xref: /petsc/src/ksp/pc/impls/bddc/bddc.c (revision d16cbb6be50c6fdfaba2b8af3cfb2aacd3e90c10)
153cdbc3dSStefano Zampini /* TODOLIST
2eb97c9d2SStefano Zampini 
3eb97c9d2SStefano Zampini    Solvers
4a0d3c3abSStefano Zampini    - Add support for cholesky for coarse solver (similar to local solvers)
5eb97c9d2SStefano Zampini    - Propagate ksp prefixes for solvers to mat objects?
6eb97c9d2SStefano Zampini 
7eb97c9d2SStefano Zampini    User interface
80f202f7eSStefano Zampini    - ** DM attached to pc?
9eb97c9d2SStefano Zampini 
10eb97c9d2SStefano Zampini    Debugging output
11b9b85e73SStefano Zampini    - * Better management of verbosity levels of debugging output
12eb97c9d2SStefano Zampini 
13eb97c9d2SStefano Zampini    Extra
14b9b85e73SStefano Zampini    - *** Is it possible to work with PCBDDCGraph on boundary indices only (less memory consumed)?
15eb97c9d2SStefano Zampini    - BDDC with MG framework?
16eb97c9d2SStefano Zampini 
17eb97c9d2SStefano Zampini    FETIDP
18eb97c9d2SStefano Zampini    - Move FETIDP code to its own classes
19eb97c9d2SStefano Zampini 
20eb97c9d2SStefano Zampini    MATIS related operations contained in BDDC code
21eb97c9d2SStefano Zampini    - Provide general case for subassembling
22eb97c9d2SStefano Zampini 
2353cdbc3dSStefano Zampini */
240c7d97c5SJed Brown 
25ab5c6b0cSJed Brown #include <../src/ksp/pc/impls/bddc/bddc.h> /*I "petscpc.h" I*/  /* includes for fortran wrappers */
26ab5c6b0cSJed Brown #include <../src/ksp/pc/impls/bddc/bddcprivate.h>
273b03a366Sstefano_zampini #include <petscblaslapack.h>
28674ae819SStefano Zampini 
290369aaf7SStefano Zampini /* temporarily declare it */
300369aaf7SStefano Zampini PetscErrorCode PCApply_BDDC(PC,Vec,Vec);
310369aaf7SStefano Zampini 
320c7d97c5SJed Brown /* -------------------------------------------------------------------------- */
330c7d97c5SJed Brown #undef __FUNCT__
340c7d97c5SJed Brown #define __FUNCT__ "PCSetFromOptions_BDDC"
358c34d3f5SBarry Smith PetscErrorCode PCSetFromOptions_BDDC(PetscOptions *PetscOptionsObject,PC pc)
360c7d97c5SJed Brown {
370c7d97c5SJed Brown   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
380c7d97c5SJed Brown   PetscErrorCode ierr;
390c7d97c5SJed Brown 
400c7d97c5SJed Brown   PetscFunctionBegin;
41e55864a3SBarry Smith   ierr = PetscOptionsHead(PetscOptionsObject,"BDDC options");CHKERRQ(ierr);
428eeda7d8SStefano Zampini   /* Verbose debugging */
438eeda7d8SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_check_level","Verbose output for PCBDDC (intended for debug)","none",pcbddc->dbg_flag,&pcbddc->dbg_flag,NULL);CHKERRQ(ierr);
448eeda7d8SStefano Zampini   /* Primal space cumstomization */
4508a5cf49SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_local_mat_graph","Use or not adjacency graph of local mat for interface analysis","none",pcbddc->use_local_adj,&pcbddc->use_local_adj,NULL);CHKERRQ(ierr);
468eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_vertices","Use or not corner dofs in coarse space","none",pcbddc->use_vertices,&pcbddc->use_vertices,NULL);CHKERRQ(ierr);
478eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_edges","Use or not edge constraints in coarse space","none",pcbddc->use_edges,&pcbddc->use_edges,NULL);CHKERRQ(ierr);
488eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_faces","Use or not face constraints in coarse space","none",pcbddc->use_faces,&pcbddc->use_faces,NULL);CHKERRQ(ierr);
496661aa1dSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_true_nnsp","Use near null space attached to the matrix without modifications","none",pcbddc->use_nnsp_true,&pcbddc->use_nnsp_true,NULL);CHKERRQ(ierr);
50ac632422SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_qr_single","Use QR factorization for single constraints on cc (QR is used when multiple constraints are present)","none",pcbddc->use_qr_single,&pcbddc->use_qr_single,NULL);CHKERRQ(ierr);
518eeda7d8SStefano Zampini   /* Change of basis */
52b9b85e73SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_change_of_basis","Use or not internal change of basis on local edge nodes","none",pcbddc->use_change_of_basis,&pcbddc->use_change_of_basis,NULL);CHKERRQ(ierr);
53b9b85e73SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_change_on_faces","Use or not internal change of basis on local face nodes","none",pcbddc->use_change_on_faces,&pcbddc->use_change_on_faces,NULL);CHKERRQ(ierr);
54674ae819SStefano Zampini   if (!pcbddc->use_change_of_basis) {
55674ae819SStefano Zampini     pcbddc->use_change_on_faces = PETSC_FALSE;
56674ae819SStefano Zampini   }
578eeda7d8SStefano Zampini   /* Switch between M_2 (default) and M_3 preconditioners (as defined by C. Dohrmann in the ref. article) */
588eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_switch_static","Switch on static condensation ops around the interface preconditioner","none",pcbddc->switch_static,&pcbddc->switch_static,NULL);CHKERRQ(ierr);
5974e2c79eSStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_coarse_redistribute","Number of procs where to redistribute coarse problem","none",pcbddc->redistribute_coarse,&pcbddc->redistribute_coarse,NULL);CHKERRQ(ierr);
600298fd71SBarry Smith   ierr = PetscOptionsInt("-pc_bddc_coarsening_ratio","Set coarsening ratio used in multilevel coarsening","none",pcbddc->coarsening_ratio,&pcbddc->coarsening_ratio,NULL);CHKERRQ(ierr);
612b510759SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_levels","Set maximum number of levels for multilevel","none",pcbddc->max_levels,&pcbddc->max_levels,NULL);CHKERRQ(ierr);
62323d395dSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_coarse_estimates","Use estimated eigenvalues for coarse problem","none",pcbddc->use_coarse_estimates,&pcbddc->use_coarse_estimates,NULL);CHKERRQ(ierr);
63674ae819SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_deluxe_scaling","Use deluxe scaling for BDDC","none",pcbddc->use_deluxe_scaling,&pcbddc->use_deluxe_scaling,NULL);CHKERRQ(ierr);
64b96c3477SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_schur_rebuild","Whether or not the interface graph for Schur principal minors has to be rebuilt (i.e. define the interface without any adjacency)","none",pcbddc->sub_schurs_rebuild,&pcbddc->sub_schurs_rebuild,NULL);CHKERRQ(ierr);
65b96c3477SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_schur_layers","Number of dofs' layers for the computation of principal minors (i.e. -1 uses all dofs)","none",pcbddc->sub_schurs_layers,&pcbddc->sub_schurs_layers,NULL);CHKERRQ(ierr);
66b96c3477SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_schur_use_useradj","Whether or not the CSR graph specified by the user should be used for computing successive layers (default is to use adj of local mat)","none",pcbddc->sub_schurs_use_useradj,&pcbddc->sub_schurs_use_useradj,NULL);CHKERRQ(ierr);
67ac632422SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_deluxe_faster","Faster application of deluxe scaling (requires extra work during setup)","none",pcbddc->faster_deluxe,&pcbddc->faster_deluxe,NULL);CHKERRQ(ierr);
684c6709b3SStefano Zampini   ierr = PetscOptionsReal("-pc_bddc_adaptive_threshold","Threshold to be used for adaptive selection of constraints","none",pcbddc->adaptive_threshold,&pcbddc->adaptive_threshold,NULL);CHKERRQ(ierr);
6908122e43SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_adaptive_nmin","Minimum number of constraints per connected components","none",pcbddc->adaptive_nmin,&pcbddc->adaptive_nmin,NULL);CHKERRQ(ierr);
7008122e43SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_adaptive_nmax","Maximum number of constraints per connected components","none",pcbddc->adaptive_nmax,&pcbddc->adaptive_nmax,NULL);CHKERRQ(ierr);
713301b35fSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_symmetric","Symmetric computation of primal basis functions","none",pcbddc->symmetric_primal,&pcbddc->symmetric_primal,NULL);CHKERRQ(ierr);
72b0c7d250SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_coarse_adj","Number of processors where to map the coarse adjacency list","none",pcbddc->coarse_adj_red,&pcbddc->coarse_adj_red,NULL);CHKERRQ(ierr);
7306a4e24aSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_benign_trick","Apply the benign subspace trick to a class of saddle point problems","none",pcbddc->benign_saddle_point,&pcbddc->benign_saddle_point,NULL);CHKERRQ(ierr);
740c7d97c5SJed Brown   ierr = PetscOptionsTail();CHKERRQ(ierr);
750c7d97c5SJed Brown   PetscFunctionReturn(0);
760c7d97c5SJed Brown }
770c7d97c5SJed Brown /* -------------------------------------------------------------------------- */
78674ae819SStefano Zampini #undef __FUNCT__
79906d46d4SStefano Zampini #define __FUNCT__ "PCBDDCSetChangeOfBasisMat_BDDC"
80906d46d4SStefano Zampini static PetscErrorCode PCBDDCSetChangeOfBasisMat_BDDC(PC pc, Mat change)
81b9b85e73SStefano Zampini {
82b9b85e73SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
83b9b85e73SStefano Zampini   PetscErrorCode ierr;
84b9b85e73SStefano Zampini 
85b9b85e73SStefano Zampini   PetscFunctionBegin;
86b9b85e73SStefano Zampini   ierr = MatDestroy(&pcbddc->user_ChangeOfBasisMatrix);CHKERRQ(ierr);
87b9b85e73SStefano Zampini   ierr = PetscObjectReference((PetscObject)change);CHKERRQ(ierr);
88b9b85e73SStefano Zampini   pcbddc->user_ChangeOfBasisMatrix = change;
89b9b85e73SStefano Zampini   PetscFunctionReturn(0);
90b9b85e73SStefano Zampini }
91b9b85e73SStefano Zampini #undef __FUNCT__
92906d46d4SStefano Zampini #define __FUNCT__ "PCBDDCSetChangeOfBasisMat"
93b9b85e73SStefano Zampini /*@
94906d46d4SStefano Zampini  PCBDDCSetChangeOfBasisMat - Set user defined change of basis for dofs
95b9b85e73SStefano Zampini 
96b9b85e73SStefano Zampini    Collective on PC
97b9b85e73SStefano Zampini 
98b9b85e73SStefano Zampini    Input Parameters:
99b9b85e73SStefano Zampini +  pc - the preconditioning context
100906d46d4SStefano Zampini -  change - the change of basis matrix
101b9b85e73SStefano Zampini 
102b9b85e73SStefano Zampini    Level: intermediate
103b9b85e73SStefano Zampini 
104b9b85e73SStefano Zampini    Notes:
105b9b85e73SStefano Zampini 
106b9b85e73SStefano Zampini .seealso: PCBDDC
107b9b85e73SStefano Zampini @*/
108906d46d4SStefano Zampini PetscErrorCode PCBDDCSetChangeOfBasisMat(PC pc, Mat change)
109b9b85e73SStefano Zampini {
110b9b85e73SStefano Zampini   PetscErrorCode ierr;
111b9b85e73SStefano Zampini 
112b9b85e73SStefano Zampini   PetscFunctionBegin;
113b9b85e73SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
114b9b85e73SStefano Zampini   PetscValidHeaderSpecific(change,MAT_CLASSID,2);
115906d46d4SStefano Zampini   PetscCheckSameComm(pc,1,change,2);
116906d46d4SStefano Zampini   if (pc->mat) {
117906d46d4SStefano Zampini     PetscInt rows_c,cols_c,rows,cols;
118906d46d4SStefano Zampini     ierr = MatGetSize(pc->mat,&rows,&cols);CHKERRQ(ierr);
119906d46d4SStefano Zampini     ierr = MatGetSize(change,&rows_c,&cols_c);CHKERRQ(ierr);
120906d46d4SStefano Zampini     if (rows_c != rows) {
121906d46d4SStefano Zampini       SETERRQ2(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Invalid number of rows for change of basis matrix! %d != %d",rows_c,rows);
122906d46d4SStefano Zampini     }
123906d46d4SStefano Zampini     if (cols_c != cols) {
124906d46d4SStefano Zampini       SETERRQ2(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Invalid number of columns for change of basis matrix! %d != %d",cols_c,cols);
125906d46d4SStefano Zampini     }
126906d46d4SStefano Zampini     ierr = MatGetLocalSize(pc->mat,&rows,&cols);CHKERRQ(ierr);
127906d46d4SStefano Zampini     ierr = MatGetLocalSize(change,&rows_c,&cols_c);CHKERRQ(ierr);
128906d46d4SStefano Zampini     if (rows_c != rows) {
129906d46d4SStefano Zampini       SETERRQ2(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Invalid number of local rows for change of basis matrix! %d != %d",rows_c,rows);
130906d46d4SStefano Zampini     }
131906d46d4SStefano Zampini     if (cols_c != cols) {
132906d46d4SStefano Zampini       SETERRQ2(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Invalid number of local columns for change of basis matrix! %d != %d",cols_c,cols);
133906d46d4SStefano Zampini     }
134906d46d4SStefano Zampini   }
135906d46d4SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetChangeOfBasisMat_C",(PC,Mat),(pc,change));CHKERRQ(ierr);
136b9b85e73SStefano Zampini   PetscFunctionReturn(0);
137b9b85e73SStefano Zampini }
138b9b85e73SStefano Zampini /* -------------------------------------------------------------------------- */
139b9b85e73SStefano Zampini #undef __FUNCT__
140674ae819SStefano Zampini #define __FUNCT__ "PCBDDCSetPrimalVerticesLocalIS_BDDC"
141674ae819SStefano Zampini static PetscErrorCode PCBDDCSetPrimalVerticesLocalIS_BDDC(PC pc, IS PrimalVertices)
142674ae819SStefano Zampini {
143674ae819SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
144674ae819SStefano Zampini   PetscErrorCode ierr;
1451e6b0712SBarry Smith 
146674ae819SStefano Zampini   PetscFunctionBegin;
147674ae819SStefano Zampini   ierr = ISDestroy(&pcbddc->user_primal_vertices);CHKERRQ(ierr);
148674ae819SStefano Zampini   ierr = PetscObjectReference((PetscObject)PrimalVertices);CHKERRQ(ierr);
149674ae819SStefano Zampini   pcbddc->user_primal_vertices = PrimalVertices;
150674ae819SStefano Zampini   PetscFunctionReturn(0);
151674ae819SStefano Zampini }
152674ae819SStefano Zampini #undef __FUNCT__
153674ae819SStefano Zampini #define __FUNCT__ "PCBDDCSetPrimalVerticesLocalIS"
154674ae819SStefano Zampini /*@
15528509bceSStefano Zampini  PCBDDCSetPrimalVerticesLocalIS - Set additional user defined primal vertices in PCBDDC
156674ae819SStefano Zampini 
15717eb1463SStefano Zampini    Collective
158674ae819SStefano Zampini 
159674ae819SStefano Zampini    Input Parameters:
160674ae819SStefano Zampini +  pc - the preconditioning context
16117eb1463SStefano Zampini -  PrimalVertices - index set of primal vertices in local numbering (can be empty)
162674ae819SStefano Zampini 
163674ae819SStefano Zampini    Level: intermediate
164674ae819SStefano Zampini 
165674ae819SStefano Zampini    Notes:
166674ae819SStefano Zampini 
167674ae819SStefano Zampini .seealso: PCBDDC
168674ae819SStefano Zampini @*/
169674ae819SStefano Zampini PetscErrorCode PCBDDCSetPrimalVerticesLocalIS(PC pc, IS PrimalVertices)
170674ae819SStefano Zampini {
171674ae819SStefano Zampini   PetscErrorCode ierr;
172674ae819SStefano Zampini 
173674ae819SStefano Zampini   PetscFunctionBegin;
174674ae819SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
175674ae819SStefano Zampini   PetscValidHeaderSpecific(PrimalVertices,IS_CLASSID,2);
17617eb1463SStefano Zampini   PetscCheckSameComm(pc,1,PrimalVertices,2);
177674ae819SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetPrimalVerticesLocalIS_C",(PC,IS),(pc,PrimalVertices));CHKERRQ(ierr);
178674ae819SStefano Zampini   PetscFunctionReturn(0);
179674ae819SStefano Zampini }
180674ae819SStefano Zampini /* -------------------------------------------------------------------------- */
1810c7d97c5SJed Brown #undef __FUNCT__
1824fad6a16SStefano Zampini #define __FUNCT__ "PCBDDCSetCoarseningRatio_BDDC"
1834fad6a16SStefano Zampini static PetscErrorCode PCBDDCSetCoarseningRatio_BDDC(PC pc,PetscInt k)
1844fad6a16SStefano Zampini {
1854fad6a16SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
1864fad6a16SStefano Zampini 
1874fad6a16SStefano Zampini   PetscFunctionBegin;
1884fad6a16SStefano Zampini   pcbddc->coarsening_ratio = k;
1894fad6a16SStefano Zampini   PetscFunctionReturn(0);
1904fad6a16SStefano Zampini }
1911e6b0712SBarry Smith 
1924fad6a16SStefano Zampini #undef __FUNCT__
1934fad6a16SStefano Zampini #define __FUNCT__ "PCBDDCSetCoarseningRatio"
1944fad6a16SStefano Zampini /*@
19528509bceSStefano Zampini  PCBDDCSetCoarseningRatio - Set coarsening ratio used in multilevel
1964fad6a16SStefano Zampini 
1974fad6a16SStefano Zampini    Logically collective on PC
1984fad6a16SStefano Zampini 
1994fad6a16SStefano Zampini    Input Parameters:
2004fad6a16SStefano Zampini +  pc - the preconditioning context
20128509bceSStefano Zampini -  k - coarsening ratio (H/h at the coarser level)
2024fad6a16SStefano Zampini 
2030f202f7eSStefano Zampini    Options Database Keys:
2040f202f7eSStefano Zampini .    -pc_bddc_coarsening_ratio
2054fad6a16SStefano Zampini 
2064fad6a16SStefano Zampini    Level: intermediate
2074fad6a16SStefano Zampini 
2084fad6a16SStefano Zampini    Notes:
2090f202f7eSStefano Zampini      Approximatively k subdomains at the finer level will be aggregated into a single subdomain at the coarser level
2104fad6a16SStefano Zampini 
2110f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetLevels()
2124fad6a16SStefano Zampini @*/
2134fad6a16SStefano Zampini PetscErrorCode PCBDDCSetCoarseningRatio(PC pc,PetscInt k)
2144fad6a16SStefano Zampini {
2154fad6a16SStefano Zampini   PetscErrorCode ierr;
2164fad6a16SStefano Zampini 
2174fad6a16SStefano Zampini   PetscFunctionBegin;
2184fad6a16SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
2192b510759SStefano Zampini   PetscValidLogicalCollectiveInt(pc,k,2);
2204fad6a16SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetCoarseningRatio_C",(PC,PetscInt),(pc,k));CHKERRQ(ierr);
2214fad6a16SStefano Zampini   PetscFunctionReturn(0);
2224fad6a16SStefano Zampini }
2232b510759SStefano Zampini 
224b8ffe317SStefano Zampini /* The following functions (PCBDDCSetUseExactDirichlet PCBDDCSetLevel) are not public */
2252b510759SStefano Zampini #undef __FUNCT__
226b8ffe317SStefano Zampini #define __FUNCT__ "PCBDDCSetUseExactDirichlet_BDDC"
227b8ffe317SStefano Zampini static PetscErrorCode PCBDDCSetUseExactDirichlet_BDDC(PC pc,PetscBool flg)
228b8ffe317SStefano Zampini {
229b8ffe317SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
230b8ffe317SStefano Zampini 
231b8ffe317SStefano Zampini   PetscFunctionBegin;
23285c4d303SStefano Zampini   pcbddc->use_exact_dirichlet_trick = flg;
233b8ffe317SStefano Zampini   PetscFunctionReturn(0);
234b8ffe317SStefano Zampini }
235b8ffe317SStefano Zampini 
236b8ffe317SStefano Zampini #undef __FUNCT__
237b8ffe317SStefano Zampini #define __FUNCT__ "PCBDDCSetUseExactDirichlet"
238b8ffe317SStefano Zampini PetscErrorCode PCBDDCSetUseExactDirichlet(PC pc,PetscBool flg)
2392b510759SStefano Zampini {
2402b510759SStefano Zampini   PetscErrorCode ierr;
2412b510759SStefano Zampini 
2422b510759SStefano Zampini   PetscFunctionBegin;
2432b510759SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
244b8ffe317SStefano Zampini   PetscValidLogicalCollectiveBool(pc,flg,2);
245b8ffe317SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetUseExactDirichlet_C",(PC,PetscBool),(pc,flg));CHKERRQ(ierr);
2462b510759SStefano Zampini   PetscFunctionReturn(0);
2472b510759SStefano Zampini }
2481e6b0712SBarry Smith 
2494fad6a16SStefano Zampini #undef __FUNCT__
2502b510759SStefano Zampini #define __FUNCT__ "PCBDDCSetLevel_BDDC"
2512b510759SStefano Zampini static PetscErrorCode PCBDDCSetLevel_BDDC(PC pc,PetscInt level)
2524fad6a16SStefano Zampini {
2534fad6a16SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
2544fad6a16SStefano Zampini 
2554fad6a16SStefano Zampini   PetscFunctionBegin;
2562b510759SStefano Zampini   pcbddc->current_level = level;
2574fad6a16SStefano Zampini   PetscFunctionReturn(0);
2584fad6a16SStefano Zampini }
2591e6b0712SBarry Smith 
2604fad6a16SStefano Zampini #undef __FUNCT__
261b8ffe317SStefano Zampini #define __FUNCT__ "PCBDDCSetLevel"
262b8ffe317SStefano Zampini PetscErrorCode PCBDDCSetLevel(PC pc,PetscInt level)
263b8ffe317SStefano Zampini {
264b8ffe317SStefano Zampini   PetscErrorCode ierr;
265b8ffe317SStefano Zampini 
266b8ffe317SStefano Zampini   PetscFunctionBegin;
267b8ffe317SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
268b8ffe317SStefano Zampini   PetscValidLogicalCollectiveInt(pc,level,2);
269b8ffe317SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetLevel_C",(PC,PetscInt),(pc,level));CHKERRQ(ierr);
270b8ffe317SStefano Zampini   PetscFunctionReturn(0);
271b8ffe317SStefano Zampini }
272b8ffe317SStefano Zampini 
273b8ffe317SStefano Zampini #undef __FUNCT__
2742b510759SStefano Zampini #define __FUNCT__ "PCBDDCSetLevels_BDDC"
2752b510759SStefano Zampini static PetscErrorCode PCBDDCSetLevels_BDDC(PC pc,PetscInt levels)
2762b510759SStefano Zampini {
2772b510759SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
2782b510759SStefano Zampini 
2792b510759SStefano Zampini   PetscFunctionBegin;
2802b510759SStefano Zampini   pcbddc->max_levels = levels;
2812b510759SStefano Zampini   PetscFunctionReturn(0);
2822b510759SStefano Zampini }
2832b510759SStefano Zampini 
2842b510759SStefano Zampini #undef __FUNCT__
2852b510759SStefano Zampini #define __FUNCT__ "PCBDDCSetLevels"
2864fad6a16SStefano Zampini /*@
28728509bceSStefano Zampini  PCBDDCSetLevels - Sets the maximum number of levels for multilevel
2884fad6a16SStefano Zampini 
2894fad6a16SStefano Zampini    Logically collective on PC
2904fad6a16SStefano Zampini 
2914fad6a16SStefano Zampini    Input Parameters:
2924fad6a16SStefano Zampini +  pc - the preconditioning context
29328509bceSStefano Zampini -  levels - the maximum number of levels (max 9)
2944fad6a16SStefano Zampini 
2950f202f7eSStefano Zampini    Options Database Keys:
2960f202f7eSStefano Zampini .    -pc_bddc_levels
2974fad6a16SStefano Zampini 
2984fad6a16SStefano Zampini    Level: intermediate
2994fad6a16SStefano Zampini 
3004fad6a16SStefano Zampini    Notes:
3010f202f7eSStefano Zampini      Default value is 0, i.e. traditional one-level BDDC
3024fad6a16SStefano Zampini 
3030f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetCoarseningRatio()
3044fad6a16SStefano Zampini @*/
3052b510759SStefano Zampini PetscErrorCode PCBDDCSetLevels(PC pc,PetscInt levels)
3064fad6a16SStefano Zampini {
3074fad6a16SStefano Zampini   PetscErrorCode ierr;
3084fad6a16SStefano Zampini 
3094fad6a16SStefano Zampini   PetscFunctionBegin;
3104fad6a16SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
3112b510759SStefano Zampini   PetscValidLogicalCollectiveInt(pc,levels,2);
312312be037SStefano Zampini   if (levels > 99) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Maximum number of levels for bddc is 99\n");
3132b510759SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetLevels_C",(PC,PetscInt),(pc,levels));CHKERRQ(ierr);
3144fad6a16SStefano Zampini   PetscFunctionReturn(0);
3154fad6a16SStefano Zampini }
3164fad6a16SStefano Zampini /* -------------------------------------------------------------------------- */
3171e6b0712SBarry Smith 
3184fad6a16SStefano Zampini #undef __FUNCT__
3190bdf917eSStefano Zampini #define __FUNCT__ "PCBDDCSetNullSpace_BDDC"
3200bdf917eSStefano Zampini static PetscErrorCode PCBDDCSetNullSpace_BDDC(PC pc,MatNullSpace NullSpace)
3210bdf917eSStefano Zampini {
3220bdf917eSStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
3230bdf917eSStefano Zampini   PetscErrorCode ierr;
3240bdf917eSStefano Zampini 
3250bdf917eSStefano Zampini   PetscFunctionBegin;
3260bdf917eSStefano Zampini   ierr = PetscObjectReference((PetscObject)NullSpace);CHKERRQ(ierr);
3270bdf917eSStefano Zampini   ierr = MatNullSpaceDestroy(&pcbddc->NullSpace);CHKERRQ(ierr);
3280bdf917eSStefano Zampini   pcbddc->NullSpace = NullSpace;
3290bdf917eSStefano Zampini   PetscFunctionReturn(0);
3300bdf917eSStefano Zampini }
3311e6b0712SBarry Smith 
3320bdf917eSStefano Zampini #undef __FUNCT__
3330bdf917eSStefano Zampini #define __FUNCT__ "PCBDDCSetNullSpace"
3340bdf917eSStefano Zampini /*@
33528509bceSStefano Zampini  PCBDDCSetNullSpace - Set nullspace for BDDC operator
3360bdf917eSStefano Zampini 
3370bdf917eSStefano Zampini    Logically collective on PC and MatNullSpace
3380bdf917eSStefano Zampini 
3390bdf917eSStefano Zampini    Input Parameters:
3400bdf917eSStefano Zampini +  pc - the preconditioning context
34128509bceSStefano Zampini -  NullSpace - Null space of the linear operator to be preconditioned (Pmat)
3420bdf917eSStefano Zampini 
3430bdf917eSStefano Zampini    Level: intermediate
3440bdf917eSStefano Zampini 
3450bdf917eSStefano Zampini    Notes:
3460bdf917eSStefano Zampini 
3470bdf917eSStefano Zampini .seealso: PCBDDC
3480bdf917eSStefano Zampini @*/
3490bdf917eSStefano Zampini PetscErrorCode PCBDDCSetNullSpace(PC pc,MatNullSpace NullSpace)
3500bdf917eSStefano Zampini {
3510bdf917eSStefano Zampini   PetscErrorCode ierr;
3520bdf917eSStefano Zampini 
3530bdf917eSStefano Zampini   PetscFunctionBegin;
3540bdf917eSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
355674ae819SStefano Zampini   PetscValidHeaderSpecific(NullSpace,MAT_NULLSPACE_CLASSID,2);
3562b510759SStefano Zampini   PetscCheckSameComm(pc,1,NullSpace,2);
3570bdf917eSStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetNullSpace_C",(PC,MatNullSpace),(pc,NullSpace));CHKERRQ(ierr);
3580bdf917eSStefano Zampini   PetscFunctionReturn(0);
3590bdf917eSStefano Zampini }
3600bdf917eSStefano Zampini /* -------------------------------------------------------------------------- */
3611e6b0712SBarry Smith 
3620bdf917eSStefano Zampini #undef __FUNCT__
3633b03a366Sstefano_zampini #define __FUNCT__ "PCBDDCSetDirichletBoundaries_BDDC"
3643b03a366Sstefano_zampini static PetscErrorCode PCBDDCSetDirichletBoundaries_BDDC(PC pc,IS DirichletBoundaries)
3653b03a366Sstefano_zampini {
3663b03a366Sstefano_zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
3673b03a366Sstefano_zampini   PetscErrorCode ierr;
3683b03a366Sstefano_zampini 
3693b03a366Sstefano_zampini   PetscFunctionBegin;
370785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
371785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->DirichletBoundariesLocal);CHKERRQ(ierr);
3723b03a366Sstefano_zampini   ierr = ISDestroy(&pcbddc->DirichletBoundaries);CHKERRQ(ierr);
37336e030ebSStefano Zampini   ierr = PetscObjectReference((PetscObject)DirichletBoundaries);CHKERRQ(ierr);
37436e030ebSStefano Zampini   pcbddc->DirichletBoundaries = DirichletBoundaries;
375fb180af4SStefano Zampini   pcbddc->recompute_topography = PETSC_TRUE;
3763b03a366Sstefano_zampini   PetscFunctionReturn(0);
3773b03a366Sstefano_zampini }
3781e6b0712SBarry Smith 
3793b03a366Sstefano_zampini #undef __FUNCT__
3803b03a366Sstefano_zampini #define __FUNCT__ "PCBDDCSetDirichletBoundaries"
3813b03a366Sstefano_zampini /*@
38228509bceSStefano Zampini  PCBDDCSetDirichletBoundaries - Set IS defining Dirichlet boundaries for the global problem.
