xref: /petsc/src/ksp/pc/impls/bddc/bddc.c (revision b0147a47fa17a5d34ad60e79bd3cacb7ab02f2ab)
153cdbc3dSStefano Zampini /* TODOLIST
2eb97c9d2SStefano Zampini 
3eb97c9d2SStefano Zampini    ConstraintsSetup
4eb97c9d2SStefano Zampini    - tolerances for constraints as an option (take care of single precision!)
5c1c8e736SStefano Zampini    - Can MAT_IGNORE_ZERO_ENTRIES be used for Constraints Matrix?
6eb97c9d2SStefano Zampini 
7eb97c9d2SStefano Zampini    Solvers
8eb97c9d2SStefano Zampini    - Add support for reuse fill and cholecky factor for coarse solver (similar to local solvers)
9eb97c9d2SStefano Zampini    - Propagate ksp prefixes for solvers to mat objects?
10eb97c9d2SStefano Zampini    - Propagate nearnullspace info among levels
11eb97c9d2SStefano Zampini 
12eb97c9d2SStefano Zampini    User interface
13eb97c9d2SStefano Zampini    - Negative indices in dirichlet and Neumann is should be skipped (now they cause out-of-bounds access)
14eb97c9d2SStefano Zampini    - DofSplitting and DM attached to pc?
15eb97c9d2SStefano Zampini 
16eb97c9d2SStefano Zampini    Debugging output
17eb97c9d2SStefano Zampini    - Better management of verbosity levels of debugging output
18eb97c9d2SStefano Zampini 
19eb97c9d2SStefano Zampini    Build
20eb97c9d2SStefano Zampini    - make runexe59
21eb97c9d2SStefano Zampini 
22eb97c9d2SStefano Zampini    Extra
23eb97c9d2SStefano Zampini    - Is it possible to work with PCBDDCGraph on boundary indices only (less memory consumed)?
24eb97c9d2SStefano Zampini    - Why options for "pc_bddc_coarse" solver gets propagated to "pc_bddc_coarse_1" solver?
25eb97c9d2SStefano Zampini    - add support for computing h,H and related using coordinates?
26c0b83709SStefano Zampini    - Change of basis approach does not work with my nonlinear mechanics example. why? (seems not an issue with l2gmap)
27eb97c9d2SStefano Zampini    - Better management in PCIS code
28eb97c9d2SStefano Zampini    - BDDC with MG framework?
29eb97c9d2SStefano Zampini 
30eb97c9d2SStefano Zampini    FETIDP
31eb97c9d2SStefano Zampini    - Move FETIDP code to its own classes
32eb97c9d2SStefano Zampini 
33eb97c9d2SStefano Zampini    MATIS related operations contained in BDDC code
34eb97c9d2SStefano Zampini    - Provide general case for subassembling
3539e2fb2aSStefano Zampini    - Preallocation routines in MatISGetMPIAXAIJ
36eb97c9d2SStefano Zampini 
3753cdbc3dSStefano Zampini */
380c7d97c5SJed Brown 
3953cdbc3dSStefano Zampini /* ----------------------------------------------------------------------------------------------------------------------------------------------
400c7d97c5SJed Brown    Implementation of BDDC preconditioner based on:
410c7d97c5SJed Brown    C. Dohrmann "An approximate BDDC preconditioner", Numerical Linear Algebra with Applications Volume 14, Issue 2, pages 149-168, March 2007
4253cdbc3dSStefano Zampini    ---------------------------------------------------------------------------------------------------------------------------------------------- */
4353cdbc3dSStefano Zampini 
44674ae819SStefano Zampini #include "bddc.h" /*I "petscpc.h" I*/  /* includes for fortran wrappers */
45674ae819SStefano Zampini #include "bddcprivate.h"
463b03a366Sstefano_zampini #include <petscblaslapack.h>
47674ae819SStefano Zampini 
480c7d97c5SJed Brown /* -------------------------------------------------------------------------- */
490c7d97c5SJed Brown #undef __FUNCT__
500c7d97c5SJed Brown #define __FUNCT__ "PCSetFromOptions_BDDC"
510c7d97c5SJed Brown PetscErrorCode PCSetFromOptions_BDDC(PC pc)
520c7d97c5SJed Brown {
530c7d97c5SJed Brown   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
540c7d97c5SJed Brown   PetscErrorCode ierr;
550c7d97c5SJed Brown 
560c7d97c5SJed Brown   PetscFunctionBegin;
570c7d97c5SJed Brown   ierr = PetscOptionsHead("BDDC options");CHKERRQ(ierr);
588eeda7d8SStefano Zampini   /* Verbose debugging */
598eeda7d8SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_check_level","Verbose output for PCBDDC (intended for debug)","none",pcbddc->dbg_flag,&pcbddc->dbg_flag,NULL);CHKERRQ(ierr);
608eeda7d8SStefano Zampini   /* Primal space cumstomization */
618eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_vertices","Use or not corner dofs in coarse space","none",pcbddc->use_vertices,&pcbddc->use_vertices,NULL);CHKERRQ(ierr);
628eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_edges","Use or not edge constraints in coarse space","none",pcbddc->use_edges,&pcbddc->use_edges,NULL);CHKERRQ(ierr);
638eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_faces","Use or not face constraints in coarse space","none",pcbddc->use_faces,&pcbddc->use_faces,NULL);CHKERRQ(ierr);
648eeda7d8SStefano Zampini   /* Change of basis */
658eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_change_of_basis","Use or not change of basis on local edge nodes","none",pcbddc->use_change_of_basis,&pcbddc->use_change_of_basis,NULL);CHKERRQ(ierr);
668eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_change_on_faces","Use or not change of basis on local face nodes","none",pcbddc->use_change_on_faces,&pcbddc->use_change_on_faces,NULL);CHKERRQ(ierr);
67674ae819SStefano Zampini   if (!pcbddc->use_change_of_basis) {
68674ae819SStefano Zampini     pcbddc->use_change_on_faces = PETSC_FALSE;
69674ae819SStefano Zampini   }
708eeda7d8SStefano Zampini   /* Switch between M_2 (default) and M_3 preconditioners (as defined by C. Dohrmann in the ref. article) */
718eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_switch_static","Switch on static condensation ops around the interface preconditioner","none",pcbddc->switch_static,&pcbddc->switch_static,NULL);CHKERRQ(ierr);
720298fd71SBarry Smith   ierr = PetscOptionsInt("-pc_bddc_coarsening_ratio","Set coarsening ratio used in multilevel coarsening","none",pcbddc->coarsening_ratio,&pcbddc->coarsening_ratio,NULL);CHKERRQ(ierr);
732b510759SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_levels","Set maximum number of levels for multilevel","none",pcbddc->max_levels,&pcbddc->max_levels,NULL);CHKERRQ(ierr);
74674ae819SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_deluxe_scaling","Use deluxe scaling for BDDC","none",pcbddc->use_deluxe_scaling,&pcbddc->use_deluxe_scaling,NULL);CHKERRQ(ierr);
750c7d97c5SJed Brown   ierr = PetscOptionsTail();CHKERRQ(ierr);
760c7d97c5SJed Brown   PetscFunctionReturn(0);
770c7d97c5SJed Brown }
780c7d97c5SJed Brown /* -------------------------------------------------------------------------- */
79674ae819SStefano Zampini #undef __FUNCT__
80674ae819SStefano Zampini #define __FUNCT__ "PCBDDCSetPrimalVerticesLocalIS_BDDC"
81674ae819SStefano Zampini static PetscErrorCode PCBDDCSetPrimalVerticesLocalIS_BDDC(PC pc, IS PrimalVertices)
82674ae819SStefano Zampini {
83674ae819SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
84674ae819SStefano Zampini   PetscErrorCode ierr;
851e6b0712SBarry Smith 
86674ae819SStefano Zampini   PetscFunctionBegin;
87674ae819SStefano Zampini   ierr = ISDestroy(&pcbddc->user_primal_vertices);CHKERRQ(ierr);
88674ae819SStefano Zampini   ierr = PetscObjectReference((PetscObject)PrimalVertices);CHKERRQ(ierr);
89674ae819SStefano Zampini   pcbddc->user_primal_vertices = PrimalVertices;
90674ae819SStefano Zampini   PetscFunctionReturn(0);
91674ae819SStefano Zampini }
92674ae819SStefano Zampini #undef __FUNCT__
93674ae819SStefano Zampini #define __FUNCT__ "PCBDDCSetPrimalVerticesLocalIS"
94674ae819SStefano Zampini /*@
9528509bceSStefano Zampini  PCBDDCSetPrimalVerticesLocalIS - Set additional user defined primal vertices in PCBDDC
96674ae819SStefano Zampini 
97674ae819SStefano Zampini    Not collective
98674ae819SStefano Zampini 
99674ae819SStefano Zampini    Input Parameters:
100674ae819SStefano Zampini +  pc - the preconditioning context
10128509bceSStefano Zampini -  PrimalVertices - index set of primal vertices in local numbering
102674ae819SStefano Zampini 
103674ae819SStefano Zampini    Level: intermediate
104674ae819SStefano Zampini 
105674ae819SStefano Zampini    Notes:
106674ae819SStefano Zampini 
107674ae819SStefano Zampini .seealso: PCBDDC
108674ae819SStefano Zampini @*/
109674ae819SStefano Zampini PetscErrorCode PCBDDCSetPrimalVerticesLocalIS(PC pc, IS PrimalVertices)
110674ae819SStefano Zampini {
111674ae819SStefano Zampini   PetscErrorCode ierr;
112674ae819SStefano Zampini 
113674ae819SStefano Zampini   PetscFunctionBegin;
114674ae819SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
115674ae819SStefano Zampini   PetscValidHeaderSpecific(PrimalVertices,IS_CLASSID,2);
116674ae819SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetPrimalVerticesLocalIS_C",(PC,IS),(pc,PrimalVertices));CHKERRQ(ierr);
117674ae819SStefano Zampini   PetscFunctionReturn(0);
118674ae819SStefano Zampini }
119674ae819SStefano Zampini /* -------------------------------------------------------------------------- */
1200c7d97c5SJed Brown #undef __FUNCT__
1214fad6a16SStefano Zampini #define __FUNCT__ "PCBDDCSetCoarseningRatio_BDDC"
1224fad6a16SStefano Zampini static PetscErrorCode PCBDDCSetCoarseningRatio_BDDC(PC pc,PetscInt k)
1234fad6a16SStefano Zampini {
1244fad6a16SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
1254fad6a16SStefano Zampini 
1264fad6a16SStefano Zampini   PetscFunctionBegin;
1274fad6a16SStefano Zampini   pcbddc->coarsening_ratio = k;
1284fad6a16SStefano Zampini   PetscFunctionReturn(0);
1294fad6a16SStefano Zampini }
1301e6b0712SBarry Smith 
1314fad6a16SStefano Zampini #undef __FUNCT__
1324fad6a16SStefano Zampini #define __FUNCT__ "PCBDDCSetCoarseningRatio"
1334fad6a16SStefano Zampini /*@
13428509bceSStefano Zampini  PCBDDCSetCoarseningRatio - Set coarsening ratio used in multilevel
1354fad6a16SStefano Zampini 
1364fad6a16SStefano Zampini    Logically collective on PC
1374fad6a16SStefano Zampini 
1384fad6a16SStefano Zampini    Input Parameters:
1394fad6a16SStefano Zampini +  pc - the preconditioning context
14028509bceSStefano Zampini -  k - coarsening ratio (H/h at the coarser level)
1414fad6a16SStefano Zampini 
14228509bceSStefano Zampini    Approximatively k subdomains at the finer level will be aggregated into a single subdomain at the coarser level
1434fad6a16SStefano Zampini 
1444fad6a16SStefano Zampini    Level: intermediate
1454fad6a16SStefano Zampini 
1464fad6a16SStefano Zampini    Notes:
1474fad6a16SStefano Zampini 
1484fad6a16SStefano Zampini .seealso: PCBDDC
1494fad6a16SStefano Zampini @*/
1504fad6a16SStefano Zampini PetscErrorCode PCBDDCSetCoarseningRatio(PC pc,PetscInt k)
1514fad6a16SStefano Zampini {
1524fad6a16SStefano Zampini   PetscErrorCode ierr;
1534fad6a16SStefano Zampini 
1544fad6a16SStefano Zampini   PetscFunctionBegin;
1554fad6a16SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
1562b510759SStefano Zampini   PetscValidLogicalCollectiveInt(pc,k,2);
1574fad6a16SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetCoarseningRatio_C",(PC,PetscInt),(pc,k));CHKERRQ(ierr);
1584fad6a16SStefano Zampini   PetscFunctionReturn(0);
1594fad6a16SStefano Zampini }
1602b510759SStefano Zampini 
161b8ffe317SStefano Zampini /* The following functions (PCBDDCSetUseExactDirichlet PCBDDCSetLevel) are not public */
1622b510759SStefano Zampini #undef __FUNCT__
163b8ffe317SStefano Zampini #define __FUNCT__ "PCBDDCSetUseExactDirichlet_BDDC"
164b8ffe317SStefano Zampini static PetscErrorCode PCBDDCSetUseExactDirichlet_BDDC(PC pc,PetscBool flg)
165b8ffe317SStefano Zampini {
166b8ffe317SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
167b8ffe317SStefano Zampini 
168b8ffe317SStefano Zampini   PetscFunctionBegin;
16985c4d303SStefano Zampini   pcbddc->use_exact_dirichlet_trick = flg;
170b8ffe317SStefano Zampini   PetscFunctionReturn(0);
171b8ffe317SStefano Zampini }
172b8ffe317SStefano Zampini 
173b8ffe317SStefano Zampini #undef __FUNCT__
174b8ffe317SStefano Zampini #define __FUNCT__ "PCBDDCSetUseExactDirichlet"
175b8ffe317SStefano Zampini PetscErrorCode PCBDDCSetUseExactDirichlet(PC pc,PetscBool flg)
1762b510759SStefano Zampini {
1772b510759SStefano Zampini   PetscErrorCode ierr;
1782b510759SStefano Zampini 
1792b510759SStefano Zampini   PetscFunctionBegin;
1802b510759SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
181b8ffe317SStefano Zampini   PetscValidLogicalCollectiveBool(pc,flg,2);
182b8ffe317SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetUseExactDirichlet_C",(PC,PetscBool),(pc,flg));CHKERRQ(ierr);
1832b510759SStefano Zampini   PetscFunctionReturn(0);
1842b510759SStefano Zampini }
1851e6b0712SBarry Smith 
1864fad6a16SStefano Zampini #undef __FUNCT__
1872b510759SStefano Zampini #define __FUNCT__ "PCBDDCSetLevel_BDDC"
1882b510759SStefano Zampini static PetscErrorCode PCBDDCSetLevel_BDDC(PC pc,PetscInt level)
1894fad6a16SStefano Zampini {
1904fad6a16SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
1914fad6a16SStefano Zampini 
1924fad6a16SStefano Zampini   PetscFunctionBegin;
1932b510759SStefano Zampini   pcbddc->current_level = level;
1944fad6a16SStefano Zampini   PetscFunctionReturn(0);
1954fad6a16SStefano Zampini }
1961e6b0712SBarry Smith 
1974fad6a16SStefano Zampini #undef __FUNCT__
198b8ffe317SStefano Zampini #define __FUNCT__ "PCBDDCSetLevel"
199b8ffe317SStefano Zampini PetscErrorCode PCBDDCSetLevel(PC pc,PetscInt level)
200b8ffe317SStefano Zampini {
201b8ffe317SStefano Zampini   PetscErrorCode ierr;
202b8ffe317SStefano Zampini 
203b8ffe317SStefano Zampini   PetscFunctionBegin;
204b8ffe317SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
205b8ffe317SStefano Zampini   PetscValidLogicalCollectiveInt(pc,level,2);
206b8ffe317SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetLevel_C",(PC,PetscInt),(pc,level));CHKERRQ(ierr);
207b8ffe317SStefano Zampini   PetscFunctionReturn(0);
208b8ffe317SStefano Zampini }
209b8ffe317SStefano Zampini 
210b8ffe317SStefano Zampini #undef __FUNCT__
2112b510759SStefano Zampini #define __FUNCT__ "PCBDDCSetLevels_BDDC"
2122b510759SStefano Zampini static PetscErrorCode PCBDDCSetLevels_BDDC(PC pc,PetscInt levels)
2132b510759SStefano Zampini {
2142b510759SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
