorCode PCBDDCCreateFETIDPOperators_BDDC(PC pc, PetscBool fully_redundant, const char* prefix, Mat *fetidp_mat, PC *fetidp_pc)
24953425bc38SStefano Zampini {
2496674ae819SStefano Zampini 
2497674ae819SStefano Zampini   FETIDPMat_ctx  fetidpmat_ctx;
24983425bc38SStefano Zampini   Mat            newmat;
2499674ae819SStefano Zampini   FETIDPPC_ctx   fetidppc_ctx;
25003425bc38SStefano Zampini   PC             newpc;
2501ce94432eSBarry Smith   MPI_Comm       comm;
25023425bc38SStefano Zampini   PetscErrorCode ierr;
25033425bc38SStefano Zampini 
25043425bc38SStefano Zampini   PetscFunctionBegin;
2505ce94432eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr);
25063425bc38SStefano Zampini   /* FETIDP linear matrix */
25073425bc38SStefano Zampini   ierr = PCBDDCCreateFETIDPMatContext(pc,&fetidpmat_ctx);CHKERRQ(ierr);
25081720468bSStefano Zampini   fetidpmat_ctx->fully_redundant = fully_redundant;
25093425bc38SStefano Zampini   ierr = PCBDDCSetupFETIDPMatContext(fetidpmat_ctx);CHKERRQ(ierr);
2510a5bb87b3Sstefano_zampini   ierr = MatCreateShell(comm,fetidpmat_ctx->n,fetidpmat_ctx->n,fetidpmat_ctx->N,fetidpmat_ctx->N,fetidpmat_ctx,&newmat);CHKERRQ(ierr);
25113425bc38SStefano Zampini   ierr = MatShellSetOperation(newmat,MATOP_MULT,(void (*)(void))FETIDPMatMult);CHKERRQ(ierr);
2512edf7251bSStefano Zampini   ierr = MatShellSetOperation(newmat,MATOP_MULT_TRANSPOSE,(void (*)(void))FETIDPMatMultTranspose);CHKERRQ(ierr);
25133425bc38SStefano Zampini   ierr = MatShellSetOperation(newmat,MATOP_DESTROY,(void (*)(void))PCBDDCDestroyFETIDPMat);CHKERRQ(ierr);
2514547c9a8eSstefano_zampini   ierr = MatSetOptionsPrefix(newmat,prefix);CHKERRQ(ierr);
2515547c9a8eSstefano_zampini   ierr = MatAppendOptionsPrefix(newmat,"fetidp_");CHKERRQ(ierr);
25163425bc38SStefano Zampini   ierr = MatSetUp(newmat);CHKERRQ(ierr);
25173425bc38SStefano Zampini   /* FETIDP preconditioner */
25183425bc38SStefano Zampini   ierr = PCBDDCCreateFETIDPPCContext(pc,&fetidppc_ctx);CHKERRQ(ierr);
25193425bc38SStefano Zampini   ierr = PCBDDCSetupFETIDPPCContext(newmat,fetidppc_ctx);CHKERRQ(ierr);
25203425bc38SStefano Zampini   ierr = PCCreate(comm,&newpc);CHKERRQ(ierr);
25213425bc38SStefano Zampini   ierr = PCSetType(newpc,PCSHELL);CHKERRQ(ierr);
25223425bc38SStefano Zampini   ierr = PCShellSetContext(newpc,fetidppc_ctx);CHKERRQ(ierr);
25233425bc38SStefano Zampini   ierr = PCShellSetApply(newpc,FETIDPPCApply);CHKERRQ(ierr);
2524edf7251bSStefano Zampini   ierr = PCShellSetApplyTranspose(newpc,FETIDPPCApplyTranspose);CHKERRQ(ierr);
2525c45b8d2dSstefano_zampini   ierr = PCShellSetView(newpc,FETIDPPCView);CHKERRQ(ierr);
25263425bc38SStefano Zampini   ierr = PCShellSetDestroy(newpc,PCBDDCDestroyFETIDPPC);CHKERRQ(ierr);
252723ee1639SBarry Smith   ierr = PCSetOperators(newpc,newmat,newmat);CHKERRQ(ierr);
2528547c9a8eSstefano_zampini   ierr = PCSetOptionsPrefix(newpc,prefix);CHKERRQ(ierr);