3833b03a366Sstefano_zampini 
384785d1243SStefano Zampini    Collective
3853b03a366Sstefano_zampini 
3863b03a366Sstefano_zampini    Input Parameters:
3873b03a366Sstefano_zampini +  pc - the preconditioning context
388785d1243SStefano Zampini -  DirichletBoundaries - parallel IS defining the Dirichlet boundaries
3893b03a366Sstefano_zampini 
3903b03a366Sstefano_zampini    Level: intermediate
3913b03a366Sstefano_zampini 
3920f202f7eSStefano Zampini    Notes:
3930f202f7eSStefano Zampini      Provide the information if you used MatZeroRows/Columns routines. Any process can list any global node
3943b03a366Sstefano_zampini 
3950f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetDirichletBoundariesLocal(), MatZeroRows(), MatZeroRowsColumns()
3963b03a366Sstefano_zampini @*/
3973b03a366Sstefano_zampini PetscErrorCode PCBDDCSetDirichletBoundaries(PC pc,IS DirichletBoundaries)
3983b03a366Sstefano_zampini {
3993b03a366Sstefano_zampini   PetscErrorCode ierr;
4003b03a366Sstefano_zampini 
4013b03a366Sstefano_zampini   PetscFunctionBegin;
4023b03a366Sstefano_zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
403674ae819SStefano Zampini   PetscValidHeaderSpecific(DirichletBoundaries,IS_CLASSID,2);
404785d1243SStefano Zampini   PetscCheckSameComm(pc,1,DirichletBoundaries,2);
4053b03a366Sstefano_zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDirichletBoundaries_C",(PC,IS),(pc,DirichletBoundaries));CHKERRQ(ierr);
4063b03a366Sstefano_zampini   PetscFunctionReturn(0);
4073b03a366Sstefano_zampini }
4083b03a366Sstefano_zampini /* -------------------------------------------------------------------------- */
4091e6b0712SBarry Smith 
4103b03a366Sstefano_zampini #undef __FUNCT__
41182ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCSetDirichletBoundariesLocal_BDDC"
41282ba6b80SStefano Zampini static PetscErrorCode PCBDDCSetDirichletBoundariesLocal_BDDC(PC pc,IS DirichletBoundaries)
4130c7d97c5SJed Brown {
4140c7d97c5SJed Brown   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
4150c7d97c5SJed Brown   PetscErrorCode ierr;
4160c7d97c5SJed Brown 
4170c7d97c5SJed Brown   PetscFunctionBegin;
418785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
419785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->DirichletBoundariesLocal);CHKERRQ(ierr);
4200c7d97c5SJed Brown   ierr = ISDestroy(&pcbddc->DirichletBoundaries);CHKERRQ(ierr);
4210c7d97c5SJed Brown   ierr = PetscObjectReference((PetscObject)DirichletBoundaries);CHKERRQ(ierr);
422785d1243SStefano Zampini   pcbddc->DirichletBoundariesLocal = DirichletBoundaries;
4237d24d155SStefano Zampini   pcbddc->recompute_topography = PETSC_TRUE;
4240c7d97c5SJed Brown   PetscFunctionReturn(0);
4250c7d97c5SJed Brown }
4260c7d97c5SJed Brown 
4270c7d97c5SJed Brown #undef __FUNCT__
42882ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCSetDirichletBoundariesLocal"
4299c0446d6SStefano Zampini /*@
43082ba6b80SStefano Zampini  PCBDDCSetDirichletBoundariesLocal - Set IS defining Dirichlet boundaries for the global problem in local ordering.
4319c0446d6SStefano Zampini 
432785d1243SStefano Zampini    Collective
43353cdbc3dSStefano Zampini 
43453cdbc3dSStefano Zampini    Input Parameters:
43553cdbc3dSStefano Zampini +  pc - the preconditioning context
43682ba6b80SStefano Zampini -  DirichletBoundaries - parallel IS defining the Dirichlet boundaries (in local ordering)
43753cdbc3dSStefano Zampini 
43853cdbc3dSStefano Zampini    Level: intermediate
43953cdbc3dSStefano Zampini 
4409c0446d6SStefano Zampini    Notes:
44153cdbc3dSStefano Zampini 
4420f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetDirichletBoundaries(), MatZeroRows(), MatZeroRowsColumns()
44353cdbc3dSStefano Zampini @*/
44482ba6b80SStefano Zampini PetscErrorCode PCBDDCSetDirichletBoundariesLocal(PC pc,IS DirichletBoundaries)
4450c7d97c5SJed Brown {
4460c7d97c5SJed Brown   PetscErrorCode ierr;
4470c7d97c5SJed Brown 
4480c7d97c5SJed Brown   PetscFunctionBegin;
4490c7d97c5SJed Brown   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
4500c7d97c5SJed Brown   PetscValidHeaderSpecific(DirichletBoundaries,IS_CLASSID,2);
45182ba6b80SStefano Zampini   PetscCheckSameComm(pc,1,DirichletBoundaries,2);
45282ba6b80SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDirichletBoundariesLocal_C",(PC,IS),(pc,DirichletBoundaries));CHKERRQ(ierr);
4530c7d97c5SJed Brown   PetscFunctionReturn(0);
4540c7d97c5SJed Brown }
4550c7d97c5SJed Brown /* -------------------------------------------------------------------------- */
4560c7d97c5SJed Brown 
4570c7d97c5SJed Brown #undef __FUNCT__
4580c7d97c5SJed Brown #define __FUNCT__ "PCBDDCSetNeumannBoundaries_BDDC"
45953cdbc3dSStefano Zampini static PetscErrorCode PCBDDCSetNeumannBoundaries_BDDC(PC pc,IS NeumannBoundaries)
4600c7d97c5SJed Brown {
4610c7d97c5SJed Brown   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
46253cdbc3dSStefano Zampini   PetscErrorCode ierr;
4630c7d97c5SJed Brown 
4640c7d97c5SJed Brown   PetscFunctionBegin;
465785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
466785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->NeumannBoundariesLocal);CHKERRQ(ierr);
46753cdbc3dSStefano Zampini   ierr = ISDestroy(&pcbddc->NeumannBoundaries);CHKERRQ(ierr);
46836e030ebSStefano Zampini   ierr = PetscObjectReference((PetscObject)NeumannBoundaries);CHKERRQ(ierr);
46936e030ebSStefano Zampini   pcbddc->NeumannBoundaries = NeumannBoundaries;
470fb180af4SStefano Zampini   pcbddc->recompute_topography = PETSC_TRUE;
4710c7d97c5SJed Brown   PetscFunctionReturn(0);
4720c7d97c5SJed Brown }
4731e6b0712SBarry Smith 
4740c7d97c5SJed Brown #undef __FUNCT__
4750c7d97c5SJed Brown #define __FUNCT__ "PCBDDCSetNeumannBoundaries"
47657527edcSJed Brown /*@
47728509bceSStefano Zampini  PCBDDCSetNeumannBoundaries - Set IS defining Neumann boundaries for the global problem.
47857527edcSJed Brown 
479785d1243SStefano Zampini    Collective
48057527edcSJed Brown 
48157527edcSJed Brown    Input Parameters:
48257527edcSJed Brown +  pc - the preconditioning context
483785d1243SStefano Zampini -  NeumannBoundaries - parallel IS defining the Neumann boundaries
48457527edcSJed Brown 
48557527edcSJed Brown    Level: intermediate
48657527edcSJed Brown 
4870f202f7eSStefano Zampini    Notes:
4880f202f7eSStefano Zampini      Any process can list any global node
48957527edcSJed Brown 
4900f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetNeumannBoundariesLocal()
49157527edcSJed Brown @*/
49253cdbc3dSStefano Zampini PetscErrorCode PCBDDCSetNeumannBoundaries(PC pc,IS NeumannBoundaries)
4930c7d97c5SJed Brown {
4940c7d97c5SJed Brown   PetscErrorCode ierr;
4950c7d97c5SJed Brown 
4960c7d97c5SJed Brown   PetscFunctionBegin;
4970c7d97c5SJed Brown   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
498674ae819SStefano Zampini   PetscValidHeaderSpecific(NeumannBoundaries,IS_CLASSID,2);
499785d1243SStefano Zampini   PetscCheckSameComm(pc,1,NeumannBoundaries,2);
50053cdbc3dSStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetNeumannBoundaries_C",(PC,IS),(pc,NeumannBoundaries));CHKERRQ(ierr);
50153cdbc3dSStefano Zampini   PetscFunctionReturn(0);
50253cdbc3dSStefano Zampini }
50353cdbc3dSStefano Zampini /* -------------------------------------------------------------------------- */
5041e6b0712SBarry Smith 
50553cdbc3dSStefano Zampini #undef __FUNCT__
50682ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCSetNeumannBoundariesLocal_BDDC"
50782ba6b80SStefano Zampini static PetscErrorCode PCBDDCSetNeumannBoundariesLocal_BDDC(PC pc,IS NeumannBoundaries)
5080c7d97c5SJed Brown {
5090c7d97c5SJed Brown   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
5100c7d97c5SJed Brown   PetscErrorCode ierr;
5110c7d97c5SJed Brown 
5120c7d97c5SJed Brown   PetscFunctionBegin;
513785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
514785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->NeumannBoundariesLocal);CHKERRQ(ierr);
5150c7d97c5SJed Brown   ierr = ISDestroy(&pcbddc->NeumannBoundaries);CHKERRQ(ierr);
5160c7d97c5SJed Brown   ierr = PetscObjectReference((PetscObject)NeumannBoundaries);CHKERRQ(ierr);
517785d1243SStefano Zampini   pcbddc->NeumannBoundariesLocal = NeumannBoundaries;
5187d24d155SStefano Zampini   pcbddc->recompute_topography = PETSC_TRUE;
5190c7d97c5SJed Brown   PetscFunctionReturn(0);
5200c7d97c5SJed Brown }
5210c7d97c5SJed Brown 
5220c7d97c5SJed Brown #undef __FUNCT__
52382ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCSetNeumannBoundariesLocal"
5240c7d97c5SJed Brown /*@
52582ba6b80SStefano Zampini  PCBDDCSetNeumannBoundariesLocal - Set IS defining Neumann boundaries for the global problem in local ordering.
5260c7d97c5SJed Brown 
527785d1243SStefano Zampini    Collective
5280c7d97c5SJed Brown 
5290c7d97c5SJed Brown    Input Parameters:
5300c7d97c5SJed Brown +  pc - the preconditioning context
53182ba6b80SStefano Zampini -  NeumannBoundaries - parallel IS defining the subdomain part of Neumann boundaries (in local ordering)
5320c7d97c5SJed Brown 
5330c7d97c5SJed Brown    Level: intermediate
5340c7d97c5SJed Brown 
5350c7d97c5SJed Brown    Notes:
5360c7d97c5SJed Brown 
5370f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetNeumannBoundaries()
5380c7d97c5SJed Brown @*/
53982ba6b80SStefano Zampini PetscErrorCode PCBDDCSetNeumannBoundariesLocal(PC pc,IS NeumannBoundaries)
5400c7d97c5SJed Brown {
5410c7d97c5SJed Brown   PetscErrorCode ierr;
5420c7d97c5SJed Brown 
5430c7d97c5SJed Brown   PetscFunctionBegin;
5440c7d97c5SJed Brown   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
5450c7d97c5SJed Brown   PetscValidHeaderSpecific(NeumannBoundaries,IS_CLASSID,2);
54682ba6b80SStefano Zampini   PetscCheckSameComm(pc,1,NeumannBoundaries,2);
54782ba6b80SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetNeumannBoundariesLocal_C",(PC,IS),(pc,NeumannBoundaries));CHKERRQ(ierr);
54853cdbc3dSStefano Zampini   PetscFunctionReturn(0);
54953cdbc3dSStefano Zampini }
55053cdbc3dSStefano Zampini /* -------------------------------------------------------------------------- */
55153cdbc3dSStefano Zampini 
55253cdbc3dSStefano Zampini #undef __FUNCT__
553da1bb401SStefano Zampini #define __FUNCT__ "PCBDDCGetDirichletBoundaries_BDDC"
554da1bb401SStefano Zampini static PetscErrorCode PCBDDCGetDirichletBoundaries_BDDC(PC pc,IS *DirichletBoundaries)
555da1bb401SStefano Zampini {
556da1bb401SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
557da1bb401SStefano Zampini 
558da1bb401SStefano Zampini   PetscFunctionBegin;
559da1bb401SStefano Zampini   *DirichletBoundaries = pcbddc->DirichletBoundaries;
560da1bb401SStefano Zampini   PetscFunctionReturn(0);
561da1bb401SStefano Zampini }
5621e6b0712SBarry Smith 
563da1bb401SStefano Zampini #undef __FUNCT__
564da1bb401SStefano Zampini #define __FUNCT__ "PCBDDCGetDirichletBoundaries"
565da1bb401SStefano Zampini /*@
566785d1243SStefano Zampini  PCBDDCGetDirichletBoundaries - Get parallel IS for Dirichlet boundaries
567da1bb401SStefano Zampini 
568785d1243SStefano Zampini    Collective
569785d1243SStefano Zampini 
570785d1243SStefano Zampini    Input Parameters:
571785d1243SStefano Zampini .  pc - the preconditioning context
572785d1243SStefano Zampini 
573785d1243SStefano Zampini    Output Parameters:
574785d1243SStefano Zampini .  DirichletBoundaries - index set defining the Dirichlet boundaries
575785d1243SStefano Zampini 
576785d1243SStefano Zampini    Level: intermediate
577785d1243SStefano Zampini 
5780f202f7eSStefano Zampini    Notes:
5790f202f7eSStefano Zampini      The IS returned (if any) is the same passed in earlier by the user with PCBDDCSetDirichletBoundaries
580785d1243SStefano Zampini 
581785d1243SStefano Zampini .seealso: PCBDDC
582785d1243SStefano Zampini @*/
583785d1243SStefano Zampini PetscErrorCode PCBDDCGetDirichletBoundaries(PC pc,IS *DirichletBoundaries)
584785d1243SStefano Zampini {
585785d1243SStefano Zampini   PetscErrorCode ierr;
586785d1243SStefano Zampini 
587785d1243SStefano Zampini   PetscFunctionBegin;
588785d1243SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
589785d1243SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetDirichletBoundaries_C",(PC,IS*),(pc,DirichletBoundaries));CHKERRQ(ierr);
590785d1243SStefano Zampini   PetscFunctionReturn(0);
591785d1243SStefano Zampini }
592785d1243SStefano Zampini /* -------------------------------------------------------------------------- */
593785d1243SStefano Zampini 
594785d1243SStefano Zampini #undef __FUNCT__
595785d1243SStefano Zampini #define __FUNCT__ "PCBDDCGetDirichletBoundariesLocal_BDDC"
596785d1243SStefano Zampini static PetscErrorCode PCBDDCGetDirichletBoundariesLocal_BDDC(PC pc,IS *DirichletBoundaries)
597785d1243SStefano Zampini {
598785d1243SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
599785d1243SStefano Zampini 
600785d1243SStefano Zampini   PetscFunctionBegin;
601785d1243SStefano Zampini   *DirichletBoundaries = pcbddc->DirichletBoundariesLocal;
602785d1243SStefano Zampini   PetscFunctionReturn(0);
603785d1243SStefano Zampini }
604785d1243SStefano Zampini 
605785d1243SStefano Zampini #undef __FUNCT__
60682ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCGetDirichletBoundariesLocal"
607da1bb401SStefano Zampini /*@
60882ba6b80SStefano Zampini  PCBDDCGetDirichletBoundariesLocal - Get parallel IS for Dirichlet boundaries (in local ordering)
609da1bb401SStefano Zampini 
610785d1243SStefano Zampini    Collective
611da1bb401SStefano Zampini 
612da1bb401SStefano Zampini    Input Parameters:
61328509bceSStefano Zampini .  pc - the preconditioning context
614da1bb401SStefano Zampini 
615da1bb401SStefano Zampini    Output Parameters:
61628509bceSStefano Zampini .  DirichletBoundaries - index set defining the subdomain part of Dirichlet boundaries
617da1bb401SStefano Zampini 
618da1bb401SStefano Zampini    Level: intermediate
619da1bb401SStefano Zampini 
620da1bb401SStefano Zampini    Notes:
6210f202f7eSStefano Zampini      The IS returned could be the same passed in earlier by the user (if provided with PCBDDCSetDirichletBoundariesLocal) or a global-to-local map of the global IS (if provided with PCBDDCSetDirichletBoundaries).
6220f202f7eSStefano Zampini           In the latter case, the IS will be available after PCSetUp.
623da1bb401SStefano Zampini 
624da1bb401SStefano Zampini .seealso: PCBDDC
625da1bb401SStefano Zampini @*/
62682ba6b80SStefano Zampini PetscErrorCode PCBDDCGetDirichletBoundariesLocal(PC pc,IS *DirichletBoundaries)
627da1bb401SStefano Zampini {
628da1bb401SStefano Zampini   PetscErrorCode ierr;
629da1bb401SStefano Zampini 
630da1bb401SStefano Zampini   PetscFunctionBegin;
631da1bb401SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
63282ba6b80SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetDirichletBoundariesLocal_C",(PC,IS*),(pc,DirichletBoundaries));CHKERRQ(ierr);
633da1bb401SStefano Zampini   PetscFunctionReturn(0);
634da1bb401SStefano Zampini }
635da1bb401SStefano Zampini /* -------------------------------------------------------------------------- */
6361e6b0712SBarry Smith 
637da1bb401SStefano Zampini #undef __FUNCT__
63853cdbc3dSStefano Zampini #define __FUNCT__ "PCBDDCGetNeumannBoundaries_BDDC"
63953cdbc3dSStefano Zampini static PetscErrorCode PCBDDCGetNeumannBoundaries_BDDC(PC pc,IS *NeumannBoundaries)
64053cdbc3dSStefano Zampini {
64153cdbc3dSStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
64253cdbc3dSStefano Zampini 
64353cdbc3dSStefano Zampini   PetscFunctionBegin;
64453cdbc3dSStefano Zampini   *NeumannBoundaries = pcbddc->NeumannBoundaries;
64553cdbc3dSStefano Zampini   PetscFunctionReturn(0);
64653cdbc3dSStefano Zampini }
6471e6b0712SBarry Smith 
64853cdbc3dSStefano Zampini #undef __FUNCT__
64953cdbc3dSStefano Zampini #define __FUNCT__ "PCBDDCGetNeumannBoundaries"
65053cdbc3dSStefano Zampini /*@
651785d1243SStefano Zampini  PCBDDCGetNeumannBoundaries - Get parallel IS for Neumann boundaries
65253cdbc3dSStefano Zampini 
653785d1243SStefano Zampini    Collective
654785d1243SStefano Zampini 
655785d1243SStefano Zampini    Input Parameters:
656785d1243SStefano Zampini .  pc - the preconditioning context
657785d1243SStefano Zampini 
658785d1243SStefano Zampini    Output Parameters:
659785d1243SStefano Zampini .  NeumannBoundaries - index set defining the Neumann boundaries
660785d1243SStefano Zampini 
661785d1243SStefano Zampini    Level: intermediate
662785d1243SStefano Zampini 
6630f202f7eSStefano Zampini    Notes:
6640f202f7eSStefano Zampini      The IS returned (if any) is the same passed in earlier by the user with PCBDDCSetNeumannBoundaries
665785d1243SStefano Zampini 
666785d1243SStefano Zampini .seealso: PCBDDC
667785d1243SStefano Zampini @*/
668785d1243SStefano Zampini PetscErrorCode PCBDDCGetNeumannBoundaries(PC pc,IS *NeumannBoundaries)
669785d1243SStefano Zampini {
670785d1243SStefano Zampini   PetscErrorCode ierr;
671785d1243SStefano Zampini 
672785d1243SStefano Zampini   PetscFunctionBegin;
673785d1243SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
674785d1243SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetNeumannBoundaries_C",(PC,IS*),(pc,NeumannBoundaries));CHKERRQ(ierr);
675785d1243SStefano Zampini   PetscFunctionReturn(0);
676785d1243SStefano Zampini }
677785d1243SStefano Zampini /* -------------------------------------------------------------------------- */
678785d1243SStefano Zampini 
679785d1243SStefano Zampini #undef __FUNCT__
680785d1243SStefano Zampini #define __FUNCT__ "PCBDDCGetNeumannBoundariesLocal_BDDC"
681785d1243SStefano Zampini static PetscErrorCode PCBDDCGetNeumannBoundariesLocal_BDDC(PC pc,IS *NeumannBoundaries)
682785d1243SStefano Zampini {
683785d1243SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
684785d1243SStefano Zampini 
685785d1243SStefano Zampini   PetscFunctionBegin;
686785d1243SStefano Zampini   *NeumannBoundaries = pcbddc->NeumannBoundariesLocal;
687785d1243SStefano Zampini   PetscFunctionReturn(0);
688785d1243SStefano Zampini }
689785d1243SStefano Zampini 
690785d1243SStefano Zampini #undef __FUNCT__
69182ba6b80SStefano Zampini #define __FUNCT__ "PCBDDCGetNeumannBoundariesLocal"
69253cdbc3dSStefano Zampini /*@
69382ba6b80SStefano Zampini  PCBDDCGetNeumannBoundariesLocal - Get parallel IS for Neumann boundaries (in local ordering)
69453cdbc3dSStefano Zampini 
695785d1243SStefano Zampini    Collective
69653cdbc3dSStefano Zampini 
69753cdbc3dSStefano Zampini    Input Parameters:
69828509bceSStefano Zampini .  pc - the preconditioning context
69953cdbc3dSStefano Zampini 
70053cdbc3dSStefano Zampini    Output Parameters:
70128509bceSStefano Zampini .  NeumannBoundaries - index set defining the subdomain part of Neumann boundaries
70253cdbc3dSStefano Zampini 
70353cdbc3dSStefano Zampini    Level: intermediate
70453cdbc3dSStefano Zampini 
70553cdbc3dSStefano Zampini    Notes:
7060f202f7eSStefano Zampini      The IS returned could be the same passed in earlier by the user (if provided with PCBDDCSetNeumannBoundariesLocal) or a global-to-local map of the global IS (if provided with PCBDDCSetNeumannBoundaries).
7070f202f7eSStefano Zampini           In the latter case, the IS will be available after PCSetUp.