2152b510759SStefano Zampini 
2162b510759SStefano Zampini   PetscFunctionBegin;
2172b510759SStefano Zampini   pcbddc->max_levels = levels;
2182b510759SStefano Zampini   PetscFunctionReturn(0);
2192b510759SStefano Zampini }
2202b510759SStefano Zampini 
2212b510759SStefano Zampini #undef __FUNCT__
2222b510759SStefano Zampini #define __FUNCT__ "PCBDDCSetLevels"
2234fad6a16SStefano Zampini /*@
22428509bceSStefano Zampini  PCBDDCSetLevels - Sets the maximum number of levels for multilevel
2254fad6a16SStefano Zampini 
2264fad6a16SStefano Zampini    Logically collective on PC
2274fad6a16SStefano Zampini 
2284fad6a16SStefano Zampini    Input Parameters:
2294fad6a16SStefano Zampini +  pc - the preconditioning context
23028509bceSStefano Zampini -  levels - the maximum number of levels (max 9)
2314fad6a16SStefano Zampini 
23228509bceSStefano Zampini    Default value is 0, i.e. traditional one-level BDDC
2334fad6a16SStefano Zampini 
2344fad6a16SStefano Zampini    Level: intermediate
2354fad6a16SStefano Zampini 
2364fad6a16SStefano Zampini    Notes:
2374fad6a16SStefano Zampini 
2384fad6a16SStefano Zampini .seealso: PCBDDC
2394fad6a16SStefano Zampini @*/
2402b510759SStefano Zampini PetscErrorCode PCBDDCSetLevels(PC pc,PetscInt levels)
2414fad6a16SStefano Zampini {
2424fad6a16SStefano Zampini   PetscErrorCode ierr;
2434fad6a16SStefano Zampini 
2444fad6a16SStefano Zampini   PetscFunctionBegin;
2454fad6a16SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
2462b510759SStefano Zampini   PetscValidLogicalCollectiveInt(pc,levels,2);
2472b510759SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetLevels_C",(PC,PetscInt),(pc,levels));CHKERRQ(ierr);
2484fad6a16SStefano Zampini   PetscFunctionReturn(0);
2494fad6a16SStefano Zampini }
2504fad6a16SStefano Zampini /* -------------------------------------------------------------------------- */
2511e6b0712SBarry Smith 
2524fad6a16SStefano Zampini #undef __FUNCT__
2530bdf917eSStefano Zampini #define __FUNCT__ "PCBDDCSetNullSpace_BDDC"
2540bdf917eSStefano Zampini static PetscErrorCode PCBDDCSetNullSpace_BDDC(PC pc,MatNullSpace NullSpace)
2550bdf917eSStefano Zampini {
2560bdf917eSStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
2570bdf917eSStefano Zampini   PetscErrorCode ierr;
2580bdf917eSStefano Zampini 
2590bdf917eSStefano Zampini   PetscFunctionBegin;
2600bdf917eSStefano Zampini   ierr = PetscObjectReference((PetscObject)NullSpace);CHKERRQ(ierr);
2610bdf917eSStefano Zampini   ierr = MatNullSpaceDestroy(&pcbddc->NullSpace);CHKERRQ(ierr);
2620bdf917eSStefano Zampini   pcbddc->NullSpace = NullSpace;
2630bdf917eSStefano Zampini   PetscFunctionReturn(0);
2640bdf917eSStefano Zampini }
2651e6b0712SBarry Smith 
2660bdf917eSStefano Zampini #undef __FUNCT__
2670bdf917eSStefano Zampini #define __FUNCT__ "PCBDDCSetNullSpace"
2680bdf917eSStefano Zampini /*@
26928509bceSStefano Zampini  PCBDDCSetNullSpace - Set nullspace for BDDC operator
2700bdf917eSStefano Zampini 
2710bdf917eSStefano Zampini    Logically collective on PC and MatNullSpace
2720bdf917eSStefano Zampini 
2730bdf917eSStefano Zampini    Input Parameters:
2740bdf917eSStefano Zampini +  pc - the preconditioning context
27528509bceSStefano Zampini -  NullSpace - Null space of the linear operator to be preconditioned (Pmat)
2760bdf917eSStefano Zampini 
2770bdf917eSStefano Zampini    Level: intermediate
2780bdf917eSStefano Zampini 
2790bdf917eSStefano Zampini    Notes:
2800bdf917eSStefano Zampini 
2810bdf917eSStefano Zampini .seealso: PCBDDC
2820bdf917eSStefano Zampini @*/
2830bdf917eSStefano Zampini PetscErrorCode PCBDDCSetNullSpace(PC pc,MatNullSpace NullSpace)
2840bdf917eSStefano Zampini {
2850bdf917eSStefano Zampini   PetscErrorCode ierr;
2860bdf917eSStefano Zampini 
2870bdf917eSStefano Zampini   PetscFunctionBegin;
2880bdf917eSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
289674ae819SStefano Zampini   PetscValidHeaderSpecific(NullSpace,MAT_NULLSPACE_CLASSID,2);
2902b510759SStefano Zampini   PetscCheckSameComm(pc,1,NullSpace,2);
2910bdf917eSStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetNullSpace_C",(PC,MatNullSpace),(pc,NullSpace));CHKERRQ(ierr);
2920bdf917eSStefano Zampini   PetscFunctionReturn(0);
2930bdf917eSStefano Zampini }
2940bdf917eSStefano Zampini /* -------------------------------------------------------------------------- */
2951e6b0712SBarry Smith 
2960bdf917eSStefano Zampini #undef __FUNCT__
2973b03a366Sstefano_zampini #define __FUNCT__ "PCBDDCSetDirichletBoundaries_BDDC"
2983b03a366Sstefano_zampini static PetscErrorCode PCBDDCSetDirichletBoundaries_BDDC(PC pc,IS DirichletBoundaries)
2993b03a366Sstefano_zampini {
3003b03a366Sstefano_zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
3013b03a366Sstefano_zampini   PetscErrorCode ierr;
3023b03a366Sstefano_zampini 
3033b03a366Sstefano_zampini   PetscFunctionBegin;
304785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
305785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->DirichletBoundariesLocal);CHKERRQ(ierr);
3063b03a366Sstefano_zampini   ierr = ISDestroy(&pcbddc->DirichletBoundaries);CHKERRQ(ierr);
30736e030ebSStefano Zampini   ierr = PetscObjectReference((PetscObject)DirichletBoundaries);CHKERRQ(ierr);
30836e030ebSStefano Zampini   pcbddc->DirichletBoundaries = DirichletBoundaries;
309fb180af4SStefano Zampini   pcbddc->recompute_topography = PETSC_TRUE;
3103b03a366Sstefano_zampini   PetscFunctionReturn(0);
3113b03a366Sstefano_zampini }
3121e6b0712SBarry Smith 
3133b03a366Sstefano_zampini #undef __FUNCT__
3143b03a366Sstefano_zampini #define __FUNCT__ "PCBDDCSetDirichletBoundaries"
3153b03a366Sstefano_zampini /*@
31628509bceSStefano Zampini  PCBDDCSetDirichletBoundaries - Set IS defining Dirichlet boundaries for the global problem.
3173b03a366Sstefano_zampini 
318785d1243SStefano Zampini    Collective
3193b03a366Sstefano_zampini 
3203b03a366Sstefano_zampini    Input Parameters:
3213b03a366Sstefano_zampini +  pc - the preconditioning context
322785d1243SStefano Zampini -  DirichletBoundaries - parallel IS defining the Dirichlet boundaries
3233b03a366Sstefano_zampini 
3243b03a366Sstefano_zampini    Level: intermediate
3253b03a366Sstefano_zampini 
326785d1243SStefano Zampini    Notes: Any process can list any global node
3273b03a366Sstefano_zampini 
3283b03a366Sstefano_zampini .seealso: PCBDDC
3293b03a366Sstefano_zampini @*/
3303b03a366Sstefano_zampini PetscErrorCode PCBDDCSetDirichletBoundaries(PC pc,IS DirichletBoundaries)
3313b03a366Sstefano_zampini {
3323b03a366Sstefano_zampini   PetscErrorCode ierr;
3333b03a366Sstefano_zampini 
3343b03a366Sstefano_zampini   PetscFunctionBegin;
3353b03a366Sstefano_zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
336674ae819SStefano Zampini   PetscValidHeaderSpecific(DirichletBoundaries,IS_CLASSID,2);
337785d1243SStefano Zampini   PetscCheckSameComm(pc,1,DirichletBoundaries,2);
3383b03a366Sstefano_zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDirichletBoundaries_C",(PC,IS),(pc,DirichletBoundaries));CHKERRQ(ierr);
3393b03a366Sstefano_zampini   PetscFunctionReturn(0);
3403b03a366Sstefano_zampini }
3413b03a366Sstefano_zampini /* -------------------------------------------------------------------------- */
3421e6b0712SBarry Smith 
3433b03a366Sstefano_zampini #undef __FUNCT__
34482ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCSetDirichletBoundariesLocal_BDDC"
34582ba6b80SStefano Zampini static PetscErrorCode PCBDDCSetDirichletBoundariesLocal_BDDC(PC pc,IS DirichletBoundaries)
3460c7d97c5SJed Brown {
3470c7d97c5SJed Brown   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
3480c7d97c5SJed Brown   PetscErrorCode ierr;
3490c7d97c5SJed Brown 
3500c7d97c5SJed Brown   PetscFunctionBegin;
351785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
352785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->DirichletBoundariesLocal);CHKERRQ(ierr);
3530c7d97c5SJed Brown   ierr = ISDestroy(&pcbddc->DirichletBoundaries);CHKERRQ(ierr);
3540c7d97c5SJed Brown   ierr = PetscObjectReference((PetscObject)DirichletBoundaries);CHKERRQ(ierr);
355785d1243SStefano Zampini   pcbddc->DirichletBoundariesLocal = DirichletBoundaries;
3567d24d155SStefano Zampini   pcbddc->recompute_topography = PETSC_TRUE;
3570c7d97c5SJed Brown   PetscFunctionReturn(0);
3580c7d97c5SJed Brown }
3590c7d97c5SJed Brown 
3600c7d97c5SJed Brown #undef __FUNCT__
36182ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCSetDirichletBoundariesLocal"
3629c0446d6SStefano Zampini /*@
36382ba6b80SStefano Zampini  PCBDDCSetDirichletBoundariesLocal - Set IS defining Dirichlet boundaries for the global problem in local ordering.
3649c0446d6SStefano Zampini 
365785d1243SStefano Zampini    Collective
36653cdbc3dSStefano Zampini 
36753cdbc3dSStefano Zampini    Input Parameters:
36853cdbc3dSStefano Zampini +  pc - the preconditioning context
36982ba6b80SStefano Zampini -  DirichletBoundaries - parallel IS defining the Dirichlet boundaries (in local ordering)
37053cdbc3dSStefano Zampini 
37153cdbc3dSStefano Zampini    Level: intermediate
37253cdbc3dSStefano Zampini 
3739c0446d6SStefano Zampini    Notes:
37453cdbc3dSStefano Zampini 
37553cdbc3dSStefano Zampini .seealso: PCBDDC
37653cdbc3dSStefano Zampini @*/
37782ba6b80SStefano Zampini PetscErrorCode PCBDDCSetDirichletBoundariesLocal(PC pc,IS DirichletBoundaries)
3780c7d97c5SJed Brown {
3790c7d97c5SJed Brown   PetscErrorCode ierr;
3800c7d97c5SJed Brown 
3810c7d97c5SJed Brown   PetscFunctionBegin;
3820c7d97c5SJed Brown   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
3830c7d97c5SJed Brown   PetscValidHeaderSpecific(DirichletBoundaries,IS_CLASSID,2);
38482ba6b80SStefano Zampini   PetscCheckSameComm(pc,1,DirichletBoundaries,2);
38582ba6b80SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDirichletBoundariesLocal_C",(PC,IS),(pc,DirichletBoundaries));CHKERRQ(ierr);
3860c7d97c5SJed Brown   PetscFunctionReturn(0);
3870c7d97c5SJed Brown }
3880c7d97c5SJed Brown /* -------------------------------------------------------------------------- */
3890c7d97c5SJed Brown 
3900c7d97c5SJed Brown #undef __FUNCT__
3910c7d97c5SJed Brown #define __FUNCT__ "PCBDDCSetNeumannBoundaries_BDDC"
39253cdbc3dSStefano Zampini static PetscErrorCode PCBDDCSetNeumannBoundaries_BDDC(PC pc,IS NeumannBoundaries)
3930c7d97c5SJed Brown {
3940c7d97c5SJed Brown   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
39553cdbc3dSStefano Zampini   PetscErrorCode ierr;
3960c7d97c5SJed Brown 
3970c7d97c5SJed Brown   PetscFunctionBegin;
398785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
399785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->NeumannBoundariesLocal);CHKERRQ(ierr);
40053cdbc3dSStefano Zampini   ierr = ISDestroy(&pcbddc->NeumannBoundaries);CHKERRQ(ierr);
40136e030ebSStefano Zampini   ierr = PetscObjectReference((PetscObject)NeumannBoundaries);CHKERRQ(ierr);
40236e030ebSStefano Zampini   pcbddc->NeumannBoundaries = NeumannBoundaries;
403fb180af4SStefano Zampini   pcbddc->recompute_topography = PETSC_TRUE;
4040c7d97c5SJed Brown   PetscFunctionReturn(0);
4050c7d97c5SJed Brown }
4061e6b0712SBarry Smith 
4070c7d97c5SJed Brown #undef __FUNCT__
4080c7d97c5SJed Brown #define __FUNCT__ "PCBDDCSetNeumannBoundaries"
40957527edcSJed Brown /*@
41028509bceSStefano Zampini  PCBDDCSetNeumannBoundaries - Set IS defining Neumann boundaries for the global problem.
41157527edcSJed Brown 
412785d1243SStefano Zampini    Collective
41357527edcSJed Brown 
41457527edcSJed Brown    Input Parameters:
41557527edcSJed Brown +  pc - the preconditioning context
416785d1243SStefano Zampini -  NeumannBoundaries - parallel IS defining the Neumann boundaries
41757527edcSJed Brown 
41857527edcSJed Brown    Level: intermediate
41957527edcSJed Brown 
420785d1243SStefano Zampini    Notes: Any process can list any global node
42157527edcSJed Brown 
42257527edcSJed Brown .seealso: PCBDDC
42357527edcSJed Brown @*/
42453cdbc3dSStefano Zampini PetscErrorCode PCBDDCSetNeumannBoundaries(PC pc,IS NeumannBoundaries)
4250c7d97c5SJed Brown {
4260c7d97c5SJed Brown   PetscErrorCode ierr;
4270c7d97c5SJed Brown 
4280c7d97c5SJed Brown   PetscFunctionBegin;
4290c7d97c5SJed Brown   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
430674ae819SStefano Zampini   PetscValidHeaderSpecific(NeumannBoundaries,IS_CLASSID,2);
431785d1243SStefano Zampini   PetscCheckSameComm(pc,1,NeumannBoundaries,2);
43253cdbc3dSStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetNeumannBoundaries_C",(PC,IS),(pc,NeumannBoundaries));CHKERRQ(ierr);
43353cdbc3dSStefano Zampini   PetscFunctionReturn(0);
43453cdbc3dSStefano Zampini }
43553cdbc3dSStefano Zampini /* -------------------------------------------------------------------------- */
4361e6b0712SBarry Smith 
43753cdbc3dSStefano Zampini #undef __FUNCT__
43882ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCSetNeumannBoundariesLocal_BDDC"
43982ba6b80SStefano Zampini static PetscErrorCode PCBDDCSetNeumannBoundariesLocal_BDDC(PC pc,IS NeumannBoundaries)
4400c7d97c5SJed Brown {
4410c7d97c5SJed Brown   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
4420c7d97c5SJed Brown   PetscErrorCode ierr;
4430c7d97c5SJed Brown 
4440c7d97c5SJed Brown   PetscFunctionBegin;
445785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
446785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->NeumannBoundariesLocal);CHKERRQ(ierr);
4470c7d97c5SJed Brown   ierr = ISDestroy(&pcbddc->NeumannBoundaries);CHKERRQ(ierr);
4480c7d97c5SJed Brown   ierr = PetscObjectReference((PetscObject)NeumannBoundaries);CHKERRQ(ierr);
449785d1243SStefano Zampini   pcbddc->NeumannBoundariesLocal = NeumannBoundaries;
4507d24d155SStefano Zampini   pcbddc->recompute_topography = PETSC_TRUE;
4510c7d97c5SJed Brown   PetscFunctionReturn(0);
4520c7d97c5SJed Brown }
4530c7d97c5SJed Brown 
4540c7d97c5SJed Brown #undef __FUNCT__
45582ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCSetNeumannBoundariesLocal"
4560c7d97c5SJed Brown /*@
45782ba6b80SStefano Zampini  PCBDDCSetNeumannBoundariesLocal - Set IS defining Neumann boundaries for the global problem in local ordering.