2529547c9a8eSstefano_zampini   ierr = PCAppendOptionsPrefix(newpc,"fetidp_");CHKERRQ(ierr);
25303425bc38SStefano Zampini   /* return pointers for objects created */
25313425bc38SStefano Zampini   *fetidp_mat=newmat;
25323425bc38SStefano Zampini   *fetidp_pc=newpc;
25333425bc38SStefano Zampini   PetscFunctionReturn(0);
25343425bc38SStefano Zampini }
25351e6b0712SBarry Smith 
25363425bc38SStefano Zampini #undef __FUNCT__
25373425bc38SStefano Zampini #define __FUNCT__ "PCBDDCCreateFETIDPOperators"
25383425bc38SStefano Zampini /*@
25390f202f7eSStefano Zampini  PCBDDCCreateFETIDPOperators - Create FETI-DP operators
25403425bc38SStefano Zampini 
25413425bc38SStefano Zampini    Collective
25423425bc38SStefano Zampini 
25433425bc38SStefano Zampini    Input Parameters:
25441720468bSStefano Zampini +  pc - the BDDC preconditioning context (setup should have been called before)
2545547c9a8eSstefano_zampini .  fully_redundant - true for a fully redundant set of Lagrange multipliers
2546547c9a8eSstefano_zampini -  prefix - optional options database prefix for the objects to be created (can be NULL)
254728509bceSStefano Zampini 
254828509bceSStefano Zampini    Output Parameters:
25490f202f7eSStefano Zampini +  fetidp_mat - shell FETI-DP matrix object
25500f202f7eSStefano Zampini -  fetidp_pc  - shell Dirichlet preconditioner for FETI-DP matrix
255128509bceSStefano Zampini 
25523425bc38SStefano Zampini    Level: developer
25533425bc38SStefano Zampini 
25543425bc38SStefano Zampini    Notes:
25550f202f7eSStefano Zampini      Currently the only operations provided for FETI-DP matrix are MatMult and MatMultTranspose
25563425bc38SStefano Zampini 
25570f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCMatFETIDPGetRHS, PCBDDCMatFETIDPGetSolution
25583425bc38SStefano Zampini @*/
2559547c9a8eSstefano_zampini PetscErrorCode PCBDDCCreateFETIDPOperators(PC pc, PetscBool fully_redundant, const char *prefix, Mat *fetidp_mat, PC *fetidp_pc)
25603425bc38SStefano Zampini {
25613425bc38SStefano Zampini   PetscErrorCode ierr;
25623425bc38SStefano Zampini 
25633425bc38SStefano Zampini   PetscFunctionBegin;
25643425bc38SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
25653425bc38SStefano Zampini   if (pc->setupcalled) {
2566547c9a8eSstefano_zampini     ierr = PetscUseMethod(pc,"PCBDDCCreateFETIDPOperators_C",(PC,PetscBool,const char*,Mat*,PC*),(pc,fully_redundant,prefix,fetidp_mat,fetidp_pc));CHKERRQ(ierr);
2567f23aa3ddSBarry Smith   } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"You must call PCSetup_BDDC() first \n");
25683425bc38SStefano Zampini   PetscFunctionReturn(0);
25693425bc38SStefano Zampini }
25700c7d97c5SJed Brown /* -------------------------------------------------------------------------- */
2571da1bb401SStefano Zampini /*MC
2572da1bb401SStefano Zampini    PCBDDC - Balancing Domain Decomposition by Constraints.