70853cdbc3dSStefano Zampini 
70953cdbc3dSStefano Zampini .seealso: PCBDDC
71053cdbc3dSStefano Zampini @*/
71182ba6b80SStefano Zampini PetscErrorCode PCBDDCGetNeumannBoundariesLocal(PC pc,IS *NeumannBoundaries)
71253cdbc3dSStefano Zampini {
71353cdbc3dSStefano Zampini   PetscErrorCode ierr;
71453cdbc3dSStefano Zampini 
71553cdbc3dSStefano Zampini   PetscFunctionBegin;
71653cdbc3dSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
71782ba6b80SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetNeumannBoundariesLocal_C",(PC,IS*),(pc,NeumannBoundaries));CHKERRQ(ierr);
7180c7d97c5SJed Brown   PetscFunctionReturn(0);
7190c7d97c5SJed Brown }
72036e030ebSStefano Zampini /* -------------------------------------------------------------------------- */
7211e6b0712SBarry Smith 
72236e030ebSStefano Zampini #undef __FUNCT__
723da1bb401SStefano Zampini #define __FUNCT__ "PCBDDCSetLocalAdjacencyGraph_BDDC"
7241a83f524SJed Brown static PetscErrorCode PCBDDCSetLocalAdjacencyGraph_BDDC(PC pc, PetscInt nvtxs,const PetscInt xadj[],const PetscInt adjncy[], PetscCopyMode copymode)
72536e030ebSStefano Zampini {
72636e030ebSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
727da1bb401SStefano Zampini   PCBDDCGraph    mat_graph = pcbddc->mat_graph;
728da1bb401SStefano Zampini   PetscErrorCode ierr;
72936e030ebSStefano Zampini 
73036e030ebSStefano Zampini   PetscFunctionBegin;
731674ae819SStefano Zampini   /* free old CSR */
732674ae819SStefano Zampini   ierr = PCBDDCGraphResetCSR(mat_graph);CHKERRQ(ierr);
733fb223d50SStefano Zampini   /* TODO: PCBDDCGraphSetAdjacency */
734674ae819SStefano Zampini   /* get CSR into graph structure */
735da1bb401SStefano Zampini   if (copymode == PETSC_COPY_VALUES) {
736854ce69bSBarry Smith     ierr = PetscMalloc1(nvtxs+1,&mat_graph->xadj);CHKERRQ(ierr);
737785e854fSJed Brown     ierr = PetscMalloc1(xadj[nvtxs],&mat_graph->adjncy);CHKERRQ(ierr);
738674ae819SStefano Zampini     ierr = PetscMemcpy(mat_graph->xadj,xadj,(nvtxs+1)*sizeof(PetscInt));CHKERRQ(ierr);
739674ae819SStefano Zampini     ierr = PetscMemcpy(mat_graph->adjncy,adjncy,xadj[nvtxs]*sizeof(PetscInt));CHKERRQ(ierr);
740da1bb401SStefano Zampini   } else if (copymode == PETSC_OWN_POINTER) {
7411a83f524SJed Brown     mat_graph->xadj = (PetscInt*)xadj;
7421a83f524SJed Brown     mat_graph->adjncy = (PetscInt*)adjncy;
743674ae819SStefano Zampini   }
744575ad6abSStefano Zampini   mat_graph->nvtxs_csr = nvtxs;
74536e030ebSStefano Zampini   PetscFunctionReturn(0);
74636e030ebSStefano Zampini }
7471e6b0712SBarry Smith 
74836e030ebSStefano Zampini #undef __FUNCT__
749da1bb401SStefano Zampini #define __FUNCT__ "PCBDDCSetLocalAdjacencyGraph"
75036e030ebSStefano Zampini /*@
7510f202f7eSStefano Zampini  PCBDDCSetLocalAdjacencyGraph - Set adjacency structure (CSR graph) of the local matrix
75236e030ebSStefano Zampini 
75336e030ebSStefano Zampini    Not collective
75436e030ebSStefano Zampini 
75536e030ebSStefano Zampini    Input Parameters:
75636e030ebSStefano Zampini +  pc - the preconditioning context
7570f202f7eSStefano Zampini .  nvtxs - number of local vertices of the graph (i.e., the size of the local problem)
75828509bceSStefano Zampini .  xadj, adjncy - the CSR graph
75928509bceSStefano Zampini -  copymode - either PETSC_COPY_VALUES or PETSC_OWN_POINTER.
76036e030ebSStefano Zampini 
76136e030ebSStefano Zampini    Level: intermediate
76236e030ebSStefano Zampini 
76336e030ebSStefano Zampini    Notes:
76436e030ebSStefano Zampini 
76528509bceSStefano Zampini .seealso: PCBDDC,PetscCopyMode
76636e030ebSStefano Zampini @*/
7671a83f524SJed Brown PetscErrorCode PCBDDCSetLocalAdjacencyGraph(PC pc,PetscInt nvtxs,const PetscInt xadj[],const PetscInt adjncy[], PetscCopyMode copymode)
76836e030ebSStefano Zampini {
769575ad6abSStefano Zampini   void (*f)(void) = 0;
77036e030ebSStefano Zampini   PetscErrorCode ierr;
77136e030ebSStefano Zampini 
77236e030ebSStefano Zampini   PetscFunctionBegin;
77336e030ebSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
774674ae819SStefano Zampini   PetscValidIntPointer(xadj,3);
775d7de1dd9SStefano Zampini   PetscValidIntPointer(adjncy,4);
776674ae819SStefano Zampini   if (copymode != PETSC_COPY_VALUES && copymode != PETSC_OWN_POINTER) {
777674ae819SStefano Zampini     SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Unsupported copy mode %d in %s\n",copymode,__FUNCT__);
778da1bb401SStefano Zampini   }
77936e030ebSStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetLocalAdjacencyGraph_C",(PC,PetscInt,const PetscInt[],const PetscInt[],PetscCopyMode),(pc,nvtxs,xadj,adjncy,copymode));CHKERRQ(ierr);
780575ad6abSStefano Zampini   /* free arrays if PCBDDC is not the PC type */
781575ad6abSStefano Zampini   ierr = PetscObjectQueryFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",&f);CHKERRQ(ierr);
782575ad6abSStefano Zampini   if (!f && copymode == PETSC_OWN_POINTER) {
783575ad6abSStefano Zampini     ierr = PetscFree(xadj);CHKERRQ(ierr);
784575ad6abSStefano Zampini     ierr = PetscFree(adjncy);CHKERRQ(ierr);
78536e030ebSStefano Zampini   }
78636e030ebSStefano Zampini   PetscFunctionReturn(0);
78736e030ebSStefano Zampini }
7889c0446d6SStefano Zampini /* -------------------------------------------------------------------------- */
7891e6b0712SBarry Smith 
7909c0446d6SStefano Zampini #undef __FUNCT__
79163602bcaSStefano Zampini #define __FUNCT__ "PCBDDCSetDofsSplittingLocal_BDDC"
79263602bcaSStefano Zampini static PetscErrorCode PCBDDCSetDofsSplittingLocal_BDDC(PC pc,PetscInt n_is, IS ISForDofs[])
79363602bcaSStefano Zampini {
79463602bcaSStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
79563602bcaSStefano Zampini   PetscInt i;
79663602bcaSStefano Zampini   PetscErrorCode ierr;
79763602bcaSStefano Zampini 
79863602bcaSStefano Zampini   PetscFunctionBegin;
79963602bcaSStefano Zampini   /* Destroy ISes if they were already set */
80063602bcaSStefano Zampini   for (i=0;i<pcbddc->n_ISForDofsLocal;i++) {
80163602bcaSStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofsLocal[i]);CHKERRQ(ierr);
80263602bcaSStefano Zampini   }
80363602bcaSStefano Zampini   ierr = PetscFree(pcbddc->ISForDofsLocal);CHKERRQ(ierr);
80463602bcaSStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
80563602bcaSStefano Zampini   for (i=0;i<pcbddc->n_ISForDofs;i++) {
80663602bcaSStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofs[i]);CHKERRQ(ierr);
80763602bcaSStefano Zampini   }
80863602bcaSStefano Zampini   ierr = PetscFree(pcbddc->ISForDofs);CHKERRQ(ierr);
80963602bcaSStefano Zampini   pcbddc->n_ISForDofs = 0;
81063602bcaSStefano Zampini   /* allocate space then set */
811d02579f5SStefano Zampini   if (n_is) {
812d02579f5SStefano Zampini     ierr = PetscMalloc1(n_is,&pcbddc->ISForDofsLocal);CHKERRQ(ierr);
813d02579f5SStefano Zampini   }
81463602bcaSStefano Zampini   for (i=0;i<n_is;i++) {
81563602bcaSStefano Zampini     ierr = PetscObjectReference((PetscObject)ISForDofs[i]);CHKERRQ(ierr);
81663602bcaSStefano Zampini     pcbddc->ISForDofsLocal[i]=ISForDofs[i];
81763602bcaSStefano Zampini   }
81863602bcaSStefano Zampini   pcbddc->n_ISForDofsLocal=n_is;
81963602bcaSStefano Zampini   if (n_is) pcbddc->user_provided_isfordofs = PETSC_TRUE;
8201a8a16d1SStefano Zampini   pcbddc->recompute_topography = PETSC_TRUE;
82163602bcaSStefano Zampini   PetscFunctionReturn(0);
82263602bcaSStefano Zampini }
82363602bcaSStefano Zampini 
82463602bcaSStefano Zampini #undef __FUNCT__
82563602bcaSStefano Zampini #define __FUNCT__ "PCBDDCSetDofsSplittingLocal"
82663602bcaSStefano Zampini /*@
82763602bcaSStefano Zampini  PCBDDCSetDofsSplittingLocal - Set index sets defining fields of the local subdomain matrix
82863602bcaSStefano Zampini 
82963602bcaSStefano Zampini    Collective
83063602bcaSStefano Zampini 
83163602bcaSStefano Zampini    Input Parameters:
83263602bcaSStefano Zampini +  pc - the preconditioning context
8330f202f7eSStefano Zampini .  n_is - number of index sets defining the fields
8340f202f7eSStefano Zampini -  ISForDofs - array of IS describing the fields in local ordering
83563602bcaSStefano Zampini 
83663602bcaSStefano Zampini    Level: intermediate
83763602bcaSStefano Zampini 
8380f202f7eSStefano Zampini    Notes:
8390f202f7eSStefano Zampini      n_is should be the same among processes. Not all nodes need to be listed: unlisted nodes will belong to the complement field.
84063602bcaSStefano Zampini 
84163602bcaSStefano Zampini .seealso: PCBDDC
84263602bcaSStefano Zampini @*/
84363602bcaSStefano Zampini PetscErrorCode PCBDDCSetDofsSplittingLocal(PC pc,PetscInt n_is, IS ISForDofs[])
84463602bcaSStefano Zampini {
84563602bcaSStefano Zampini   PetscInt       i;
84663602bcaSStefano Zampini   PetscErrorCode ierr;
84763602bcaSStefano Zampini 
84863602bcaSStefano Zampini   PetscFunctionBegin;
84963602bcaSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
85063602bcaSStefano Zampini   PetscValidLogicalCollectiveInt(pc,n_is,2);
85163602bcaSStefano Zampini   for (i=0;i<n_is;i++) {
85263602bcaSStefano Zampini     PetscCheckSameComm(pc,1,ISForDofs[i],3);
85363602bcaSStefano Zampini     PetscValidHeaderSpecific(ISForDofs[i],IS_CLASSID,3);
85463602bcaSStefano Zampini   }
855e71e7a71SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDofsSplittingLocal_C",(PC,PetscInt,IS[]),(pc,n_is,ISForDofs));CHKERRQ(ierr);
85663602bcaSStefano Zampini   PetscFunctionReturn(0);
85763602bcaSStefano Zampini }
85863602bcaSStefano Zampini /* -------------------------------------------------------------------------- */
85963602bcaSStefano Zampini 
86063602bcaSStefano Zampini #undef __FUNCT__
8619c0446d6SStefano Zampini #define __FUNCT__ "PCBDDCSetDofsSplitting_BDDC"
8629c0446d6SStefano Zampini static PetscErrorCode PCBDDCSetDofsSplitting_BDDC(PC pc,PetscInt n_is, IS ISForDofs[])
8639c0446d6SStefano Zampini {
8649c0446d6SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
8659c0446d6SStefano Zampini   PetscInt i;
8669c0446d6SStefano Zampini   PetscErrorCode ierr;
8679c0446d6SStefano Zampini 
8689c0446d6SStefano Zampini   PetscFunctionBegin;
869da1bb401SStefano Zampini   /* Destroy ISes if they were already set */
8709c0446d6SStefano Zampini   for (i=0;i<pcbddc->n_ISForDofs;i++) {
8719c0446d6SStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofs[i]);CHKERRQ(ierr);
8729c0446d6SStefano Zampini   }
873d11ae9bbSstefano_zampini   ierr = PetscFree(pcbddc->ISForDofs);CHKERRQ(ierr);
87463602bcaSStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
87563602bcaSStefano Zampini   for (i=0;i<pcbddc->n_ISForDofsLocal;i++) {
87663602bcaSStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofsLocal[i]);CHKERRQ(ierr);
87763602bcaSStefano Zampini   }
87863602bcaSStefano Zampini   ierr = PetscFree(pcbddc->ISForDofsLocal);CHKERRQ(ierr);
87963602bcaSStefano Zampini   pcbddc->n_ISForDofsLocal = 0;
880da1bb401SStefano Zampini   /* allocate space then set */
881d02579f5SStefano Zampini   if (n_is) {
882785e854fSJed Brown     ierr = PetscMalloc1(n_is,&pcbddc->ISForDofs);CHKERRQ(ierr);
883d02579f5SStefano Zampini   }
8849c0446d6SStefano Zampini   for (i=0;i<n_is;i++) {
885da1bb401SStefano Zampini     ierr = PetscObjectReference((PetscObject)ISForDofs[i]);CHKERRQ(ierr);
886da1bb401SStefano Zampini     pcbddc->ISForDofs[i]=ISForDofs[i];
8879c0446d6SStefano Zampini   }
8889c0446d6SStefano Zampini   pcbddc->n_ISForDofs=n_is;
88963602bcaSStefano Zampini   if (n_is) pcbddc->user_provided_isfordofs = PETSC_TRUE;
8901a8a16d1SStefano Zampini   pcbddc->recompute_topography = PETSC_TRUE;
8919c0446d6SStefano Zampini   PetscFunctionReturn(0);
8929c0446d6SStefano Zampini }
8931e6b0712SBarry Smith 
8949c0446d6SStefano Zampini #undef __FUNCT__
8959c0446d6SStefano Zampini #define __FUNCT__ "PCBDDCSetDofsSplitting"
8969c0446d6SStefano Zampini /*@
89763602bcaSStefano Zampini  PCBDDCSetDofsSplitting - Set index sets defining fields of the global matrix
8989c0446d6SStefano Zampini 
89963602bcaSStefano Zampini    Collective
9009c0446d6SStefano Zampini 
9019c0446d6SStefano Zampini    Input Parameters:
9029c0446d6SStefano Zampini +  pc - the preconditioning context
9030f202f7eSStefano Zampini .  n_is - number of index sets defining the fields
9040f202f7eSStefano Zampini -  ISForDofs - array of IS describing the fields in global ordering
9059c0446d6SStefano Zampini 
9069c0446d6SStefano Zampini    Level: intermediate
9079c0446d6SStefano Zampini 
9080f202f7eSStefano Zampini    Notes:
9090f202f7eSStefano Zampini      Any process can list any global node. Not all nodes need to be listed: unlisted nodes will belong to the complement field.
9109c0446d6SStefano Zampini 
9119c0446d6SStefano Zampini .seealso: PCBDDC
9129c0446d6SStefano Zampini @*/
9139c0446d6SStefano Zampini PetscErrorCode PCBDDCSetDofsSplitting(PC pc,PetscInt n_is, IS ISForDofs[])
9149c0446d6SStefano Zampini {
9152b510759SStefano Zampini   PetscInt       i;
9169c0446d6SStefano Zampini   PetscErrorCode ierr;
9179c0446d6SStefano Zampini 
9189c0446d6SStefano Zampini   PetscFunctionBegin;
9199c0446d6SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
92063602bcaSStefano Zampini   PetscValidLogicalCollectiveInt(pc,n_is,2);
9212b510759SStefano Zampini   for (i=0;i<n_is;i++) {
92263602bcaSStefano Zampini     PetscCheckSameComm(pc,1,ISForDofs[i],3);
92363602bcaSStefano Zampini     PetscValidHeaderSpecific(ISForDofs[i],IS_CLASSID,3);
9242b510759SStefano Zampini   }
9259c0446d6SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDofsSplitting_C",(PC,PetscInt,IS[]),(pc,n_is,ISForDofs));CHKERRQ(ierr);
9269c0446d6SStefano Zampini   PetscFunctionReturn(0);
9279c0446d6SStefano Zampini }
928906d46d4SStefano Zampini 
929da1bb401SStefano Zampini /* -------------------------------------------------------------------------- */
930534831adSStefano Zampini #undef __FUNCT__
931534831adSStefano Zampini #define __FUNCT__ "PCPreSolve_BDDC"
932534831adSStefano Zampini /* -------------------------------------------------------------------------- */
933534831adSStefano Zampini /*
934534831adSStefano Zampini    PCPreSolve_BDDC - Changes the right hand side and (if necessary) the initial
935534831adSStefano Zampini                      guess if a transformation of basis approach has been selected.
9369c0446d6SStefano Zampini 
937534831adSStefano Zampini    Input Parameter:
938534831adSStefano Zampini +  pc - the preconditioner contex
939534831adSStefano Zampini 
940534831adSStefano Zampini    Application Interface Routine: PCPreSolve()
941534831adSStefano Zampini 
942534831adSStefano Zampini    Notes:
943534831adSStefano Zampini      The interface routine PCPreSolve() is not usually called directly by
944534831adSStefano Zampini    the user, but instead is called by KSPSolve().
945534831adSStefano Zampini */
946534831adSStefano Zampini static PetscErrorCode PCPreSolve_BDDC(PC pc, KSP ksp, Vec rhs, Vec x)
947534831adSStefano Zampini {
948534831adSStefano Zampini   PetscErrorCode ierr;
949534831adSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
950534831adSStefano Zampini   PC_IS          *pcis = (PC_IS*)(pc->data);
9513972b0daSStefano Zampini   Vec            used_vec;
9528d00608fSStefano Zampini   PetscBool      copy_rhs = PETSC_TRUE;
953534831adSStefano Zampini 
954534831adSStefano Zampini   PetscFunctionBegin;
95585c4d303SStefano Zampini   /* if we are working with cg, one dirichlet solve can be avoided during Krylov iterations */
95685c4d303SStefano Zampini   if (ksp) {
95785c4d303SStefano Zampini     PetscBool iscg;
95885c4d303SStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)ksp,KSPCG,&iscg);CHKERRQ(ierr);
95985c4d303SStefano Zampini     if (!iscg) {
96085c4d303SStefano Zampini       ierr = PCBDDCSetUseExactDirichlet(pc,PETSC_FALSE);CHKERRQ(ierr);
96185c4d303SStefano Zampini     }
96285c4d303SStefano Zampini   }
96385c4d303SStefano Zampini   /* Creates parallel work vectors used in presolve */
96462a6ff1dSStefano Zampini   if (!pcbddc->original_rhs) {
96562a6ff1dSStefano Zampini     ierr = VecDuplicate(pcis->vec1_global,&pcbddc->original_rhs);CHKERRQ(ierr);
96662a6ff1dSStefano Zampini   }
96762a6ff1dSStefano Zampini   if (!pcbddc->temp_solution) {
96862a6ff1dSStefano Zampini     ierr = VecDuplicate(pcis->vec1_global,&pcbddc->temp_solution);CHKERRQ(ierr);
96962a6ff1dSStefano Zampini   }
9708d00608fSStefano Zampini 
9713972b0daSStefano Zampini   if (x) {
9723972b0daSStefano Zampini     ierr = PetscObjectReference((PetscObject)x);CHKERRQ(ierr);
9733972b0daSStefano Zampini     used_vec = x;
9748d00608fSStefano Zampini   } else { /* it can only happen when calling PCBDDCMatFETIDPGetRHS */
9753972b0daSStefano Zampini     ierr = PetscObjectReference((PetscObject)pcbddc->temp_solution);CHKERRQ(ierr);
9763972b0daSStefano Zampini     used_vec = pcbddc->temp_solution;
9773972b0daSStefano Zampini     ierr = VecSet(used_vec,0.0);CHKERRQ(ierr);
9783972b0daSStefano Zampini   }
9798efcfb23SStefano Zampini 
9808efcfb23SStefano Zampini   /* hack into ksp data structure since PCPreSolve comes earlier than setting to zero the guess in src/ksp/ksp/interface/itfunc.c */
9813972b0daSStefano Zampini   if (ksp) {
982a0cb1b98SStefano Zampini     /* store the flag for the initial guess since it will be restored back during PCPostSolve_BDDC */
9838efcfb23SStefano Zampini     ierr = KSPGetInitialGuessNonzero(ksp,&pcbddc->ksp_guess_nonzero);CHKERRQ(ierr);
9848efcfb23SStefano Zampini     if (!pcbddc->ksp_guess_nonzero) {
9853972b0daSStefano Zampini       ierr = VecSet(used_vec,0.0);CHKERRQ(ierr);
9863972b0daSStefano Zampini     }
9873972b0daSStefano Zampini   }
9883308cffdSStefano Zampini 
9898d00608fSStefano Zampini   pcbddc->rhs_change = PETSC_FALSE;
9903972b0daSStefano Zampini   /* Take into account zeroed rows -> change rhs and store solution removed */
991a07ea27aSStefano Zampini   if (rhs) {
9923975b054SStefano Zampini     IS dirIS = NULL;
9933975b054SStefano Zampini 
994a07ea27aSStefano Zampini     /* DirichletBoundariesLocal may not be consistent among neighbours; gets a dirichlet dofs IS from graph (may be cached) */
9953975b054SStefano Zampini     ierr = PCBDDCGraphGetDirichletDofs(pcbddc->mat_graph,&dirIS);CHKERRQ(ierr);
9963975b054SStefano Zampini     if (dirIS) {
997906d46d4SStefano Zampini       Mat_IS            *matis = (Mat_IS*)pc->pmat->data;
998785d1243SStefano Zampini       PetscInt          dirsize,i,*is_indices;
9992b095fd8SStefano Zampini       PetscScalar       *array_x;
10002b095fd8SStefano Zampini       const PetscScalar *array_diagonal;
1001785d1243SStefano Zampini 
10023972b0daSStefano Zampini       ierr = MatGetDiagonal(pc->pmat,pcis->vec1_global);CHKERRQ(ierr);
10033972b0daSStefano Zampini       ierr = VecPointwiseDivide(pcis->vec1_global,rhs,pcis->vec1_global);CHKERRQ(ierr);
1004e176bc59SStefano Zampini       ierr = VecScatterBegin(matis->rctx,pcis->vec1_global,pcis->vec2_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1005e176bc59SStefano Zampini       ierr = VecScatterEnd(matis->rctx,pcis->vec1_global,pcis->vec2_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1006e176bc59SStefano Zampini       ierr = VecScatterBegin(matis->rctx,used_vec,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1007e176bc59SStefano Zampini       ierr = VecScatterEnd(matis->rctx,used_vec,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
100882ba6b80SStefano Zampini       ierr = ISGetLocalSize(dirIS,&dirsize);CHKERRQ(ierr);
10093972b0daSStefano Zampini       ierr = VecGetArray(pcis->vec1_N,&array_x);CHKERRQ(ierr);
10102b095fd8SStefano Zampini       ierr = VecGetArrayRead(pcis->vec2_N,&array_diagonal);CHKERRQ(ierr);
10113972b0daSStefano Zampini       ierr = ISGetIndices(dirIS,(const PetscInt**)&is_indices);CHKERRQ(ierr);
10122fa5cd67SKarl Rupp       for (i=0; i<dirsize; i++) array_x[is_indices[i]] = array_diagonal[is_indices[i]];
10133972b0daSStefano Zampini       ierr = ISRestoreIndices(dirIS,(const PetscInt**)&is_indices);CHKERRQ(ierr);
10142b095fd8SStefano Zampini       ierr = VecRestoreArrayRead(pcis->vec2_N,&array_diagonal);CHKERRQ(ierr);
10153972b0daSStefano Zampini       ierr = VecRestoreArray(pcis->vec1_N,&array_x);CHKERRQ(ierr);
1016e176bc59SStefano Zampini       ierr = VecScatterBegin(matis->rctx,pcis->vec1_N,used_vec,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1017e176bc59SStefano Zampini       ierr = VecScatterEnd(matis->rctx,pcis->vec1_N,used_vec,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
10188d00608fSStefano Zampini       pcbddc->rhs_change = PETSC_TRUE;
10191b968477SStefano Zampini       ierr = ISDestroy(&dirIS);CHKERRQ(ierr);
10208efcfb23SStefano Zampini     }
1021a07ea27aSStefano Zampini   }
1022b76ba322SStefano Zampini 
10238efcfb23SStefano Zampini   /* remove the computed solution or the initial guess from the rhs */
10248d00608fSStefano Zampini   if (pcbddc->rhs_change || (ksp && pcbddc->ksp_guess_nonzero) ) {
10258d00608fSStefano Zampini     /* store the original rhs */
10268d00608fSStefano Zampini     if (copy_rhs) {
10278d00608fSStefano Zampini       ierr = VecCopy(rhs,pcbddc->original_rhs);CHKERRQ(ierr);
10288d00608fSStefano Zampini       copy_rhs = PETSC_FALSE;
10298d00608fSStefano Zampini     }
10308d00608fSStefano Zampini     pcbddc->rhs_change = PETSC_TRUE;
10313972b0daSStefano Zampini     ierr = VecScale(used_vec,-1.0);CHKERRQ(ierr);
10320369aaf7SStefano Zampini     ierr = MatMultAdd(pc->mat,used_vec,rhs,rhs);CHKERRQ(ierr);
10333972b0daSStefano Zampini     ierr = VecScale(used_vec,-1.0);CHKERRQ(ierr);
10348efcfb23SStefano Zampini     ierr = VecCopy(used_vec,pcbddc->temp_solution);CHKERRQ(ierr);
10357acc28cbSStefano Zampini     if (ksp) {
10367acc28cbSStefano Zampini       ierr = KSPSetInitialGuessNonzero(ksp,PETSC_FALSE);CHKERRQ(ierr);
10377acc28cbSStefano Zampini     }
10383308cffdSStefano Zampini   }
10398efcfb23SStefano Zampini   ierr = VecDestroy(&used_vec);CHKERRQ(ierr);
1040b76ba322SStefano Zampini 
10410369aaf7SStefano Zampini   /* When using the benign trick: (TODO: what about FETI-DP?)