4580c7d97c5SJed Brown 
459785d1243SStefano Zampini    Collective
4600c7d97c5SJed Brown 
4610c7d97c5SJed Brown    Input Parameters:
4620c7d97c5SJed Brown +  pc - the preconditioning context
46382ba6b80SStefano Zampini -  NeumannBoundaries - parallel IS defining the subdomain part of Neumann boundaries (in local ordering)
4640c7d97c5SJed Brown 
4650c7d97c5SJed Brown    Level: intermediate
4660c7d97c5SJed Brown 
4670c7d97c5SJed Brown    Notes:
4680c7d97c5SJed Brown 
4690c7d97c5SJed Brown .seealso: PCBDDC
4700c7d97c5SJed Brown @*/
47182ba6b80SStefano Zampini PetscErrorCode PCBDDCSetNeumannBoundariesLocal(PC pc,IS NeumannBoundaries)
4720c7d97c5SJed Brown {
4730c7d97c5SJed Brown   PetscErrorCode ierr;
4740c7d97c5SJed Brown 
4750c7d97c5SJed Brown   PetscFunctionBegin;
4760c7d97c5SJed Brown   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
4770c7d97c5SJed Brown   PetscValidHeaderSpecific(NeumannBoundaries,IS_CLASSID,2);
47882ba6b80SStefano Zampini   PetscCheckSameComm(pc,1,NeumannBoundaries,2);
47982ba6b80SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetNeumannBoundariesLocal_C",(PC,IS),(pc,NeumannBoundaries));CHKERRQ(ierr);
48053cdbc3dSStefano Zampini   PetscFunctionReturn(0);
48153cdbc3dSStefano Zampini }
48253cdbc3dSStefano Zampini /* -------------------------------------------------------------------------- */
48353cdbc3dSStefano Zampini 
48453cdbc3dSStefano Zampini #undef __FUNCT__
485da1bb401SStefano Zampini #define __FUNCT__ "PCBDDCGetDirichletBoundaries_BDDC"
486da1bb401SStefano Zampini static PetscErrorCode PCBDDCGetDirichletBoundaries_BDDC(PC pc,IS *DirichletBoundaries)
487da1bb401SStefano Zampini {
488da1bb401SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
489da1bb401SStefano Zampini 
490da1bb401SStefano Zampini   PetscFunctionBegin;
491da1bb401SStefano Zampini   *DirichletBoundaries = pcbddc->DirichletBoundaries;
492da1bb401SStefano Zampini   PetscFunctionReturn(0);
493da1bb401SStefano Zampini }
4941e6b0712SBarry Smith 
495da1bb401SStefano Zampini #undef __FUNCT__
496da1bb401SStefano Zampini #define __FUNCT__ "PCBDDCGetDirichletBoundaries"
497da1bb401SStefano Zampini /*@
498785d1243SStefano Zampini  PCBDDCGetDirichletBoundaries - Get parallel IS for Dirichlet boundaries
499da1bb401SStefano Zampini 
500785d1243SStefano Zampini    Collective
501785d1243SStefano Zampini 
502785d1243SStefano Zampini    Input Parameters:
503785d1243SStefano Zampini .  pc - the preconditioning context
504785d1243SStefano Zampini 
505785d1243SStefano Zampini    Output Parameters:
506785d1243SStefano Zampini .  DirichletBoundaries - index set defining the Dirichlet boundaries
507785d1243SStefano Zampini 
508785d1243SStefano Zampini    Level: intermediate
509785d1243SStefano Zampini 
510785d1243SStefano Zampini    Notes: The IS returned (if any) is the same passed in earlier by the user with PCBDDCSetDirichletBoundaries
511785d1243SStefano Zampini 
512785d1243SStefano Zampini .seealso: PCBDDC
513785d1243SStefano Zampini @*/
514785d1243SStefano Zampini PetscErrorCode PCBDDCGetDirichletBoundaries(PC pc,IS *DirichletBoundaries)
515785d1243SStefano Zampini {
516785d1243SStefano Zampini   PetscErrorCode ierr;
517785d1243SStefano Zampini 
518785d1243SStefano Zampini   PetscFunctionBegin;
519785d1243SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
520785d1243SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetDirichletBoundaries_C",(PC,IS*),(pc,DirichletBoundaries));CHKERRQ(ierr);
521785d1243SStefano Zampini   PetscFunctionReturn(0);
522785d1243SStefano Zampini }
523785d1243SStefano Zampini /* -------------------------------------------------------------------------- */
524785d1243SStefano Zampini 
525785d1243SStefano Zampini #undef __FUNCT__
526785d1243SStefano Zampini #define __FUNCT__ "PCBDDCGetDirichletBoundariesLocal_BDDC"
527785d1243SStefano Zampini static PetscErrorCode PCBDDCGetDirichletBoundariesLocal_BDDC(PC pc,IS *DirichletBoundaries)
528785d1243SStefano Zampini {
529785d1243SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
530785d1243SStefano Zampini 
531785d1243SStefano Zampini   PetscFunctionBegin;
532785d1243SStefano Zampini   *DirichletBoundaries = pcbddc->DirichletBoundariesLocal;
533785d1243SStefano Zampini   PetscFunctionReturn(0);
534785d1243SStefano Zampini }
535785d1243SStefano Zampini 
536785d1243SStefano Zampini #undef __FUNCT__
53782ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCGetDirichletBoundariesLocal"
538da1bb401SStefano Zampini /*@
53982ba6b80SStefano Zampini  PCBDDCGetDirichletBoundariesLocal - Get parallel IS for Dirichlet boundaries (in local ordering)
540da1bb401SStefano Zampini 
541785d1243SStefano Zampini    Collective
542da1bb401SStefano Zampini 
543da1bb401SStefano Zampini    Input Parameters:
54428509bceSStefano Zampini .  pc - the preconditioning context
545da1bb401SStefano Zampini 
546da1bb401SStefano Zampini    Output Parameters:
54728509bceSStefano Zampini .  DirichletBoundaries - index set defining the subdomain part of Dirichlet boundaries
548da1bb401SStefano Zampini 
549da1bb401SStefano Zampini    Level: intermediate
550da1bb401SStefano Zampini 
551da1bb401SStefano Zampini    Notes:
552da1bb401SStefano Zampini 
553da1bb401SStefano Zampini .seealso: PCBDDC
554da1bb401SStefano Zampini @*/
55582ba6b80SStefano Zampini PetscErrorCode PCBDDCGetDirichletBoundariesLocal(PC pc,IS *DirichletBoundaries)
556da1bb401SStefano Zampini {
557da1bb401SStefano Zampini   PetscErrorCode ierr;
558da1bb401SStefano Zampini 
559da1bb401SStefano Zampini   PetscFunctionBegin;
560da1bb401SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
56182ba6b80SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetDirichletBoundariesLocal_C",(PC,IS*),(pc,DirichletBoundaries));CHKERRQ(ierr);
562da1bb401SStefano Zampini   PetscFunctionReturn(0);
563da1bb401SStefano Zampini }
564da1bb401SStefano Zampini /* -------------------------------------------------------------------------- */
5651e6b0712SBarry Smith 
566da1bb401SStefano Zampini #undef __FUNCT__
56753cdbc3dSStefano Zampini #define __FUNCT__ "PCBDDCGetNeumannBoundaries_BDDC"
56853cdbc3dSStefano Zampini static PetscErrorCode PCBDDCGetNeumannBoundaries_BDDC(PC pc,IS *NeumannBoundaries)
56953cdbc3dSStefano Zampini {
57053cdbc3dSStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
57153cdbc3dSStefano Zampini 
57253cdbc3dSStefano Zampini   PetscFunctionBegin;
57353cdbc3dSStefano Zampini   *NeumannBoundaries = pcbddc->NeumannBoundaries;
57453cdbc3dSStefano Zampini   PetscFunctionReturn(0);
57553cdbc3dSStefano Zampini }
5761e6b0712SBarry Smith 
57753cdbc3dSStefano Zampini #undef __FUNCT__
57853cdbc3dSStefano Zampini #define __FUNCT__ "PCBDDCGetNeumannBoundaries"
57953cdbc3dSStefano Zampini /*@
580785d1243SStefano Zampini  PCBDDCGetNeumannBoundaries - Get parallel IS for Neumann boundaries
58153cdbc3dSStefano Zampini 
582785d1243SStefano Zampini    Collective
583785d1243SStefano Zampini 
584785d1243SStefano Zampini    Input Parameters:
585785d1243SStefano Zampini .  pc - the preconditioning context
586785d1243SStefano Zampini 
587785d1243SStefano Zampini    Output Parameters:
588785d1243SStefano Zampini .  NeumannBoundaries - index set defining the Neumann boundaries
589785d1243SStefano Zampini 
590785d1243SStefano Zampini    Level: intermediate
591785d1243SStefano Zampini 
592785d1243SStefano Zampini    Notes: The IS returned (if any) is the same passed in earlier by the user with PCBDDCSetNeumannBoundaries
593785d1243SStefano Zampini 
594785d1243SStefano Zampini .seealso: PCBDDC
595785d1243SStefano Zampini @*/
596785d1243SStefano Zampini PetscErrorCode PCBDDCGetNeumannBoundaries(PC pc,IS *NeumannBoundaries)
597785d1243SStefano Zampini {
598785d1243SStefano Zampini   PetscErrorCode ierr;
599785d1243SStefano Zampini 
600785d1243SStefano Zampini   PetscFunctionBegin;
601785d1243SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
602785d1243SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetNeumannBoundaries_C",(PC,IS*),(pc,NeumannBoundaries));CHKERRQ(ierr);
603785d1243SStefano Zampini   PetscFunctionReturn(0);
604785d1243SStefano Zampini }
605785d1243SStefano Zampini /* -------------------------------------------------------------------------- */
606785d1243SStefano Zampini 
607785d1243SStefano Zampini #undef __FUNCT__
608785d1243SStefano Zampini #define __FUNCT__ "PCBDDCGetNeumannBoundariesLocal_BDDC"
609785d1243SStefano Zampini static PetscErrorCode PCBDDCGetNeumannBoundariesLocal_BDDC(PC pc,IS *NeumannBoundaries)
610785d1243SStefano Zampini {
611785d1243SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
612785d1243SStefano Zampini 
613785d1243SStefano Zampini   PetscFunctionBegin;
614785d1243SStefano Zampini   *NeumannBoundaries = pcbddc->NeumannBoundariesLocal;
615785d1243SStefano Zampini   PetscFunctionReturn(0);
616785d1243SStefano Zampini }
617785d1243SStefano Zampini 
618785d1243SStefano Zampini #undef __FUNCT__
61982ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCGetNeumannBoundariesLocal"
62053cdbc3dSStefano Zampini /*@
62182ba6b80SStefano Zampini  PCBDDCGetNeumannBoundariesLocal - Get parallel IS for Neumann boundaries (in local ordering)
62253cdbc3dSStefano Zampini 
623785d1243SStefano Zampini    Collective
62453cdbc3dSStefano Zampini 
62553cdbc3dSStefano Zampini    Input Parameters:
62628509bceSStefano Zampini .  pc - the preconditioning context
62753cdbc3dSStefano Zampini 
62853cdbc3dSStefano Zampini    Output Parameters:
62928509bceSStefano Zampini .  NeumannBoundaries - index set defining the subdomain part of Neumann boundaries
63053cdbc3dSStefano Zampini 
63153cdbc3dSStefano Zampini    Level: intermediate
63253cdbc3dSStefano Zampini 
63353cdbc3dSStefano Zampini    Notes:
63453cdbc3dSStefano Zampini 
63553cdbc3dSStefano Zampini .seealso: PCBDDC
63653cdbc3dSStefano Zampini @*/
63782ba6b80SStefano Zampini PetscErrorCode PCBDDCGetNeumannBoundariesLocal(PC pc,IS *NeumannBoundaries)
63853cdbc3dSStefano Zampini {
63953cdbc3dSStefano Zampini   PetscErrorCode ierr;
64053cdbc3dSStefano Zampini 
64153cdbc3dSStefano Zampini   PetscFunctionBegin;
64253cdbc3dSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
64382ba6b80SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetNeumannBoundariesLocal_C",(PC,IS*),(pc,NeumannBoundaries));CHKERRQ(ierr);
6440c7d97c5SJed Brown   PetscFunctionReturn(0);
6450c7d97c5SJed Brown }
64636e030ebSStefano Zampini /* -------------------------------------------------------------------------- */
6471e6b0712SBarry Smith 
64836e030ebSStefano Zampini #undef __FUNCT__
649da1bb401SStefano Zampini #define __FUNCT__ "PCBDDCSetLocalAdjacencyGraph_BDDC"
6501a83f524SJed Brown static PetscErrorCode PCBDDCSetLocalAdjacencyGraph_BDDC(PC pc, PetscInt nvtxs,const PetscInt xadj[],const PetscInt adjncy[], PetscCopyMode copymode)
65136e030ebSStefano Zampini {
65236e030ebSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
653da1bb401SStefano Zampini   PCBDDCGraph    mat_graph = pcbddc->mat_graph;
654da1bb401SStefano Zampini   PetscErrorCode ierr;
65536e030ebSStefano Zampini 
65636e030ebSStefano Zampini   PetscFunctionBegin;
657674ae819SStefano Zampini   /* free old CSR */
658674ae819SStefano Zampini   ierr = PCBDDCGraphResetCSR(mat_graph);CHKERRQ(ierr);
659fb223d50SStefano Zampini   /* TODO: PCBDDCGraphSetAdjacency */
660674ae819SStefano Zampini   /* get CSR into graph structure */
661da1bb401SStefano Zampini   if (copymode == PETSC_COPY_VALUES) {
662674ae819SStefano Zampini     ierr = PetscMalloc((nvtxs+1)*sizeof(PetscInt),&mat_graph->xadj);CHKERRQ(ierr);
663674ae819SStefano Zampini     ierr = PetscMalloc(xadj[nvtxs]*sizeof(PetscInt),&mat_graph->adjncy);CHKERRQ(ierr);
664674ae819SStefano Zampini     ierr = PetscMemcpy(mat_graph->xadj,xadj,(nvtxs+1)*sizeof(PetscInt));CHKERRQ(ierr);
665674ae819SStefano Zampini     ierr = PetscMemcpy(mat_graph->adjncy,adjncy,xadj[nvtxs]*sizeof(PetscInt));CHKERRQ(ierr);
666da1bb401SStefano Zampini   } else if (copymode == PETSC_OWN_POINTER) {
6671a83f524SJed Brown     mat_graph->xadj = (PetscInt*)xadj;
6681a83f524SJed Brown     mat_graph->adjncy = (PetscInt*)adjncy;
669674ae819SStefano Zampini   }
670575ad6abSStefano Zampini   mat_graph->nvtxs_csr = nvtxs;
67136e030ebSStefano Zampini   PetscFunctionReturn(0);
67236e030ebSStefano Zampini }
6731e6b0712SBarry Smith 
67436e030ebSStefano Zampini #undef __FUNCT__
675da1bb401SStefano Zampini #define __FUNCT__ "PCBDDCSetLocalAdjacencyGraph"
67636e030ebSStefano Zampini /*@
67728509bceSStefano Zampini  PCBDDCSetLocalAdjacencyGraph - Set adjacency structure (CSR graph) of the local Neumann matrix
67836e030ebSStefano Zampini 
67936e030ebSStefano Zampini    Not collective
68036e030ebSStefano Zampini 
68136e030ebSStefano Zampini    Input Parameters:
68236e030ebSStefano Zampini +  pc - the preconditioning context
68328509bceSStefano Zampini .  nvtxs - number of local vertices of the graph (i.e., the local size of your problem)
68428509bceSStefano Zampini .  xadj, adjncy - the CSR graph
68528509bceSStefano Zampini -  copymode - either PETSC_COPY_VALUES or PETSC_OWN_POINTER.
68636e030ebSStefano Zampini 
68736e030ebSStefano Zampini    Level: intermediate
68836e030ebSStefano Zampini 
68936e030ebSStefano Zampini    Notes:
69036e030ebSStefano Zampini 
69128509bceSStefano Zampini .seealso: PCBDDC,PetscCopyMode
69236e030ebSStefano Zampini @*/
6931a83f524SJed Brown PetscErrorCode PCBDDCSetLocalAdjacencyGraph(PC pc,PetscInt nvtxs,const PetscInt xadj[],const PetscInt adjncy[], PetscCopyMode copymode)
69436e030ebSStefano Zampini {
695575ad6abSStefano Zampini   void (*f)(void) = 0;
69636e030ebSStefano Zampini   PetscErrorCode ierr;
69736e030ebSStefano Zampini 
69836e030ebSStefano Zampini   PetscFunctionBegin;
69936e030ebSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
700674ae819SStefano Zampini   PetscValidIntPointer(xadj,3);
701674ae819SStefano Zampini   PetscValidIntPointer(xadj,4);
702674ae819SStefano Zampini   if (copymode != PETSC_COPY_VALUES && copymode != PETSC_OWN_POINTER) {
703674ae819SStefano Zampini     SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Unsupported copy mode %d in %s\n",copymode,__FUNCT__);
704da1bb401SStefano Zampini   }
70536e030ebSStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetLocalAdjacencyGraph_C",(PC,PetscInt,const PetscInt[],const PetscInt[],PetscCopyMode),(pc,nvtxs,xadj,adjncy,copymode));CHKERRQ(ierr);
706575ad6abSStefano Zampini   /* free arrays if PCBDDC is not the PC type */
707575ad6abSStefano Zampini   ierr = PetscObjectQueryFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",&f);CHKERRQ(ierr);
708575ad6abSStefano Zampini   if (!f && copymode == PETSC_OWN_POINTER) {
709575ad6abSStefano Zampini     ierr = PetscFree(xadj);CHKERRQ(ierr);
710575ad6abSStefano Zampini     ierr = PetscFree(adjncy);CHKERRQ(ierr);
71136e030ebSStefano Zampini   }
71236e030ebSStefano Zampini   PetscFunctionReturn(0);
71336e030ebSStefano Zampini }
7149c0446d6SStefano Zampini /* -------------------------------------------------------------------------- */
7151e6b0712SBarry Smith 
7169c0446d6SStefano Zampini #undef __FUNCT__
71763602bcaSStefano Zampini #define __FUNCT__ "PCBDDCSetDofsSplittingLocal_BDDC"
71863602bcaSStefano Zampini static PetscErrorCode PCBDDCSetDofsSplittingLocal_BDDC(PC pc,PetscInt n_is, IS ISForDofs[])
71963602bcaSStefano Zampini {
72063602bcaSStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
72163602bcaSStefano Zampini   PetscInt i;
72263602bcaSStefano Zampini   PetscErrorCode ierr;
72363602bcaSStefano Zampini 
72463602bcaSStefano Zampini   PetscFunctionBegin;
72563602bcaSStefano Zampini   /* Destroy ISes if they were already set */
72663602bcaSStefano Zampini   for (i=0;i<pcbddc->n_ISForDofsLocal;i++) {
72763602bcaSStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofsLocal[i]);CHKERRQ(ierr);
72863602bcaSStefano Zampini   }
72963602bcaSStefano Zampini   ierr = PetscFree(pcbddc->ISForDofsLocal);CHKERRQ(ierr);
73063602bcaSStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
73163602bcaSStefano Zampini   for (i=0;i<pcbddc->n_ISForDofs;i++) {
73263602bcaSStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofs[i]);CHKERRQ(ierr);
73363602bcaSStefano Zampini   }
73463602bcaSStefano Zampini   ierr = PetscFree(pcbddc->ISForDofs);CHKERRQ(ierr);
73563602bcaSStefano Zampini   pcbddc->n_ISForDofs = 0;
73663602bcaSStefano Zampini   /* allocate space then set */
73763602bcaSStefano Zampini   ierr = PetscMalloc(n_is*sizeof(IS),&pcbddc->ISForDofsLocal);CHKERRQ(ierr);
73863602bcaSStefano Zampini   for (i=0;i<n_is;i++) {
73963602bcaSStefano Zampini     ierr = PetscObjectReference((PetscObject)ISForDofs[i]);CHKERRQ(ierr);
74063602bcaSStefano Zampini     pcbddc->ISForDofsLocal[i]=ISForDofs[i];
74163602bcaSStefano Zampini   }
74263602bcaSStefano Zampini   pcbddc->n_ISForDofsLocal=n_is;
74363602bcaSStefano Zampini   if (n_is) pcbddc->user_provided_isfordofs = PETSC_TRUE;
7441a8a16d1SStefano Zampini   pcbddc->recompute_topography = PETSC_TRUE;
74563602bcaSStefano Zampini   PetscFunctionReturn(0);
74663602bcaSStefano Zampini }
74763602bcaSStefano Zampini 
74863602bcaSStefano Zampini #undef __FUNCT__
74963602bcaSStefano Zampini #define __FUNCT__ "PCBDDCSetDofsSplittingLocal"
75063602bcaSStefano Zampini /*@
75163602bcaSStefano Zampini  PCBDDCSetDofsSplittingLocal - Set index sets defining fields of the local subdomain matrix
75263602bcaSStefano Zampini 
75363602bcaSStefano Zampini    Collective
75463602bcaSStefano Zampini 
75563602bcaSStefano Zampini    Input Parameters:
75663602bcaSStefano Zampini +  pc - the preconditioning context
75763602bcaSStefano Zampini -  n_is - number of index sets defining the fields
75863602bcaSStefano Zampini .  ISForDofs - array of IS describing the fields in local ordering
75963602bcaSStefano Zampini 
76063602bcaSStefano Zampini    Level: intermediate
76163602bcaSStefano Zampini 
76263602bcaSStefano Zampini    Notes: n_is should be the same among processes. Not all nodes need to be listed: unlisted nodes will belong to a different field.