25730c7d97c5SJed Brown 
257428509bceSStefano Zampini    An implementation of the BDDC preconditioner based on
257528509bceSStefano Zampini 
257628509bceSStefano Zampini .vb
257728509bceSStefano Zampini    [1] C. R. Dohrmann. "An approximate BDDC preconditioner", Numerical Linear Algebra with Applications Volume 14, Issue 2, pages 149-168, March 2007
257828509bceSStefano Zampini    [2] A. Klawonn and O. B. Widlund. "Dual-Primal FETI Methods for Linear Elasticity", http://cs.nyu.edu/csweb/Research/TechReports/TR2004-855/TR2004-855.pdf
257928509bceSStefano Zampini    [3] J. Mandel, B. Sousedik, C. R. Dohrmann. "Multispace and Multilevel BDDC", http://arxiv.org/abs/0712.3977
25800f202f7eSStefano Zampini    [4] C. Pechstein and C. R. Dohrmann. "Modern domain decomposition methods BDDC, deluxe scaling, and an algebraic approach", Seminar talk, Linz, December 2013, http://people.ricam.oeaw.ac.at/c.pechstein/pechstein-bddc2013.pdf
258128509bceSStefano Zampini .ve
258228509bceSStefano Zampini 
258328509bceSStefano Zampini    The matrix to be preconditioned (Pmat) must be of type MATIS.
258428509bceSStefano Zampini 
25850f202f7eSStefano Zampini    Currently works with MATIS matrices with local matrices of type MATSEQAIJ, MATSEQBAIJ or MATSEQSBAIJ, either with real or complex numbers.
258628509bceSStefano Zampini 
258728509bceSStefano Zampini    It also works with unsymmetric and indefinite problems.
258828509bceSStefano Zampini 
2589b6fdb6dfSStefano Zampini    Unlike 'conventional' interface preconditioners, PCBDDC iterates over all degrees of freedom, not just those on the interface. This allows the use of approximate solvers on the subdomains.
2590b6fdb6dfSStefano Zampini 
2591c7017625SStefano Zampini    Approximate local solvers are automatically adapted (see [1]) if the user has attached a nullspace object to the subdomain matrices, and informed BDDC of using approximate solvers (via the command line).
259228509bceSStefano Zampini 
25930f202f7eSStefano Zampini    Boundary nodes are split in vertices, edges and faces classes using information from the local to global mapping of dofs and the local connectivity graph of nodes. The latter can be customized by using PCBDDCSetLocalAdjacencyGraph()
259430368db7SStefano Zampini    Additional information on dofs can be provided by using PCBDDCSetDofsSplitting(), PCBDDCSetDirichletBoundaries(), PCBDDCSetNeumannBoundaries(), and PCBDDCSetPrimalVerticesIS() and their local counterparts.
259528509bceSStefano Zampini 
25960f202f7eSStefano Zampini    Constraints can be customized by attaching a MatNullSpace object to the MATIS matrix via MatSetNearNullSpace(). Non-singular modes are retained via SVD.
259728509bceSStefano Zampini 
25980f202f7eSStefano Zampini    Change of basis is performed similarly to [2] when requested. When more than one constraint is present on a single connected component (i.e. an edge or a face), a robust method based on local QR factorizations is used.
25990f202f7eSStefano Zampini    User defined change of basis can be passed to PCBDDC by using PCBDDCSetChangeOfBasisMat()
260028509bceSStefano Zampini 
26010f202f7eSStefano Zampini    The PETSc implementation also supports multilevel BDDC [3]. Coarse grids are partitioned using a MatPartitioning object.
260228509bceSStefano Zampini 
2603df4d28bfSStefano Zampini    Adaptive selection of primal constraints [4] is supported for SPD systems with high-contrast in the coefficients if MUMPS or MKL_PARDISO are present. Future versions of the code will also consider using PASTIX.
260428509bceSStefano Zampini 
26050f202f7eSStefano Zampini    An experimental interface to the FETI-DP method is available. FETI-DP operators could be created using PCBDDCCreateFETIDPOperators(). A stand-alone class for the FETI-DP method will be provided in the next releases.
26060f202f7eSStefano Zampini    Deluxe scaling is not supported yet for FETI-DP.