10420369aaf7SStefano Zampini      - change rhs on pressures (iteration matrix is surely of type MATIS)
10430369aaf7SStefano Zampini      - compute initial vector in benign space
10440369aaf7SStefano Zampini   */
10450369aaf7SStefano Zampini   if (rhs && pcbddc->benign_saddle_point) {
104606f24817SStefano Zampini     Mat_IS *matis = (Mat_IS*)(pc->mat->data);
104706f24817SStefano Zampini 
104806f24817SStefano Zampini     /* store the original rhs */
104906f24817SStefano Zampini     if (copy_rhs) {
105006f24817SStefano Zampini       ierr = VecCopy(rhs,pcbddc->original_rhs);CHKERRQ(ierr);
105106f24817SStefano Zampini       copy_rhs = PETSC_FALSE;
105206f24817SStefano Zampini     }
105306f24817SStefano Zampini 
105406f24817SStefano Zampini     /* now change (locally) the basis */
105506f24817SStefano Zampini     ierr = VecScatterBegin(matis->rctx,rhs,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
105606f24817SStefano Zampini     ierr = VecScatterEnd(matis->rctx,rhs,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
105706f24817SStefano Zampini     if (pcbddc->benign_change) {
105806f24817SStefano Zampini       ierr = MatMultTranspose(pcbddc->benign_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
105906f24817SStefano Zampini       ierr = VecScatterBegin(matis->rctx,pcis->vec2_N,rhs,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
106006f24817SStefano Zampini       ierr = VecScatterEnd(matis->rctx,pcis->vec2_N,rhs,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
106106f24817SStefano Zampini       /* change local iteration matrix */
106206f24817SStefano Zampini       ierr = MatPtAP(matis->A,pcbddc->benign_change,MAT_REUSE_MATRIX,2.0,&pcbddc->local_mat);CHKERRQ(ierr);
106306f24817SStefano Zampini       ierr = MatDestroy(&pcbddc->benign_original_mat);CHKERRQ(ierr);
106406f24817SStefano Zampini       ierr = PetscObjectReference((PetscObject)matis->A);CHKERRQ(ierr);
106506f24817SStefano Zampini       pcbddc->benign_original_mat = matis->A;
106606f24817SStefano Zampini       ierr = MatDestroy(&matis->A);CHKERRQ(ierr);
106706f24817SStefano Zampini       ierr = PetscObjectReference((PetscObject)pcbddc->local_mat);CHKERRQ(ierr);
106806f24817SStefano Zampini       matis->A = pcbddc->local_mat;
106906f24817SStefano Zampini       ierr = MatDestroy(&pcbddc->local_mat);CHKERRQ(ierr);
107006f24817SStefano Zampini     } else {
107106f24817SStefano Zampini       ierr = VecScatterBegin(matis->rctx,pcis->vec1_N,rhs,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
107206f24817SStefano Zampini       ierr = VecScatterEnd(matis->rctx,pcis->vec1_N,rhs,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
107306f24817SStefano Zampini     }
107406f24817SStefano Zampini     pcbddc->rhs_change = PETSC_TRUE;
107506f24817SStefano Zampini 
10760369aaf7SStefano Zampini     /* compute u^*_h as in Xuemin Tu's thesis (see Section 4.8.1) */
10770369aaf7SStefano Zampini     /* TODO: what about Stokes? */
10780369aaf7SStefano Zampini     if (!pcbddc->benign_vec) {
10790369aaf7SStefano Zampini       ierr = VecDuplicate(rhs,&pcbddc->benign_vec);CHKERRQ(ierr);
10800369aaf7SStefano Zampini     }
10810369aaf7SStefano Zampini     ierr = VecSet(pcis->vec1_global,0.);CHKERRQ(ierr);
10820369aaf7SStefano Zampini     pcbddc->benign_p0 = 0.;
10830369aaf7SStefano Zampini     if (pcbddc->benign_p0_lidx >= 0) {
10840369aaf7SStefano Zampini       const PetscScalar *array;
10850369aaf7SStefano Zampini 
10860369aaf7SStefano Zampini       ierr = VecGetArrayRead(pcis->vec2_N,&array);CHKERRQ(ierr);
10870369aaf7SStefano Zampini       pcbddc->benign_p0 = array[pcbddc->benign_p0_lidx];
10880369aaf7SStefano Zampini       ierr = VecRestoreArrayRead(pcis->vec2_N,&array);CHKERRQ(ierr);
10890369aaf7SStefano Zampini     }
10900369aaf7SStefano Zampini     ierr = PCBDDCBenignPopOrPushP0(pc,pcis->vec1_global,PETSC_FALSE);CHKERRQ(ierr);
10910369aaf7SStefano Zampini     ierr = PCApply_BDDC(pc,pcis->vec1_global,pcbddc->benign_vec);CHKERRQ(ierr);
10920369aaf7SStefano Zampini     pcbddc->benign_p0 = 0.;
10930369aaf7SStefano Zampini     ierr = PCBDDCBenignPopOrPushP0(pc,pcbddc->benign_vec,PETSC_FALSE);CHKERRQ(ierr);
10940369aaf7SStefano Zampini     if (pcbddc->benign_saddle_point) {
10950369aaf7SStefano Zampini       Mat_IS* matis = (Mat_IS*)(pc->mat->data);
10960369aaf7SStefano Zampini       ierr = VecScatterBegin(matis->rctx,pcbddc->benign_vec,matis->x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
10970369aaf7SStefano Zampini       ierr = VecScatterEnd(matis->rctx,pcbddc->benign_vec,matis->x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1098b76ba322SStefano Zampini     }
1099b76ba322SStefano Zampini   }
1100b76ba322SStefano Zampini 
11010369aaf7SStefano Zampini   /* change rhs and iteration matrix if using the change of basis */
1102b9b85e73SStefano Zampini   if (pcbddc->ChangeOfBasisMatrix) {
1103906d46d4SStefano Zampini     PCBDDCChange_ctx change_ctx;
1104906d46d4SStefano Zampini 
1105906d46d4SStefano Zampini     /* get change ctx */
1106906d46d4SStefano Zampini     ierr = MatShellGetContext(pcbddc->new_global_mat,&change_ctx);CHKERRQ(ierr);
1107906d46d4SStefano Zampini 
1108906d46d4SStefano Zampini     /* set current iteration matrix inside change context (change of basis has been already set into the ctx during PCSetUp) */
1109906d46d4SStefano Zampini     ierr = MatDestroy(&change_ctx->original_mat);CHKERRQ(ierr);
1110906d46d4SStefano Zampini     ierr = PetscObjectReference((PetscObject)pc->mat);CHKERRQ(ierr);
1111906d46d4SStefano Zampini     change_ctx->original_mat = pc->mat;
1112906d46d4SStefano Zampini 
1113906d46d4SStefano Zampini     /* change iteration matrix */
1114906d46d4SStefano Zampini     ierr = MatDestroy(&pc->mat);CHKERRQ(ierr);
1115906d46d4SStefano Zampini     ierr = PetscObjectReference((PetscObject)pcbddc->new_global_mat);CHKERRQ(ierr);
1116906d46d4SStefano Zampini     pc->mat = pcbddc->new_global_mat;
1117906d46d4SStefano Zampini 
11188d00608fSStefano Zampini     /* store the original rhs */
11198d00608fSStefano Zampini     if (copy_rhs) {
11208d00608fSStefano Zampini       ierr = VecCopy(rhs,pcbddc->original_rhs);CHKERRQ(ierr);
11218d00608fSStefano Zampini       copy_rhs = PETSC_FALSE;
11228d00608fSStefano Zampini     }
11238d00608fSStefano Zampini 
1124906d46d4SStefano Zampini     /* change rhs */
1125906d46d4SStefano Zampini     ierr = MatMultTranspose(change_ctx->global_change,rhs,pcis->vec1_global);CHKERRQ(ierr);
1126906d46d4SStefano Zampini     ierr = VecCopy(pcis->vec1_global,rhs);CHKERRQ(ierr);
11278d00608fSStefano Zampini     pcbddc->rhs_change = PETSC_TRUE;
112892e3dcfbSStefano Zampini   }
112992e3dcfbSStefano Zampini 
11300369aaf7SStefano Zampini   /* remove non-benign solution from the rhs */
11310369aaf7SStefano Zampini   if (pcbddc->benign_saddle_point) {
11320369aaf7SStefano Zampini     /* store the original rhs */
11330369aaf7SStefano Zampini     if (copy_rhs) {
11340369aaf7SStefano Zampini       ierr = VecCopy(rhs,pcbddc->original_rhs);CHKERRQ(ierr);
11350369aaf7SStefano Zampini       copy_rhs = PETSC_FALSE;
11360369aaf7SStefano Zampini     }
11370369aaf7SStefano Zampini     ierr = VecScale(pcbddc->benign_vec,-1.0);CHKERRQ(ierr);
11380369aaf7SStefano Zampini     ierr = MatMultAdd(pc->mat,pcbddc->benign_vec,rhs,rhs);CHKERRQ(ierr);
11390369aaf7SStefano Zampini     pcbddc->rhs_change = PETSC_TRUE;
11400369aaf7SStefano Zampini   }
11410369aaf7SStefano Zampini 
11420369aaf7SStefano Zampini   /* set initial guess if using PCG */
11430369aaf7SStefano Zampini   if (x && pcbddc->use_exact_dirichlet_trick) {
11440369aaf7SStefano Zampini     ierr = VecSet(x,0.0);CHKERRQ(ierr);
11450369aaf7SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,rhs,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
11460369aaf7SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,rhs,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
11470369aaf7SStefano Zampini     ierr = KSPSolve(pcbddc->ksp_D,pcis->vec1_D,pcis->vec2_D);CHKERRQ(ierr);
11480369aaf7SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,x,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
11490369aaf7SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,pcis->vec2_D,x,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
11500369aaf7SStefano Zampini     if (ksp) {
11510369aaf7SStefano Zampini       ierr = KSPSetInitialGuessNonzero(ksp,PETSC_TRUE);CHKERRQ(ierr);
11520369aaf7SStefano Zampini     }
11530369aaf7SStefano Zampini   }
11540369aaf7SStefano Zampini 
115592e3dcfbSStefano Zampini   /* remove nullspace if present */
11568efcfb23SStefano Zampini   if (ksp && x && pcbddc->NullSpace) {
11578efcfb23SStefano Zampini     ierr = MatNullSpaceRemove(pcbddc->NullSpace,x);CHKERRQ(ierr);
11588d00608fSStefano Zampini     /* store the original rhs */
11598d00608fSStefano Zampini     if (copy_rhs) {
11608d00608fSStefano Zampini       ierr = VecCopy(rhs,pcbddc->original_rhs);CHKERRQ(ierr);
11618d00608fSStefano Zampini       copy_rhs = PETSC_FALSE;
11628d00608fSStefano Zampini     }
11638d00608fSStefano Zampini     pcbddc->rhs_change = PETSC_TRUE;
1164d0195637SJed Brown     ierr = MatNullSpaceRemove(pcbddc->NullSpace,rhs);CHKERRQ(ierr);
1165b76ba322SStefano Zampini   }
1166534831adSStefano Zampini   PetscFunctionReturn(0);
1167534831adSStefano Zampini }
1168906d46d4SStefano Zampini 
1169534831adSStefano Zampini /* -------------------------------------------------------------------------- */
1170534831adSStefano Zampini #undef __FUNCT__
1171534831adSStefano Zampini #define __FUNCT__ "PCPostSolve_BDDC"
1172534831adSStefano Zampini /* -------------------------------------------------------------------------- */
1173534831adSStefano Zampini /*
1174534831adSStefano Zampini    PCPostSolve_BDDC - Changes the computed solution if a transformation of basis
1175534831adSStefano Zampini                      approach has been selected. Also, restores rhs to its original state.
1176534831adSStefano Zampini 
1177534831adSStefano Zampini    Input Parameter:
1178534831adSStefano Zampini +  pc - the preconditioner contex
1179534831adSStefano Zampini 
1180534831adSStefano Zampini    Application Interface Routine: PCPostSolve()
1181534831adSStefano Zampini 
1182534831adSStefano Zampini    Notes:
1183534831adSStefano Zampini      The interface routine PCPostSolve() is not usually called directly by
1184534831adSStefano Zampini      the user, but instead is called by KSPSolve().
1185534831adSStefano Zampini */
1186534831adSStefano Zampini static PetscErrorCode PCPostSolve_BDDC(PC pc, KSP ksp, Vec rhs, Vec x)
1187534831adSStefano Zampini {
1188534831adSStefano Zampini   PetscErrorCode ierr;
1189534831adSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
1190534831adSStefano Zampini 
1191534831adSStefano Zampini   PetscFunctionBegin;
1192b9b85e73SStefano Zampini   if (pcbddc->ChangeOfBasisMatrix) {
1193906d46d4SStefano Zampini     PCBDDCChange_ctx change_ctx;
1194906d46d4SStefano Zampini 
1195906d46d4SStefano Zampini     /* get change ctx */
1196906d46d4SStefano Zampini     ierr = MatShellGetContext(pcbddc->new_global_mat,&change_ctx);CHKERRQ(ierr);
1197906d46d4SStefano Zampini 
1198906d46d4SStefano Zampini     /* restore iteration matrix */
1199906d46d4SStefano Zampini     ierr = MatDestroy(&pc->mat);CHKERRQ(ierr);
1200906d46d4SStefano Zampini     ierr = PetscObjectReference((PetscObject)change_ctx->original_mat);CHKERRQ(ierr);
1201906d46d4SStefano Zampini     pc->mat = change_ctx->original_mat;
1202906d46d4SStefano Zampini 
12038666afb4SStefano Zampini     /* need to restore the local matrices */
12048666afb4SStefano Zampini     if (pcbddc->benign_saddle_point && pcbddc->benign_change) {
12058666afb4SStefano Zampini       Mat_IS *matis = (Mat_IS*)pc->mat->data;
12068666afb4SStefano Zampini 
12078666afb4SStefano Zampini       ierr = MatDestroy(&matis->A);CHKERRQ(ierr);
12088666afb4SStefano Zampini       ierr = PetscObjectReference((PetscObject)pcbddc->benign_original_mat);CHKERRQ(ierr);
12098666afb4SStefano Zampini       matis->A = pcbddc->benign_original_mat;
12108666afb4SStefano Zampini       ierr = MatDestroy(&pcbddc->benign_original_mat);CHKERRQ(ierr);
12118666afb4SStefano Zampini     }
12128666afb4SStefano Zampini 
1213906d46d4SStefano Zampini     /* get solution in original basis */
1214906d46d4SStefano Zampini     if (x) {
1215906d46d4SStefano Zampini       PC_IS *pcis = (PC_IS*)(pc->data);
121606f24817SStefano Zampini 
12178666afb4SStefano Zampini 
12182d3346b4SStefano Zampini       /* restore solution on pressures */
121906a4e24aSStefano Zampini       if (pcbddc->benign_saddle_point) {
12202d3346b4SStefano Zampini         Mat_IS *matis = (Mat_IS*)pc->mat->data;
12212d3346b4SStefano Zampini 
12220369aaf7SStefano Zampini         /* add non-benign solution */
12238666afb4SStefano Zampini         ierr = VecAXPY(x,-1.0,pcbddc->benign_vec);CHKERRQ(ierr);
12240369aaf7SStefano Zampini 
12250369aaf7SStefano Zampini         /* change basis on pressures for x */
122606f24817SStefano Zampini         ierr = VecScatterBegin(matis->rctx,x,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
122706f24817SStefano Zampini         ierr = VecScatterEnd(matis->rctx,x,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
12282d3346b4SStefano Zampini         if (pcbddc->benign_change) {
12292d3346b4SStefano Zampini 
12302d3346b4SStefano Zampini           ierr = MatMult(pcbddc->benign_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
123106f24817SStefano Zampini           ierr = VecScatterBegin(matis->rctx,pcis->vec2_N,x,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
123206f24817SStefano Zampini           ierr = VecScatterEnd(matis->rctx,pcis->vec2_N,x,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
12332d3346b4SStefano Zampini         } else {
123406f24817SStefano Zampini           ierr = VecScatterBegin(matis->rctx,pcis->vec1_N,x,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
123506f24817SStefano Zampini           ierr = VecScatterEnd(matis->rctx,pcis->vec1_N,x,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
12362d3346b4SStefano Zampini         }
12372d3346b4SStefano Zampini       }
12380369aaf7SStefano Zampini       /* change basis on x */
12390369aaf7SStefano Zampini       ierr = MatMult(change_ctx->global_change,x,pcis->vec1_global);CHKERRQ(ierr);
1240906d46d4SStefano Zampini       ierr = VecCopy(pcis->vec1_global,x);CHKERRQ(ierr);
12413425bc38SStefano Zampini     }
1242534831adSStefano Zampini   }
1243906d46d4SStefano Zampini 
12443972b0daSStefano Zampini   /* add solution removed in presolve */
12456bcfc461SStefano Zampini   if (x && pcbddc->rhs_change) {
12463425bc38SStefano Zampini     ierr = VecAXPY(x,1.0,pcbddc->temp_solution);CHKERRQ(ierr);
12473425bc38SStefano Zampini   }
1248906d46d4SStefano Zampini 
1249fb223d50SStefano Zampini   /* restore rhs to its original state */
12508d00608fSStefano Zampini   if (rhs && pcbddc->rhs_change) {
1251fb223d50SStefano Zampini     ierr = VecCopy(pcbddc->original_rhs,rhs);CHKERRQ(ierr);
1252fb223d50SStefano Zampini   }
12538d00608fSStefano Zampini   pcbddc->rhs_change = PETSC_FALSE;
12548efcfb23SStefano Zampini 
12558efcfb23SStefano Zampini   /* restore ksp guess state */
12568efcfb23SStefano Zampini   if (ksp) {
12578efcfb23SStefano Zampini     ierr = KSPSetInitialGuessNonzero(ksp,pcbddc->ksp_guess_nonzero);CHKERRQ(ierr);
12588efcfb23SStefano Zampini   }
1259534831adSStefano Zampini   PetscFunctionReturn(0);
1260534831adSStefano Zampini }
1261534831adSStefano Zampini /* -------------------------------------------------------------------------- */
126253cdbc3dSStefano Zampini #undef __FUNCT__
126353cdbc3dSStefano Zampini #define __FUNCT__ "PCSetUp_BDDC"
12640c7d97c5SJed Brown /* -------------------------------------------------------------------------- */
12650c7d97c5SJed Brown /*
12660c7d97c5SJed Brown    PCSetUp_BDDC - Prepares for the use of the BDDC preconditioner
12670c7d97c5SJed Brown                   by setting data structures and options.
12680c7d97c5SJed Brown 
12690c7d97c5SJed Brown    Input Parameter:
127053cdbc3dSStefano Zampini +  pc - the preconditioner context
12710c7d97c5SJed Brown 
12720c7d97c5SJed Brown    Application Interface Routine: PCSetUp()
12730c7d97c5SJed Brown 
12740c7d97c5SJed Brown    Notes:
12750c7d97c5SJed Brown      The interface routine PCSetUp() is not usually called directly by
12760c7d97c5SJed Brown      the user, but instead is called by PCApply() if necessary.
12770c7d97c5SJed Brown */
127853cdbc3dSStefano Zampini PetscErrorCode PCSetUp_BDDC(PC pc)
12790c7d97c5SJed Brown {
12800c7d97c5SJed Brown   PetscErrorCode ierr;
12810c7d97c5SJed Brown   PC_BDDC*       pcbddc = (PC_BDDC*)pc->data;
12825e8657edSStefano Zampini   Mat_IS*        matis;
128308122e43SStefano Zampini   MatNullSpace   nearnullspace;
1284c9ed8603SStefano Zampini   IS             zerodiag = NULL;
128591e8d312SStefano Zampini   PetscInt       nrows,ncols;
128608122e43SStefano Zampini   PetscBool      computetopography,computesolvers,computesubschurs;
12878de1fae6SStefano Zampini   PetscBool      computeconstraintsmatrix;
12885e8657edSStefano Zampini   PetscBool      new_nearnullspace_provided,ismatis;
12890c7d97c5SJed Brown 
12900c7d97c5SJed Brown   PetscFunctionBegin;
12915e8657edSStefano Zampini   ierr = PetscObjectTypeCompare((PetscObject)pc->pmat,MATIS,&ismatis);CHKERRQ(ierr);
12925e8657edSStefano Zampini   if (!ismatis) {
12935e8657edSStefano Zampini     SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_ARG_WRONG,"PCBDDC preconditioner requires matrix of type MATIS");
12945e8657edSStefano Zampini   }
129591e8d312SStefano Zampini   ierr = MatGetSize(pc->pmat,&nrows,&ncols);CHKERRQ(ierr);
129691e8d312SStefano Zampini   if (nrows != ncols) {
129791e8d312SStefano Zampini     SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"PCBDDC preconditioner requires a square preconditioning matrix");
129891e8d312SStefano Zampini   }
12995e8657edSStefano Zampini   matis = (Mat_IS*)pc->pmat->data;
1300f4ddd8eeSStefano Zampini   /* the following lines of code should be replaced by a better logic between PCIS, PCNN, PCBDDC and other future nonoverlapping preconditioners */
13013b03a366Sstefano_zampini   /* For BDDC we need to define a local "Neumann" problem different to that defined in PCISSetup
1302fcd409f5SStefano Zampini      Also, BDDC directly build the Dirichlet problem */
1303f4ddd8eeSStefano Zampini   /* split work */
1304674ae819SStefano Zampini   if (pc->setupcalled) {
1305d1e9a80fSBarry Smith     if (pc->flag == SAME_NONZERO_PATTERN) {
1306674ae819SStefano Zampini       computetopography = PETSC_FALSE;
1307674ae819SStefano Zampini       computesolvers = PETSC_TRUE;
1308674ae819SStefano Zampini     } else { /* DIFFERENT_NONZERO_PATTERN */
1309674ae819SStefano Zampini       computetopography = PETSC_TRUE;
1310674ae819SStefano Zampini       computesolvers = PETSC_TRUE;
1311674ae819SStefano Zampini     }
1312674ae819SStefano Zampini   } else {
1313674ae819SStefano Zampini     computetopography = PETSC_TRUE;
1314674ae819SStefano Zampini     computesolvers = PETSC_TRUE;
1315674ae819SStefano Zampini   }
1316fb180af4SStefano Zampini   if (pcbddc->recompute_topography) {
1317fb180af4SStefano Zampini     computetopography = PETSC_TRUE;
1318fb180af4SStefano Zampini   }
13198de1fae6SStefano Zampini   computeconstraintsmatrix = PETSC_FALSE;
1320b087196eSStefano Zampini 
1321b087196eSStefano Zampini   /* check parameters' compatibility */
13225a95e1ceSStefano Zampini   if (pcbddc->adaptive_threshold > 0.0 && !pcbddc->use_deluxe_scaling) {
13235a95e1ceSStefano Zampini     SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Cannot compute adaptive constraints without deluxe scaling. Rerun with -pc_bddc_use_deluxe_scaling");
13245a95e1ceSStefano Zampini   }
13255a95e1ceSStefano Zampini   pcbddc->adaptive_selection = (PetscBool)(pcbddc->adaptive_threshold > 0.0 && pcbddc->use_deluxe_scaling);
1326862806e4SStefano Zampini   if (pcbddc->adaptive_selection) pcbddc->use_faces = PETSC_TRUE;
1327862806e4SStefano Zampini 
13285a95e1ceSStefano Zampini   computesubschurs = (PetscBool)(pcbddc->adaptive_selection || pcbddc->use_deluxe_scaling);
13296816873aSStefano Zampini   if (pcbddc->faster_deluxe && pcbddc->adaptive_selection && pcbddc->use_change_of_basis) {
13306816873aSStefano Zampini     SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Cannot compute faster deluxe if adaptivity and change of basis are both requested. Rerun with -pc_bddc_deluxe_faster false");
13316816873aSStefano Zampini   }