76363602bcaSStefano Zampini 
76463602bcaSStefano Zampini .seealso: PCBDDC
76563602bcaSStefano Zampini @*/
76663602bcaSStefano Zampini PetscErrorCode PCBDDCSetDofsSplittingLocal(PC pc,PetscInt n_is, IS ISForDofs[])
76763602bcaSStefano Zampini {
76863602bcaSStefano Zampini   PetscInt       i;
76963602bcaSStefano Zampini   PetscErrorCode ierr;
77063602bcaSStefano Zampini 
77163602bcaSStefano Zampini   PetscFunctionBegin;
77263602bcaSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
77363602bcaSStefano Zampini   PetscValidLogicalCollectiveInt(pc,n_is,2);
77463602bcaSStefano Zampini   for (i=0;i<n_is;i++) {
77563602bcaSStefano Zampini     PetscCheckSameComm(pc,1,ISForDofs[i],3);
77663602bcaSStefano Zampini     PetscValidHeaderSpecific(ISForDofs[i],IS_CLASSID,3);
77763602bcaSStefano Zampini   }
77863602bcaSStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDofsSplitting_C",(PC,PetscInt,IS[]),(pc,n_is,ISForDofs));CHKERRQ(ierr);
77963602bcaSStefano Zampini   PetscFunctionReturn(0);
78063602bcaSStefano Zampini }
78163602bcaSStefano Zampini /* -------------------------------------------------------------------------- */
78263602bcaSStefano Zampini 
78363602bcaSStefano Zampini #undef __FUNCT__
7849c0446d6SStefano Zampini #define __FUNCT__ "PCBDDCSetDofsSplitting_BDDC"
7859c0446d6SStefano Zampini static PetscErrorCode PCBDDCSetDofsSplitting_BDDC(PC pc,PetscInt n_is, IS ISForDofs[])
7869c0446d6SStefano Zampini {
7879c0446d6SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
7889c0446d6SStefano Zampini   PetscInt i;
7899c0446d6SStefano Zampini   PetscErrorCode ierr;
7909c0446d6SStefano Zampini 
7919c0446d6SStefano Zampini   PetscFunctionBegin;
792da1bb401SStefano Zampini   /* Destroy ISes if they were already set */
7939c0446d6SStefano Zampini   for (i=0;i<pcbddc->n_ISForDofs;i++) {
7949c0446d6SStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofs[i]);CHKERRQ(ierr);
7959c0446d6SStefano Zampini   }
796d11ae9bbSstefano_zampini   ierr = PetscFree(pcbddc->ISForDofs);CHKERRQ(ierr);
79763602bcaSStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
79863602bcaSStefano Zampini   for (i=0;i<pcbddc->n_ISForDofsLocal;i++) {
79963602bcaSStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofsLocal[i]);CHKERRQ(ierr);
80063602bcaSStefano Zampini   }
80163602bcaSStefano Zampini   ierr = PetscFree(pcbddc->ISForDofsLocal);CHKERRQ(ierr);
80263602bcaSStefano Zampini   pcbddc->n_ISForDofsLocal = 0;
803da1bb401SStefano Zampini   /* allocate space then set */
8049c0446d6SStefano Zampini   ierr = PetscMalloc(n_is*sizeof(IS),&pcbddc->ISForDofs);CHKERRQ(ierr);
8059c0446d6SStefano Zampini   for (i=0;i<n_is;i++) {
806da1bb401SStefano Zampini     ierr = PetscObjectReference((PetscObject)ISForDofs[i]);CHKERRQ(ierr);
807da1bb401SStefano Zampini     pcbddc->ISForDofs[i]=ISForDofs[i];
8089c0446d6SStefano Zampini   }
8099c0446d6SStefano Zampini   pcbddc->n_ISForDofs=n_is;
81063602bcaSStefano Zampini   if (n_is) pcbddc->user_provided_isfordofs = PETSC_TRUE;
8111a8a16d1SStefano Zampini   pcbddc->recompute_topography = PETSC_TRUE;
8129c0446d6SStefano Zampini   PetscFunctionReturn(0);
8139c0446d6SStefano Zampini }
8141e6b0712SBarry Smith 
8159c0446d6SStefano Zampini #undef __FUNCT__
8169c0446d6SStefano Zampini #define __FUNCT__ "PCBDDCSetDofsSplitting"
8179c0446d6SStefano Zampini /*@
81863602bcaSStefano Zampini  PCBDDCSetDofsSplitting - Set index sets defining fields of the global matrix
8199c0446d6SStefano Zampini 
82063602bcaSStefano Zampini    Collective
8219c0446d6SStefano Zampini 
8229c0446d6SStefano Zampini    Input Parameters:
8239c0446d6SStefano Zampini +  pc - the preconditioning context
82428509bceSStefano Zampini -  n_is - number of index sets defining the fields
82563602bcaSStefano Zampini .  ISForDofs - array of IS describing the fields in global ordering
8269c0446d6SStefano Zampini 
8279c0446d6SStefano Zampini    Level: intermediate
8289c0446d6SStefano Zampini 
82963602bcaSStefano Zampini    Notes: Any process can list any global node. Not all nodes need to be listed: unlisted nodes will belong to a different field.
8309c0446d6SStefano Zampini 
8319c0446d6SStefano Zampini .seealso: PCBDDC
8329c0446d6SStefano Zampini @*/
8339c0446d6SStefano Zampini PetscErrorCode PCBDDCSetDofsSplitting(PC pc,PetscInt n_is, IS ISForDofs[])
8349c0446d6SStefano Zampini {
8352b510759SStefano Zampini   PetscInt       i;
8369c0446d6SStefano Zampini   PetscErrorCode ierr;
8379c0446d6SStefano Zampini 
8389c0446d6SStefano Zampini   PetscFunctionBegin;
8399c0446d6SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
84063602bcaSStefano Zampini   PetscValidLogicalCollectiveInt(pc,n_is,2);
8412b510759SStefano Zampini   for (i=0;i<n_is;i++) {
84263602bcaSStefano Zampini     PetscCheckSameComm(pc,1,ISForDofs[i],3);
84363602bcaSStefano Zampini     PetscValidHeaderSpecific(ISForDofs[i],IS_CLASSID,3);
8442b510759SStefano Zampini   }
8459c0446d6SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDofsSplitting_C",(PC,PetscInt,IS[]),(pc,n_is,ISForDofs));CHKERRQ(ierr);
8469c0446d6SStefano Zampini   PetscFunctionReturn(0);
8479c0446d6SStefano Zampini }
848da1bb401SStefano Zampini /* -------------------------------------------------------------------------- */
849534831adSStefano Zampini #undef __FUNCT__
850534831adSStefano Zampini #define __FUNCT__ "PCPreSolve_BDDC"
851534831adSStefano Zampini /* -------------------------------------------------------------------------- */
852534831adSStefano Zampini /*
853534831adSStefano Zampini    PCPreSolve_BDDC - Changes the right hand side and (if necessary) the initial
854534831adSStefano Zampini                      guess if a transformation of basis approach has been selected.
8559c0446d6SStefano Zampini 
856534831adSStefano Zampini    Input Parameter:
857534831adSStefano Zampini +  pc - the preconditioner contex
858534831adSStefano Zampini 
859534831adSStefano Zampini    Application Interface Routine: PCPreSolve()
860534831adSStefano Zampini 
861534831adSStefano Zampini    Notes:
862534831adSStefano Zampini    The interface routine PCPreSolve() is not usually called directly by
863534831adSStefano Zampini    the user, but instead is called by KSPSolve().
864534831adSStefano Zampini */
865534831adSStefano Zampini static PetscErrorCode PCPreSolve_BDDC(PC pc, KSP ksp, Vec rhs, Vec x)
866534831adSStefano Zampini {
867534831adSStefano Zampini   PetscErrorCode ierr;
868534831adSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
869534831adSStefano Zampini   PC_IS          *pcis = (PC_IS*)(pc->data);
870534831adSStefano Zampini   Mat_IS         *matis = (Mat_IS*)pc->pmat->data;
871534831adSStefano Zampini   Mat            temp_mat;
8723972b0daSStefano Zampini   IS             dirIS;
8733972b0daSStefano Zampini   Vec            used_vec;
87482ba6b80SStefano Zampini   PetscBool      guess_nonzero;
875534831adSStefano Zampini 
876534831adSStefano Zampini   PetscFunctionBegin;
87785c4d303SStefano Zampini   /* if we are working with cg, one dirichlet solve can be avoided during Krylov iterations */
87885c4d303SStefano Zampini   if (ksp) {
87985c4d303SStefano Zampini     PetscBool iscg;
88085c4d303SStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)ksp,KSPCG,&iscg);CHKERRQ(ierr);
88185c4d303SStefano Zampini     if (!iscg) {
88285c4d303SStefano Zampini       ierr = PCBDDCSetUseExactDirichlet(pc,PETSC_FALSE);CHKERRQ(ierr);
88385c4d303SStefano Zampini     }
88485c4d303SStefano Zampini   }
88585c4d303SStefano Zampini   /* Creates parallel work vectors used in presolve */
88662a6ff1dSStefano Zampini   if (!pcbddc->original_rhs) {
88762a6ff1dSStefano Zampini     ierr = VecDuplicate(pcis->vec1_global,&pcbddc->original_rhs);CHKERRQ(ierr);
88862a6ff1dSStefano Zampini   }
88962a6ff1dSStefano Zampini   if (!pcbddc->temp_solution) {
89062a6ff1dSStefano Zampini     ierr = VecDuplicate(pcis->vec1_global,&pcbddc->temp_solution);CHKERRQ(ierr);
89162a6ff1dSStefano Zampini   }
8923972b0daSStefano Zampini   if (x) {
8933972b0daSStefano Zampini     ierr = PetscObjectReference((PetscObject)x);CHKERRQ(ierr);
8943972b0daSStefano Zampini     used_vec = x;
8953972b0daSStefano Zampini   } else {
8963972b0daSStefano Zampini     ierr = PetscObjectReference((PetscObject)pcbddc->temp_solution);CHKERRQ(ierr);
8973972b0daSStefano Zampini     used_vec = pcbddc->temp_solution;
8983972b0daSStefano Zampini     ierr = VecSet(used_vec,0.0);CHKERRQ(ierr);
8993972b0daSStefano Zampini   }
9003972b0daSStefano Zampini   /* hack into ksp data structure PCPreSolve comes earlier in src/ksp/ksp/interface/itfunc.c */
9013972b0daSStefano Zampini   if (ksp) {
9023972b0daSStefano Zampini     ierr = KSPGetInitialGuessNonzero(ksp,&guess_nonzero);CHKERRQ(ierr);
9033972b0daSStefano Zampini     if (!guess_nonzero) {
9043972b0daSStefano Zampini       ierr = VecSet(used_vec,0.0);CHKERRQ(ierr);
9053972b0daSStefano Zampini     }
9063972b0daSStefano Zampini   }
9073308cffdSStefano Zampini 
9083972b0daSStefano Zampini   /* store the original rhs */
9093972b0daSStefano Zampini   ierr = VecCopy(rhs,pcbddc->original_rhs);CHKERRQ(ierr);
9103972b0daSStefano Zampini 
9113972b0daSStefano Zampini   /* Take into account zeroed rows -> change rhs and store solution removed */
912785d1243SStefano Zampini   /* note that Dirichlet boundaries in global ordering (if any) has already been translated into local ordering in PCBDDCAnalyzeInterface */
91382ba6b80SStefano Zampini   ierr = PCBDDCGetDirichletBoundariesLocal(pc,&dirIS);CHKERRQ(ierr);
91482ba6b80SStefano Zampini   if (rhs && dirIS) {
915785d1243SStefano Zampini     PetscInt    dirsize,i,*is_indices;
916785d1243SStefano Zampini     PetscScalar *array_x,*array_diagonal;
917785d1243SStefano Zampini 
9183972b0daSStefano Zampini     ierr = MatGetDiagonal(pc->pmat,pcis->vec1_global);CHKERRQ(ierr);
9193972b0daSStefano Zampini     ierr = VecPointwiseDivide(pcis->vec1_global,rhs,pcis->vec1_global);CHKERRQ(ierr);
9203972b0daSStefano Zampini     ierr = VecScatterBegin(matis->ctx,pcis->vec1_global,pcis->vec2_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
9213972b0daSStefano Zampini     ierr = VecScatterEnd(matis->ctx,pcis->vec1_global,pcis->vec2_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
9223972b0daSStefano Zampini     ierr = VecScatterBegin(matis->ctx,used_vec,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
9233972b0daSStefano Zampini     ierr = VecScatterEnd(matis->ctx,used_vec,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
92482ba6b80SStefano Zampini     ierr = ISGetLocalSize(dirIS,&dirsize);CHKERRQ(ierr);
9253972b0daSStefano Zampini     ierr = VecGetArray(pcis->vec1_N,&array_x);CHKERRQ(ierr);
9263972b0daSStefano Zampini     ierr = VecGetArray(pcis->vec2_N,&array_diagonal);CHKERRQ(ierr);
9273972b0daSStefano Zampini     ierr = ISGetIndices(dirIS,(const PetscInt**)&is_indices);CHKERRQ(ierr);
9282fa5cd67SKarl Rupp     for (i=0; i<dirsize; i++) array_x[is_indices[i]] = array_diagonal[is_indices[i]];
9293972b0daSStefano Zampini     ierr = ISRestoreIndices(dirIS,(const PetscInt**)&is_indices);CHKERRQ(ierr);
9303972b0daSStefano Zampini     ierr = VecRestoreArray(pcis->vec2_N,&array_diagonal);CHKERRQ(ierr);
9313972b0daSStefano Zampini     ierr = VecRestoreArray(pcis->vec1_N,&array_x);CHKERRQ(ierr);
9323972b0daSStefano Zampini     ierr = VecScatterBegin(matis->ctx,pcis->vec1_N,used_vec,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
9333972b0daSStefano Zampini     ierr = VecScatterEnd(matis->ctx,pcis->vec1_N,used_vec,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
934b76ba322SStefano Zampini 
9353972b0daSStefano Zampini     /* remove the computed solution from the rhs */
9363972b0daSStefano Zampini     ierr = VecScale(used_vec,-1.0);CHKERRQ(ierr);
9373972b0daSStefano Zampini     ierr = MatMultAdd(pc->pmat,used_vec,rhs,rhs);CHKERRQ(ierr);
9383972b0daSStefano Zampini     ierr = VecScale(used_vec,-1.0);CHKERRQ(ierr);
9393308cffdSStefano Zampini   }
940b76ba322SStefano Zampini 
941b76ba322SStefano Zampini   /* store partially computed solution and set initial guess */
9423972b0daSStefano Zampini   if (x) {
9433972b0daSStefano Zampini     ierr = VecCopy(used_vec,pcbddc->temp_solution);CHKERRQ(ierr);
9443972b0daSStefano Zampini     ierr = VecSet(used_vec,0.0);CHKERRQ(ierr);
94585c4d303SStefano Zampini     if (pcbddc->use_exact_dirichlet_trick) {
946b76ba322SStefano Zampini       ierr = VecScatterBegin(pcis->global_to_D,rhs,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
947b76ba322SStefano Zampini       ierr = VecScatterEnd  (pcis->global_to_D,rhs,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
948b76ba322SStefano Zampini       ierr = KSPSolve(pcbddc->ksp_D,pcis->vec1_D,pcis->vec2_D);CHKERRQ(ierr);
949b76ba322SStefano Zampini       ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,used_vec,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
950b76ba322SStefano Zampini       ierr = VecScatterEnd  (pcis->global_to_D,pcis->vec2_D,used_vec,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
951b76ba322SStefano Zampini       if (ksp) {
952b76ba322SStefano Zampini         ierr = KSPSetInitialGuessNonzero(ksp,PETSC_TRUE);CHKERRQ(ierr);
953b76ba322SStefano Zampini       }
954b76ba322SStefano Zampini     }
9553972b0daSStefano Zampini   }
956b76ba322SStefano Zampini 
95792e3dcfbSStefano Zampini   /* prepare MatMult and rhs for solver */
958674ae819SStefano Zampini   if (pcbddc->use_change_of_basis) {
959b76ba322SStefano Zampini     /* swap pointers for local matrices */
960b76ba322SStefano Zampini     temp_mat = matis->A;
961b76ba322SStefano Zampini     matis->A = pcbddc->local_mat;
962b76ba322SStefano Zampini     pcbddc->local_mat = temp_mat;
96392e3dcfbSStefano Zampini     if (rhs) {
964b76ba322SStefano Zampini       /* Get local rhs and apply transformation of basis */
965b76ba322SStefano Zampini       ierr = VecScatterBegin(pcis->global_to_B,rhs,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
966b76ba322SStefano Zampini       ierr = VecScatterEnd  (pcis->global_to_B,rhs,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
967b76ba322SStefano Zampini       /* from original basis to modified basis */
968b76ba322SStefano Zampini       ierr = MatMultTranspose(pcbddc->ChangeOfBasisMatrix,pcis->vec1_B,pcis->vec2_B);CHKERRQ(ierr);
969b76ba322SStefano Zampini       /* put back modified values into the global vec using INSERT_VALUES copy mode */
970b76ba322SStefano Zampini       ierr = VecScatterBegin(pcis->global_to_B,pcis->vec2_B,rhs,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
971b76ba322SStefano Zampini       ierr = VecScatterEnd  (pcis->global_to_B,pcis->vec2_B,rhs,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
972674ae819SStefano Zampini     }
97392e3dcfbSStefano Zampini   }
97492e3dcfbSStefano Zampini 
97592e3dcfbSStefano Zampini   /* remove nullspace if present */
9760bdf917eSStefano Zampini   if (ksp && pcbddc->NullSpace) {
977d0195637SJed Brown     ierr = MatNullSpaceRemove(pcbddc->NullSpace,used_vec);CHKERRQ(ierr);
978d0195637SJed Brown     ierr = MatNullSpaceRemove(pcbddc->NullSpace,rhs);CHKERRQ(ierr);
979b76ba322SStefano Zampini   }
9800bdf917eSStefano Zampini   ierr = VecDestroy(&used_vec);CHKERRQ(ierr);
981534831adSStefano Zampini   PetscFunctionReturn(0);
982534831adSStefano Zampini }
983534831adSStefano Zampini /* -------------------------------------------------------------------------- */
984534831adSStefano Zampini #undef __FUNCT__
985534831adSStefano Zampini #define __FUNCT__ "PCPostSolve_BDDC"
986534831adSStefano Zampini /* -------------------------------------------------------------------------- */
987534831adSStefano Zampini /*
988534831adSStefano Zampini    PCPostSolve_BDDC - Changes the computed solution if a transformation of basis
989534831adSStefano Zampini                      approach has been selected. Also, restores rhs to its original state.