26070f202f7eSStefano Zampini 
26080f202f7eSStefano Zampini    Options Database Keys (some of them, run with -h for a complete list):
26090f202f7eSStefano Zampini 
26100f202f7eSStefano Zampini .    -pc_bddc_use_vertices <true> - use or not vertices in primal space
26110f202f7eSStefano Zampini .    -pc_bddc_use_edges <true> - use or not edges in primal space
26120f202f7eSStefano Zampini .    -pc_bddc_use_faces <false> - use or not faces in primal space
26130f202f7eSStefano Zampini .    -pc_bddc_symmetric <true> - symmetric computation of primal basis functions. Specify false for unsymmetric problems
26140f202f7eSStefano Zampini .    -pc_bddc_use_change_of_basis <false> - use change of basis approach (on edges only)
26150f202f7eSStefano Zampini .    -pc_bddc_use_change_on_faces <false> - use change of basis approach on faces if change of basis has been requested
26160f202f7eSStefano Zampini .    -pc_bddc_switch_static <false> - switches from M_2 (default) to M_3 operator (see reference article [1])
261728509bceSStefano Zampini .    -pc_bddc_levels <0> - maximum number of levels for multilevel
26180f202f7eSStefano Zampini .    -pc_bddc_coarsening_ratio <8> - number of subdomains which will be aggregated together at the coarser level (e.g. H/h ratio at the coarser level, significative only in the multilevel case)
26190f202f7eSStefano Zampini .    -pc_bddc_redistribute <0> - size of a subset of processors where the coarse problem will be remapped (the value is ignored if not at the coarsest level)
26200f202f7eSStefano Zampini .    -pc_bddc_use_deluxe_scaling <false> - use deluxe scaling
26210f202f7eSStefano Zampini .    -pc_bddc_schur_layers <-1> - select the economic version of deluxe scaling by specifying the number of layers (-1 corresponds to the original deluxe scaling)
2622df4d28bfSStefano Zampini .    -pc_bddc_adaptive_threshold <0.0> - when a value greater than one is specified, adaptive selection of constraints is performed on edges and faces (requires deluxe scaling and MUMPS or MKL_PARDISO installed)
262328509bceSStefano Zampini -    -pc_bddc_check_level <0> - set verbosity level of debugging output
262428509bceSStefano Zampini 
262528509bceSStefano Zampini    Options for Dirichlet, Neumann or coarse solver can be set with
262628509bceSStefano Zampini .vb
262728509bceSStefano Zampini       -pc_bddc_dirichlet_
262828509bceSStefano Zampini       -pc_bddc_neumann_
262928509bceSStefano Zampini       -pc_bddc_coarse_
263028509bceSStefano Zampini .ve
26310f202f7eSStefano Zampini    e.g -pc_bddc_dirichlet_ksp_type richardson -pc_bddc_dirichlet_pc_type gamg. PCBDDC uses by default KPSPREONLY and PCLU.
263228509bceSStefano Zampini 
26330f202f7eSStefano Zampini    When using a multilevel approach, solvers' options at the N-th level (N > 1) can be specified as
263428509bceSStefano Zampini .vb
2635312be037SStefano Zampini       -pc_bddc_dirichlet_lN_
2636312be037SStefano Zampini       -pc_bddc_neumann_lN_
2637312be037SStefano Zampini       -pc_bddc_coarse_lN_
263828509bceSStefano Zampini .ve
26390f202f7eSStefano Zampini    Note that level number ranges from the finest (0) to the coarsest (N).
26400f202f7eSStefano Zampini    In order to specify options for the BDDC operators at the coarser levels (and not for the solvers), prepend -pc_bddc_coarse_ or -pc_bddc_coarse_l to the option, e.g.
