1 /* TODOLIST 2 3 ConstraintsSetup 4 - assure same constraints between neighbours by sorting vals by global index before SVD! 5 - tolerances for constraints as an option (take care of single precision!) 6 - Allow different constraints customizations among different linear solves (requires also reset/destroy of ksp_R and coarse_ksp) 7 - MAT_IGNORE_ZERO_ENTRIES for Constraints Matrix 8 9 Solvers 10 - Try to reduce the work when reusing the solvers 11 - Add support for reuse fill and cholecky factor for coarse solver (similar to local solvers) 12 - reuse already allocated coarse matrix if possible 13 - Propagate ksp prefixes for solvers to mat objects? 14 - Propagate nearnullspace info among levels 15 16 User interface 17 - Change SetNeumannBoundaries to SetNeumannBoundariesLocal and provide new SetNeumannBoundaries (same Dirichlet) 18 - Negative indices in dirichlet and Neumann is should be skipped (now they cause out-of-bounds access) 19 - Provide PCApplyTranpose_BDDC 20 - DofSplitting and DM attached to pc? 21 22 Debugging output 23 - Better management of verbosity levels of debugging output 24 - Crashes on some architecture -> call SynchronizedAllow before every SynchronizedPrintf 25 26 Build 27 - make runexe59 28 29 Extra 30 - Is it possible to work with PCBDDCGraph on boundary indices only (less memory consumed)? 31 - Why options for "pc_bddc_coarse" solver gets propagated to "pc_bddc_coarse_1" solver? 32 - add support for computing h,H and related using coordinates? 33 - Change of basis approach does not work with my nonlinear mechanics example. why? (seems not an issue with l2gmap) 34 - Better management in PCIS code 35 - BDDC with MG framework? 36 37 FETIDP 38 - Move FETIDP code to its own classes 39 40 MATIS related operations contained in BDDC code 41 - Provide general case for subassembling 42 - Preallocation routines in MatConvert_IS_AIJ 43 44 */ 45 46 /* ---------------------------------------------------------------------------------------------------------------------------------------------- 47 Implementation of BDDC preconditioner based on: 48 C. Dohrmann "An approximate BDDC preconditioner", Numerical Linear Algebra with Applications Volume 14, Issue 2, pages 149-168, March 2007 49 ---------------------------------------------------------------------------------------------------------------------------------------------- */ 50 51 #include "bddc.h" /*I "petscpc.h" I*/ /* includes for fortran wrappers */ 52 #include "bddcprivate.h" 53 #include <petscblaslapack.h> 54 55 /* -------------------------------------------------------------------------- */ 56 #undef __FUNCT__ 57 #define __FUNCT__ "PCSetFromOptions_BDDC" 58 PetscErrorCode PCSetFromOptions_BDDC(PC pc) 59 { 60 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 61 PetscErrorCode ierr; 62 63 PetscFunctionBegin; 64 ierr = PetscOptionsHead("BDDC options");CHKERRQ(ierr); 65 /* Verbose debugging */ 66 ierr = PetscOptionsInt("-pc_bddc_check_level","Verbose output for PCBDDC (intended for debug)","none",pcbddc->dbg_flag,&pcbddc->dbg_flag,NULL);CHKERRQ(ierr); 67 /* Primal space cumstomization */ 68 ierr = PetscOptionsBool("-pc_bddc_use_vertices","Use or not corner dofs in coarse space","none",pcbddc->use_vertices,&pcbddc->use_vertices,NULL);CHKERRQ(ierr); 69 ierr = PetscOptionsBool("-pc_bddc_use_edges","Use or not edge constraints in coarse space","none",pcbddc->use_edges,&pcbddc->use_edges,NULL);CHKERRQ(ierr); 