990534831adSStefano Zampini 
991534831adSStefano Zampini    Input Parameter:
992534831adSStefano Zampini +  pc - the preconditioner contex
993534831adSStefano Zampini 
994534831adSStefano Zampini    Application Interface Routine: PCPostSolve()
995534831adSStefano Zampini 
996534831adSStefano Zampini    Notes:
997534831adSStefano Zampini    The interface routine PCPostSolve() is not usually called directly by
998534831adSStefano Zampini    the user, but instead is called by KSPSolve().
999534831adSStefano Zampini */
1000534831adSStefano Zampini static PetscErrorCode PCPostSolve_BDDC(PC pc, KSP ksp, Vec rhs, Vec x)
1001534831adSStefano Zampini {
1002534831adSStefano Zampini   PetscErrorCode ierr;
1003534831adSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
1004534831adSStefano Zampini   PC_IS          *pcis   = (PC_IS*)(pc->data);
1005534831adSStefano Zampini   Mat_IS         *matis = (Mat_IS*)pc->pmat->data;
1006534831adSStefano Zampini   Mat            temp_mat;
1007534831adSStefano Zampini 
1008534831adSStefano Zampini   PetscFunctionBegin;
1009674ae819SStefano Zampini   if (pcbddc->use_change_of_basis) {
1010534831adSStefano Zampini     /* swap pointers for local matrices */
1011534831adSStefano Zampini     temp_mat = matis->A;
1012534831adSStefano Zampini     matis->A = pcbddc->local_mat;
1013534831adSStefano Zampini     pcbddc->local_mat = temp_mat;
10143425bc38SStefano Zampini   }
10153308cffdSStefano Zampini   if (pcbddc->use_change_of_basis && x) {
1016534831adSStefano Zampini     /* Get Local boundary and apply transformation of basis to solution vector */
1017534831adSStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,x,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1018534831adSStefano Zampini     ierr = VecScatterEnd  (pcis->global_to_B,x,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1019534831adSStefano Zampini     /* from modified basis to original basis */
1020534831adSStefano Zampini     ierr = MatMult(pcbddc->ChangeOfBasisMatrix,pcis->vec1_B,pcis->vec2_B);CHKERRQ(ierr);
1021534831adSStefano Zampini     /* put back modified values into the global vec using INSERT_VALUES copy mode */
1022534831adSStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,pcis->vec2_B,x,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1023534831adSStefano Zampini     ierr = VecScatterEnd  (pcis->global_to_B,pcis->vec2_B,x,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1024534831adSStefano Zampini   }
10253972b0daSStefano Zampini   /* add solution removed in presolve */
10263425bc38SStefano Zampini   if (x) {
10273425bc38SStefano Zampini     ierr = VecAXPY(x,1.0,pcbddc->temp_solution);CHKERRQ(ierr);
10283425bc38SStefano Zampini   }
1029fb223d50SStefano Zampini   /* restore rhs to its original state */
1030fb223d50SStefano Zampini   if (rhs) {
1031fb223d50SStefano Zampini     ierr = VecCopy(pcbddc->original_rhs,rhs);CHKERRQ(ierr);
1032fb223d50SStefano Zampini   }
1033534831adSStefano Zampini   PetscFunctionReturn(0);
1034534831adSStefano Zampini }
1035534831adSStefano Zampini /* -------------------------------------------------------------------------- */
103653cdbc3dSStefano Zampini #undef __FUNCT__
103753cdbc3dSStefano Zampini #define __FUNCT__ "PCSetUp_BDDC"
10380c7d97c5SJed Brown /* -------------------------------------------------------------------------- */
10390c7d97c5SJed Brown /*
10400c7d97c5SJed Brown    PCSetUp_BDDC - Prepares for the use of the BDDC preconditioner
10410c7d97c5SJed Brown                   by setting data structures and options.
10420c7d97c5SJed Brown 
10430c7d97c5SJed Brown    Input Parameter:
104453cdbc3dSStefano Zampini +  pc - the preconditioner context
10450c7d97c5SJed Brown 
10460c7d97c5SJed Brown    Application Interface Routine: PCSetUp()
10470c7d97c5SJed Brown 
10480c7d97c5SJed Brown    Notes:
10490c7d97c5SJed Brown    The interface routine PCSetUp() is not usually called directly by
10500c7d97c5SJed Brown    the user, but instead is called by PCApply() if necessary.
10510c7d97c5SJed Brown */
105253cdbc3dSStefano Zampini PetscErrorCode PCSetUp_BDDC(PC pc)
10530c7d97c5SJed Brown {
10540c7d97c5SJed Brown   PetscErrorCode   ierr;
10550c7d97c5SJed Brown   PC_BDDC*         pcbddc = (PC_BDDC*)pc->data;
1056f4ddd8eeSStefano Zampini   MatNullSpace     nearnullspace;
1057674ae819SStefano Zampini   MatStructure     flag;
1058674ae819SStefano Zampini   PetscBool        computeis,computetopography,computesolvers;
1059165b64e2SStefano Zampini   PetscBool        new_nearnullspace_provided;
10600c7d97c5SJed Brown 
10610c7d97c5SJed Brown   PetscFunctionBegin;
1062f4ddd8eeSStefano Zampini   /* the following lines of code should be replaced by a better logic between PCIS, PCNN, PCBDDC and other future nonoverlapping preconditioners */
1063f4ddd8eeSStefano Zampini   /* PCIS does not support MatStructure flags different from SAME_PRECONDITIONER */
10643b03a366Sstefano_zampini   /* For BDDC we need to define a local "Neumann" problem different to that defined in PCISSetup
1065fcd409f5SStefano Zampini      Also, BDDC directly build the Dirichlet problem */
1066f4ddd8eeSStefano Zampini 
1067f4ddd8eeSStefano Zampini   /* split work */
1068674ae819SStefano Zampini   if (pc->setupcalled) {
1069674ae819SStefano Zampini     computeis = PETSC_FALSE;
1070674ae819SStefano Zampini     ierr = PCGetOperators(pc,NULL,NULL,&flag);CHKERRQ(ierr);
1071674ae819SStefano Zampini     if (flag == SAME_PRECONDITIONER) {
1072f4ddd8eeSStefano Zampini       PetscFunctionReturn(0);
1073674ae819SStefano Zampini     } else if (flag == SAME_NONZERO_PATTERN) {
1074674ae819SStefano Zampini       computetopography = PETSC_FALSE;
1075674ae819SStefano Zampini       computesolvers = PETSC_TRUE;
1076674ae819SStefano Zampini     } else { /* DIFFERENT_NONZERO_PATTERN */
1077674ae819SStefano Zampini       computetopography = PETSC_TRUE;
1078674ae819SStefano Zampini       computesolvers = PETSC_TRUE;
1079674ae819SStefano Zampini     }
1080674ae819SStefano Zampini   } else {
1081674ae819SStefano Zampini     computeis = PETSC_TRUE;
1082674ae819SStefano Zampini     computetopography = PETSC_TRUE;
1083674ae819SStefano Zampini     computesolvers = PETSC_TRUE;
1084674ae819SStefano Zampini   }
1085fb180af4SStefano Zampini   if (pcbddc->recompute_topography) {
1086fb180af4SStefano Zampini     computetopography = PETSC_TRUE;
1087fb180af4SStefano Zampini   }
1088f4ddd8eeSStefano Zampini 
1089f4ddd8eeSStefano Zampini   /* Get stdout for dbg */
109070cf5478SStefano Zampini   if (pcbddc->dbg_flag) {
109170cf5478SStefano Zampini     if (!pcbddc->dbg_viewer) {
1092f4ddd8eeSStefano Zampini       ierr = PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)pc),&pcbddc->dbg_viewer);CHKERRQ(ierr);
1093f4ddd8eeSStefano Zampini       ierr = PetscViewerASCIISynchronizedAllow(pcbddc->dbg_viewer,PETSC_TRUE);CHKERRQ(ierr);
109470cf5478SStefano Zampini     }
1095f4ddd8eeSStefano Zampini     if (pcbddc->current_level) {
1096f4ddd8eeSStefano Zampini       ierr = PetscViewerASCIIAddTab(pcbddc->dbg_viewer,2);CHKERRQ(ierr);
1097f4ddd8eeSStefano Zampini     }
1098f4ddd8eeSStefano Zampini   }
1099f4ddd8eeSStefano Zampini 
1100fcd409f5SStefano Zampini   /* Set up all the "iterative substructuring" common block without computing solvers */
1101674ae819SStefano Zampini   if (computeis) {
1102fcd409f5SStefano Zampini     /* HACK INTO PCIS */
1103fcd409f5SStefano Zampini     PC_IS* pcis = (PC_IS*)pc->data;
1104fcd409f5SStefano Zampini     pcis->computesolvers = PETSC_FALSE;
1105674ae819SStefano Zampini     ierr = PCISSetUp(pc);CHKERRQ(ierr);
110639e2fb2aSStefano Zampini     ierr = ISLocalToGlobalMappingCreateIS(pcis->is_B_local,&pcbddc->BtoNmap);CHKERRQ(ierr);
1107674ae819SStefano Zampini   }
1108f4ddd8eeSStefano Zampini 
1109f4ddd8eeSStefano Zampini   /* Analyze interface */
1110674ae819SStefano Zampini   if (computetopography) {
1111674ae819SStefano Zampini     ierr = PCBDDCAnalyzeInterface(pc);CHKERRQ(ierr);
1112fb8d54d4SStefano Zampini   }
1113fb8d54d4SStefano Zampini 
1114f4ddd8eeSStefano Zampini   /* infer if NullSpace object attached to Mat via MatSetNearNullSpace has changed */
1115fb8d54d4SStefano Zampini   new_nearnullspace_provided = PETSC_FALSE;
1116f4ddd8eeSStefano Zampini   ierr = MatGetNearNullSpace(pc->pmat,&nearnullspace);CHKERRQ(ierr);
1117f4ddd8eeSStefano Zampini   if (pcbddc->onearnullspace) { /* already used nearnullspace */
1118f4ddd8eeSStefano Zampini     if (!nearnullspace) { /* near null space attached to mat has been destroyed */
1119f4ddd8eeSStefano Zampini       new_nearnullspace_provided = PETSC_TRUE;
1120f4ddd8eeSStefano Zampini     } else {
1121f4ddd8eeSStefano Zampini       /* determine if the two nullspaces are different (should be lightweight) */
1122f4ddd8eeSStefano Zampini       if (nearnullspace != pcbddc->onearnullspace) {
1123f4ddd8eeSStefano Zampini         new_nearnullspace_provided = PETSC_TRUE;
1124165b64e2SStefano Zampini       } else { /* maybe the user has changed the content of the nearnullspace so check vectors ObjectStateId */
1125f4ddd8eeSStefano Zampini         PetscInt         i;
1126165b64e2SStefano Zampini         const Vec        *nearnullvecs;
1127165b64e2SStefano Zampini         PetscObjectState state;
1128165b64e2SStefano Zampini         PetscInt         nnsp_size;
1129165b64e2SStefano Zampini         ierr = MatNullSpaceGetVecs(nearnullspace,NULL,&nnsp_size,&nearnullvecs);CHKERRQ(ierr);
1130f4ddd8eeSStefano Zampini         for (i=0;i<nnsp_size;i++) {
1131f4ddd8eeSStefano Zampini           ierr = PetscObjectStateGet((PetscObject)nearnullvecs[i],&state);CHKERRQ(ierr);
1132165b64e2SStefano Zampini           if (pcbddc->onearnullvecs_state[i] != state) {
1133f4ddd8eeSStefano Zampini             new_nearnullspace_provided = PETSC_TRUE;
1134f4ddd8eeSStefano Zampini             break;
1135f4ddd8eeSStefano Zampini           }
1136f4ddd8eeSStefano Zampini         }
1137f4ddd8eeSStefano Zampini       }
1138f4ddd8eeSStefano Zampini     }
1139f4ddd8eeSStefano Zampini   } else {
1140f4ddd8eeSStefano Zampini     if (!nearnullspace) { /* both nearnullspaces are null */
1141f4ddd8eeSStefano Zampini       new_nearnullspace_provided = PETSC_FALSE;
1142f4ddd8eeSStefano Zampini     } else { /* nearnullspace attached later */
1143f4ddd8eeSStefano Zampini       new_nearnullspace_provided = PETSC_TRUE;
1144f4ddd8eeSStefano Zampini     }
1145f4ddd8eeSStefano Zampini   }
1146f4ddd8eeSStefano Zampini 
1147f4ddd8eeSStefano Zampini   /* Setup constraints and related work vectors */
1148727cdba6SStefano Zampini   /* reset primal space flags */
1149f4ddd8eeSStefano Zampini   pcbddc->new_primal_space = PETSC_FALSE;
1150727cdba6SStefano Zampini   pcbddc->new_primal_space_local = PETSC_FALSE;
1151fb8d54d4SStefano Zampini   if (computetopography || new_nearnullspace_provided) {
1152727cdba6SStefano Zampini     /* It also sets the primal space flags */
1153674ae819SStefano Zampini     ierr = PCBDDCConstraintsSetUp(pc);CHKERRQ(ierr);
1154e7b262bdSStefano Zampini     /* Allocate needed local vectors (which depends on quantities defined during ConstraintsSetUp) */
1155f4ddd8eeSStefano Zampini     ierr = PCBDDCSetUpLocalWorkVectors(pc);CHKERRQ(ierr);
1156674ae819SStefano Zampini   }
1157fb8d54d4SStefano Zampini 
1158f4ddd8eeSStefano Zampini   if (computesolvers || pcbddc->new_primal_space) {
1159674ae819SStefano Zampini     /* reset data */
1160674ae819SStefano Zampini     ierr = PCBDDCScalingDestroy(pc);CHKERRQ(ierr);
116199cc7994SStefano Zampini     /* Create coarse and local stuffs */
116299cc7994SStefano Zampini     ierr = PCBDDCSetUpSolvers(pc);CHKERRQ(ierr);
1163674ae819SStefano Zampini     ierr = PCBDDCScalingSetUp(pc);CHKERRQ(ierr);
11640c7d97c5SJed Brown   }
116570cf5478SStefano Zampini 
11662b510759SStefano Zampini   if (pcbddc->dbg_flag && pcbddc->current_level) {
11672b510759SStefano Zampini     ierr = PetscViewerASCIISubtractTab(pcbddc->dbg_viewer,2);CHKERRQ(ierr);
11682b510759SStefano Zampini   }
11690c7d97c5SJed Brown   PetscFunctionReturn(0);
11700c7d97c5SJed Brown }
11710c7d97c5SJed Brown 
11720c7d97c5SJed Brown /* -------------------------------------------------------------------------- */
11730c7d97c5SJed Brown /*
117450efa1b5SStefano Zampini    PCApply_BDDC - Applies the BDDC operator to a vector.