13322d3346b4SStefano Zampini 
13332d3346b4SStefano Zampini   /* check if the iteration matrix is of type MATIS in case the benign trick has been requested */
13342d3346b4SStefano Zampini   ierr = PetscObjectTypeCompare((PetscObject)pc->mat,MATIS,&ismatis);CHKERRQ(ierr);
133506a4e24aSStefano Zampini   if (pcbddc->benign_saddle_point && !ismatis) {
13362d3346b4SStefano Zampini     SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_ARG_WRONG,"PCBDDC preconditioner with benign subspace trick requires the iteration matrix to be of type MATIS");
13372d3346b4SStefano Zampini   }
13382d3346b4SStefano Zampini 
1339f4ddd8eeSStefano Zampini   /* Get stdout for dbg */
134070cf5478SStefano Zampini   if (pcbddc->dbg_flag) {
134170cf5478SStefano Zampini     if (!pcbddc->dbg_viewer) {
134258a03d70SStefano Zampini       pcbddc->dbg_viewer = PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)pc));
1343f4ddd8eeSStefano Zampini       ierr = PetscViewerASCIISynchronizedAllow(pcbddc->dbg_viewer,PETSC_TRUE);CHKERRQ(ierr);
1344f4ddd8eeSStefano Zampini     }
134558a03d70SStefano Zampini     ierr = PetscViewerASCIIAddTab(pcbddc->dbg_viewer,2*pcbddc->current_level);CHKERRQ(ierr);
1346f4ddd8eeSStefano Zampini   }
1347f4ddd8eeSStefano Zampini 
13485e8657edSStefano Zampini   if (pcbddc->user_ChangeOfBasisMatrix) {
13495e8657edSStefano Zampini     /* use_change_of_basis flag is used to automatically compute a change of basis from constraints */
13505e8657edSStefano Zampini     pcbddc->use_change_of_basis = PETSC_FALSE;
13515e8657edSStefano Zampini     ierr = PCBDDCComputeLocalMatrix(pc,pcbddc->user_ChangeOfBasisMatrix);CHKERRQ(ierr);
13525e8657edSStefano Zampini   } else {
1353b96c3477SStefano Zampini     ierr = MatDestroy(&pcbddc->local_mat);CHKERRQ(ierr);
13545e8657edSStefano Zampini     ierr = PetscObjectReference((PetscObject)matis->A);CHKERRQ(ierr);
13555e8657edSStefano Zampini     pcbddc->local_mat = matis->A;
1356*d16cbb6bSStefano Zampini   }
1357*d16cbb6bSStefano Zampini 
1358*d16cbb6bSStefano Zampini   /* change basis on local pressures (aka zerodiag dofs) */
1359*d16cbb6bSStefano Zampini   if (pcbddc->benign_saddle_point) {
136081d14e9dSStefano Zampini     PetscInt  nz;
136181d14e9dSStefano Zampini     PetscBool sorted;
1362f5fd1fbfSStefano Zampini 
1363*d16cbb6bSStefano Zampini     /* get reference to mat */
1364*d16cbb6bSStefano Zampini     ierr = MatDestroy(&pcbddc->benign_original_mat);CHKERRQ(ierr);
1365*d16cbb6bSStefano Zampini     ierr = PetscObjectReference((PetscObject)pcbddc->local_mat);CHKERRQ(ierr);
1366*d16cbb6bSStefano Zampini     pcbddc->benign_original_mat = pcbddc->local_mat;
1367*d16cbb6bSStefano Zampini 
1368*d16cbb6bSStefano Zampini     ierr = MatFindZeroDiagonals(pcbddc->benign_original_mat,&zerodiag);CHKERRQ(ierr);
1369c9ed8603SStefano Zampini     ierr = ISSorted(zerodiag,&sorted);CHKERRQ(ierr);
137081d14e9dSStefano Zampini     if (!sorted) {
1371c9ed8603SStefano Zampini       ierr = ISSort(zerodiag);CHKERRQ(ierr);
1372f5fd1fbfSStefano Zampini     }
1373c9ed8603SStefano Zampini     ierr = ISGetLocalSize(zerodiag,&nz);CHKERRQ(ierr);
137481d14e9dSStefano Zampini     if (nz) {
137581d14e9dSStefano Zampini       IS                zerodiagc;
137681d14e9dSStefano Zampini       PetscScalar       *array;
1377c263805aSStefano Zampini       const PetscInt    *idxs,*idxsc;
1378c263805aSStefano Zampini       PetscInt          i,n,*nnz;
137981d14e9dSStefano Zampini 
1380*d16cbb6bSStefano Zampini       /* TODO: add check for shared dofs and raise error */
1381*d16cbb6bSStefano Zampini       ierr = MatGetLocalSize(pcbddc->benign_original_mat,&n,NULL);CHKERRQ(ierr);
1382c9ed8603SStefano Zampini       ierr = ISComplement(zerodiag,0,n,&zerodiagc);CHKERRQ(ierr);
1383c9ed8603SStefano Zampini       ierr = ISGetIndices(zerodiag,&idxs);CHKERRQ(ierr);
138481d14e9dSStefano Zampini       ierr = ISGetIndices(zerodiagc,&idxsc);CHKERRQ(ierr);
138581d14e9dSStefano Zampini       /* local change of basis for pressures */
138681d14e9dSStefano Zampini       ierr = MatDestroy(&pcbddc->benign_change);CHKERRQ(ierr);
1387*d16cbb6bSStefano Zampini       ierr = MatCreate(PetscObjectComm((PetscObject)pcbddc->benign_original_mat),&pcbddc->benign_change);CHKERRQ(ierr);
138881d14e9dSStefano Zampini       ierr = MatSetType(pcbddc->benign_change,MATAIJ);CHKERRQ(ierr);
138981d14e9dSStefano Zampini       ierr = MatSetSizes(pcbddc->benign_change,n,n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
139081d14e9dSStefano Zampini       ierr = PetscMalloc1(n,&nnz);CHKERRQ(ierr);
139181d14e9dSStefano Zampini       for (i=0;i<n-nz;i++) nnz[idxsc[i]] = 1; /* identity on velocities */
139281d14e9dSStefano Zampini       for (i=0;i<nz-1;i++) nnz[idxs[i]] = 2; /* change on pressures */
139381d14e9dSStefano Zampini       nnz[idxs[nz-1]] = nz; /* last local pressure dof: _0 set */
139481d14e9dSStefano Zampini       ierr = MatSeqAIJSetPreallocation(pcbddc->benign_change,0,nnz);CHKERRQ(ierr);
139581d14e9dSStefano Zampini       ierr = PetscFree(nnz);CHKERRQ(ierr);
139681d14e9dSStefano Zampini       /* set identity on velocities */
139781d14e9dSStefano Zampini       for (i=0;i<n-nz;i++) {
139881d14e9dSStefano Zampini         ierr = MatSetValue(pcbddc->benign_change,idxsc[i],idxsc[i],1.,INSERT_VALUES);CHKERRQ(ierr);
139981d14e9dSStefano Zampini       }
140081d14e9dSStefano Zampini       /* set change on pressures */
140181d14e9dSStefano Zampini       for (i=0;i<nz-1;i++) {
140281d14e9dSStefano Zampini         PetscScalar vals[2];
140381d14e9dSStefano Zampini         PetscInt    cols[2];
140481d14e9dSStefano Zampini 
140581d14e9dSStefano Zampini         /* TODO: add quadrature */
140681d14e9dSStefano Zampini         cols[0] = idxs[i];
140781d14e9dSStefano Zampini         cols[1] = idxs[nz-1];
140881d14e9dSStefano Zampini         vals[0] = 1.;
140981d14e9dSStefano Zampini         vals[1] = 1./nz;
141081d14e9dSStefano Zampini         ierr = MatSetValues(pcbddc->benign_change,1,idxs+i,2,cols,vals,INSERT_VALUES);CHKERRQ(ierr);
141181d14e9dSStefano Zampini       }
141281d14e9dSStefano Zampini       ierr = PetscMalloc1(nz,&array);CHKERRQ(ierr);
141381d14e9dSStefano Zampini       for (i=0;i<nz-1;i++) array[i] = -1.;
141481d14e9dSStefano Zampini       array[nz-1] = 1./nz;
141581d14e9dSStefano Zampini       ierr = MatSetValues(pcbddc->benign_change,1,idxs+nz-1,nz,idxs,array,INSERT_VALUES);CHKERRQ(ierr);
141681d14e9dSStefano Zampini       ierr = PetscFree(array);CHKERRQ(ierr);
141781d14e9dSStefano Zampini       ierr = MatAssemblyBegin(pcbddc->benign_change,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
141881d14e9dSStefano Zampini       ierr = MatAssemblyEnd(pcbddc->benign_change,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
141981d14e9dSStefano Zampini       /* TODO: need optimization? */
1420*d16cbb6bSStefano Zampini       ierr = MatDestroy(&pcbddc->local_mat);CHKERRQ(ierr);
1421*d16cbb6bSStefano Zampini       ierr = MatPtAP(pcbddc->benign_original_mat,pcbddc->benign_change,MAT_INITIAL_MATRIX,2.0,&pcbddc->local_mat);CHKERRQ(ierr);
1422efc2fbd9SStefano Zampini       /* store local and global idxs for p0 */
1423efc2fbd9SStefano Zampini       pcbddc->benign_p0_lidx = idxs[nz-1];
1424efc2fbd9SStefano Zampini       ierr = ISLocalToGlobalMappingApply(pc->pmat->rmap->mapping,1,&idxs[nz-1],&pcbddc->benign_p0_gidx);CHKERRQ(ierr);
1425c9ed8603SStefano Zampini       ierr = ISRestoreIndices(zerodiag,&idxs);CHKERRQ(ierr);
1426c263805aSStefano Zampini       ierr = ISRestoreIndices(zerodiagc,&idxsc);CHKERRQ(ierr);
1427c263805aSStefano Zampini       ierr = ISDestroy(&zerodiagc);CHKERRQ(ierr);
1428c263805aSStefano Zampini       /* pop B0 mat from pcbddc->local_mat */
1429c263805aSStefano Zampini       ierr = PCBDDCBenignPopOrPushB0(pc,PETSC_TRUE);CHKERRQ(ierr);
1430019a44ceSStefano Zampini     } else { /* this is unlikely to happen but, just in case, destroy the empty IS */
1431c9ed8603SStefano Zampini       ierr = ISDestroy(&zerodiag);CHKERRQ(ierr);
1432f5fd1fbfSStefano Zampini     }
1433674ae819SStefano Zampini   }
1434f4ddd8eeSStefano Zampini 
1435f1a72664SStefano Zampini   /* propagate relevant information */
1436e496cd5dSStefano Zampini   /* workaround for reals */
1437e496cd5dSStefano Zampini #if !defined(PETSC_USE_COMPLEX)
14383301b35fSStefano Zampini   if (matis->A->symmetric_set) {
14393301b35fSStefano Zampini     ierr = MatSetOption(pcbddc->local_mat,MAT_HERMITIAN,matis->A->symmetric);CHKERRQ(ierr);
14403301b35fSStefano Zampini   }
1441e496cd5dSStefano Zampini #endif
144206a4e24aSStefano Zampini   if (matis->A->symmetric_set) {
144306a4e24aSStefano Zampini     ierr = MatSetOption(pcbddc->local_mat,MAT_SYMMETRIC,matis->A->symmetric);CHKERRQ(ierr);
144406a4e24aSStefano Zampini   }
144506a4e24aSStefano Zampini   if (matis->A->spd_set) {
144606a4e24aSStefano Zampini     ierr = MatSetOption(pcbddc->local_mat,MAT_SPD,matis->A->spd);CHKERRQ(ierr);
144706a4e24aSStefano Zampini   }
1448e496cd5dSStefano Zampini 
14495e8657edSStefano Zampini   /* Set up all the "iterative substructuring" common block without computing solvers */
14505e8657edSStefano Zampini   {
14515e8657edSStefano Zampini     Mat temp_mat;
14525e8657edSStefano Zampini 
14535e8657edSStefano Zampini     temp_mat = matis->A;
14545e8657edSStefano Zampini     matis->A = pcbddc->local_mat;
14555e8657edSStefano Zampini     ierr = PCISSetUp(pc,PETSC_FALSE);CHKERRQ(ierr);
14565e8657edSStefano Zampini     pcbddc->local_mat = matis->A;
14575e8657edSStefano Zampini     matis->A = temp_mat;
14585e8657edSStefano Zampini   }
1459684f6988SStefano Zampini 
146081d14e9dSStefano Zampini   /* Analyze interface */
1461674ae819SStefano Zampini   if (computetopography) {
1462674ae819SStefano Zampini     ierr = PCBDDCAnalyzeInterface(pc);CHKERRQ(ierr);
14638de1fae6SStefano Zampini     computeconstraintsmatrix = PETSC_TRUE;
1464674ae819SStefano Zampini   }
1465fb8d54d4SStefano Zampini 
1466*d16cbb6bSStefano Zampini   /* check b(v_I,p_0) = 0 for all v_I (raise error if not) */
1467c9ed8603SStefano Zampini   if (pcbddc->dbg_flag && zerodiag) {
146806f24817SStefano Zampini     PC_IS          *pcis = (PC_IS*)(pc->data);
1469f1a72664SStefano Zampini     Mat            A;
1470f1a72664SStefano Zampini     Vec            vec3_N;
147106f24817SStefano Zampini     IS             dirIS = NULL;
147206f24817SStefano Zampini     PetscScalar    *vals;
147306f24817SStefano Zampini     const PetscInt *idxs;
147406f24817SStefano Zampini     PetscInt       i,nz;
147506f24817SStefano Zampini 
147606f24817SStefano Zampini     /* p0 */
147706f24817SStefano Zampini     ierr = VecSet(pcis->vec1_N,0.);CHKERRQ(ierr);
147806f24817SStefano Zampini     ierr = PetscMalloc1(pcis->n,&vals);CHKERRQ(ierr);
1479c9ed8603SStefano Zampini     ierr = ISGetLocalSize(zerodiag,&nz);CHKERRQ(ierr);
1480c9ed8603SStefano Zampini     ierr = ISGetIndices(zerodiag,&idxs);CHKERRQ(ierr);
1481*d16cbb6bSStefano Zampini     for (i=0;i<nz;i++) vals[i] = 1.; /* TODO add quadrature */
148206f24817SStefano Zampini     ierr = VecSetValues(pcis->vec1_N,nz,idxs,vals,INSERT_VALUES);CHKERRQ(ierr);
148306f24817SStefano Zampini     ierr = VecAssemblyBegin(pcis->vec1_N);CHKERRQ(ierr);
148406f24817SStefano Zampini     ierr = VecAssemblyEnd(pcis->vec1_N);CHKERRQ(ierr);
148506f24817SStefano Zampini     /* v_I */
148606f24817SStefano Zampini     ierr = VecSetRandom(pcis->vec2_N,NULL);CHKERRQ(ierr);
148706f24817SStefano Zampini     for (i=0;i<nz;i++) vals[i] = 0.;
148806f24817SStefano Zampini     ierr = VecSetValues(pcis->vec2_N,nz,idxs,vals,INSERT_VALUES);CHKERRQ(ierr);
1489c9ed8603SStefano Zampini     ierr = ISRestoreIndices(zerodiag,&idxs);CHKERRQ(ierr);
149006f24817SStefano Zampini     ierr = ISGetIndices(pcis->is_B_local,&idxs);CHKERRQ(ierr);
149106f24817SStefano Zampini     for (i=0;i<pcis->n_B;i++) vals[i] = 0.;
149206f24817SStefano Zampini     ierr = VecSetValues(pcis->vec2_N,pcis->n_B,idxs,vals,INSERT_VALUES);CHKERRQ(ierr);
149306f24817SStefano Zampini     ierr = ISRestoreIndices(pcis->is_B_local,&idxs);CHKERRQ(ierr);
149406f24817SStefano Zampini     ierr = PCBDDCGraphGetDirichletDofs(pcbddc->mat_graph,&dirIS);CHKERRQ(ierr);
149506f24817SStefano Zampini     if (dirIS) {
149606f24817SStefano Zampini       PetscInt n;
149706f24817SStefano Zampini 
149806f24817SStefano Zampini       ierr = ISGetLocalSize(dirIS,&n);CHKERRQ(ierr);
149906f24817SStefano Zampini       ierr = ISGetIndices(dirIS,&idxs);CHKERRQ(ierr);
150006f24817SStefano Zampini       for (i=0;i<n;i++) vals[i] = 0.;
150106f24817SStefano Zampini       ierr = VecSetValues(pcis->vec2_N,n,idxs,vals,INSERT_VALUES);CHKERRQ(ierr);
150206f24817SStefano Zampini       ierr = ISRestoreIndices(dirIS,&idxs);CHKERRQ(ierr);
150306f24817SStefano Zampini     }
150406f24817SStefano Zampini     ierr = ISDestroy(&dirIS);CHKERRQ(ierr);
150506f24817SStefano Zampini     ierr = VecAssemblyBegin(pcis->vec2_N);CHKERRQ(ierr);
150606f24817SStefano Zampini     ierr = VecAssemblyEnd(pcis->vec2_N);CHKERRQ(ierr);
1507f1a72664SStefano Zampini     ierr = VecDuplicate(pcis->vec1_N,&vec3_N);CHKERRQ(ierr);
1508f1a72664SStefano Zampini     ierr = VecSet(vec3_N,0.);CHKERRQ(ierr);
1509*d16cbb6bSStefano Zampini     ierr = MatISGetLocalMat(pc->mat,&A);CHKERRQ(ierr);
1510f1a72664SStefano Zampini     ierr = MatMult(A,pcis->vec1_N,vec3_N);CHKERRQ(ierr);
1511f1a72664SStefano Zampini     ierr = VecDot(vec3_N,pcis->vec2_N,&vals[0]);CHKERRQ(ierr);
1512*d16cbb6bSStefano Zampini     if (PetscAbsScalar(vals[0]) > PETSC_SMALL) { /* TODO: should I add the A-norm in test? */
1513*d16cbb6bSStefano Zampini       SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Benign trick can not be applied! b(v_I,p_0) = %f (should be numerically 0.)",PetscAbsScalar(vals[0]));
1514*d16cbb6bSStefano Zampini     }
151506f24817SStefano Zampini     ierr = PetscFree(vals);CHKERRQ(ierr);
1516f1a72664SStefano Zampini     ierr = VecDestroy(&vec3_N);CHKERRQ(ierr);
1517c9ed8603SStefano Zampini   }
1518efc2fbd9SStefano Zampini 
1519efc2fbd9SStefano Zampini   /* check PCBDDCBenignPopOrPush */
1520c9ed8603SStefano Zampini   if (pcbddc->dbg_flag && pcbddc->benign_saddle_point) {
1521c9ed8603SStefano Zampini     PC_IS  *pcis = (PC_IS*)(pc->data);
1522c9ed8603SStefano Zampini 
1523efc2fbd9SStefano Zampini     ierr = VecSetRandom(pcis->vec1_global,NULL);CHKERRQ(ierr);
1524efc2fbd9SStefano Zampini     pcbddc->benign_p0 = -PetscGlobalRank;
1525efc2fbd9SStefano Zampini     ierr = PCBDDCBenignPopOrPushP0(pc,pcis->vec1_global,PETSC_FALSE);CHKERRQ(ierr);
1526efc2fbd9SStefano Zampini     pcbddc->benign_p0 = 1;
1527efc2fbd9SStefano Zampini     ierr = PCBDDCBenignPopOrPushP0(pc,pcis->vec1_global,PETSC_TRUE);CHKERRQ(ierr);
1528c9ed8603SStefano Zampini     if (pcbddc->benign_p0_gidx >=0 && pcbddc->benign_p0 != -PetscGlobalRank) {
1529efc2fbd9SStefano Zampini       SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Error testing PCBDDCBenignPopOrPushP0! Found %1.4e instead of %1.4e\n",pcbddc->benign_p0,-PetscGlobalRank);CHKERRQ(ierr);
1530efc2fbd9SStefano Zampini     }
153106f24817SStefano Zampini   }
153206f24817SStefano Zampini 
1533b96c3477SStefano Zampini   /* Setup local dirichlet solver ksp_D and sub_schurs solvers */
1534684f6988SStefano Zampini   if (computesolvers) {
1535d5574798SStefano Zampini     PCBDDCSubSchurs sub_schurs=pcbddc->sub_schurs;
1536d5574798SStefano Zampini 
1537d5574798SStefano Zampini     if (computesubschurs && computetopography) {
153808122e43SStefano Zampini       ierr = PCBDDCInitSubSchurs(pc);CHKERRQ(ierr);
1539b1b3d7a2SStefano Zampini     }
1540d5574798SStefano Zampini     if (sub_schurs->use_mumps) {
15412070dbb6SStefano Zampini       if (computesubschurs) {
154208122e43SStefano Zampini         ierr = PCBDDCSetUpSubSchurs(pc);CHKERRQ(ierr);
15432070dbb6SStefano Zampini       }
1544d5574798SStefano Zampini       ierr = PCBDDCSetUpLocalSolvers(pc,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr);
1545d5574798SStefano Zampini     } else {
1546d5574798SStefano Zampini       ierr = PCBDDCSetUpLocalSolvers(pc,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr);
15472070dbb6SStefano Zampini       if (computesubschurs) {
1548d5574798SStefano Zampini         ierr = PCBDDCSetUpSubSchurs(pc);CHKERRQ(ierr);
1549d5574798SStefano Zampini       }
15502070dbb6SStefano Zampini     }
155108122e43SStefano Zampini     if (pcbddc->adaptive_selection) {
155208122e43SStefano Zampini       ierr = PCBDDCAdaptiveSelection(pc);CHKERRQ(ierr);
15538de1fae6SStefano Zampini       computeconstraintsmatrix = PETSC_TRUE;
1554b7eb3628SStefano Zampini     }
1555b1b3d7a2SStefano Zampini   }
1556684f6988SStefano Zampini 
1557f4ddd8eeSStefano Zampini   /* infer if NullSpace object attached to Mat via MatSetNearNullSpace has changed */
1558fb8d54d4SStefano Zampini   new_nearnullspace_provided = PETSC_FALSE;
1559f4ddd8eeSStefano Zampini   ierr = MatGetNearNullSpace(pc->pmat,&nearnullspace);CHKERRQ(ierr);
1560f4ddd8eeSStefano Zampini   if (pcbddc->onearnullspace) { /* already used nearnullspace */
1561f4ddd8eeSStefano Zampini     if (!nearnullspace) { /* near null space attached to mat has been destroyed */
1562f4ddd8eeSStefano Zampini       new_nearnullspace_provided = PETSC_TRUE;
1563f4ddd8eeSStefano Zampini     } else {
1564f4ddd8eeSStefano Zampini       /* determine if the two nullspaces are different (should be lightweight) */
1565f4ddd8eeSStefano Zampini       if (nearnullspace != pcbddc->onearnullspace) {
1566f4ddd8eeSStefano Zampini         new_nearnullspace_provided = PETSC_TRUE;
1567165b64e2SStefano Zampini       } else { /* maybe the user has changed the content of the nearnullspace so check vectors ObjectStateId */
1568f4ddd8eeSStefano Zampini         PetscInt         i;
1569165b64e2SStefano Zampini         const Vec        *nearnullvecs;
1570165b64e2SStefano Zampini         PetscObjectState state;
1571165b64e2SStefano Zampini         PetscInt         nnsp_size;
1572165b64e2SStefano Zampini         ierr = MatNullSpaceGetVecs(nearnullspace,NULL,&nnsp_size,&nearnullvecs);CHKERRQ(ierr);
1573f4ddd8eeSStefano Zampini         for (i=0;i<nnsp_size;i++) {
1574f4ddd8eeSStefano Zampini           ierr = PetscObjectStateGet((PetscObject)nearnullvecs[i],&state);CHKERRQ(ierr);
1575165b64e2SStefano Zampini           if (pcbddc->onearnullvecs_state[i] != state) {
1576f4ddd8eeSStefano Zampini             new_nearnullspace_provided = PETSC_TRUE;
1577f4ddd8eeSStefano Zampini             break;
1578f4ddd8eeSStefano Zampini           }
1579f4ddd8eeSStefano Zampini         }
1580f4ddd8eeSStefano Zampini       }
1581f4ddd8eeSStefano Zampini     }
1582f4ddd8eeSStefano Zampini   } else {
1583f4ddd8eeSStefano Zampini     if (!nearnullspace) { /* both nearnullspaces are null */
1584f4ddd8eeSStefano Zampini       new_nearnullspace_provided = PETSC_FALSE;
1585f4ddd8eeSStefano Zampini     } else { /* nearnullspace attached later */
1586f4ddd8eeSStefano Zampini       new_nearnullspace_provided = PETSC_TRUE;
1587f4ddd8eeSStefano Zampini     }
1588f4ddd8eeSStefano Zampini   }
1589f4ddd8eeSStefano Zampini 
1590f4ddd8eeSStefano Zampini   /* Setup constraints and related work vectors */
1591727cdba6SStefano Zampini   /* reset primal space flags */
1592f4ddd8eeSStefano Zampini   pcbddc->new_primal_space = PETSC_FALSE;
1593727cdba6SStefano Zampini   pcbddc->new_primal_space_local = PETSC_FALSE;
15948de1fae6SStefano Zampini   if (computeconstraintsmatrix || new_nearnullspace_provided) {
1595727cdba6SStefano Zampini     /* It also sets the primal space flags */
1596674ae819SStefano Zampini     ierr = PCBDDCConstraintsSetUp(pc);CHKERRQ(ierr);
1597e7b262bdSStefano Zampini     /* Allocate needed local vectors (which depends on quantities defined during ConstraintsSetUp) */
1598f4ddd8eeSStefano Zampini     ierr = PCBDDCSetUpLocalWorkVectors(pc);CHKERRQ(ierr);
15993975b054SStefano Zampini   }
16005e8657edSStefano Zampini 
16013975b054SStefano Zampini   if (computesolvers || pcbddc->new_primal_space) {
16025e8657edSStefano Zampini     if (pcbddc->use_change_of_basis) {
16035e8657edSStefano Zampini       PC_IS *pcis = (PC_IS*)(pc->data);
1604c263805aSStefano Zampini       Mat   temp_mat = NULL;
16055e8657edSStefano Zampini 
1606c9ed8603SStefano Zampini       if (zerodiag) {
1607c263805aSStefano Zampini         /* insert B0 in pcbddc->local_mat */
1608c263805aSStefano Zampini         ierr = PCBDDCBenignPopOrPushB0(pc,PETSC_FALSE);CHKERRQ(ierr);
1609f1a72664SStefano Zampini         /* swap local matrices */
1610f1a72664SStefano Zampini         ierr = MatISGetLocalMat(pc->pmat,&temp_mat);CHKERRQ(ierr);