26410f202f7eSStefano Zampini .vb
26420f202f7eSStefano Zampini      -pc_bddc_coarse_pc_bddc_adaptive_threshold 5 -pc_bddc_coarse_l1_pc_bddc_redistribute 3
26430f202f7eSStefano Zampini .ve
26440f202f7eSStefano Zampini    will use a threshold of 5 for constraints' selection at the first coarse level and will redistribute the coarse problem of the first coarse level on 3 processors
2645da1bb401SStefano Zampini 
2646da1bb401SStefano Zampini    Level: intermediate
2647da1bb401SStefano Zampini 
2648b6fdb6dfSStefano Zampini    Developer notes:
2649da1bb401SStefano Zampini 
2650da1bb401SStefano Zampini    Contributed by Stefano Zampini
2651da1bb401SStefano Zampini 
2652da1bb401SStefano Zampini .seealso:  PCCreate(), PCSetType(), PCType (for list of available types), PC,  MATIS
2653da1bb401SStefano Zampini M*/
2654b2573a8aSBarry Smith 
2655da1bb401SStefano Zampini #undef __FUNCT__
2656da1bb401SStefano Zampini #define __FUNCT__ "PCCreate_BDDC"
26578cc058d9SJed Brown PETSC_EXTERN PetscErrorCode PCCreate_BDDC(PC pc)
2658da1bb401SStefano Zampini {
2659da1bb401SStefano Zampini   PetscErrorCode      ierr;
2660da1bb401SStefano Zampini   PC_BDDC             *pcbddc;
2661da1bb401SStefano Zampini 
2662da1bb401SStefano Zampini   PetscFunctionBegin;
2663b00a9115SJed Brown   ierr     = PetscNewLog(pc,&pcbddc);CHKERRQ(ierr);
2664da1bb401SStefano Zampini   pc->data = (void*)pcbddc;
2665da1bb401SStefano Zampini 
2666da1bb401SStefano Zampini   /* create PCIS data structure */
2667da1bb401SStefano Zampini   ierr = PCISCreate(pc);CHKERRQ(ierr);
2668da1bb401SStefano Zampini 
26699326c5c6Sstefano_zampini   /* create local graph structure */
26709326c5c6Sstefano_zampini   ierr = PCBDDCGraphCreate(&pcbddc->mat_graph);CHKERRQ(ierr);
26719326c5c6Sstefano_zampini 
26729326c5c6Sstefano_zampini   /* BDDC nonzero defaults */
267308a5cf49SStefano Zampini   pcbddc->use_local_adj             = PETSC_TRUE;
267447d04d0dSStefano Zampini   pcbddc->use_vertices              = PETSC_TRUE;
267547d04d0dSStefano Zampini   pcbddc->use_edges                 = PETSC_TRUE;
26763301b35fSStefano Zampini   pcbddc->symmetric_primal          = PETSC_TRUE;
267714f95afaSStefano Zampini   pcbddc->vertex_size               = 1;
2678c703fcc7SStefano Zampini   pcbddc->recompute_topography      = PETSC_TRUE;
267968457ee5SStefano Zampini   pcbddc->coarse_size               = -1;
268085c4d303SStefano Zampini   pcbddc->use_exact_dirichlet_trick = PETSC_TRUE;
268147d04d0dSStefano Zampini   pcbddc->coarsening_ratio          = 8;
268257de7509SStefano Zampini   pcbddc->coarse_eqs_per_proc       = 1;
268327b6a85dSStefano Zampini   pcbddc->benign_compute_correction = PETSC_TRUE;
26841e0482f5SStefano Zampini   pcbddc->nedfield                  = -1;
26851e0482f5SStefano Zampini   pcbddc->nedglobal                 = PETSC_TRUE;
2686be12c134Sstefano_zampini   pcbddc->graphmaxcount             = PETSC_MAX_INT;
2687b96c3477SStefano Zampini   pcbddc->sub_schurs_layers         = -1;
2688b7eb3628SStefano Zampini 
2689da1bb401SStefano Zampini   /* function pointers */
2690da1bb401SStefano Zampini   pc->ops->apply               = PCApply_BDDC;
269193bd9ae7SStefano Zampini   pc->ops->applytranspose      = PCApplyTranspose_BDDC;
2692da1bb401SStefano Zampini   pc->ops->setup               = PCSetUp_BDDC;
2693da1bb401SStefano Zampini   pc->ops->destroy             = PCDestroy_BDDC;
2694da1bb401SStefano Zampini   pc->ops->setfromoptions      = PCSetFromOptions_BDDC;
26956b78500eSPatrick Sanan   pc->ops->view                = PCView_BDDC;
2696da1bb401SStefano Zampini   pc->ops->applyrichardson     = 0;