11750c7d97c5SJed Brown 
11760c7d97c5SJed Brown    Input Parameters:
11770c7d97c5SJed Brown .  pc - the preconditioner context
11780c7d97c5SJed Brown .  r - input vector (global)
11790c7d97c5SJed Brown 
11800c7d97c5SJed Brown    Output Parameter:
11810c7d97c5SJed Brown .  z - output vector (global)
11820c7d97c5SJed Brown 
11830c7d97c5SJed Brown    Application Interface Routine: PCApply()
11840c7d97c5SJed Brown  */
11850c7d97c5SJed Brown #undef __FUNCT__
11860c7d97c5SJed Brown #define __FUNCT__ "PCApply_BDDC"
118753cdbc3dSStefano Zampini PetscErrorCode PCApply_BDDC(PC pc,Vec r,Vec z)
11880c7d97c5SJed Brown {
11890c7d97c5SJed Brown   PC_IS             *pcis = (PC_IS*)(pc->data);
11900c7d97c5SJed Brown   PC_BDDC           *pcbddc = (PC_BDDC*)(pc->data);
11910c7d97c5SJed Brown   PetscErrorCode    ierr;
11923b03a366Sstefano_zampini   const PetscScalar one = 1.0;
11933b03a366Sstefano_zampini   const PetscScalar m_one = -1.0;
11942617d88aSStefano Zampini   const PetscScalar zero = 0.0;
11950c7d97c5SJed Brown 
11960c7d97c5SJed Brown /* This code is similar to that provided in nn.c for PCNN
11970c7d97c5SJed Brown    NN interface preconditioner changed to BDDC
11988eeda7d8SStefano Zampini    Added support for M_3 preconditioner in the reference article (code is active if pcbddc->switch_static = PETSC_TRUE) */
11990c7d97c5SJed Brown 
12000c7d97c5SJed Brown   PetscFunctionBegin;
120185c4d303SStefano Zampini   if (!pcbddc->use_exact_dirichlet_trick) {
12020c7d97c5SJed Brown     /* First Dirichlet solve */
12030c7d97c5SJed Brown     ierr = VecScatterBegin(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
12040c7d97c5SJed Brown     ierr = VecScatterEnd(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
120553cdbc3dSStefano Zampini     ierr = KSPSolve(pcbddc->ksp_D,pcis->vec1_D,pcis->vec2_D);CHKERRQ(ierr);
12060c7d97c5SJed Brown     /*
12070c7d97c5SJed Brown       Assembling right hand side for BDDC operator
1208674ae819SStefano Zampini       - pcis->vec1_D for the Dirichlet part (if needed, i.e. prec_flag=PETSC_TRUE)
1209674ae819SStefano Zampini       - pcis->vec1_B the interface part of the global vector z
12100c7d97c5SJed Brown     */
12110c7d97c5SJed Brown     ierr = VecScale(pcis->vec2_D,m_one);CHKERRQ(ierr);
12120c7d97c5SJed Brown     ierr = MatMult(pcis->A_BI,pcis->vec2_D,pcis->vec1_B);CHKERRQ(ierr);
12138eeda7d8SStefano Zampini     if (pcbddc->switch_static) { ierr = MatMultAdd(pcis->A_II,pcis->vec2_D,pcis->vec1_D,pcis->vec1_D);CHKERRQ(ierr); }
12140c7d97c5SJed Brown     ierr = VecScale(pcis->vec2_D,m_one);CHKERRQ(ierr);
12150c7d97c5SJed Brown     ierr = VecCopy(r,z);CHKERRQ(ierr);
12160c7d97c5SJed Brown     ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
12170c7d97c5SJed Brown     ierr = VecScatterEnd(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1218674ae819SStefano Zampini     ierr = PCBDDCScalingRestriction(pc,z,pcis->vec1_B);CHKERRQ(ierr);
1219b76ba322SStefano Zampini   } else {
12200bdf917eSStefano Zampini     ierr = VecSet(pcis->vec1_D,zero);CHKERRQ(ierr);
1221b76ba322SStefano Zampini     ierr = VecSet(pcis->vec2_D,zero);CHKERRQ(ierr);
1222674ae819SStefano Zampini     ierr = PCBDDCScalingRestriction(pc,r,pcis->vec1_B);CHKERRQ(ierr);
1223b76ba322SStefano Zampini   }
1224b76ba322SStefano Zampini 
12252617d88aSStefano Zampini   /* Apply interface preconditioner
12262617d88aSStefano Zampini      input/output vecs: pcis->vec1_B and pcis->vec1_D */
1227dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(pc,PETSC_FALSE);CHKERRQ(ierr);
12282617d88aSStefano Zampini 
1229674ae819SStefano Zampini   /* Apply transpose of partition of unity operator */
1230674ae819SStefano Zampini   ierr = PCBDDCScalingExtension(pc,pcis->vec1_B,z);CHKERRQ(ierr);
12310c7d97c5SJed Brown 
12323b03a366Sstefano_zampini   /* Second Dirichlet solve and assembling of output */
12330c7d97c5SJed Brown   ierr = VecScatterBegin(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
12340c7d97c5SJed Brown   ierr = VecScatterEnd(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
12350c7d97c5SJed Brown   ierr = MatMult(pcis->A_IB,pcis->vec1_B,pcis->vec3_D);CHKERRQ(ierr);
12368eeda7d8SStefano Zampini   if (pcbddc->switch_static) { ierr = MatMultAdd(pcis->A_II,pcis->vec1_D,pcis->vec3_D,pcis->vec3_D);CHKERRQ(ierr); }
1237df187020SStefano Zampini   ierr = KSPSolve(pcbddc->ksp_D,pcis->vec3_D,pcis->vec4_D);CHKERRQ(ierr);
1238df187020SStefano Zampini   ierr = VecScale(pcis->vec4_D,m_one);CHKERRQ(ierr);
1239df187020SStefano Zampini   if (pcbddc->switch_static) { ierr = VecAXPY(pcis->vec4_D,one,pcis->vec1_D);CHKERRQ(ierr); }
1240df187020SStefano Zampini   ierr = VecAXPY(pcis->vec2_D,one,pcis->vec4_D);CHKERRQ(ierr);
12410c7d97c5SJed Brown   ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
12420c7d97c5SJed Brown   ierr = VecScatterEnd(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
12430c7d97c5SJed Brown   PetscFunctionReturn(0);
12440c7d97c5SJed Brown }
124550efa1b5SStefano Zampini 
124650efa1b5SStefano Zampini /* -------------------------------------------------------------------------- */
124750efa1b5SStefano Zampini /*
124850efa1b5SStefano Zampini    PCApplyTranspose_BDDC - Applies the transpose of the BDDC operator to a vector.
124950efa1b5SStefano Zampini 
125050efa1b5SStefano Zampini    Input Parameters:
125150efa1b5SStefano Zampini .  pc - the preconditioner context
125250efa1b5SStefano Zampini .  r - input vector (global)
125350efa1b5SStefano Zampini 
125450efa1b5SStefano Zampini    Output Parameter:
125550efa1b5SStefano Zampini .  z - output vector (global)
125650efa1b5SStefano Zampini 
125750efa1b5SStefano Zampini    Application Interface Routine: PCApplyTranspose()
125850efa1b5SStefano Zampini  */
125950efa1b5SStefano Zampini #undef __FUNCT__
126050efa1b5SStefano Zampini #define __FUNCT__ "PCApplyTranspose_BDDC"
126150efa1b5SStefano Zampini PetscErrorCode PCApplyTranspose_BDDC(PC pc,Vec r,Vec z)
126250efa1b5SStefano Zampini {
126350efa1b5SStefano Zampini   PC_IS             *pcis = (PC_IS*)(pc->data);
126450efa1b5SStefano Zampini   PC_BDDC           *pcbddc = (PC_BDDC*)(pc->data);
126550efa1b5SStefano Zampini   PetscErrorCode    ierr;
126650efa1b5SStefano Zampini   const PetscScalar one = 1.0;
126750efa1b5SStefano Zampini   const PetscScalar m_one = -1.0;
126850efa1b5SStefano Zampini   const PetscScalar zero = 0.0;
126950efa1b5SStefano Zampini 
127050efa1b5SStefano Zampini   PetscFunctionBegin;
127150efa1b5SStefano Zampini   if (!pcbddc->use_exact_dirichlet_trick) {
127250efa1b5SStefano Zampini     /* First Dirichlet solve */
127350efa1b5SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
127450efa1b5SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
127550efa1b5SStefano Zampini     ierr = KSPSolveTranspose(pcbddc->ksp_D,pcis->vec1_D,pcis->vec2_D);CHKERRQ(ierr);
127650efa1b5SStefano Zampini     /*
127750efa1b5SStefano Zampini       Assembling right hand side for BDDC operator
127850efa1b5SStefano Zampini       - pcis->vec1_D for the Dirichlet part (if needed, i.e. prec_flag=PETSC_TRUE)
127950efa1b5SStefano Zampini       - pcis->vec1_B the interface part of the global vector z
128050efa1b5SStefano Zampini     */
128150efa1b5SStefano Zampini     ierr = VecScale(pcis->vec2_D,m_one);CHKERRQ(ierr);
128250efa1b5SStefano Zampini     ierr = MatMultTranspose(pcis->A_IB,pcis->vec2_D,pcis->vec1_B);CHKERRQ(ierr);
128350efa1b5SStefano Zampini     if (pcbddc->switch_static) { ierr = MatMultTransposeAdd(pcis->A_II,pcis->vec2_D,pcis->vec1_D,pcis->vec1_D);CHKERRQ(ierr); }
128450efa1b5SStefano Zampini     ierr = VecScale(pcis->vec2_D,m_one);CHKERRQ(ierr);
128550efa1b5SStefano Zampini     ierr = VecCopy(r,z);CHKERRQ(ierr);
128650efa1b5SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
128750efa1b5SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
128850efa1b5SStefano Zampini     ierr = PCBDDCScalingRestriction(pc,z,pcis->vec1_B);CHKERRQ(ierr);
128950efa1b5SStefano Zampini   } else {
129050efa1b5SStefano Zampini     ierr = VecSet(pcis->vec1_D,zero);CHKERRQ(ierr);
129150efa1b5SStefano Zampini     ierr = VecSet(pcis->vec2_D,zero);CHKERRQ(ierr);
129250efa1b5SStefano Zampini     ierr = PCBDDCScalingRestriction(pc,r,pcis->vec1_B);CHKERRQ(ierr);
129350efa1b5SStefano Zampini   }
129450efa1b5SStefano Zampini 
129550efa1b5SStefano Zampini   /* Apply interface preconditioner
129650efa1b5SStefano Zampini      input/output vecs: pcis->vec1_B and pcis->vec1_D */
1297dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(pc,PETSC_TRUE);CHKERRQ(ierr);
129850efa1b5SStefano Zampini 
129950efa1b5SStefano Zampini   /* Apply transpose of partition of unity operator */
130050efa1b5SStefano Zampini   ierr = PCBDDCScalingExtension(pc,pcis->vec1_B,z);CHKERRQ(ierr);
130150efa1b5SStefano Zampini 
130250efa1b5SStefano Zampini   /* Second Dirichlet solve and assembling of output */
130350efa1b5SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
130450efa1b5SStefano Zampini   ierr = VecScatterEnd(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
130550efa1b5SStefano Zampini   ierr = MatMultTranspose(pcis->A_BI,pcis->vec1_B,pcis->vec3_D);CHKERRQ(ierr);
130650efa1b5SStefano Zampini   if (pcbddc->switch_static) { ierr = MatMultTransposeAdd(pcis->A_II,pcis->vec1_D,pcis->vec3_D,pcis->vec3_D);CHKERRQ(ierr); }
1307*b0147a47SStefano Zampini   ierr = KSPSolveTranspose(pcbddc->ksp_D,pcis->vec3_D,pcis->vec4_D);CHKERRQ(ierr);
1308*b0147a47SStefano Zampini   ierr = VecScale(pcis->vec4_D,m_one);CHKERRQ(ierr);
1309*b0147a47SStefano Zampini   if (pcbddc->switch_static) { ierr = VecAXPY(pcis->vec4_D,one,pcis->vec1_D);CHKERRQ(ierr); }
1310*b0147a47SStefano Zampini   ierr = VecAXPY(pcis->vec2_D,one,pcis->vec4_D);CHKERRQ(ierr);
131150efa1b5SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
131250efa1b5SStefano Zampini   ierr = VecScatterEnd(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
131350efa1b5SStefano Zampini   PetscFunctionReturn(0);
131450efa1b5SStefano Zampini }
1315da1bb401SStefano Zampini /* -------------------------------------------------------------------------- */
1316674ae819SStefano Zampini 
1317da1bb401SStefano Zampini #undef __FUNCT__
1318da1bb401SStefano Zampini #define __FUNCT__ "PCDestroy_BDDC"
1319da1bb401SStefano Zampini PetscErrorCode PCDestroy_BDDC(PC pc)
1320da1bb401SStefano Zampini {
1321da1bb401SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
1322da1bb401SStefano Zampini   PetscErrorCode ierr;
1323da1bb401SStefano Zampini 
1324da1bb401SStefano Zampini   PetscFunctionBegin;
1325da1bb401SStefano Zampini   /* free data created by PCIS */
1326da1bb401SStefano Zampini   ierr = PCISDestroy(pc);CHKERRQ(ierr);
1327674ae819SStefano Zampini   /* free BDDC custom data  */
1328674ae819SStefano Zampini   ierr = PCBDDCResetCustomization(pc);CHKERRQ(ierr);
1329674ae819SStefano Zampini   /* destroy objects related to topography */
1330674ae819SStefano Zampini   ierr = PCBDDCResetTopography(pc);CHKERRQ(ierr);
1331674ae819SStefano Zampini   /* free allocated graph structure */
1332da1bb401SStefano Zampini   ierr = PetscFree(pcbddc->mat_graph);CHKERRQ(ierr);
1333674ae819SStefano Zampini   /* free data for scaling operator */
1334674ae819SStefano Zampini   ierr = PCBDDCScalingDestroy(pc);CHKERRQ(ierr);
1335674ae819SStefano Zampini   /* free solvers stuff */
1336674ae819SStefano Zampini   ierr = PCBDDCResetSolvers(pc);CHKERRQ(ierr);
133762a6ff1dSStefano Zampini   /* free global vectors needed in presolve */
133862a6ff1dSStefano Zampini   ierr = VecDestroy(&pcbddc->temp_solution);CHKERRQ(ierr);
133962a6ff1dSStefano Zampini   ierr = VecDestroy(&pcbddc->original_rhs);CHKERRQ(ierr);
134039e2fb2aSStefano Zampini   ierr = ISLocalToGlobalMappingDestroy(&pcbddc->BtoNmap);CHKERRQ(ierr);
13413425bc38SStefano Zampini   /* remove functions */
1342674ae819SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetPrimalVerticesLocalIS_C",NULL);CHKERRQ(ierr);
1343bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetCoarseningRatio_C",NULL);CHKERRQ(ierr);
13442b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevel_C",NULL);CHKERRQ(ierr);
1345b8ffe317SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetUseExactDirichlet_C",NULL);CHKERRQ(ierr);
13462b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevels_C",NULL);CHKERRQ(ierr);
1347bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNullSpace_C",NULL);CHKERRQ(ierr);
1348bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundaries_C",NULL);CHKERRQ(ierr);
134982ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundariesLocal_C",NULL);CHKERRQ(ierr);
1350bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundaries_C",NULL);CHKERRQ(ierr);
135182ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundariesLocal_C",NULL);CHKERRQ(ierr);
1352bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundaries_C",NULL);CHKERRQ(ierr);
135382ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundariesLocal_C",NULL);CHKERRQ(ierr);
1354bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundaries_C",NULL);CHKERRQ(ierr);
1355785d1243SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundariesLocal_C",NULL);CHKERRQ(ierr);
1356bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplitting_C",NULL);CHKERRQ(ierr);
135763602bcaSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplittingLocal_C",NULL);CHKERRQ(ierr);
1358bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",NULL);CHKERRQ(ierr);
1359bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCCreateFETIDPOperators_C",NULL);CHKERRQ(ierr);
1360bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetRHS_C",NULL);CHKERRQ(ierr);
1361bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetSolution_C",NULL);CHKERRQ(ierr);
1362674ae819SStefano Zampini   /* Free the private data structure */
1363674ae819SStefano Zampini   ierr = PetscFree(pc->data);CHKERRQ(ierr);
1364da1bb401SStefano Zampini   PetscFunctionReturn(0);
1365da1bb401SStefano Zampini }
13663425bc38SStefano Zampini /* -------------------------------------------------------------------------- */
13671e6b0712SBarry Smith 
13683425bc38SStefano Zampini #undef __FUNCT__
13693425bc38SStefano Zampini #define __FUNCT__ "PCBDDCMatFETIDPGetRHS_BDDC"
13703425bc38SStefano Zampini static PetscErrorCode PCBDDCMatFETIDPGetRHS_BDDC(Mat fetidp_mat, Vec standard_rhs, Vec fetidp_flux_rhs)
13713425bc38SStefano Zampini {
1372674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
13733425bc38SStefano Zampini   PC_IS*         pcis;
13743425bc38SStefano Zampini   PC_BDDC*       pcbddc;
13753425bc38SStefano Zampini   PetscErrorCode ierr;
13760c7d97c5SJed Brown 
13773425bc38SStefano Zampini   PetscFunctionBegin;
13783425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
13793425bc38SStefano Zampini   pcis = (PC_IS*)mat_ctx->pc->data;
13803425bc38SStefano Zampini   pcbddc = (PC_BDDC*)mat_ctx->pc->data;
13813425bc38SStefano Zampini 
13823425bc38SStefano Zampini   /* change of basis for physical rhs if needed
13833425bc38SStefano Zampini      It also changes the rhs in case of dirichlet boundaries */
13843308cffdSStefano Zampini   ierr = PCPreSolve_BDDC(mat_ctx->pc,NULL,standard_rhs,NULL);CHKERRQ(ierr);
13853425bc38SStefano Zampini   /* store vectors for computation of fetidp final solution */
13863425bc38SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_D,standard_rhs,mat_ctx->temp_solution_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
13873425bc38SStefano Zampini   ierr = VecScatterEnd(pcis->global_to_D,standard_rhs,mat_ctx->temp_solution_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1388fb223d50SStefano Zampini   /* scale rhs since it should be unassembled */
1389fb223d50SStefano Zampini   /* TODO use counter scaling? (also below) */
13903425bc38SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_B,standard_rhs,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
13913425bc38SStefano Zampini   ierr = VecScatterEnd(pcis->global_to_B,standard_rhs,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1392674ae819SStefano Zampini   /* Apply partition of unity */