1611f1a72664SStefano Zampini         ierr = PetscObjectReference((PetscObject)temp_mat);CHKERRQ(ierr);
1612f1a72664SStefano Zampini         ierr = MatISSetLocalMat(pc->pmat,pcbddc->local_mat);CHKERRQ(ierr);
1613f1a72664SStefano Zampini         ierr = MatDestroy(&pcbddc->local_mat);CHKERRQ(ierr);
1614c263805aSStefano Zampini       }
16155e8657edSStefano Zampini       ierr = PCBDDCComputeLocalMatrix(pc,pcbddc->ChangeOfBasisMatrix);CHKERRQ(ierr);
1616c9ed8603SStefano Zampini       if (zerodiag) {
1617c263805aSStefano Zampini         /* restore original matrix */
1618f1a72664SStefano Zampini         ierr = MatISSetLocalMat(pc->pmat,temp_mat);CHKERRQ(ierr);
1619f1a72664SStefano Zampini         ierr = PetscObjectDereference((PetscObject)temp_mat);CHKERRQ(ierr);
1620c263805aSStefano Zampini         /* pop B0 from pcbddc->local_mat */
1621c263805aSStefano Zampini         ierr = PCBDDCBenignPopOrPushB0(pc,PETSC_TRUE);CHKERRQ(ierr);
1622c263805aSStefano Zampini       }
16235e8657edSStefano Zampini       /* get submatrices */
16245e8657edSStefano Zampini       ierr = MatDestroy(&pcis->A_IB);CHKERRQ(ierr);
16255e8657edSStefano Zampini       ierr = MatDestroy(&pcis->A_BI);CHKERRQ(ierr);
16265e8657edSStefano Zampini       ierr = MatDestroy(&pcis->A_BB);CHKERRQ(ierr);
16275e8657edSStefano Zampini       ierr = MatGetSubMatrix(pcbddc->local_mat,pcis->is_B_local,pcis->is_B_local,MAT_INITIAL_MATRIX,&pcis->A_BB);CHKERRQ(ierr);
16285e8657edSStefano Zampini       ierr = MatGetSubMatrix(pcbddc->local_mat,pcis->is_I_local,pcis->is_B_local,MAT_INITIAL_MATRIX,&pcis->A_IB);CHKERRQ(ierr);
16295e8657edSStefano Zampini       ierr = MatGetSubMatrix(pcbddc->local_mat,pcis->is_B_local,pcis->is_I_local,MAT_INITIAL_MATRIX,&pcis->A_BI);CHKERRQ(ierr);
16303975b054SStefano Zampini       /* set flag in pcis to not reuse submatrices during PCISCreate */
16313975b054SStefano Zampini       pcis->reusesubmatrices = PETSC_FALSE;
16325e8657edSStefano Zampini     } else if (!pcbddc->user_ChangeOfBasisMatrix) {
1633b96c3477SStefano Zampini       ierr = MatDestroy(&pcbddc->local_mat);CHKERRQ(ierr);
16345e8657edSStefano Zampini       ierr = PetscObjectReference((PetscObject)matis->A);CHKERRQ(ierr);
16355e8657edSStefano Zampini       pcbddc->local_mat = matis->A;
16365e8657edSStefano Zampini     }
1637b96c3477SStefano Zampini     /* SetUp coarse and local Neumann solvers */
163899cc7994SStefano Zampini     ierr = PCBDDCSetUpSolvers(pc);CHKERRQ(ierr);
1639b96c3477SStefano Zampini     /* SetUp Scaling operator */
1640674ae819SStefano Zampini     ierr = PCBDDCScalingSetUp(pc);CHKERRQ(ierr);
16410c7d97c5SJed Brown   }
164270cf5478SStefano Zampini 
16430369aaf7SStefano Zampini   /* check BDDC operator */
1644*d16cbb6bSStefano Zampini   if (pcbddc->dbg_flag && (pcbddc->n_vertices == pcbddc->local_primal_size) ) {
16450369aaf7SStefano Zampini     PC_IS          *pcis = (PC_IS*)(pc->data);
16460369aaf7SStefano Zampini     Mat            S_j,B0=NULL,B0_B=NULL;
16470369aaf7SStefano Zampini     Vec            dummy_vec=NULL,vec_check_B,vec_scale_P;
16480369aaf7SStefano Zampini     PetscScalar    norm,p0_check,*array,*array2;
16490369aaf7SStefano Zampini     PetscInt       i;
16500369aaf7SStefano Zampini 
16510369aaf7SStefano Zampini     /* B0 and B0_B */
16520369aaf7SStefano Zampini     if (zerodiag) {
16530369aaf7SStefano Zampini       IS       dummy;
16540369aaf7SStefano Zampini       PetscInt ii[2];
16550369aaf7SStefano Zampini 
16560369aaf7SStefano Zampini       ii[0] = 0;
16570369aaf7SStefano Zampini       ii[1] = pcbddc->B0_ncol;
16580369aaf7SStefano Zampini       ierr = MatCreateSeqAIJWithArrays(PETSC_COMM_SELF,1,pcis->n,ii,pcbddc->B0_cols,pcbddc->B0_vals,&B0);CHKERRQ(ierr);
16590369aaf7SStefano Zampini       ierr = ISCreateStride(PETSC_COMM_SELF,1,0,1,&dummy);CHKERRQ(ierr);
16600369aaf7SStefano Zampini       ierr = MatGetSubMatrix(B0,dummy,pcis->is_B_local,MAT_INITIAL_MATRIX,&B0_B);CHKERRQ(ierr);
16610369aaf7SStefano Zampini       ierr = MatCreateVecs(B0_B,NULL,&dummy_vec);CHKERRQ(ierr);
16620369aaf7SStefano Zampini       ierr = ISDestroy(&dummy);CHKERRQ(ierr);
16630369aaf7SStefano Zampini     }
16640369aaf7SStefano Zampini     /* I need a primal vector to scale primal nodes since BDDC sums contibutions */
16650369aaf7SStefano Zampini     ierr = VecDuplicate(pcbddc->vec1_P,&vec_scale_P);CHKERRQ(ierr);
16660369aaf7SStefano Zampini     ierr = VecSet(pcbddc->vec1_P,1.0);CHKERRQ(ierr);
16670369aaf7SStefano Zampini     ierr = VecScatterBegin(pcbddc->coarse_loc_to_glob,pcbddc->vec1_P,pcbddc->coarse_vec,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
16680369aaf7SStefano Zampini     ierr = VecScatterEnd(pcbddc->coarse_loc_to_glob,pcbddc->vec1_P,pcbddc->coarse_vec,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
16690369aaf7SStefano Zampini     ierr = VecScatterBegin(pcbddc->coarse_loc_to_glob,pcbddc->coarse_vec,vec_scale_P,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
16700369aaf7SStefano Zampini     ierr = VecScatterEnd(pcbddc->coarse_loc_to_glob,pcbddc->coarse_vec,vec_scale_P,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
16710369aaf7SStefano Zampini     ierr = VecReciprocal(vec_scale_P);CHKERRQ(ierr);
16720369aaf7SStefano Zampini     /* S_j */
16730369aaf7SStefano Zampini     ierr = MatCreateSchurComplement(pcis->A_II,pcis->A_II,pcis->A_IB,pcis->A_BI,pcis->A_BB,&S_j);CHKERRQ(ierr);
16740369aaf7SStefano Zampini     ierr = MatSchurComplementSetKSP(S_j,pcbddc->ksp_D);CHKERRQ(ierr);
16750369aaf7SStefano Zampini 
16760369aaf7SStefano Zampini     /* mimic vector in \widetilde{W}_\Gamma */
16770369aaf7SStefano Zampini     ierr = VecSetRandom(pcis->vec1_N,NULL);CHKERRQ(ierr);
16780369aaf7SStefano Zampini     /* continuous in primal space */
16790369aaf7SStefano Zampini     ierr = VecSetRandom(pcbddc->coarse_vec,NULL);CHKERRQ(ierr);
16800369aaf7SStefano Zampini     ierr = VecScatterBegin(pcbddc->coarse_loc_to_glob,pcbddc->coarse_vec,pcbddc->vec1_P,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
16810369aaf7SStefano Zampini     ierr = VecScatterEnd(pcbddc->coarse_loc_to_glob,pcbddc->coarse_vec,pcbddc->vec1_P,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
16820369aaf7SStefano Zampini     ierr = VecGetArray(pcbddc->vec1_P,&array);CHKERRQ(ierr);
16830369aaf7SStefano Zampini     if (zerodiag) {
16840369aaf7SStefano Zampini       p0_check = array[pcbddc->local_primal_size-1];
16850369aaf7SStefano Zampini     } else {
16860369aaf7SStefano Zampini       p0_check = 0;
16870369aaf7SStefano Zampini     }
16880369aaf7SStefano Zampini     ierr = VecSetValues(pcis->vec1_N,pcbddc->local_primal_size,pcbddc->local_primal_ref_node,array,INSERT_VALUES);CHKERRQ(ierr);
16890369aaf7SStefano Zampini     ierr = VecRestoreArray(pcbddc->vec1_P,&array);CHKERRQ(ierr);
16900369aaf7SStefano Zampini     ierr = VecAssemblyBegin(pcis->vec1_N);CHKERRQ(ierr);
16910369aaf7SStefano Zampini     ierr = VecAssemblyEnd(pcis->vec1_N);CHKERRQ(ierr);
16920369aaf7SStefano Zampini     ierr = VecScatterBegin(pcis->N_to_B,pcis->vec1_N,pcis->vec2_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
16930369aaf7SStefano Zampini     ierr = VecScatterEnd(pcis->N_to_B,pcis->vec1_N,pcis->vec2_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
16940369aaf7SStefano Zampini     ierr = VecDuplicate(pcis->vec2_B,&vec_check_B);CHKERRQ(ierr);
16950369aaf7SStefano Zampini     ierr = VecCopy(pcis->vec2_B,vec_check_B);CHKERRQ(ierr);
16960369aaf7SStefano Zampini 
16970369aaf7SStefano Zampini     /* assemble rhs for coarse problem */
16980369aaf7SStefano Zampini     /* widetilde{S}_\Gamma w_\Gamma + \widetilde{B0}^T_B p0 */
16990369aaf7SStefano Zampini     /* local with Schur */
17000369aaf7SStefano Zampini     ierr = MatMult(S_j,pcis->vec2_B,pcis->vec1_B);CHKERRQ(ierr);
17010369aaf7SStefano Zampini     if (zerodiag) {
17020369aaf7SStefano Zampini       ierr = VecGetArray(dummy_vec,&array);CHKERRQ(ierr);
17030369aaf7SStefano Zampini       array[0] = p0_check;
17040369aaf7SStefano Zampini       ierr = VecRestoreArray(dummy_vec,&array);CHKERRQ(ierr);
17050369aaf7SStefano Zampini       ierr = MatMultTransposeAdd(B0_B,dummy_vec,pcis->vec1_B,pcis->vec1_B);CHKERRQ(ierr);
17060369aaf7SStefano Zampini     }
17070369aaf7SStefano Zampini     /* sum on primal nodes the local contributions */
17080369aaf7SStefano Zampini     ierr = VecScatterBegin(pcis->N_to_B,pcis->vec1_B,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
17090369aaf7SStefano Zampini     ierr = VecScatterEnd(pcis->N_to_B,pcis->vec1_B,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
17100369aaf7SStefano Zampini     ierr = VecGetArray(pcis->vec1_N,&array);CHKERRQ(ierr);
17110369aaf7SStefano Zampini     ierr = VecGetArray(pcbddc->vec1_P,&array2);CHKERRQ(ierr);
17120369aaf7SStefano Zampini     for (i=0;i<pcbddc->local_primal_size;i++) array2[i] = array[pcbddc->local_primal_ref_node[i]];
17130369aaf7SStefano Zampini     ierr = VecRestoreArray(pcbddc->vec1_P,&array2);CHKERRQ(ierr);
17140369aaf7SStefano Zampini     ierr = VecRestoreArray(pcis->vec1_N,&array);CHKERRQ(ierr);
17150369aaf7SStefano Zampini     ierr = VecSet(pcbddc->coarse_vec,0.);CHKERRQ(ierr);
17160369aaf7SStefano Zampini     ierr = VecScatterBegin(pcbddc->coarse_loc_to_glob,pcbddc->vec1_P,pcbddc->coarse_vec,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
17170369aaf7SStefano Zampini     ierr = VecScatterEnd(pcbddc->coarse_loc_to_glob,pcbddc->vec1_P,pcbddc->coarse_vec,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
17180369aaf7SStefano Zampini     ierr = VecScatterBegin(pcbddc->coarse_loc_to_glob,pcbddc->coarse_vec,pcbddc->vec1_P,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
17190369aaf7SStefano Zampini     ierr = VecScatterEnd(pcbddc->coarse_loc_to_glob,pcbddc->coarse_vec,pcbddc->vec1_P,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
17200369aaf7SStefano Zampini     ierr = VecGetArray(pcbddc->vec1_P,&array);CHKERRQ(ierr);
17210369aaf7SStefano Zampini     /* scale primal nodes (BDDC sums contibutions) */
17220369aaf7SStefano Zampini     ierr = VecPointwiseMult(pcbddc->vec1_P,vec_scale_P,pcbddc->vec1_P);CHKERRQ(ierr);
17230369aaf7SStefano Zampini     ierr = VecSetValues(pcis->vec1_N,pcbddc->local_primal_size,pcbddc->local_primal_ref_node,array,INSERT_VALUES);CHKERRQ(ierr);
17240369aaf7SStefano Zampini     ierr = VecRestoreArray(pcbddc->vec1_P,&array);CHKERRQ(ierr);
17250369aaf7SStefano Zampini     ierr = VecAssemblyBegin(pcis->vec1_N);CHKERRQ(ierr);
17260369aaf7SStefano Zampini     ierr = VecAssemblyEnd(pcis->vec1_N);CHKERRQ(ierr);
17270369aaf7SStefano Zampini     ierr = VecScatterBegin(pcis->N_to_B,pcis->vec1_N,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
17280369aaf7SStefano Zampini     ierr = VecScatterEnd(pcis->N_to_B,pcis->vec1_N,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
17290369aaf7SStefano Zampini     /* global: \widetilde{B0}_B w_\Gamma */
17300369aaf7SStefano Zampini     if (zerodiag) {
17310369aaf7SStefano Zampini       ierr = MatMult(B0_B,pcis->vec2_B,dummy_vec);CHKERRQ(ierr);
17320369aaf7SStefano Zampini       ierr = VecGetArray(dummy_vec,&array);CHKERRQ(ierr);
17330369aaf7SStefano Zampini       pcbddc->benign_p0 = array[0];
17340369aaf7SStefano Zampini       ierr = VecRestoreArray(dummy_vec,&array);CHKERRQ(ierr);
17350369aaf7SStefano Zampini     } else {
17360369aaf7SStefano Zampini       pcbddc->benign_p0 = 0.;
17370369aaf7SStefano Zampini     }
17380369aaf7SStefano Zampini     /* BDDC */
17390369aaf7SStefano Zampini     ierr = VecSet(pcis->vec1_D,0.);CHKERRQ(ierr);
17400369aaf7SStefano Zampini     ierr = PCBDDCApplyInterfacePreconditioner(pc,PETSC_FALSE);CHKERRQ(ierr);
17410369aaf7SStefano Zampini 
17420369aaf7SStefano Zampini     ierr = VecCopy(pcis->vec1_B,pcis->vec2_B);CHKERRQ(ierr);
17430369aaf7SStefano Zampini     ierr = VecAXPY(pcis->vec1_B,-1.0,vec_check_B);CHKERRQ(ierr);
17440369aaf7SStefano Zampini     ierr = VecNorm(pcis->vec1_B,NORM_INFINITY,&norm);CHKERRQ(ierr);
17450369aaf7SStefano Zampini     PetscPrintf(PETSC_COMM_SELF,"[%d] BDDC local error is %1.4e\n",PetscGlobalRank,norm);
17460369aaf7SStefano Zampini     if (pcbddc->benign_p0_lidx >= 0) {
17470369aaf7SStefano Zampini       PetscPrintf(PETSC_COMM_SELF,"[%d] BDDC p0 error is %1.4e\n",PetscGlobalRank,PetscAbsScalar(pcbddc->benign_p0-p0_check));
17480369aaf7SStefano Zampini     }
17490369aaf7SStefano Zampini 
17500369aaf7SStefano Zampini     ierr = VecDestroy(&vec_scale_P);CHKERRQ(ierr);
17510369aaf7SStefano Zampini     ierr = VecDestroy(&vec_check_B);CHKERRQ(ierr);
17520369aaf7SStefano Zampini     ierr = VecDestroy(&dummy_vec);CHKERRQ(ierr);
17530369aaf7SStefano Zampini     ierr = MatDestroy(&S_j);CHKERRQ(ierr);
17540369aaf7SStefano Zampini     ierr = MatDestroy(&B0);CHKERRQ(ierr);
17550369aaf7SStefano Zampini     ierr = MatDestroy(&B0_B);CHKERRQ(ierr);
17560369aaf7SStefano Zampini   }
17570369aaf7SStefano Zampini   ierr = ISDestroy(&zerodiag);CHKERRQ(ierr);
17580369aaf7SStefano Zampini 
175958a03d70SStefano Zampini   if (pcbddc->dbg_flag) {
176058a03d70SStefano Zampini     ierr = PetscViewerASCIISubtractTab(pcbddc->dbg_viewer,2*pcbddc->current_level);CHKERRQ(ierr);
17612b510759SStefano Zampini   }
17620c7d97c5SJed Brown   PetscFunctionReturn(0);
17630c7d97c5SJed Brown }
17640c7d97c5SJed Brown 
17650c7d97c5SJed Brown /* -------------------------------------------------------------------------- */
17660c7d97c5SJed Brown /*
176750efa1b5SStefano Zampini    PCApply_BDDC - Applies the BDDC operator to a vector.
17680c7d97c5SJed Brown 
17690c7d97c5SJed Brown    Input Parameters:
17700f202f7eSStefano Zampini +  pc - the preconditioner context
17710f202f7eSStefano Zampini -  r - input vector (global)
17720c7d97c5SJed Brown 
17730c7d97c5SJed Brown    Output Parameter:
17740c7d97c5SJed Brown .  z - output vector (global)
17750c7d97c5SJed Brown 
17760c7d97c5SJed Brown    Application Interface Routine: PCApply()
17770c7d97c5SJed Brown  */
17780c7d97c5SJed Brown #undef __FUNCT__
17790c7d97c5SJed Brown #define __FUNCT__ "PCApply_BDDC"
178053cdbc3dSStefano Zampini PetscErrorCode PCApply_BDDC(PC pc,Vec r,Vec z)
17810c7d97c5SJed Brown {
17820c7d97c5SJed Brown   PC_IS             *pcis = (PC_IS*)(pc->data);
17830c7d97c5SJed Brown   PC_BDDC           *pcbddc = (PC_BDDC*)(pc->data);
1784b097fa66SStefano Zampini   PetscInt          n_B = pcis->n_B, n_D = pcis->n - n_B;
17850c7d97c5SJed Brown   PetscErrorCode    ierr;
17863b03a366Sstefano_zampini   const PetscScalar one = 1.0;
17873b03a366Sstefano_zampini   const PetscScalar m_one = -1.0;
17882617d88aSStefano Zampini   const PetscScalar zero = 0.0;
17890c7d97c5SJed Brown 
17900c7d97c5SJed Brown /* This code is similar to that provided in nn.c for PCNN
17910c7d97c5SJed Brown    NN interface preconditioner changed to BDDC
1792b097fa66SStefano Zampini    Added support for M_3 preconditioner in the reference article (code is active if pcbddc->switch_static == PETSC_TRUE) */
17930c7d97c5SJed Brown 
17940c7d97c5SJed Brown   PetscFunctionBegin;
1795efc2fbd9SStefano Zampini   if (pcbddc->benign_saddle_point) { /* extract p0 from r */
1796efc2fbd9SStefano Zampini     ierr = PCBDDCBenignPopOrPushP0(pc,r,PETSC_TRUE);CHKERRQ(ierr);
1797efc2fbd9SStefano Zampini   }
179885c4d303SStefano Zampini   if (!pcbddc->use_exact_dirichlet_trick) {
1799b097fa66SStefano Zampini     ierr = VecCopy(r,z);CHKERRQ(ierr);
18000c7d97c5SJed Brown     /* First Dirichlet solve */
18010c7d97c5SJed Brown     ierr = VecScatterBegin(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
18020c7d97c5SJed Brown     ierr = VecScatterEnd(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
18030c7d97c5SJed Brown     /*
18040c7d97c5SJed Brown       Assembling right hand side for BDDC operator
1805b097fa66SStefano Zampini       - pcis->vec1_D for the Dirichlet part (if needed, i.e. pcbddc->switch_static == PETSC_TRUE)
1806674ae819SStefano Zampini       - pcis->vec1_B the interface part of the global vector z
18070c7d97c5SJed Brown     */
1808b097fa66SStefano Zampini     if (n_D) {
1809b097fa66SStefano Zampini       ierr = KSPSolve(pcbddc->ksp_D,pcis->vec1_D,pcis->vec2_D);CHKERRQ(ierr);
18100c7d97c5SJed Brown       ierr = VecScale(pcis->vec2_D,m_one);CHKERRQ(ierr);
18118eeda7d8SStefano Zampini       if (pcbddc->switch_static) { ierr = MatMultAdd(pcis->A_II,pcis->vec2_D,pcis->vec1_D,pcis->vec1_D);CHKERRQ(ierr); }
1812b097fa66SStefano Zampini       ierr = MatMult(pcis->A_BI,pcis->vec2_D,pcis->vec1_B);CHKERRQ(ierr);
1813b097fa66SStefano Zampini     } else {
1814b097fa66SStefano Zampini       ierr = VecSet(pcis->vec1_B,zero);CHKERRQ(ierr);
1815b097fa66SStefano Zampini     }
18160c7d97c5SJed Brown     ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
18170c7d97c5SJed Brown     ierr = VecScatterEnd(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1818674ae819SStefano Zampini     ierr = PCBDDCScalingRestriction(pc,z,pcis->vec1_B);CHKERRQ(ierr);
1819b76ba322SStefano Zampini   } else {
1820b097fa66SStefano Zampini     if (pcbddc->switch_static) {
18210bdf917eSStefano Zampini       ierr = VecSet(pcis->vec1_D,zero);CHKERRQ(ierr);
1822b097fa66SStefano Zampini     }
1823674ae819SStefano Zampini     ierr = PCBDDCScalingRestriction(pc,r,pcis->vec1_B);CHKERRQ(ierr);
1824b76ba322SStefano Zampini   }
1825b76ba322SStefano Zampini 
18262617d88aSStefano Zampini   /* Apply interface preconditioner
18272617d88aSStefano Zampini      input/output vecs: pcis->vec1_B and pcis->vec1_D */
1828dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(pc,PETSC_FALSE);CHKERRQ(ierr);
18292617d88aSStefano Zampini 
1830674ae819SStefano Zampini   /* Apply transpose of partition of unity operator */
1831674ae819SStefano Zampini   ierr = PCBDDCScalingExtension(pc,pcis->vec1_B,z);CHKERRQ(ierr);
18320c7d97c5SJed Brown 
18333b03a366Sstefano_zampini   /* Second Dirichlet solve and assembling of output */
18340c7d97c5SJed Brown   ierr = VecScatterBegin(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
18350c7d97c5SJed Brown   ierr = VecScatterEnd(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1836b097fa66SStefano Zampini   if (n_B) {
18370c7d97c5SJed Brown     ierr = MatMult(pcis->A_IB,pcis->vec1_B,pcis->vec3_D);CHKERRQ(ierr);
18388eeda7d8SStefano Zampini     if (pcbddc->switch_static) { ierr = MatMultAdd(pcis->A_II,pcis->vec1_D,pcis->vec3_D,pcis->vec3_D);CHKERRQ(ierr); }
1839b097fa66SStefano Zampini   } else if (pcbddc->switch_static) {
1840b097fa66SStefano Zampini     ierr = MatMult(pcis->A_II,pcis->vec1_D,pcis->vec3_D);CHKERRQ(ierr);
1841b097fa66SStefano Zampini   }
1842df187020SStefano Zampini   ierr = KSPSolve(pcbddc->ksp_D,pcis->vec3_D,pcis->vec4_D);CHKERRQ(ierr);
1843efc2fbd9SStefano Zampini 
1844b097fa66SStefano Zampini   if (!pcbddc->use_exact_dirichlet_trick) {
1845b097fa66SStefano Zampini     if (pcbddc->switch_static) {
1846b097fa66SStefano Zampini       ierr = VecAXPBYPCZ(pcis->vec2_D,m_one,one,m_one,pcis->vec4_D,pcis->vec1_D);CHKERRQ(ierr);
1847b097fa66SStefano Zampini     } else {
1848b097fa66SStefano Zampini       ierr = VecAXPBY(pcis->vec2_D,m_one,m_one,pcis->vec4_D);CHKERRQ(ierr);
1849b097fa66SStefano Zampini     }
18500c7d97c5SJed Brown     ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
18510c7d97c5SJed Brown     ierr = VecScatterEnd(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1852b097fa66SStefano Zampini   } else {
1853b097fa66SStefano Zampini     if (pcbddc->switch_static) {
1854b097fa66SStefano Zampini       ierr = VecAXPBY(pcis->vec4_D,one,m_one,pcis->vec1_D);CHKERRQ(ierr);
1855b097fa66SStefano Zampini     } else {
1856b097fa66SStefano Zampini       ierr = VecScale(pcis->vec4_D,m_one);CHKERRQ(ierr);
1857b097fa66SStefano Zampini     }
1858b097fa66SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,pcis->vec4_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1859b097fa66SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,pcis->vec4_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1860b097fa66SStefano Zampini   }
1861efc2fbd9SStefano Zampini 
1862efc2fbd9SStefano Zampini   if (pcbddc->benign_saddle_point) { /* push p0 (computed in PCBDDCApplyInterface) */
1863efc2fbd9SStefano Zampini     ierr = PCBDDCBenignPopOrPushP0(pc,z,PETSC_FALSE);CHKERRQ(ierr);
1864efc2fbd9SStefano Zampini   }
18650c7d97c5SJed Brown   PetscFunctionReturn(0);
18660c7d97c5SJed Brown }
186750efa1b5SStefano Zampini 
186850efa1b5SStefano Zampini /* -------------------------------------------------------------------------- */
186950efa1b5SStefano Zampini /*
187050efa1b5SStefano Zampini    PCApplyTranspose_BDDC - Applies the transpose of the BDDC operator to a vector.