70 ierr = PetscOptionsBool("-pc_bddc_use_faces","Use or not face constraints in coarse space","none",pcbddc->use_faces,&pcbddc->use_faces,NULL);CHKERRQ(ierr); 71 /* Change of basis */ 72 ierr = PetscOptionsBool("-pc_bddc_use_change_of_basis","Use or not change of basis on local edge nodes","none",pcbddc->use_change_of_basis,&pcbddc->use_change_of_basis,NULL);CHKERRQ(ierr); 73 ierr = PetscOptionsBool("-pc_bddc_use_change_on_faces","Use or not change of basis on local face nodes","none",pcbddc->use_change_on_faces,&pcbddc->use_change_on_faces,NULL);CHKERRQ(ierr); 74 if (!pcbddc->use_change_of_basis) { 75 pcbddc->use_change_on_faces = PETSC_FALSE; 76 } 77 /* Switch between M_2 (default) and M_3 preconditioners (as defined by C. Dohrmann in the ref. article) */ 78 ierr = PetscOptionsBool("-pc_bddc_switch_static","Switch on static condensation ops around the interface preconditioner","none",pcbddc->switch_static,&pcbddc->switch_static,NULL);CHKERRQ(ierr); 79 ierr = PetscOptionsInt("-pc_bddc_coarsening_ratio","Set coarsening ratio used in multilevel coarsening","none",pcbddc->coarsening_ratio,&pcbddc->coarsening_ratio,NULL);CHKERRQ(ierr); 80 ierr = PetscOptionsInt("-pc_bddc_levels","Set maximum number of levels for multilevel","none",pcbddc->max_levels,&pcbddc->max_levels,NULL);CHKERRQ(ierr); 81 ierr = PetscOptionsBool("-pc_bddc_use_deluxe_scaling","Use deluxe scaling for BDDC","none",pcbddc->use_deluxe_scaling,&pcbddc->use_deluxe_scaling,NULL);CHKERRQ(ierr); 82 ierr = PetscOptionsTail();CHKERRQ(ierr); 83 PetscFunctionReturn(0); 84 } 85 /* -------------------------------------------------------------------------- */ 86 #undef __FUNCT__ 87 #define __FUNCT__ "PCBDDCSetPrimalVerticesLocalIS_BDDC" 88 static PetscErrorCode PCBDDCSetPrimalVerticesLocalIS_BDDC(PC pc, IS PrimalVertices) 89 { 90 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 91 PetscErrorCode ierr; 92 93 PetscFunctionBegin; 94 ierr = ISDestroy(&pcbddc->user_primal_vertices);CHKERRQ(ierr); 95 ierr = PetscObjectReference((PetscObject)PrimalVertices);CHKERRQ(ierr); 96 pcbddc->user_primal_vertices = PrimalVertices; 97 PetscFunctionReturn(0); 98 } 99 #undef __FUNCT__ 100 #define __FUNCT__ "PCBDDCSetPrimalVerticesLocalIS" 101 /*@ 102 PCBDDCSetPrimalVerticesLocalIS - Set additional user defined primal vertices in PCBDDC 103 104 Not collective 105 106 Input Parameters: 107 + pc - the preconditioning context 108 - PrimalVertices - index set of primal vertices in local numbering 109 110 Level: intermediate 111 112 Notes: 113 114 .seealso: PCBDDC 115 @*/ 116 PetscErrorCode PCBDDCSetPrimalVerticesLocalIS(PC pc, IS PrimalVertices) 117 { 118 PetscErrorCode ierr; 119 120 PetscFunctionBegin; 121 PetscValidHeaderSpecific(pc,PC_CLASSID,1); 122 PetscValidHeaderSpecific(PrimalVertices,IS_CLASSID,2); 123 ierr = PetscTryMethod(pc,"PCBDDCSetPrimalVerticesLocalIS_C",(PC,IS),(pc,PrimalVertices));CHKERRQ(ierr); 124 PetscFunctionReturn(0); 125 } 126 /* -------------------------------------------------------------------------- */ 127 #undef __FUNCT__ 128 #define __FUNCT__ "PCBDDCSetCoarseningRatio_BDDC" 129 static PetscErrorCode PCBDDCSetCoarseningRatio_BDDC(PC pc,PetscInt k) 130 { 131 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 132 133 PetscFunctionBegin; 134 pcbddc->coarsening_ratio = k; 135 PetscFunctionReturn(0); 136 } 137 138 #undef __FUNCT__ 139 #define __FUNCT__ "PCBDDCSetCoarseningRatio" 140 /*@ 