13933425bc38SStefano Zampini   ierr = VecPointwiseMult(mat_ctx->temp_solution_B,pcis->D,mat_ctx->temp_solution_B);CHKERRQ(ierr);
1394674ae819SStefano Zampini   /* ierr = PCBDDCScalingRestriction(mat_ctx->pc,standard_rhs,mat_ctx->temp_solution_B);CHKERRQ(ierr); */
13958eeda7d8SStefano Zampini   if (!pcbddc->switch_static) {
13963425bc38SStefano Zampini     /* compute partially subassembled Schur complement right-hand side */
13973425bc38SStefano Zampini     ierr = KSPSolve(pcbddc->ksp_D,mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr);
13983425bc38SStefano Zampini     ierr = MatMult(pcis->A_BI,pcis->vec1_D,pcis->vec1_B);CHKERRQ(ierr);
13993425bc38SStefano Zampini     ierr = VecAXPY(mat_ctx->temp_solution_B,-1.0,pcis->vec1_B);CHKERRQ(ierr);
14003425bc38SStefano Zampini     ierr = VecSet(standard_rhs,0.0);CHKERRQ(ierr);
14013425bc38SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,mat_ctx->temp_solution_B,standard_rhs,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14023425bc38SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_B,mat_ctx->temp_solution_B,standard_rhs,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1403674ae819SStefano Zampini     /* ierr = PCBDDCScalingRestriction(mat_ctx->pc,standard_rhs,mat_ctx->temp_solution_B);CHKERRQ(ierr); */
14043425bc38SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,standard_rhs,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
14053425bc38SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_B,standard_rhs,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
14063425bc38SStefano Zampini     ierr = VecPointwiseMult(mat_ctx->temp_solution_B,pcis->D,mat_ctx->temp_solution_B);CHKERRQ(ierr);
14073425bc38SStefano Zampini   }
14083425bc38SStefano Zampini   /* BDDC rhs */
14093425bc38SStefano Zampini   ierr = VecCopy(mat_ctx->temp_solution_B,pcis->vec1_B);CHKERRQ(ierr);
14108eeda7d8SStefano Zampini   if (pcbddc->switch_static) {
14113425bc38SStefano Zampini     ierr = VecCopy(mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr);
14123425bc38SStefano Zampini   }
14133425bc38SStefano Zampini   /* apply BDDC */
1414dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(mat_ctx->pc,PETSC_FALSE);CHKERRQ(ierr);
14153425bc38SStefano Zampini   /* Application of B_delta and assembling of rhs for fetidp fluxes */
14163425bc38SStefano Zampini   ierr = VecSet(fetidp_flux_rhs,0.0);CHKERRQ(ierr);
14173425bc38SStefano Zampini   ierr = MatMult(mat_ctx->B_delta,pcis->vec1_B,mat_ctx->lambda_local);CHKERRQ(ierr);
14183425bc38SStefano Zampini   ierr = VecScatterBegin(mat_ctx->l2g_lambda,mat_ctx->lambda_local,fetidp_flux_rhs,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
14193425bc38SStefano Zampini   ierr = VecScatterEnd  (mat_ctx->l2g_lambda,mat_ctx->lambda_local,fetidp_flux_rhs,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
14203425bc38SStefano Zampini   /* restore original rhs */
14213425bc38SStefano Zampini   ierr = VecCopy(pcbddc->original_rhs,standard_rhs);CHKERRQ(ierr);
14223425bc38SStefano Zampini   PetscFunctionReturn(0);
14233425bc38SStefano Zampini }
14241e6b0712SBarry Smith 
14253425bc38SStefano Zampini #undef __FUNCT__
14263425bc38SStefano Zampini #define __FUNCT__ "PCBDDCMatFETIDPGetRHS"
14273425bc38SStefano Zampini /*@
142828509bceSStefano Zampini  PCBDDCMatFETIDPGetRHS - Compute the right-hand side for FETIDP linear system
14293425bc38SStefano Zampini 
14303425bc38SStefano Zampini    Collective
14313425bc38SStefano Zampini 
14323425bc38SStefano Zampini    Input Parameters:
143328509bceSStefano Zampini +  fetidp_mat   - the FETIDP matrix object obtained by calling PCBDDCCreateFETIDPOperators
143428509bceSStefano Zampini .  standard_rhs - the right-hand side for your linear system
14353425bc38SStefano Zampini 
14363425bc38SStefano Zampini    Output Parameters:
143728509bceSStefano Zampini -  fetidp_flux_rhs   - the right-hand side for the FETIDP linear system
14383425bc38SStefano Zampini 
14393425bc38SStefano Zampini    Level: developer
14403425bc38SStefano Zampini 
14413425bc38SStefano Zampini    Notes:
14423425bc38SStefano Zampini 
144328509bceSStefano Zampini .seealso: PCBDDC,PCBDDCCreateFETIDPOperators
14443425bc38SStefano Zampini @*/
14453425bc38SStefano Zampini PetscErrorCode PCBDDCMatFETIDPGetRHS(Mat fetidp_mat, Vec standard_rhs, Vec fetidp_flux_rhs)
14463425bc38SStefano Zampini {
1447674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
14483425bc38SStefano Zampini   PetscErrorCode ierr;
14493425bc38SStefano Zampini 
14503425bc38SStefano Zampini   PetscFunctionBegin;
14513425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
14523425bc38SStefano Zampini   ierr = PetscTryMethod(mat_ctx->pc,"PCBDDCMatFETIDPGetRHS_C",(Mat,Vec,Vec),(fetidp_mat,standard_rhs,fetidp_flux_rhs));CHKERRQ(ierr);
14533425bc38SStefano Zampini   PetscFunctionReturn(0);
14543425bc38SStefano Zampini }
14553425bc38SStefano Zampini /* -------------------------------------------------------------------------- */
14561e6b0712SBarry Smith 
14573425bc38SStefano Zampini #undef __FUNCT__
14583425bc38SStefano Zampini #define __FUNCT__ "PCBDDCMatFETIDPGetSolution_BDDC"
14593425bc38SStefano Zampini static PetscErrorCode PCBDDCMatFETIDPGetSolution_BDDC(Mat fetidp_mat, Vec fetidp_flux_sol, Vec standard_sol)
14603425bc38SStefano Zampini {
1461674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
14623425bc38SStefano Zampini   PC_IS*         pcis;
14633425bc38SStefano Zampini   PC_BDDC*       pcbddc;
14643425bc38SStefano Zampini   PetscErrorCode ierr;
14653425bc38SStefano Zampini 
14663425bc38SStefano Zampini   PetscFunctionBegin;
14673425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
14683425bc38SStefano Zampini   pcis = (PC_IS*)mat_ctx->pc->data;
14693425bc38SStefano Zampini   pcbddc = (PC_BDDC*)mat_ctx->pc->data;
14703425bc38SStefano Zampini 
14713425bc38SStefano Zampini   /* apply B_delta^T */
14723425bc38SStefano Zampini   ierr = VecScatterBegin(mat_ctx->l2g_lambda,fetidp_flux_sol,mat_ctx->lambda_local,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14733425bc38SStefano Zampini   ierr = VecScatterEnd  (mat_ctx->l2g_lambda,fetidp_flux_sol,mat_ctx->lambda_local,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14743425bc38SStefano Zampini   ierr = MatMultTranspose(mat_ctx->B_delta,mat_ctx->lambda_local,pcis->vec1_B);CHKERRQ(ierr);
14753425bc38SStefano Zampini   /* compute rhs for BDDC application */
14763425bc38SStefano Zampini   ierr = VecAYPX(pcis->vec1_B,-1.0,mat_ctx->temp_solution_B);CHKERRQ(ierr);
14778eeda7d8SStefano Zampini   if (pcbddc->switch_static) {
14783425bc38SStefano Zampini     ierr = VecCopy(mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr);
14793425bc38SStefano Zampini   }
14803425bc38SStefano Zampini   /* apply BDDC */
1481dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(mat_ctx->pc,PETSC_FALSE);CHKERRQ(ierr);
14823425bc38SStefano Zampini   /* put values into standard global vector */
14833425bc38SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14843425bc38SStefano Zampini   ierr = VecScatterEnd  (pcis->global_to_B,pcis->vec1_B,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14858eeda7d8SStefano Zampini   if (!pcbddc->switch_static) {
14863425bc38SStefano Zampini     /* compute values into the interior if solved for the partially subassembled Schur complement */
14873425bc38SStefano Zampini     ierr = MatMult(pcis->A_IB,pcis->vec1_B,pcis->vec1_D);CHKERRQ(ierr);
14883425bc38SStefano Zampini     ierr = VecAXPY(mat_ctx->temp_solution_D,-1.0,pcis->vec1_D);CHKERRQ(ierr);
14893425bc38SStefano Zampini     ierr = KSPSolve(pcbddc->ksp_D,mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr);
14903425bc38SStefano Zampini   }
14913425bc38SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_D,pcis->vec1_D,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14923425bc38SStefano Zampini   ierr = VecScatterEnd  (pcis->global_to_D,pcis->vec1_D,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14933425bc38SStefano Zampini   /* final change of basis if needed
14943425bc38SStefano Zampini      Is also sums the dirichlet part removed during RHS assembling */
14953308cffdSStefano Zampini   ierr = PCPostSolve_BDDC(mat_ctx->pc,NULL,NULL,standard_sol);CHKERRQ(ierr);
14963425bc38SStefano Zampini   PetscFunctionReturn(0);
14973425bc38SStefano Zampini }
14981e6b0712SBarry Smith 
14993425bc38SStefano Zampini #undef __FUNCT__
15003425bc38SStefano Zampini #define __FUNCT__ "PCBDDCMatFETIDPGetSolution"
15013425bc38SStefano Zampini /*@
150228509bceSStefano Zampini  PCBDDCMatFETIDPGetSolution - Compute the physical solution from the solution of the FETIDP linear system
15033425bc38SStefano Zampini 
15043425bc38SStefano Zampini    Collective
15053425bc38SStefano Zampini 
15063425bc38SStefano Zampini    Input Parameters:
150728509bceSStefano Zampini +  fetidp_mat        - the FETIDP matrix obtained by calling PCBDDCCreateFETIDPOperators
150828509bceSStefano Zampini .  fetidp_flux_sol - the solution of the FETIDP linear system
15093425bc38SStefano Zampini 
15103425bc38SStefano Zampini    Output Parameters:
151128509bceSStefano Zampini -  standard_sol      - the solution defined on the physical domain
15123425bc38SStefano Zampini 
15133425bc38SStefano Zampini    Level: developer
15143425bc38SStefano Zampini 
15153425bc38SStefano Zampini    Notes:
15163425bc38SStefano Zampini 
151728509bceSStefano Zampini .seealso: PCBDDC,PCBDDCCreateFETIDPOperators
15183425bc38SStefano Zampini @*/
15193425bc38SStefano Zampini PetscErrorCode PCBDDCMatFETIDPGetSolution(Mat fetidp_mat, Vec fetidp_flux_sol, Vec standard_sol)
15203425bc38SStefano Zampini {
1521674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
15223425bc38SStefano Zampini   PetscErrorCode ierr;
15233425bc38SStefano Zampini 
15243425bc38SStefano Zampini   PetscFunctionBegin;
15253425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
15263425bc38SStefano Zampini   ierr = PetscTryMethod(mat_ctx->pc,"PCBDDCMatFETIDPGetSolution_C",(Mat,Vec,Vec),(fetidp_mat,fetidp_flux_sol,standard_sol));CHKERRQ(ierr);
15273425bc38SStefano Zampini   PetscFunctionReturn(0);
15283425bc38SStefano Zampini }
15293425bc38SStefano Zampini /* -------------------------------------------------------------------------- */
15301e6b0712SBarry Smith 
1531f23aa3ddSBarry Smith extern PetscErrorCode FETIDPMatMult(Mat,Vec,Vec);
1532edf7251bSStefano Zampini extern PetscErrorCode FETIDPMatMultTranspose(Mat,Vec,Vec);
1533f23aa3ddSBarry Smith extern PetscErrorCode PCBDDCDestroyFETIDPMat(Mat);
1534f23aa3ddSBarry Smith extern PetscErrorCode FETIDPPCApply(PC,Vec,Vec);
1535edf7251bSStefano Zampini extern PetscErrorCode FETIDPPCApplyTranspose(PC,Vec,Vec);
1536f23aa3ddSBarry Smith extern PetscErrorCode PCBDDCDestroyFETIDPPC(PC);
1537674ae819SStefano Zampini 
15383425bc38SStefano Zampini #undef __FUNCT__
15393425bc38SStefano Zampini #define __FUNCT__ "PCBDDCCreateFETIDPOperators_BDDC"
15403425bc38SStefano Zampini static PetscErrorCode PCBDDCCreateFETIDPOperators_BDDC(PC pc, Mat *fetidp_mat, PC *fetidp_pc)
15413425bc38SStefano Zampini {
1542674ae819SStefano Zampini 
1543674ae819SStefano Zampini   FETIDPMat_ctx  fetidpmat_ctx;
15443425bc38SStefano Zampini   Mat            newmat;
1545674ae819SStefano Zampini   FETIDPPC_ctx   fetidppc_ctx;
15463425bc38SStefano Zampini   PC             newpc;
1547ce94432eSBarry Smith   MPI_Comm       comm;
15483425bc38SStefano Zampini   PetscErrorCode ierr;
15493425bc38SStefano Zampini 
15503425bc38SStefano Zampini   PetscFunctionBegin;
1551ce94432eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr);
15523425bc38SStefano Zampini   /* FETIDP linear matrix */
15533425bc38SStefano Zampini   ierr = PCBDDCCreateFETIDPMatContext(pc,&fetidpmat_ctx);CHKERRQ(ierr);
15543425bc38SStefano Zampini   ierr = PCBDDCSetupFETIDPMatContext(fetidpmat_ctx);CHKERRQ(ierr);
15553425bc38SStefano Zampini   ierr = MatCreateShell(comm,PETSC_DECIDE,PETSC_DECIDE,fetidpmat_ctx->n_lambda,fetidpmat_ctx->n_lambda,fetidpmat_ctx,&newmat);CHKERRQ(ierr);
15563425bc38SStefano Zampini   ierr = MatShellSetOperation(newmat,MATOP_MULT,(void (*)(void))FETIDPMatMult);CHKERRQ(ierr);
1557edf7251bSStefano Zampini   ierr = MatShellSetOperation(newmat,MATOP_MULT_TRANSPOSE,(void (*)(void))FETIDPMatMultTranspose);CHKERRQ(ierr);
15583425bc38SStefano Zampini   ierr = MatShellSetOperation(newmat,MATOP_DESTROY,(void (*)(void))PCBDDCDestroyFETIDPMat);CHKERRQ(ierr);
15593425bc38SStefano Zampini   ierr = MatSetUp(newmat);CHKERRQ(ierr);
15603425bc38SStefano Zampini   /* FETIDP preconditioner */
15613425bc38SStefano Zampini   ierr = PCBDDCCreateFETIDPPCContext(pc,&fetidppc_ctx);CHKERRQ(ierr);
15623425bc38SStefano Zampini   ierr = PCBDDCSetupFETIDPPCContext(newmat,fetidppc_ctx);CHKERRQ(ierr);
15633425bc38SStefano Zampini   ierr = PCCreate(comm,&newpc);CHKERRQ(ierr);
15643425bc38SStefano Zampini   ierr = PCSetType(newpc,PCSHELL);CHKERRQ(ierr);
15653425bc38SStefano Zampini   ierr = PCShellSetContext(newpc,fetidppc_ctx);CHKERRQ(ierr);
15663425bc38SStefano Zampini   ierr = PCShellSetApply(newpc,FETIDPPCApply);CHKERRQ(ierr);
1567edf7251bSStefano Zampini   ierr = PCShellSetApplyTranspose(newpc,FETIDPPCApplyTranspose);CHKERRQ(ierr);
15683425bc38SStefano Zampini   ierr = PCShellSetDestroy(newpc,PCBDDCDestroyFETIDPPC);CHKERRQ(ierr);
15693425bc38SStefano Zampini   ierr = PCSetOperators(newpc,newmat,newmat,SAME_PRECONDITIONER);CHKERRQ(ierr);
15703425bc38SStefano Zampini   ierr = PCSetUp(newpc);CHKERRQ(ierr);
15713425bc38SStefano Zampini   /* return pointers for objects created */
15723425bc38SStefano Zampini   *fetidp_mat=newmat;
15733425bc38SStefano Zampini   *fetidp_pc=newpc;
15743425bc38SStefano Zampini   PetscFunctionReturn(0);
15753425bc38SStefano Zampini }
15761e6b0712SBarry Smith 
15773425bc38SStefano Zampini #undef __FUNCT__
15783425bc38SStefano Zampini #define __FUNCT__ "PCBDDCCreateFETIDPOperators"
15793425bc38SStefano Zampini /*@
158028509bceSStefano Zampini  PCBDDCCreateFETIDPOperators - Create operators for FETIDP
15813425bc38SStefano Zampini 
15823425bc38SStefano Zampini    Collective
15833425bc38SStefano Zampini 
15843425bc38SStefano Zampini    Input Parameters:
158528509bceSStefano Zampini +  pc - the BDDC preconditioning context already setup
158628509bceSStefano Zampini 
158728509bceSStefano Zampini    Output Parameters:
158828509bceSStefano Zampini .  fetidp_mat - shell FETIDP matrix object
158928509bceSStefano Zampini .  fetidp_pc  - shell Dirichlet preconditioner for FETIDP matrix
159028509bceSStefano Zampini 
159128509bceSStefano Zampini    Options Database Keys:
159228509bceSStefano Zampini -    -fetidp_fullyredundant: use or not a fully redundant set of Lagrange multipliers
15933425bc38SStefano Zampini 
15943425bc38SStefano Zampini    Level: developer
15953425bc38SStefano Zampini 
15963425bc38SStefano Zampini    Notes:
159728509bceSStefano Zampini      Currently the only operation provided for FETIDP matrix is MatMult
15983425bc38SStefano Zampini 
15993425bc38SStefano Zampini .seealso: PCBDDC
16003425bc38SStefano Zampini @*/
16013425bc38SStefano Zampini PetscErrorCode PCBDDCCreateFETIDPOperators(PC pc, Mat *fetidp_mat, PC *fetidp_pc)
16023425bc38SStefano Zampini {
16033425bc38SStefano Zampini   PetscErrorCode ierr;
16043425bc38SStefano Zampini 
16053425bc38SStefano Zampini   PetscFunctionBegin;
16063425bc38SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
16073425bc38SStefano Zampini   if (pc->setupcalled) {
1608516d51a7SStefano Zampini     ierr = PetscUseMethod(pc,"PCBDDCCreateFETIDPOperators_C",(PC,Mat*,PC*),(pc,fetidp_mat,fetidp_pc));CHKERRQ(ierr);
1609f23aa3ddSBarry Smith   } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"You must call PCSetup_BDDC() first \n");
16103425bc38SStefano Zampini   PetscFunctionReturn(0);
16113425bc38SStefano Zampini }
16120c7d97c5SJed Brown /* -------------------------------------------------------------------------- */
1613da1bb401SStefano Zampini /*MC
1614da1bb401SStefano Zampini    PCBDDC - Balancing Domain Decomposition by Constraints.