187150efa1b5SStefano Zampini 
187250efa1b5SStefano Zampini    Input Parameters:
18730f202f7eSStefano Zampini +  pc - the preconditioner context
18740f202f7eSStefano Zampini -  r - input vector (global)
187550efa1b5SStefano Zampini 
187650efa1b5SStefano Zampini    Output Parameter:
187750efa1b5SStefano Zampini .  z - output vector (global)
187850efa1b5SStefano Zampini 
187950efa1b5SStefano Zampini    Application Interface Routine: PCApplyTranspose()
188050efa1b5SStefano Zampini  */
188150efa1b5SStefano Zampini #undef __FUNCT__
188250efa1b5SStefano Zampini #define __FUNCT__ "PCApplyTranspose_BDDC"
188350efa1b5SStefano Zampini PetscErrorCode PCApplyTranspose_BDDC(PC pc,Vec r,Vec z)
188450efa1b5SStefano Zampini {
188550efa1b5SStefano Zampini   PC_IS             *pcis = (PC_IS*)(pc->data);
188650efa1b5SStefano Zampini   PC_BDDC           *pcbddc = (PC_BDDC*)(pc->data);
1887b097fa66SStefano Zampini   PetscInt          n_B = pcis->n_B, n_D = pcis->n - n_B;
188850efa1b5SStefano Zampini   PetscErrorCode    ierr;
188950efa1b5SStefano Zampini   const PetscScalar one = 1.0;
189050efa1b5SStefano Zampini   const PetscScalar m_one = -1.0;
189150efa1b5SStefano Zampini   const PetscScalar zero = 0.0;
189250efa1b5SStefano Zampini 
189350efa1b5SStefano Zampini   PetscFunctionBegin;
189450efa1b5SStefano Zampini   if (!pcbddc->use_exact_dirichlet_trick) {
1895b097fa66SStefano Zampini     ierr = VecCopy(r,z);CHKERRQ(ierr);
189650efa1b5SStefano Zampini     /* First Dirichlet solve */
189750efa1b5SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
189850efa1b5SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
189950efa1b5SStefano Zampini     /*
190050efa1b5SStefano Zampini       Assembling right hand side for BDDC operator
1901b097fa66SStefano Zampini       - pcis->vec1_D for the Dirichlet part (if needed, i.e. pcbddc->switch_static == PETSC_TRUE)
190250efa1b5SStefano Zampini       - pcis->vec1_B the interface part of the global vector z
190350efa1b5SStefano Zampini     */
1904b097fa66SStefano Zampini     if (n_D) {
1905b097fa66SStefano Zampini       ierr = KSPSolveTranspose(pcbddc->ksp_D,pcis->vec1_D,pcis->vec2_D);CHKERRQ(ierr);
190650efa1b5SStefano Zampini       ierr = VecScale(pcis->vec2_D,m_one);CHKERRQ(ierr);
190750efa1b5SStefano Zampini       if (pcbddc->switch_static) { ierr = MatMultTransposeAdd(pcis->A_II,pcis->vec2_D,pcis->vec1_D,pcis->vec1_D);CHKERRQ(ierr); }
1908b097fa66SStefano Zampini       ierr = MatMultTranspose(pcis->A_IB,pcis->vec2_D,pcis->vec1_B);CHKERRQ(ierr);
1909b097fa66SStefano Zampini     } else {
1910b097fa66SStefano Zampini       ierr = VecSet(pcis->vec1_B,zero);CHKERRQ(ierr);
1911b097fa66SStefano Zampini     }
191250efa1b5SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
191350efa1b5SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
191450efa1b5SStefano Zampini     ierr = PCBDDCScalingRestriction(pc,z,pcis->vec1_B);CHKERRQ(ierr);
191550efa1b5SStefano Zampini   } else {
1916b097fa66SStefano Zampini     if (pcbddc->switch_static) {
191750efa1b5SStefano Zampini       ierr = VecSet(pcis->vec1_D,zero);CHKERRQ(ierr);
1918b097fa66SStefano Zampini     }
191950efa1b5SStefano Zampini     ierr = PCBDDCScalingRestriction(pc,r,pcis->vec1_B);CHKERRQ(ierr);
192050efa1b5SStefano Zampini   }
192150efa1b5SStefano Zampini 
192250efa1b5SStefano Zampini   /* Apply interface preconditioner
192350efa1b5SStefano Zampini      input/output vecs: pcis->vec1_B and pcis->vec1_D */
1924dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(pc,PETSC_TRUE);CHKERRQ(ierr);
192550efa1b5SStefano Zampini 
192650efa1b5SStefano Zampini   /* Apply transpose of partition of unity operator */
192750efa1b5SStefano Zampini   ierr = PCBDDCScalingExtension(pc,pcis->vec1_B,z);CHKERRQ(ierr);
192850efa1b5SStefano Zampini 
192950efa1b5SStefano Zampini   /* Second Dirichlet solve and assembling of output */
193050efa1b5SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
193150efa1b5SStefano Zampini   ierr = VecScatterEnd(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1932b097fa66SStefano Zampini   if (n_B) {
193350efa1b5SStefano Zampini     ierr = MatMultTranspose(pcis->A_BI,pcis->vec1_B,pcis->vec3_D);CHKERRQ(ierr);
193450efa1b5SStefano Zampini     if (pcbddc->switch_static) { ierr = MatMultTransposeAdd(pcis->A_II,pcis->vec1_D,pcis->vec3_D,pcis->vec3_D);CHKERRQ(ierr); }
1935b097fa66SStefano Zampini   } else if (pcbddc->switch_static) {
1936b097fa66SStefano Zampini     ierr = MatMultTranspose(pcis->A_II,pcis->vec1_D,pcis->vec3_D);CHKERRQ(ierr);
1937b097fa66SStefano Zampini   }
1938b0147a47SStefano Zampini   ierr = KSPSolveTranspose(pcbddc->ksp_D,pcis->vec3_D,pcis->vec4_D);CHKERRQ(ierr);
1939b097fa66SStefano Zampini   if (!pcbddc->use_exact_dirichlet_trick) {
1940b097fa66SStefano Zampini     if (pcbddc->switch_static) {
1941b097fa66SStefano Zampini       ierr = VecAXPBYPCZ(pcis->vec2_D,m_one,one,m_one,pcis->vec4_D,pcis->vec1_D);CHKERRQ(ierr);
1942b097fa66SStefano Zampini     } else {
1943b097fa66SStefano Zampini       ierr = VecAXPBY(pcis->vec2_D,m_one,m_one,pcis->vec4_D);CHKERRQ(ierr);
1944b097fa66SStefano Zampini     }
194550efa1b5SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
194650efa1b5SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1947b097fa66SStefano Zampini   } else {
1948b097fa66SStefano Zampini     if (pcbddc->switch_static) {
1949b097fa66SStefano Zampini       ierr = VecAXPBY(pcis->vec4_D,one,m_one,pcis->vec1_D);CHKERRQ(ierr);
1950b097fa66SStefano Zampini     } else {
1951b097fa66SStefano Zampini       ierr = VecScale(pcis->vec4_D,m_one);CHKERRQ(ierr);
1952b097fa66SStefano Zampini     }
1953b097fa66SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,pcis->vec4_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1954b097fa66SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,pcis->vec4_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1955b097fa66SStefano Zampini   }
195650efa1b5SStefano Zampini   PetscFunctionReturn(0);
195750efa1b5SStefano Zampini }
1958da1bb401SStefano Zampini /* -------------------------------------------------------------------------- */
1959674ae819SStefano Zampini 
1960da1bb401SStefano Zampini #undef __FUNCT__
1961da1bb401SStefano Zampini #define __FUNCT__ "PCDestroy_BDDC"
1962da1bb401SStefano Zampini PetscErrorCode PCDestroy_BDDC(PC pc)
1963da1bb401SStefano Zampini {
1964da1bb401SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
1965da1bb401SStefano Zampini   PetscErrorCode ierr;
1966da1bb401SStefano Zampini 
1967da1bb401SStefano Zampini   PetscFunctionBegin;
1968da1bb401SStefano Zampini   /* free data created by PCIS */
1969da1bb401SStefano Zampini   ierr = PCISDestroy(pc);CHKERRQ(ierr);
1970674ae819SStefano Zampini   /* free BDDC custom data  */
1971674ae819SStefano Zampini   ierr = PCBDDCResetCustomization(pc);CHKERRQ(ierr);
1972674ae819SStefano Zampini   /* destroy objects related to topography */
1973674ae819SStefano Zampini   ierr = PCBDDCResetTopography(pc);CHKERRQ(ierr);
1974674ae819SStefano Zampini   /* free allocated graph structure */
1975da1bb401SStefano Zampini   ierr = PetscFree(pcbddc->mat_graph);CHKERRQ(ierr);
1976b96c3477SStefano Zampini   /* free allocated sub schurs structure */
1977b96c3477SStefano Zampini   ierr = PetscFree(pcbddc->sub_schurs);CHKERRQ(ierr);
197834a97f8cSStefano Zampini   /* destroy objects for scaling operator */
1979674ae819SStefano Zampini   ierr = PCBDDCScalingDestroy(pc);CHKERRQ(ierr);
198034a97f8cSStefano Zampini   ierr = PetscFree(pcbddc->deluxe_ctx);CHKERRQ(ierr);
1981674ae819SStefano Zampini   /* free solvers stuff */
1982674ae819SStefano Zampini   ierr = PCBDDCResetSolvers(pc);CHKERRQ(ierr);
198362a6ff1dSStefano Zampini   /* free global vectors needed in presolve */
198462a6ff1dSStefano Zampini   ierr = VecDestroy(&pcbddc->temp_solution);CHKERRQ(ierr);
198562a6ff1dSStefano Zampini   ierr = VecDestroy(&pcbddc->original_rhs);CHKERRQ(ierr);
1986906d46d4SStefano Zampini   /* free stuff for change of basis hooks */
1987906d46d4SStefano Zampini   if (pcbddc->new_global_mat) {
1988906d46d4SStefano Zampini     PCBDDCChange_ctx change_ctx;
1989906d46d4SStefano Zampini     ierr = MatShellGetContext(pcbddc->new_global_mat,&change_ctx);CHKERRQ(ierr);
1990906d46d4SStefano Zampini     ierr = MatDestroy(&change_ctx->original_mat);CHKERRQ(ierr);
1991906d46d4SStefano Zampini     ierr = MatDestroy(&change_ctx->global_change);CHKERRQ(ierr);
1992906d46d4SStefano Zampini     ierr = VecDestroyVecs(2,&change_ctx->work);CHKERRQ(ierr);
1993906d46d4SStefano Zampini     ierr = PetscFree(change_ctx);CHKERRQ(ierr);
1994906d46d4SStefano Zampini   }
1995906d46d4SStefano Zampini   ierr = MatDestroy(&pcbddc->new_global_mat);CHKERRQ(ierr);
19963425bc38SStefano Zampini   /* remove functions */
1997906d46d4SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetChangeOfBasisMat_C",NULL);CHKERRQ(ierr);
1998674ae819SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetPrimalVerticesLocalIS_C",NULL);CHKERRQ(ierr);
1999bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetCoarseningRatio_C",NULL);CHKERRQ(ierr);
20002b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevel_C",NULL);CHKERRQ(ierr);
2001b8ffe317SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetUseExactDirichlet_C",NULL);CHKERRQ(ierr);
20022b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevels_C",NULL);CHKERRQ(ierr);
2003bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNullSpace_C",NULL);CHKERRQ(ierr);
2004bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundaries_C",NULL);CHKERRQ(ierr);
200582ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundariesLocal_C",NULL);CHKERRQ(ierr);
2006bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundaries_C",NULL);CHKERRQ(ierr);
200782ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundariesLocal_C",NULL);CHKERRQ(ierr);
2008bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundaries_C",NULL);CHKERRQ(ierr);
200982ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundariesLocal_C",NULL);CHKERRQ(ierr);
2010bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundaries_C",NULL);CHKERRQ(ierr);
2011785d1243SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundariesLocal_C",NULL);CHKERRQ(ierr);
2012bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplitting_C",NULL);CHKERRQ(ierr);
201363602bcaSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplittingLocal_C",NULL);CHKERRQ(ierr);
2014bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",NULL);CHKERRQ(ierr);
2015bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCCreateFETIDPOperators_C",NULL);CHKERRQ(ierr);
2016bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetRHS_C",NULL);CHKERRQ(ierr);
2017bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetSolution_C",NULL);CHKERRQ(ierr);
2018674ae819SStefano Zampini   /* Free the private data structure */
2019674ae819SStefano Zampini   ierr = PetscFree(pc->data);CHKERRQ(ierr);
2020da1bb401SStefano Zampini   PetscFunctionReturn(0);
2021da1bb401SStefano Zampini }
20223425bc38SStefano Zampini /* -------------------------------------------------------------------------- */
20231e6b0712SBarry Smith 
20243425bc38SStefano Zampini #undef __FUNCT__
20253425bc38SStefano Zampini #define __FUNCT__ "PCBDDCMatFETIDPGetRHS_BDDC"
20263425bc38SStefano Zampini static PetscErrorCode PCBDDCMatFETIDPGetRHS_BDDC(Mat fetidp_mat, Vec standard_rhs, Vec fetidp_flux_rhs)
20273425bc38SStefano Zampini {
2028674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
2029c08af4c6SStefano Zampini   Vec            copy_standard_rhs;
20303425bc38SStefano Zampini   PC_IS*         pcis;
20313425bc38SStefano Zampini   PC_BDDC*       pcbddc;
20323425bc38SStefano Zampini   PetscErrorCode ierr;
20330c7d97c5SJed Brown 
20343425bc38SStefano Zampini   PetscFunctionBegin;
20353425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
20363425bc38SStefano Zampini   pcis = (PC_IS*)mat_ctx->pc->data;
20373425bc38SStefano Zampini   pcbddc = (PC_BDDC*)mat_ctx->pc->data;
20383425bc38SStefano Zampini 
2039c08af4c6SStefano Zampini   /*
2040c08af4c6SStefano Zampini      change of basis for physical rhs if needed
2041c08af4c6SStefano Zampini      It also changes the rhs in case of dirichlet boundaries
2042c08af4c6SStefano Zampini      TODO: better management when FETIDP will have its own class
2043c08af4c6SStefano Zampini   */
2044c08af4c6SStefano Zampini   ierr = VecDuplicate(standard_rhs,&copy_standard_rhs);CHKERRQ(ierr);
2045c08af4c6SStefano Zampini   ierr = VecCopy(standard_rhs,copy_standard_rhs);CHKERRQ(ierr);
2046c08af4c6SStefano Zampini   ierr = PCPreSolve_BDDC(mat_ctx->pc,NULL,copy_standard_rhs,NULL);CHKERRQ(ierr);
20473425bc38SStefano Zampini   /* store vectors for computation of fetidp final solution */
2048c08af4c6SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_D,copy_standard_rhs,mat_ctx->temp_solution_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2049c08af4c6SStefano Zampini   ierr = VecScatterEnd(pcis->global_to_D,copy_standard_rhs,mat_ctx->temp_solution_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2050fb223d50SStefano Zampini   /* scale rhs since it should be unassembled */
2051fb223d50SStefano Zampini   /* TODO use counter scaling? (also below) */
2052c08af4c6SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_B,copy_standard_rhs,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2053c08af4c6SStefano Zampini   ierr = VecScatterEnd(pcis->global_to_B,copy_standard_rhs,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2054674ae819SStefano Zampini   /* Apply partition of unity */
20553425bc38SStefano Zampini   ierr = VecPointwiseMult(mat_ctx->temp_solution_B,pcis->D,mat_ctx->temp_solution_B);CHKERRQ(ierr);
2056c08af4c6SStefano Zampini   /* ierr = PCBDDCScalingRestriction(mat_ctx->pc,copy_standard_rhs,mat_ctx->temp_solution_B);CHKERRQ(ierr); */
20578eeda7d8SStefano Zampini   if (!pcbddc->switch_static) {
20583425bc38SStefano Zampini     /* compute partially subassembled Schur complement right-hand side */
20593425bc38SStefano Zampini     ierr = KSPSolve(pcbddc->ksp_D,mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr);
20603425bc38SStefano Zampini     ierr = MatMult(pcis->A_BI,pcis->vec1_D,pcis->vec1_B);CHKERRQ(ierr);
20613425bc38SStefano Zampini     ierr = VecAXPY(mat_ctx->temp_solution_B,-1.0,pcis->vec1_B);CHKERRQ(ierr);
2062c08af4c6SStefano Zampini     ierr = VecSet(copy_standard_rhs,0.0);CHKERRQ(ierr);
2063c08af4c6SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,mat_ctx->temp_solution_B,copy_standard_rhs,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2064c08af4c6SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_B,mat_ctx->temp_solution_B,copy_standard_rhs,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2065c08af4c6SStefano Zampini     /* ierr = PCBDDCScalingRestriction(mat_ctx->pc,copy_standard_rhs,mat_ctx->temp_solution_B);CHKERRQ(ierr); */
2066c08af4c6SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,copy_standard_rhs,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2067c08af4c6SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_B,copy_standard_rhs,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
20683425bc38SStefano Zampini     ierr = VecPointwiseMult(mat_ctx->temp_solution_B,pcis->D,mat_ctx->temp_solution_B);CHKERRQ(ierr);
20693425bc38SStefano Zampini   }
2070c08af4c6SStefano Zampini   ierr = VecDestroy(&copy_standard_rhs);CHKERRQ(ierr);
20713425bc38SStefano Zampini   /* BDDC rhs */
20723425bc38SStefano Zampini   ierr = VecCopy(mat_ctx->temp_solution_B,pcis->vec1_B);CHKERRQ(ierr);
20738eeda7d8SStefano Zampini   if (pcbddc->switch_static) {
20743425bc38SStefano Zampini     ierr = VecCopy(mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr);
20753425bc38SStefano Zampini   }
20763425bc38SStefano Zampini   /* apply BDDC */
2077dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(mat_ctx->pc,PETSC_FALSE);CHKERRQ(ierr);
20783425bc38SStefano Zampini   /* Application of B_delta and assembling of rhs for fetidp fluxes */
20793425bc38SStefano Zampini   ierr = VecSet(fetidp_flux_rhs,0.0);CHKERRQ(ierr);
20803425bc38SStefano Zampini   ierr = MatMult(mat_ctx->B_delta,pcis->vec1_B,mat_ctx->lambda_local);CHKERRQ(ierr);
20813425bc38SStefano Zampini   ierr = VecScatterBegin(mat_ctx->l2g_lambda,mat_ctx->lambda_local,fetidp_flux_rhs,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
20823425bc38SStefano Zampini   ierr = VecScatterEnd(mat_ctx->l2g_lambda,mat_ctx->lambda_local,fetidp_flux_rhs,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
20833425bc38SStefano Zampini   PetscFunctionReturn(0);
20843425bc38SStefano Zampini }
20851e6b0712SBarry Smith 
20863425bc38SStefano Zampini #undef __FUNCT__
20873425bc38SStefano Zampini #define __FUNCT__ "PCBDDCMatFETIDPGetRHS"
20883425bc38SStefano Zampini /*@
20890f202f7eSStefano Zampini  PCBDDCMatFETIDPGetRHS - Compute the right-hand side for FETI-DP linear system using the physical right-hand side
20903425bc38SStefano Zampini 
20913425bc38SStefano Zampini    Collective
20923425bc38SStefano Zampini 
20933425bc38SStefano Zampini    Input Parameters:
20940f202f7eSStefano Zampini +  fetidp_mat      - the FETI-DP matrix object obtained by a call to PCBDDCCreateFETIDPOperators
20950f202f7eSStefano Zampini -  standard_rhs    - the right-hand side of the original linear system
20963425bc38SStefano Zampini 
20973425bc38SStefano Zampini    Output Parameters:
20980f202f7eSStefano Zampini .  fetidp_flux_rhs - the right-hand side for the FETI-DP linear system
20993425bc38SStefano Zampini 
21003425bc38SStefano Zampini    Level: developer
21013425bc38SStefano Zampini 
21023425bc38SStefano Zampini    Notes:
21033425bc38SStefano Zampini 
21040f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCCreateFETIDPOperators, PCBDDCMatFETIDPGetSolution
21053425bc38SStefano Zampini @*/
21063425bc38SStefano Zampini PetscErrorCode PCBDDCMatFETIDPGetRHS(Mat fetidp_mat, Vec standard_rhs, Vec fetidp_flux_rhs)
21073425bc38SStefano Zampini {
2108674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
21093425bc38SStefano Zampini   PetscErrorCode ierr;
21103425bc38SStefano Zampini 
21113425bc38SStefano Zampini   PetscFunctionBegin;
21123425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
21133425bc38SStefano Zampini   ierr = PetscTryMethod(mat_ctx->pc,"PCBDDCMatFETIDPGetRHS_C",(Mat,Vec,Vec),(fetidp_mat,standard_rhs,fetidp_flux_rhs));CHKERRQ(ierr);
21143425bc38SStefano Zampini   PetscFunctionReturn(0);
21153425bc38SStefano Zampini }
21163425bc38SStefano Zampini /* -------------------------------------------------------------------------- */
21171e6b0712SBarry Smith 
21183425bc38SStefano Zampini #undef __FUNCT__
21193425bc38SStefano Zampini #define __FUNCT__ "PCBDDCMatFETIDPGetSolution_BDDC"
21203425bc38SStefano Zampini static PetscErrorCode PCBDDCMatFETIDPGetSolution_BDDC(Mat fetidp_mat, Vec fetidp_flux_sol, Vec standard_sol)
21213425bc38SStefano Zampini {
2122674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
21233425bc38SStefano Zampini   PC_IS*         pcis;
21243425bc38SStefano Zampini   PC_BDDC*       pcbddc;
21253425bc38SStefano Zampini   PetscErrorCode ierr;
21263425bc38SStefano Zampini 
21273425bc38SStefano Zampini   PetscFunctionBegin;
21283425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
21293425bc38SStefano Zampini   pcis = (PC_IS*)mat_ctx->pc->data;
21303425bc38SStefano Zampini   pcbddc = (PC_BDDC*)mat_ctx->pc->data;
21313425bc38SStefano Zampini 
21323425bc38SStefano Zampini   /* apply B_delta^T */
21333425bc38SStefano Zampini   ierr = VecScatterBegin(mat_ctx->l2g_lambda,fetidp_flux_sol,mat_ctx->lambda_local,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
21343425bc38SStefano Zampini   ierr = VecScatterEnd  (mat_ctx->l2g_lambda,fetidp_flux_sol,mat_ctx->lambda_local,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
21353425bc38SStefano Zampini   ierr = MatMultTranspose(mat_ctx->B_delta,mat_ctx->lambda_local,pcis->vec1_B);CHKERRQ(ierr);
21363425bc38SStefano Zampini   /* compute rhs for BDDC application */
21373425bc38SStefano Zampini   ierr = VecAYPX(pcis->vec1_B,-1.0,mat_ctx->temp_solution_B);CHKERRQ(ierr);
21388eeda7d8SStefano Zampini   if (pcbddc->switch_static) {
21393425bc38SStefano Zampini     ierr = VecCopy(mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr);
21403425bc38SStefano Zampini   }
21413425bc38SStefano Zampini   /* apply BDDC */
2142dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(mat_ctx->pc,PETSC_FALSE);CHKERRQ(ierr);
21433425bc38SStefano Zampini   /* put values into standard global vector */
21443425bc38SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
21453425bc38SStefano Zampini   ierr = VecScatterEnd  (pcis->global_to_B,pcis->vec1_B,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
21468eeda7d8SStefano Zampini   if (!pcbddc->switch_static) {
21473425bc38SStefano Zampini     /* compute values into the interior if solved for the partially subassembled Schur complement */
21483425bc38SStefano Zampini     ierr = MatMult(pcis->A_IB,pcis->vec1_B,pcis->vec1_D);CHKERRQ(ierr);
21493425bc38SStefano Zampini     ierr = VecAXPY(mat_ctx->temp_solution_D,-1.0,pcis->vec1_D);CHKERRQ(ierr);
21503425bc38SStefano Zampini     ierr = KSPSolve(pcbddc->ksp_D,mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr);
21513425bc38SStefano Zampini   }
21523425bc38SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_D,pcis->vec1_D,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
21533425bc38SStefano Zampini   ierr = VecScatterEnd  (pcis->global_to_D,pcis->vec1_D,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
21543425bc38SStefano Zampini   /* final change of basis if needed
21553425bc38SStefano Zampini      Is also sums the dirichlet part removed during RHS assembling */
21563308cffdSStefano Zampini   ierr = PCPostSolve_BDDC(mat_ctx->pc,NULL,NULL,standard_sol);CHKERRQ(ierr);
21573425bc38SStefano Zampini   PetscFunctionReturn(0);
21583425bc38SStefano Zampini }
21591e6b0712SBarry Smith 
21603425bc38SStefano Zampini #undef __FUNCT__
21613425bc38SStefano Zampini #define __FUNCT__ "PCBDDCMatFETIDPGetSolution"
21623425bc38SStefano Zampini /*@
21630f202f7eSStefano Zampini  PCBDDCMatFETIDPGetSolution - Compute the physical solution using the solution of the FETI-DP linear system
21643425bc38SStefano Zampini 
21653425bc38SStefano Zampini    Collective
21663425bc38SStefano Zampini 
21673425bc38SStefano Zampini    Input Parameters:
21680f202f7eSStefano Zampini +  fetidp_mat      - the FETI-DP matrix obtained by a call to PCBDDCCreateFETIDPOperators
21690f202f7eSStefano Zampini -  fetidp_flux_sol - the solution of the FETI-DP linear system
21703425bc38SStefano Zampini 
21713425bc38SStefano Zampini    Output Parameters:
21720f202f7eSStefano Zampini .  standard_sol    - the solution defined on the physical domain
21733425bc38SStefano Zampini 
21743425bc38SStefano Zampini    Level: developer
21753425bc38SStefano Zampini 
21763425bc38SStefano Zampini    Notes:
21773425bc38SStefano Zampini 
21780f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCCreateFETIDPOperators, PCBDDCMatFETIDPGetRHS
21793425bc38SStefano Zampini @*/
21803425bc38SStefano Zampini PetscErrorCode PCBDDCMatFETIDPGetSolution(Mat fetidp_mat, Vec fetidp_flux_sol, Vec standard_sol)
21813425bc38SStefano Zampini {
2182674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
21833425bc38SStefano Zampini   PetscErrorCode ierr;
21843425bc38SStefano Zampini 
21853425bc38SStefano Zampini   PetscFunctionBegin;
21863425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
21873425bc38SStefano Zampini   ierr = PetscTryMethod(mat_ctx->pc,"PCBDDCMatFETIDPGetSolution_C",(Mat,Vec,Vec),(fetidp_mat,fetidp_flux_sol,standard_sol));CHKERRQ(ierr);
21883425bc38SStefano Zampini   PetscFunctionReturn(0);
21893425bc38SStefano Zampini }
21903425bc38SStefano Zampini /* -------------------------------------------------------------------------- */
21911e6b0712SBarry Smith 
2192f23aa3ddSBarry Smith extern PetscErrorCode FETIDPMatMult(Mat,Vec,Vec);
2193edf7251bSStefano Zampini extern PetscErrorCode FETIDPMatMultTranspose(Mat,Vec,Vec);
2194f23aa3ddSBarry Smith extern PetscErrorCode PCBDDCDestroyFETIDPMat(Mat);
2195f23aa3ddSBarry Smith extern PetscErrorCode FETIDPPCApply(PC,Vec,Vec);
2196edf7251bSStefano Zampini extern PetscErrorCode FETIDPPCApplyTranspose(PC,Vec,Vec);
2197f23aa3ddSBarry Smith extern PetscErrorCode PCBDDCDestroyFETIDPPC(PC);
2198674ae819SStefano Zampini 
21993425bc38SStefano Zampini #undef __FUNCT__
22003425bc38SStefano Zampini #define __FUNCT__ "PCBDDCCreateFETIDPOperators_BDDC"
22013425bc38SStefano Zampini static PetscErrorCode PCBDDCCreateFETIDPOperators_BDDC(PC pc, Mat *fetidp_mat, PC *fetidp_pc)
22023425bc38SStefano Zampini {
2203674ae819SStefano Zampini 
2204674ae819SStefano Zampini   FETIDPMat_ctx  fetidpmat_ctx;
22053425bc38SStefano Zampini   Mat            newmat;
2206674ae819SStefano Zampini   FETIDPPC_ctx   fetidppc_ctx;
22073425bc38SStefano Zampini   PC             newpc;
2208ce94432eSBarry Smith   MPI_Comm       comm;
22093425bc38SStefano Zampini   PetscErrorCode ierr;
22103425bc38SStefano Zampini 
22113425bc38SStefano Zampini   PetscFunctionBegin;
2212ce94432eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr);
22133425bc38SStefano Zampini   /* FETIDP linear matrix */
22143425bc38SStefano Zampini   ierr = PCBDDCCreateFETIDPMatContext(pc,&fetidpmat_ctx);CHKERRQ(ierr);
22153425bc38SStefano Zampini   ierr = PCBDDCSetupFETIDPMatContext(fetidpmat_ctx);CHKERRQ(ierr);
22163425bc38SStefano Zampini   ierr = MatCreateShell(comm,PETSC_DECIDE,PETSC_DECIDE,fetidpmat_ctx->n_lambda,fetidpmat_ctx->n_lambda,fetidpmat_ctx,&newmat);CHKERRQ(ierr);
22173425bc38SStefano Zampini   ierr = MatShellSetOperation(newmat,MATOP_MULT,(void (*)(void))FETIDPMatMult);CHKERRQ(ierr);
2218edf7251bSStefano Zampini   ierr = MatShellSetOperation(newmat,MATOP_MULT_TRANSPOSE,(void (*)(void))FETIDPMatMultTranspose);CHKERRQ(ierr);
22193425bc38SStefano Zampini   ierr = MatShellSetOperation(newmat,MATOP_DESTROY,(void (*)(void))PCBDDCDestroyFETIDPMat);CHKERRQ(ierr);
22203425bc38SStefano Zampini   ierr = MatSetUp(newmat);CHKERRQ(ierr);
22213425bc38SStefano Zampini   /* FETIDP preconditioner */
22223425bc38SStefano Zampini   ierr = PCBDDCCreateFETIDPPCContext(pc,&fetidppc_ctx);CHKERRQ(ierr);
22233425bc38SStefano Zampini   ierr = PCBDDCSetupFETIDPPCContext(newmat,fetidppc_ctx);CHKERRQ(ierr);
22243425bc38SStefano Zampini   ierr = PCCreate(comm,&newpc);CHKERRQ(ierr);
22253425bc38SStefano Zampini   ierr = PCSetType(newpc,PCSHELL);CHKERRQ(ierr);
22263425bc38SStefano Zampini   ierr = PCShellSetContext(newpc,fetidppc_ctx);CHKERRQ(ierr);
22273425bc38SStefano Zampini   ierr = PCShellSetApply(newpc,FETIDPPCApply);CHKERRQ(ierr);
2228edf7251bSStefano Zampini   ierr = PCShellSetApplyTranspose(newpc,FETIDPPCApplyTranspose);CHKERRQ(ierr);
22293425bc38SStefano Zampini   ierr = PCShellSetDestroy(newpc,PCBDDCDestroyFETIDPPC);CHKERRQ(ierr);
223023ee1639SBarry Smith   ierr = PCSetOperators(newpc,newmat,newmat);CHKERRQ(ierr);
22313425bc38SStefano Zampini   ierr = PCSetUp(newpc);CHKERRQ(ierr);
22323425bc38SStefano Zampini   /* return pointers for objects created */
22333425bc38SStefano Zampini   *fetidp_mat=newmat;
22343425bc38SStefano Zampini   *fetidp_pc=newpc;
22353425bc38SStefano Zampini   PetscFunctionReturn(0);
22363425bc38SStefano Zampini }
22371e6b0712SBarry Smith 
22383425bc38SStefano Zampini #undef __FUNCT__
22393425bc38SStefano Zampini #define __FUNCT__ "PCBDDCCreateFETIDPOperators"
22403425bc38SStefano Zampini /*@
22410f202f7eSStefano Zampini  PCBDDCCreateFETIDPOperators - Create FETI-DP operators
22423425bc38SStefano Zampini 
22433425bc38SStefano Zampini    Collective
22443425bc38SStefano Zampini 
22453425bc38SStefano Zampini    Input Parameters:
22460f202f7eSStefano Zampini .  pc - the BDDC preconditioning context (setup should have been called before)
224728509bceSStefano Zampini 
224828509bceSStefano Zampini    Output Parameters:
22490f202f7eSStefano Zampini +  fetidp_mat - shell FETI-DP matrix object
22500f202f7eSStefano Zampini -  fetidp_pc  - shell Dirichlet preconditioner for FETI-DP matrix
225128509bceSStefano Zampini 
225228509bceSStefano Zampini    Options Database Keys:
22530f202f7eSStefano Zampini .    -fetidp_fullyredundant <false> - use or not a fully redundant set of Lagrange multipliers
22543425bc38SStefano Zampini 
22553425bc38SStefano Zampini    Level: developer
22563425bc38SStefano Zampini 
22573425bc38SStefano Zampini    Notes:
22580f202f7eSStefano Zampini      Currently the only operations provided for FETI-DP matrix are MatMult and MatMultTranspose
22593425bc38SStefano Zampini 
22600f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCMatFETIDPGetRHS, PCBDDCMatFETIDPGetSolution
22613425bc38SStefano Zampini @*/
22623425bc38SStefano Zampini PetscErrorCode PCBDDCCreateFETIDPOperators(PC pc, Mat *fetidp_mat, PC *fetidp_pc)
22633425bc38SStefano Zampini {
22643425bc38SStefano Zampini   PetscErrorCode ierr;
22653425bc38SStefano Zampini 
22663425bc38SStefano Zampini   PetscFunctionBegin;
22673425bc38SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
22683425bc38SStefano Zampini   if (pc->setupcalled) {
2269516d51a7SStefano Zampini     ierr = PetscUseMethod(pc,"PCBDDCCreateFETIDPOperators_C",(PC,Mat*,PC*),(pc,fetidp_mat,fetidp_pc));CHKERRQ(ierr);
2270f23aa3ddSBarry Smith   } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"You must call PCSetup_BDDC() first \n");
22713425bc38SStefano Zampini   PetscFunctionReturn(0);
22723425bc38SStefano Zampini }
22730c7d97c5SJed Brown /* -------------------------------------------------------------------------- */
2274da1bb401SStefano Zampini /*MC
2275da1bb401SStefano Zampini    PCBDDC - Balancing Domain Decomposition by Constraints.