2697da1bb401SStefano Zampini   pc->ops->applysymmetricleft  = 0;
2698da1bb401SStefano Zampini   pc->ops->applysymmetricright = 0;
2699534831adSStefano Zampini   pc->ops->presolve            = PCPreSolve_BDDC;
2700534831adSStefano Zampini   pc->ops->postsolve           = PCPostSolve_BDDC;
27019326c5c6Sstefano_zampini   pc->ops->reset               = PCReset_BDDC;
2702da1bb401SStefano Zampini 
2703da1bb401SStefano Zampini   /* composing function */
2704a13144ffSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDiscreteGradient_C",PCBDDCSetDiscreteGradient_BDDC);CHKERRQ(ierr);
2705a198735bSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDivergenceMat_C",PCBDDCSetDivergenceMat_BDDC);CHKERRQ(ierr);
2706906d46d4SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetChangeOfBasisMat_C",PCBDDCSetChangeOfBasisMat_BDDC);CHKERRQ(ierr);
2707674ae819SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetPrimalVerticesLocalIS_C",PCBDDCSetPrimalVerticesLocalIS_BDDC);CHKERRQ(ierr);
270830368db7SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetPrimalVerticesIS_C",PCBDDCSetPrimalVerticesIS_BDDC);CHKERRQ(ierr);
2709bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetCoarseningRatio_C",PCBDDCSetCoarseningRatio_BDDC);CHKERRQ(ierr);
27102b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevel_C",PCBDDCSetLevel_BDDC);CHKERRQ(ierr);
2711b8ffe317SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetUseExactDirichlet_C",PCBDDCSetUseExactDirichlet_BDDC);CHKERRQ(ierr);
27122b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevels_C",PCBDDCSetLevels_BDDC);CHKERRQ(ierr);
2713bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundaries_C",PCBDDCSetDirichletBoundaries_BDDC);CHKERRQ(ierr);
271482ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundariesLocal_C",PCBDDCSetDirichletBoundariesLocal_BDDC);CHKERRQ(ierr);
2715bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundaries_C",PCBDDCSetNeumannBoundaries_BDDC);CHKERRQ(ierr);
271682ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundariesLocal_C",PCBDDCSetNeumannBoundariesLocal_BDDC);CHKERRQ(ierr);
2717bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundaries_C",PCBDDCGetDirichletBoundaries_BDDC);CHKERRQ(ierr);
271882ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundariesLocal_C",PCBDDCGetDirichletBoundariesLocal_BDDC);CHKERRQ(ierr);
2719bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundaries_C",PCBDDCGetNeumannBoundaries_BDDC);CHKERRQ(ierr);
272082ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundariesLocal_C",PCBDDCGetNeumannBoundariesLocal_BDDC);CHKERRQ(ierr);
2721bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplitting_C",PCBDDCSetDofsSplitting_BDDC);CHKERRQ(ierr);
272263602bcaSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplittingLocal_C",PCBDDCSetDofsSplittingLocal_BDDC);CHKERRQ(ierr);
2723bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",PCBDDCSetLocalAdjacencyGraph_BDDC);CHKERRQ(ierr);
2724bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCCreateFETIDPOperators_C",PCBDDCCreateFETIDPOperators_BDDC);CHKERRQ(ierr);
2725bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetRHS_C",PCBDDCMatFETIDPGetRHS_BDDC);CHKERRQ(ierr);
2726bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetSolution_C",PCBDDCMatFETIDPGetSolution_BDDC);CHKERRQ(ierr);
2727a06fd7f2SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCPreSolveChangeRHS_C",PCPreSolveChangeRHS_BDDC);CHKERRQ(ierr);
2728da1bb401SStefano Zampini   PetscFunctionReturn(0);
2729da1bb401SStefano Zampini }
27303425bc38SStefano Zampini 
2731