16150c7d97c5SJed Brown 
161628509bceSStefano Zampini    An implementation of the BDDC preconditioner based on
161728509bceSStefano Zampini 
161828509bceSStefano Zampini .vb
161928509bceSStefano Zampini    [1] C. R. Dohrmann. "An approximate BDDC preconditioner", Numerical Linear Algebra with Applications Volume 14, Issue 2, pages 149-168, March 2007
162028509bceSStefano Zampini    [2] A. Klawonn and O. B. Widlund. "Dual-Primal FETI Methods for Linear Elasticity", http://cs.nyu.edu/csweb/Research/TechReports/TR2004-855/TR2004-855.pdf
162128509bceSStefano Zampini    [3] J. Mandel, B. Sousedik, C. R. Dohrmann. "Multispace and Multilevel BDDC", http://arxiv.org/abs/0712.3977
162228509bceSStefano Zampini .ve
162328509bceSStefano Zampini 
162428509bceSStefano Zampini    The matrix to be preconditioned (Pmat) must be of type MATIS.
162528509bceSStefano Zampini 
1626b6fdb6dfSStefano Zampini    Currently works with MATIS matrices with local Neumann matrices of type MATSEQAIJ, MATSEQBAIJ or MATSEQSBAIJ, either with real or complex numbers.
162728509bceSStefano Zampini 
162828509bceSStefano Zampini    It also works with unsymmetric and indefinite problems.
162928509bceSStefano Zampini 
1630b6fdb6dfSStefano Zampini    Unlike 'conventional' interface preconditioners, PCBDDC iterates over all degrees of freedom, not just those on the interface. This allows the use of approximate solvers on the subdomains.
1631b6fdb6dfSStefano Zampini 
163228509bceSStefano Zampini    Approximate local solvers are automatically adapted for singular linear problems (see [1]) if the user has provided the nullspace using PCBDDCSetNullSpace
163328509bceSStefano Zampini 
163428509bceSStefano Zampini    Boundary nodes are split in vertices, edges and faces using information from the local to global mapping of dofs and the local connectivity graph of nodes. The latter can be customized by using PCBDDCSetLocalAdjacencyGraph
163528509bceSStefano Zampini 
163628509bceSStefano Zampini    Constraints can be customized by attaching a MatNullSpace object to the MATIS matrix via MatSetNearNullSpace.
163728509bceSStefano Zampini 
1638b6fdb6dfSStefano Zampini    Change of basis is performed similarly to [2] when requested. When more the one constraint is present on a single connected component (i.e. an edge or a face), a robust method based on local QR factorizations is used.
163928509bceSStefano Zampini 
164028509bceSStefano Zampini    The PETSc implementation also supports multilevel BDDC [3]. Coarse grids are partitioned using MatPartitioning object.
164128509bceSStefano Zampini 
1642da1bb401SStefano Zampini    Options Database Keys:
164328509bceSStefano Zampini 
164428509bceSStefano Zampini .    -pc_bddc_use_vertices <1> - use or not vertices in primal space
164528509bceSStefano Zampini .    -pc_bddc_use_edges <1> - use or not edges in primal space
1646b6fdb6dfSStefano Zampini .    -pc_bddc_use_faces <0> - use or not faces in primal space
164728509bceSStefano Zampini .    -pc_bddc_use_change_of_basis <0> - use change of basis approach (on edges only)
164828509bceSStefano Zampini .    -pc_bddc_use_change_on_faces <0> - use change of basis approach on faces if change of basis has been requested
164928509bceSStefano Zampini .    -pc_bddc_switch_static <0> - switches from M_2 to M_3 operator (see reference article [1])
165028509bceSStefano Zampini .    -pc_bddc_levels <0> - maximum number of levels for multilevel
165128509bceSStefano Zampini .    -pc_bddc_coarsening_ratio - H/h ratio at the coarser level
165228509bceSStefano Zampini -    -pc_bddc_check_level <0> - set verbosity level of debugging output
165328509bceSStefano Zampini 
165428509bceSStefano Zampini    Options for Dirichlet, Neumann or coarse solver can be set with
165528509bceSStefano Zampini .vb
165628509bceSStefano Zampini       -pc_bddc_dirichlet_
165728509bceSStefano Zampini       -pc_bddc_neumann_
165828509bceSStefano Zampini       -pc_bddc_coarse_
165928509bceSStefano Zampini .ve
166028509bceSStefano Zampini    e.g -pc_bddc_dirichlet_ksp_type richardson -pc_bddc_dirichlet_pc_type gamg
166128509bceSStefano Zampini 
166228509bceSStefano Zampini    When using a multilevel approach, solvers' options at the N-th level can be specified as
166328509bceSStefano Zampini .vb
166428509bceSStefano Zampini       -pc_bddc_dirichlet_N_
166528509bceSStefano Zampini       -pc_bddc_neumann_N_
166628509bceSStefano Zampini       -pc_bddc_coarse_N_
166728509bceSStefano Zampini .ve
166828509bceSStefano Zampini    Note that level number ranges from the finest 0 to the coarsest N
1669da1bb401SStefano Zampini 
1670da1bb401SStefano Zampini    Level: intermediate
1671da1bb401SStefano Zampini 
1672b6fdb6dfSStefano Zampini    Developer notes:
1673da1bb401SStefano Zampini 
167428509bceSStefano Zampini    New deluxe scaling operator will be available soon.
1675da1bb401SStefano Zampini 
1676da1bb401SStefano Zampini    Contributed by Stefano Zampini
1677da1bb401SStefano Zampini 
1678da1bb401SStefano Zampini .seealso:  PCCreate(), PCSetType(), PCType (for list of available types), PC,  MATIS
1679da1bb401SStefano Zampini M*/
1680b2573a8aSBarry Smith 
1681da1bb401SStefano Zampini #undef __FUNCT__
1682da1bb401SStefano Zampini #define __FUNCT__ "PCCreate_BDDC"
16838cc058d9SJed Brown PETSC_EXTERN PetscErrorCode PCCreate_BDDC(PC pc)
1684da1bb401SStefano Zampini {
1685da1bb401SStefano Zampini   PetscErrorCode      ierr;
1686da1bb401SStefano Zampini   PC_BDDC             *pcbddc;
1687da1bb401SStefano Zampini 
1688da1bb401SStefano Zampini   PetscFunctionBegin;
1689da1bb401SStefano Zampini   /* Creates the private data structure for this preconditioner and attach it to the PC object. */
1690da1bb401SStefano Zampini   ierr      = PetscNewLog(pc,PC_BDDC,&pcbddc);CHKERRQ(ierr);
1691da1bb401SStefano Zampini   pc->data  = (void*)pcbddc;
1692da1bb401SStefano Zampini 
1693da1bb401SStefano Zampini   /* create PCIS data structure */
1694da1bb401SStefano Zampini   ierr = PCISCreate(pc);CHKERRQ(ierr);
1695da1bb401SStefano Zampini 
169647d04d0dSStefano Zampini   /* BDDC customization */
169747d04d0dSStefano Zampini   pcbddc->use_vertices        = PETSC_TRUE;
169847d04d0dSStefano Zampini   pcbddc->use_edges           = PETSC_TRUE;
169947d04d0dSStefano Zampini   pcbddc->use_faces           = PETSC_FALSE;
170047d04d0dSStefano Zampini   pcbddc->use_change_of_basis = PETSC_FALSE;
170147d04d0dSStefano Zampini   pcbddc->use_change_on_faces = PETSC_FALSE;
170247d04d0dSStefano Zampini   pcbddc->switch_static       = PETSC_FALSE;
170347d04d0dSStefano Zampini   pcbddc->use_nnsp_true       = PETSC_FALSE; /* not yet exposed */
170447d04d0dSStefano Zampini   pcbddc->dbg_flag            = 0;
170547d04d0dSStefano Zampini 
170639e2fb2aSStefano Zampini   pcbddc->BtoNmap                    = 0;
1707727cdba6SStefano Zampini   pcbddc->local_primal_size          = 0;
1708e9189074SStefano Zampini   pcbddc->n_vertices                 = 0;
1709e9189074SStefano Zampini   pcbddc->n_actual_vertices          = 0;
1710e9189074SStefano Zampini   pcbddc->n_constraints              = 0;
1711727cdba6SStefano Zampini   pcbddc->primal_indices_local_idxs  = 0;
1712fb180af4SStefano Zampini   pcbddc->recompute_topography       = PETSC_FALSE;
1713f4ddd8eeSStefano Zampini   pcbddc->coarse_size                = 0;
1714f4ddd8eeSStefano Zampini   pcbddc->new_primal_space           = PETSC_FALSE;
1715727cdba6SStefano Zampini   pcbddc->new_primal_space_local     = PETSC_FALSE;
1716f4ddd8eeSStefano Zampini   pcbddc->global_primal_indices      = 0;
1717f4ddd8eeSStefano Zampini   pcbddc->onearnullspace             = 0;
1718f4ddd8eeSStefano Zampini   pcbddc->onearnullvecs_state        = 0;
1719674ae819SStefano Zampini   pcbddc->user_primal_vertices       = 0;
17200bdf917eSStefano Zampini   pcbddc->NullSpace                  = 0;
17213972b0daSStefano Zampini   pcbddc->temp_solution              = 0;
1722534831adSStefano Zampini   pcbddc->original_rhs               = 0;
1723534831adSStefano Zampini   pcbddc->local_mat                  = 0;
1724534831adSStefano Zampini   pcbddc->ChangeOfBasisMatrix        = 0;
1725da1bb401SStefano Zampini   pcbddc->coarse_vec                 = 0;
1726da1bb401SStefano Zampini   pcbddc->coarse_rhs                 = 0;
1727da1bb401SStefano Zampini   pcbddc->coarse_ksp                 = 0;
1728da1bb401SStefano Zampini   pcbddc->coarse_phi_B               = 0;
1729da1bb401SStefano Zampini   pcbddc->coarse_phi_D               = 0;
173015aaf578SStefano Zampini   pcbddc->coarse_psi_B               = 0;
173115aaf578SStefano Zampini   pcbddc->coarse_psi_D               = 0;
1732da1bb401SStefano Zampini   pcbddc->vec1_P                     = 0;
1733da1bb401SStefano Zampini   pcbddc->vec1_R                     = 0;
1734da1bb401SStefano Zampini   pcbddc->vec2_R                     = 0;
1735da1bb401SStefano Zampini   pcbddc->local_auxmat1              = 0;
1736da1bb401SStefano Zampini   pcbddc->local_auxmat2              = 0;
1737da1bb401SStefano Zampini   pcbddc->R_to_B                     = 0;
1738da1bb401SStefano Zampini   pcbddc->R_to_D                     = 0;
1739da1bb401SStefano Zampini   pcbddc->ksp_D                      = 0;
1740da1bb401SStefano Zampini   pcbddc->ksp_R                      = 0;
1741da1bb401SStefano Zampini   pcbddc->NeumannBoundaries          = 0;
1742785d1243SStefano Zampini   pcbddc->NeumannBoundariesLocal     = 0;
1743785d1243SStefano Zampini   pcbddc->DirichletBoundaries        = 0;
1744785d1243SStefano Zampini   pcbddc->DirichletBoundariesLocal   = 0;
174560d44989SStefano Zampini   pcbddc->user_provided_isfordofs    = PETSC_FALSE;
174660d44989SStefano Zampini   pcbddc->n_ISForDofs                = 0;
174763602bcaSStefano Zampini   pcbddc->n_ISForDofsLocal           = 0;
1748da1bb401SStefano Zampini   pcbddc->ISForDofs                  = 0;
174963602bcaSStefano Zampini   pcbddc->ISForDofsLocal             = 0;
1750da1bb401SStefano Zampini   pcbddc->ConstraintMatrix           = 0;
175185c4d303SStefano Zampini   pcbddc->use_exact_dirichlet_trick  = PETSC_TRUE;
175247d04d0dSStefano Zampini   pcbddc->coarse_loc_to_glob         = 0;
175347d04d0dSStefano Zampini   pcbddc->coarsening_ratio           = 8;
17544fad6a16SStefano Zampini   pcbddc->current_level              = 0;
17552b510759SStefano Zampini   pcbddc->max_levels                 = 0;
1756da1bb401SStefano Zampini 
1757674ae819SStefano Zampini   /* create local graph structure */
1758674ae819SStefano Zampini   ierr = PCBDDCGraphCreate(&pcbddc->mat_graph);CHKERRQ(ierr);
1759674ae819SStefano Zampini 
1760674ae819SStefano Zampini   /* scaling */
1761674ae819SStefano Zampini   pcbddc->use_deluxe_scaling         = PETSC_FALSE;
1762674ae819SStefano Zampini   pcbddc->work_scaling               = 0;
1763da1bb401SStefano Zampini 
1764da1bb401SStefano Zampini   /* function pointers */
1765da1bb401SStefano Zampini   pc->ops->apply               = PCApply_BDDC;
176693bd9ae7SStefano Zampini   pc->ops->applytranspose      = PCApplyTranspose_BDDC;
1767da1bb401SStefano Zampini   pc->ops->setup               = PCSetUp_BDDC;
1768da1bb401SStefano Zampini   pc->ops->destroy             = PCDestroy_BDDC;
1769da1bb401SStefano Zampini   pc->ops->setfromoptions      = PCSetFromOptions_BDDC;
1770da1bb401SStefano Zampini   pc->ops->view                = 0;
1771da1bb401SStefano Zampini   pc->ops->applyrichardson     = 0;
1772da1bb401SStefano Zampini   pc->ops->applysymmetricleft  = 0;
1773da1bb401SStefano Zampini   pc->ops->applysymmetricright = 0;
1774534831adSStefano Zampini   pc->ops->presolve            = PCPreSolve_BDDC;
1775534831adSStefano Zampini   pc->ops->postsolve           = PCPostSolve_BDDC;
1776da1bb401SStefano Zampini 
1777da1bb401SStefano Zampini   /* composing function */
1778674ae819SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetPrimalVerticesLocalIS_C",PCBDDCSetPrimalVerticesLocalIS_BDDC);CHKERRQ(ierr);
1779bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetCoarseningRatio_C",PCBDDCSetCoarseningRatio_BDDC);CHKERRQ(ierr);
17802b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevel_C",PCBDDCSetLevel_BDDC);CHKERRQ(ierr);
1781b8ffe317SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetUseExactDirichlet_C",PCBDDCSetUseExactDirichlet_BDDC);CHKERRQ(ierr);
17822b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevels_C",PCBDDCSetLevels_BDDC);CHKERRQ(ierr);
1783bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNullSpace_C",PCBDDCSetNullSpace_BDDC);CHKERRQ(ierr);
1784bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundaries_C",PCBDDCSetDirichletBoundaries_BDDC);CHKERRQ(ierr);
178582ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundariesLocal_C",PCBDDCSetDirichletBoundariesLocal_BDDC);CHKERRQ(ierr);
1786bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundaries_C",PCBDDCSetNeumannBoundaries_BDDC);CHKERRQ(ierr);
178782ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundariesLocal_C",PCBDDCSetNeumannBoundariesLocal_BDDC);CHKERRQ(ierr);
1788bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundaries_C",PCBDDCGetDirichletBoundaries_BDDC);CHKERRQ(ierr);
178982ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundariesLocal_C",PCBDDCGetDirichletBoundariesLocal_BDDC);CHKERRQ(ierr);
1790bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundaries_C",PCBDDCGetNeumannBoundaries_BDDC);CHKERRQ(ierr);
179182ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundariesLocal_C",PCBDDCGetNeumannBoundariesLocal_BDDC);CHKERRQ(ierr);
1792bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplitting_C",PCBDDCSetDofsSplitting_BDDC);CHKERRQ(ierr);
179363602bcaSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplittingLocal_C",PCBDDCSetDofsSplittingLocal_BDDC);CHKERRQ(ierr);
1794bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",PCBDDCSetLocalAdjacencyGraph_BDDC);CHKERRQ(ierr);
1795bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCCreateFETIDPOperators_C",PCBDDCCreateFETIDPOperators_BDDC);CHKERRQ(ierr);
1796bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetRHS_C",PCBDDCMatFETIDPGetRHS_BDDC);CHKERRQ(ierr);
1797bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetSolution_C",PCBDDCMatFETIDPGetSolution_BDDC);CHKERRQ(ierr);
1798da1bb401SStefano Zampini   PetscFunctionReturn(0);
1799da1bb401SStefano Zampini }
18003425bc38SStefano Zampini 
1801