22760c7d97c5SJed Brown 
227728509bceSStefano Zampini    An implementation of the BDDC preconditioner based on
227828509bceSStefano Zampini 
227928509bceSStefano Zampini .vb
228028509bceSStefano Zampini    [1] C. R. Dohrmann. "An approximate BDDC preconditioner", Numerical Linear Algebra with Applications Volume 14, Issue 2, pages 149-168, March 2007
228128509bceSStefano Zampini    [2] A. Klawonn and O. B. Widlund. "Dual-Primal FETI Methods for Linear Elasticity", http://cs.nyu.edu/csweb/Research/TechReports/TR2004-855/TR2004-855.pdf
228228509bceSStefano Zampini    [3] J. Mandel, B. Sousedik, C. R. Dohrmann. "Multispace and Multilevel BDDC", http://arxiv.org/abs/0712.3977
22830f202f7eSStefano Zampini    [4] C. Pechstein and C. R. Dohrmann. "Modern domain decomposition methods BDDC, deluxe scaling, and an algebraic approach", Seminar talk, Linz, December 2013, http://people.ricam.oeaw.ac.at/c.pechstein/pechstein-bddc2013.pdf
228428509bceSStefano Zampini .ve
228528509bceSStefano Zampini 
228628509bceSStefano Zampini    The matrix to be preconditioned (Pmat) must be of type MATIS.
228728509bceSStefano Zampini 
22880f202f7eSStefano Zampini    Currently works with MATIS matrices with local matrices of type MATSEQAIJ, MATSEQBAIJ or MATSEQSBAIJ, either with real or complex numbers.
228928509bceSStefano Zampini 
229028509bceSStefano Zampini    It also works with unsymmetric and indefinite problems.
229128509bceSStefano Zampini 
2292b6fdb6dfSStefano Zampini    Unlike 'conventional' interface preconditioners, PCBDDC iterates over all degrees of freedom, not just those on the interface. This allows the use of approximate solvers on the subdomains.
2293b6fdb6dfSStefano Zampini 
22940f202f7eSStefano Zampini    Approximate local solvers are automatically adapted for singular linear problems (see [1]) if the user has provided the nullspace using PCBDDCSetNullSpace()
229528509bceSStefano Zampini 
22960f202f7eSStefano Zampini    Boundary nodes are split in vertices, edges and faces classes using information from the local to global mapping of dofs and the local connectivity graph of nodes. The latter can be customized by using PCBDDCSetLocalAdjacencyGraph()
22970f202f7eSStefano Zampini    Additional information on dofs can be provided by using PCBDDCSetDofsSplitting(), PCBDDCSetDirichletBoundaries(), PCBDDCSetNeumannBoundaries(), and PCBDDCSetPrimalVerticesLocalIS()
229828509bceSStefano Zampini 
22990f202f7eSStefano Zampini    Constraints can be customized by attaching a MatNullSpace object to the MATIS matrix via MatSetNearNullSpace(). Non-singular modes are retained via SVD.
230028509bceSStefano Zampini 
23010f202f7eSStefano Zampini    Change of basis is performed similarly to [2] when requested. When more than one constraint is present on a single connected component (i.e. an edge or a face), a robust method based on local QR factorizations is used.
23020f202f7eSStefano Zampini    User defined change of basis can be passed to PCBDDC by using PCBDDCSetChangeOfBasisMat()
230328509bceSStefano Zampini 
23040f202f7eSStefano Zampini    The PETSc implementation also supports multilevel BDDC [3]. Coarse grids are partitioned using a MatPartitioning object.
230528509bceSStefano Zampini 
23060f202f7eSStefano Zampini    Adaptive selection of primal constraints [4] is supported for SPD systems with high-contrast in the coefficients if MUMPS is present. Future versions of the code will also consider using MKL_PARDISO or PASTIX.
230728509bceSStefano Zampini 
23080f202f7eSStefano Zampini    An experimental interface to the FETI-DP method is available. FETI-DP operators could be created using PCBDDCCreateFETIDPOperators(). A stand-alone class for the FETI-DP method will be provided in the next releases.
23090f202f7eSStefano Zampini    Deluxe scaling is not supported yet for FETI-DP.
23100f202f7eSStefano Zampini 
23110f202f7eSStefano Zampini    Options Database Keys (some of them, run with -h for a complete list):
23120f202f7eSStefano Zampini 
23130f202f7eSStefano Zampini .    -pc_bddc_use_vertices <true> - use or not vertices in primal space
23140f202f7eSStefano Zampini .    -pc_bddc_use_edges <true> - use or not edges in primal space
23150f202f7eSStefano Zampini .    -pc_bddc_use_faces <false> - use or not faces in primal space
23160f202f7eSStefano Zampini .    -pc_bddc_symmetric <true> - symmetric computation of primal basis functions. Specify false for unsymmetric problems
23170f202f7eSStefano Zampini .    -pc_bddc_use_change_of_basis <false> - use change of basis approach (on edges only)
23180f202f7eSStefano Zampini .    -pc_bddc_use_change_on_faces <false> - use change of basis approach on faces if change of basis has been requested
23190f202f7eSStefano Zampini .    -pc_bddc_switch_static <false> - switches from M_2 (default) to M_3 operator (see reference article [1])
232028509bceSStefano Zampini .    -pc_bddc_levels <0> - maximum number of levels for multilevel
23210f202f7eSStefano Zampini .    -pc_bddc_coarsening_ratio <8> - number of subdomains which will be aggregated together at the coarser level (e.g. H/h ratio at the coarser level, significative only in the multilevel case)
23220f202f7eSStefano Zampini .    -pc_bddc_redistribute <0> - size of a subset of processors where the coarse problem will be remapped (the value is ignored if not at the coarsest level)
23230f202f7eSStefano Zampini .    -pc_bddc_use_deluxe_scaling <false> - use deluxe scaling
23240f202f7eSStefano Zampini .    -pc_bddc_schur_layers <-1> - select the economic version of deluxe scaling by specifying the number of layers (-1 corresponds to the original deluxe scaling)
23250f202f7eSStefano Zampini .    -pc_bddc_adaptive_threshold <0.0> - when a value greater than one is specified, adaptive selection of constraints is performed on edges and faces (requires deluxe scaling and MUMPS installed)
232628509bceSStefano Zampini -    -pc_bddc_check_level <0> - set verbosity level of debugging output
232728509bceSStefano Zampini 
232828509bceSStefano Zampini    Options for Dirichlet, Neumann or coarse solver can be set with
232928509bceSStefano Zampini .vb
233028509bceSStefano Zampini       -pc_bddc_dirichlet_
233128509bceSStefano Zampini       -pc_bddc_neumann_
233228509bceSStefano Zampini       -pc_bddc_coarse_
233328509bceSStefano Zampini .ve
23340f202f7eSStefano Zampini    e.g -pc_bddc_dirichlet_ksp_type richardson -pc_bddc_dirichlet_pc_type gamg. PCBDDC uses by default KPSPREONLY and PCLU.
233528509bceSStefano Zampini 
23360f202f7eSStefano Zampini    When using a multilevel approach, solvers' options at the N-th level (N > 1) can be specified as
233728509bceSStefano Zampini .vb
2338312be037SStefano Zampini       -pc_bddc_dirichlet_lN_
2339312be037SStefano Zampini       -pc_bddc_neumann_lN_
2340312be037SStefano Zampini       -pc_bddc_coarse_lN_
234128509bceSStefano Zampini .ve
23420f202f7eSStefano Zampini    Note that level number ranges from the finest (0) to the coarsest (N).
23430f202f7eSStefano Zampini    In order to specify options for the BDDC operators at the coarser levels (and not for the solvers), prepend -pc_bddc_coarse_ or -pc_bddc_coarse_l to the option, e.g.
23440f202f7eSStefano Zampini .vb
23450f202f7eSStefano Zampini      -pc_bddc_coarse_pc_bddc_adaptive_threshold 5 -pc_bddc_coarse_l1_pc_bddc_redistribute 3
23460f202f7eSStefano Zampini .ve
23470f202f7eSStefano Zampini    will use a threshold of 5 for constraints' selection at the first coarse level and will redistribute the coarse problem of the first coarse level on 3 processors
2348da1bb401SStefano Zampini 
2349da1bb401SStefano Zampini    Level: intermediate
2350da1bb401SStefano Zampini 
2351b6fdb6dfSStefano Zampini    Developer notes:
2352da1bb401SStefano Zampini 
2353da1bb401SStefano Zampini    Contributed by Stefano Zampini
2354da1bb401SStefano Zampini 
2355da1bb401SStefano Zampini .seealso:  PCCreate(), PCSetType(), PCType (for list of available types), PC,  MATIS
2356da1bb401SStefano Zampini M*/
2357b2573a8aSBarry Smith 
2358da1bb401SStefano Zampini #undef __FUNCT__
2359da1bb401SStefano Zampini #define __FUNCT__ "PCCreate_BDDC"
23608cc058d9SJed Brown PETSC_EXTERN PetscErrorCode PCCreate_BDDC(PC pc)
2361da1bb401SStefano Zampini {
2362da1bb401SStefano Zampini   PetscErrorCode      ierr;
2363da1bb401SStefano Zampini   PC_BDDC             *pcbddc;
2364da1bb401SStefano Zampini 
2365da1bb401SStefano Zampini   PetscFunctionBegin;
2366da1bb401SStefano Zampini   /* Creates the private data structure for this preconditioner and attach it to the PC object. */
2367b00a9115SJed Brown   ierr      = PetscNewLog(pc,&pcbddc);CHKERRQ(ierr);
2368da1bb401SStefano Zampini   pc->data  = (void*)pcbddc;
2369da1bb401SStefano Zampini 
2370da1bb401SStefano Zampini   /* create PCIS data structure */
2371da1bb401SStefano Zampini   ierr = PCISCreate(pc);CHKERRQ(ierr);
2372da1bb401SStefano Zampini 
237347d04d0dSStefano Zampini   /* BDDC customization */
237408a5cf49SStefano Zampini   pcbddc->use_local_adj       = PETSC_TRUE;
237547d04d0dSStefano Zampini   pcbddc->use_vertices        = PETSC_TRUE;
237647d04d0dSStefano Zampini   pcbddc->use_edges           = PETSC_TRUE;
237747d04d0dSStefano Zampini   pcbddc->use_faces           = PETSC_FALSE;
237847d04d0dSStefano Zampini   pcbddc->use_change_of_basis = PETSC_FALSE;
237947d04d0dSStefano Zampini   pcbddc->use_change_on_faces = PETSC_FALSE;
238047d04d0dSStefano Zampini   pcbddc->switch_static       = PETSC_FALSE;
2381fa434743SStefano Zampini   pcbddc->use_nnsp_true       = PETSC_FALSE;
2382fa434743SStefano Zampini   pcbddc->use_qr_single       = PETSC_FALSE;
23833301b35fSStefano Zampini   pcbddc->symmetric_primal    = PETSC_TRUE;
238406a4e24aSStefano Zampini   pcbddc->benign_saddle_point = PETSC_FALSE;
238547d04d0dSStefano Zampini   pcbddc->dbg_flag            = 0;
2386b9d89cd5SStefano Zampini   /* private */
2387727cdba6SStefano Zampini   pcbddc->local_primal_size          = 0;
23880e6343abSStefano Zampini   pcbddc->local_primal_size_cc       = 0;
23890e6343abSStefano Zampini   pcbddc->local_primal_ref_node      = 0;
23900e6343abSStefano Zampini   pcbddc->local_primal_ref_mult      = 0;
2391e9189074SStefano Zampini   pcbddc->n_vertices                 = 0;
2392727cdba6SStefano Zampini   pcbddc->primal_indices_local_idxs  = 0;
2393fb180af4SStefano Zampini   pcbddc->recompute_topography       = PETSC_FALSE;
239468457ee5SStefano Zampini   pcbddc->coarse_size                = -1;
2395f4ddd8eeSStefano Zampini   pcbddc->new_primal_space           = PETSC_FALSE;
2396727cdba6SStefano Zampini   pcbddc->new_primal_space_local     = PETSC_FALSE;
2397f4ddd8eeSStefano Zampini   pcbddc->global_primal_indices      = 0;
2398f4ddd8eeSStefano Zampini   pcbddc->onearnullspace             = 0;
2399f4ddd8eeSStefano Zampini   pcbddc->onearnullvecs_state        = 0;
2400674ae819SStefano Zampini   pcbddc->user_primal_vertices       = 0;
24010bdf917eSStefano Zampini   pcbddc->NullSpace                  = 0;
24023972b0daSStefano Zampini   pcbddc->temp_solution              = 0;
2403534831adSStefano Zampini   pcbddc->original_rhs               = 0;
2404534831adSStefano Zampini   pcbddc->local_mat                  = 0;
2405534831adSStefano Zampini   pcbddc->ChangeOfBasisMatrix        = 0;
2406b9b85e73SStefano Zampini   pcbddc->user_ChangeOfBasisMatrix   = 0;
2407906d46d4SStefano Zampini   pcbddc->new_global_mat             = 0;
2408da1bb401SStefano Zampini   pcbddc->coarse_vec                 = 0;
2409da1bb401SStefano Zampini   pcbddc->coarse_ksp                 = 0;
2410da1bb401SStefano Zampini   pcbddc->coarse_phi_B               = 0;
2411da1bb401SStefano Zampini   pcbddc->coarse_phi_D               = 0;
241215aaf578SStefano Zampini   pcbddc->coarse_psi_B               = 0;
241315aaf578SStefano Zampini   pcbddc->coarse_psi_D               = 0;
2414da1bb401SStefano Zampini   pcbddc->vec1_P                     = 0;
2415da1bb401SStefano Zampini   pcbddc->vec1_R                     = 0;
2416da1bb401SStefano Zampini   pcbddc->vec2_R                     = 0;
2417da1bb401SStefano Zampini   pcbddc->local_auxmat1              = 0;
2418da1bb401SStefano Zampini   pcbddc->local_auxmat2              = 0;
2419da1bb401SStefano Zampini   pcbddc->R_to_B                     = 0;
2420da1bb401SStefano Zampini   pcbddc->R_to_D                     = 0;
2421da1bb401SStefano Zampini   pcbddc->ksp_D                      = 0;
2422da1bb401SStefano Zampini   pcbddc->ksp_R                      = 0;
2423da1bb401SStefano Zampini   pcbddc->NeumannBoundaries          = 0;
2424785d1243SStefano Zampini   pcbddc->NeumannBoundariesLocal     = 0;
2425785d1243SStefano Zampini   pcbddc->DirichletBoundaries        = 0;
2426785d1243SStefano Zampini   pcbddc->DirichletBoundariesLocal   = 0;
242760d44989SStefano Zampini   pcbddc->user_provided_isfordofs    = PETSC_FALSE;
242860d44989SStefano Zampini   pcbddc->n_ISForDofs                = 0;
242963602bcaSStefano Zampini   pcbddc->n_ISForDofsLocal           = 0;
2430da1bb401SStefano Zampini   pcbddc->ISForDofs                  = 0;
243163602bcaSStefano Zampini   pcbddc->ISForDofsLocal             = 0;
2432da1bb401SStefano Zampini   pcbddc->ConstraintMatrix           = 0;
243385c4d303SStefano Zampini   pcbddc->use_exact_dirichlet_trick  = PETSC_TRUE;
243447d04d0dSStefano Zampini   pcbddc->coarse_loc_to_glob         = 0;
243547d04d0dSStefano Zampini   pcbddc->coarsening_ratio           = 8;
2436b0c7d250SStefano Zampini   pcbddc->coarse_adj_red             = 0;
24374fad6a16SStefano Zampini   pcbddc->current_level              = 0;
24382b510759SStefano Zampini   pcbddc->max_levels                 = 0;
2439323d395dSStefano Zampini   pcbddc->use_coarse_estimates       = PETSC_FALSE;
244074e2c79eSStefano Zampini   pcbddc->redistribute_coarse        = 0;
2441f3bde8b3SStefano Zampini   pcbddc->coarse_subassembling       = 0;
2442323d395dSStefano Zampini   pcbddc->coarse_subassembling_init  = 0;
244381d14e9dSStefano Zampini 
244481d14e9dSStefano Zampini   /* benign subspace trick */
244581d14e9dSStefano Zampini   pcbddc->B0_ncol                    = 0;
244681d14e9dSStefano Zampini   pcbddc->B0_cols                    = NULL;
244781d14e9dSStefano Zampini   pcbddc->B0_vals                    = NULL;
244881d14e9dSStefano Zampini   pcbddc->benign_change              = 0;
24490369aaf7SStefano Zampini   pcbddc->benign_vec                 = 0;
24500369aaf7SStefano Zampini   pcbddc->benign_original_mat        = 0;
24510369aaf7SStefano Zampini   pcbddc->benign_sf                  = 0;
24528082dc6fSStefano Zampini   pcbddc->benign_p0_lidx             = -1;
24538082dc6fSStefano Zampini   pcbddc->benign_p0_gidx             = -1;
245481d14e9dSStefano Zampini 
2455674ae819SStefano Zampini   /* create local graph structure */
2456674ae819SStefano Zampini   ierr = PCBDDCGraphCreate(&pcbddc->mat_graph);CHKERRQ(ierr);
2457674ae819SStefano Zampini 
2458674ae819SStefano Zampini   /* scaling */
2459674ae819SStefano Zampini   pcbddc->work_scaling          = 0;
246034a97f8cSStefano Zampini   pcbddc->use_deluxe_scaling    = PETSC_FALSE;
2461ac632422SStefano Zampini   pcbddc->faster_deluxe         = PETSC_FALSE;
2462b96c3477SStefano Zampini 
2463b96c3477SStefano Zampini   /* create sub schurs structure */
2464b96c3477SStefano Zampini   ierr = PCBDDCSubSchursCreate(&pcbddc->sub_schurs);CHKERRQ(ierr);
2465b96c3477SStefano Zampini   pcbddc->sub_schurs_rebuild     = PETSC_FALSE;
2466b96c3477SStefano Zampini   pcbddc->sub_schurs_layers      = -1;
2467b96c3477SStefano Zampini   pcbddc->sub_schurs_use_useradj = PETSC_FALSE;
2468b96c3477SStefano Zampini 
2469b96c3477SStefano Zampini   pcbddc->computed_rowadj = PETSC_FALSE;
2470da1bb401SStefano Zampini 
2471b7eb3628SStefano Zampini   /* adaptivity */
2472f6f667cfSStefano Zampini   pcbddc->adaptive_threshold      = 0.0;
247308122e43SStefano Zampini   pcbddc->adaptive_nmax           = 0;
2474f6f667cfSStefano Zampini   pcbddc->adaptive_nmin           = 0;
2475b7eb3628SStefano Zampini 
2476da1bb401SStefano Zampini   /* function pointers */
2477da1bb401SStefano Zampini   pc->ops->apply               = PCApply_BDDC;
247893bd9ae7SStefano Zampini   pc->ops->applytranspose      = PCApplyTranspose_BDDC;
2479da1bb401SStefano Zampini   pc->ops->setup               = PCSetUp_BDDC;
2480da1bb401SStefano Zampini   pc->ops->destroy             = PCDestroy_BDDC;
2481da1bb401SStefano Zampini   pc->ops->setfromoptions      = PCSetFromOptions_BDDC;
2482da1bb401SStefano Zampini   pc->ops->view                = 0;
2483da1bb401SStefano Zampini   pc->ops->applyrichardson     = 0;
2484da1bb401SStefano Zampini   pc->ops->applysymmetricleft  = 0;
2485da1bb401SStefano Zampini   pc->ops->applysymmetricright = 0;
2486534831adSStefano Zampini   pc->ops->presolve            = PCPreSolve_BDDC;
2487534831adSStefano Zampini   pc->ops->postsolve           = PCPostSolve_BDDC;
2488da1bb401SStefano Zampini 
2489da1bb401SStefano Zampini   /* composing function */
2490906d46d4SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetChangeOfBasisMat_C",PCBDDCSetChangeOfBasisMat_BDDC);CHKERRQ(ierr);
2491674ae819SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetPrimalVerticesLocalIS_C",PCBDDCSetPrimalVerticesLocalIS_BDDC);CHKERRQ(ierr);
2492bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetCoarseningRatio_C",PCBDDCSetCoarseningRatio_BDDC);CHKERRQ(ierr);
24932b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevel_C",PCBDDCSetLevel_BDDC);CHKERRQ(ierr);
2494b8ffe317SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetUseExactDirichlet_C",PCBDDCSetUseExactDirichlet_BDDC);CHKERRQ(ierr);
24952b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevels_C",PCBDDCSetLevels_BDDC);CHKERRQ(ierr);
2496bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNullSpace_C",PCBDDCSetNullSpace_BDDC);CHKERRQ(ierr);
2497bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundaries_C",PCBDDCSetDirichletBoundaries_BDDC);CHKERRQ(ierr);
249882ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundariesLocal_C",PCBDDCSetDirichletBoundariesLocal_BDDC);CHKERRQ(ierr);
2499bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundaries_C",PCBDDCSetNeumannBoundaries_BDDC);CHKERRQ(ierr);
250082ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundariesLocal_C",PCBDDCSetNeumannBoundariesLocal_BDDC);CHKERRQ(ierr);
2501bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundaries_C",PCBDDCGetDirichletBoundaries_BDDC);CHKERRQ(ierr);
250282ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundariesLocal_C",PCBDDCGetDirichletBoundariesLocal_BDDC);CHKERRQ(ierr);
2503bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundaries_C",PCBDDCGetNeumannBoundaries_BDDC);CHKERRQ(ierr);
250482ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundariesLocal_C",PCBDDCGetNeumannBoundariesLocal_BDDC);CHKERRQ(ierr);
2505bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplitting_C",PCBDDCSetDofsSplitting_BDDC);CHKERRQ(ierr);
250663602bcaSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplittingLocal_C",PCBDDCSetDofsSplittingLocal_BDDC);CHKERRQ(ierr);
2507bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",PCBDDCSetLocalAdjacencyGraph_BDDC);CHKERRQ(ierr);
2508bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCCreateFETIDPOperators_C",PCBDDCCreateFETIDPOperators_BDDC);CHKERRQ(ierr);
2509bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetRHS_C",PCBDDCMatFETIDPGetRHS_BDDC);CHKERRQ(ierr);
2510bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetSolution_C",PCBDDCMatFETIDPGetSolution_BDDC);CHKERRQ(ierr);
2511da1bb401SStefano Zampini   PetscFunctionReturn(0);
2512da1bb401SStefano Zampini }
25133425bc38SStefano Zampini 
2514