141 PCBDDCSetCoarseningRatio - Set coarsening ratio used in multilevel 142 143 Logically collective on PC 144 145 Input Parameters: 146 + pc - the preconditioning context 147 - k - coarsening ratio (H/h at the coarser level) 148 149 Approximatively k subdomains at the finer level will be aggregated into a single subdomain at the coarser level 150 151 Level: intermediate 152 153 Notes: 154 155 .seealso: PCBDDC 156 @*/ 157 PetscErrorCode PCBDDCSetCoarseningRatio(PC pc,PetscInt k) 158 { 159 PetscErrorCode ierr; 160 161 PetscFunctionBegin; 162 PetscValidHeaderSpecific(pc,PC_CLASSID,1); 163 PetscValidLogicalCollectiveInt(pc,k,2); 164 ierr = PetscTryMethod(pc,"PCBDDCSetCoarseningRatio_C",(PC,PetscInt),(pc,k));CHKERRQ(ierr); 165 PetscFunctionReturn(0); 166 } 167 168 /* The following functions (PCBDDCSetUseExactDirichlet PCBDDCSetLevel) are not public */ 169 #undef __FUNCT__ 170 #define __FUNCT__ "PCBDDCSetUseExactDirichlet_BDDC" 171 static PetscErrorCode PCBDDCSetUseExactDirichlet_BDDC(PC pc,PetscBool flg) 172 { 173 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 174 175 PetscFunctionBegin; 176 pcbddc->use_exact_dirichlet_trick = flg; 177 PetscFunctionReturn(0); 178 } 179 180 #undef __FUNCT__ 181 #define __FUNCT__ "PCBDDCSetUseExactDirichlet" 182 PetscErrorCode PCBDDCSetUseExactDirichlet(PC pc,PetscBool flg) 183 { 184 PetscErrorCode ierr; 185 186 PetscFunctionBegin; 187 PetscValidHeaderSpecific(pc,PC_CLASSID,1); 188 PetscValidLogicalCollectiveBool(pc,flg,2); 189 ierr = PetscTryMethod(pc,"PCBDDCSetUseExactDirichlet_C",(PC,PetscBool),(pc,flg));CHKERRQ(ierr); 190 PetscFunctionReturn(0); 191 } 192 193 #undef __FUNCT__ 194 #define __FUNCT__ "PCBDDCSetLevel_BDDC" 195 static PetscErrorCode PCBDDCSetLevel_BDDC(PC pc,PetscInt level) 196 { 197 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 198 199 PetscFunctionBegin; 200 pcbddc->current_level = level; 201 PetscFunctionReturn(0); 202 } 203 204 #undef __FUNCT__ 205 #define __FUNCT__ "PCBDDCSetLevel" 206 PetscErrorCode PCBDDCSetLevel(PC pc,PetscInt level) 207 { 208 PetscErrorCode ierr; 209 210 PetscFunctionBegin; 211 PetscValidHeaderSpecific(pc,PC_CLASSID,1); 212 PetscValidLogicalCollectiveInt(pc,level,2); 213 ierr = PetscTryMethod(pc,"PCBDDCSetLevel_C",(PC,PetscInt),(pc,level));CHKERRQ(ierr); 214 PetscFunctionReturn(0); 215 } 216 217 #undef __FUNCT__ 218 #define __FUNCT__ "PCBDDCSetLevels_BDDC" 219 static PetscErrorCode PCBDDCSetLevels_BDDC(PC pc,PetscInt levels) 220 { 221 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 222 223 PetscFunctionBegin; 224 pcbddc->max_levels = levels; 225 PetscFunctionReturn(0); 226 } 227 228 #undef __FUNCT__ 229 #define __FUNCT__ "PCBDDCSetLevels" 230 /*@ 231 PCBDDCSetLevels - Sets the maximum number of levels for multilevel 232 233 Logically collective on PC 234 235 Input Parameters: 236 + pc - the preconditioning context 237 - levels - the maximum number of levels (max 9) 238 239 Default value is 0, i.e. traditional one-level BDDC 240 241 Level: intermediate 242 243 Notes: 244 245 .seealso: PCBDDC 246 @*/ 247 PetscErrorCode PCBDDCSetLevels(PC pc,PetscInt levels) 248 { 249 PetscErrorCode ierr; 250 251 PetscFunctionBegin; 252 PetscValidHeaderSpecific(pc,PC_CLASSID,1); 253 PetscValidLogicalCollectiveInt(pc,levels,2); 254 ierr = PetscTryMethod(pc,"PCBDDCSetLevels_C",(PC,PetscInt),(pc,levels));CHKERRQ(ierr); 255 PetscFunctionReturn(0); 256 } 257 /* -------------------------------------------------------------------------- */ 258 259 #undef __FUNCT__ 260 #define __FUNCT__ "PCBDDCSetNullSpace_BDDC" 261 static PetscErrorCode PCBDDCSetNullSpace_BDDC(PC pc,MatNullSpace NullSpace) 262 { 263 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 264 PetscErrorCode ierr; 265 266 PetscFunctionBegin; 267 ierr = PetscObjectReference((PetscObject)NullSpace);CHKERRQ(ierr); 268 ierr = MatNullSpaceDestroy(&pcbddc->NullSpace);CHKERRQ(ierr); 269 pcbddc->NullSpace = NullSpace; 270 PetscFunctionReturn(0); 271 } 272 273 #undef __FUNCT__ 274 #define __FUNCT__ "PCBDDCSetNullSpace" 275 /*@ 276 PCBDDCSetNullSpace - Set nullspace for BDDC operator 277 278 Logically collective on PC and MatNullSpace 279 280 Input Parameters: 281 + pc - the preconditioning context 282 - NullSpace - Null space of the linear operator to be preconditioned (Pmat) 283 284 Level: intermediate 285 286 Notes: 287 288 .seealso: PCBDDC 289 @*/ 290 PetscErrorCode PCBDDCSetNullSpace(PC pc,MatNullSpace NullSpace) 291 { 292 PetscErrorCode ierr; 293 294 PetscFunctionBegin; 295 PetscValidHeaderSpecific(pc,PC_CLASSID,1); 296 PetscValidHeaderSpecific(NullSpace,MAT_NULLSPACE_CLASSID,2); 297 PetscCheckSameComm(pc,1,NullSpace,2); 298 ierr = PetscTryMethod(pc,"PCBDDCSetNullSpace_C",(PC,MatNullSpace),(pc,NullSpace));CHKERRQ(ierr); 299 PetscFunctionReturn(0); 300 } 301 /* -------------------------------------------------------------------------- */ 302 303 #undef __FUNCT__ 304 #define __FUNCT__ "PCBDDCSetDirichletBoundaries_BDDC" 305 static PetscErrorCode PCBDDCSetDirichletBoundaries_BDDC(PC pc,IS DirichletBoundaries) 306 { 307 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 308 PetscErrorCode ierr; 309 310 PetscFunctionBegin; 311 ierr = ISDestroy(&pcbddc->DirichletBoundaries);CHKERRQ(ierr); 312 ierr = PetscObjectReference((PetscObject)DirichletBoundaries);CHKERRQ(ierr); 313 pcbddc->DirichletBoundaries=DirichletBoundaries; 314 PetscFunctionReturn(0); 315 } 316 317 #undef __FUNCT__ 318 #define __FUNCT__ "PCBDDCSetDirichletBoundaries" 319 /*@ 320 PCBDDCSetDirichletBoundaries - Set IS defining Dirichlet boundaries for the global problem. 321 322 Not collective 323 324 Input Parameters: 325 + pc - the preconditioning context 326 - DirichletBoundaries - sequential IS defining the subdomain part of Dirichlet boundaries (in local ordering) 327 328 Level: intermediate 329 330 Notes: 331 332 .seealso: PCBDDC 333 @*/ 334 PetscErrorCode PCBDDCSetDirichletBoundaries(PC pc,IS DirichletBoundaries) 335 { 336 PetscErrorCode ierr; 337 338 PetscFunctionBegin; 339 PetscValidHeaderSpecific(pc,PC_CLASSID,1); 340 PetscValidHeaderSpecific(DirichletBoundaries,IS_CLASSID,2); 341 ierr = PetscTryMethod(pc,"PCBDDCSetDirichletBoundaries_C",(PC,IS),(pc,DirichletBoundaries));CHKERRQ(ierr); 342 PetscFunctionReturn(0); 343 } 344 /* -------------------------------------------------------------------------- */ 345 346 #undef __FUNCT__ 347 #define __FUNCT__ "PCBDDCSetNeumannBoundaries_BDDC" 348 static PetscErrorCode PCBDDCSetNeumannBoundaries_BDDC(PC pc,IS NeumannBoundaries) 349 { 350 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 351 PetscErrorCode ierr; 352 353 PetscFunctionBegin; 354 ierr = ISDestroy(&pcbddc->NeumannBoundaries);CHKERRQ(ierr); 355 ierr = PetscObjectReference((PetscObject)NeumannBoundaries);CHKERRQ(ierr); 356 pcbddc->NeumannBoundaries=NeumannBoundaries; 357 PetscFunctionReturn(0); 358 } 359 360 #undef __FUNCT__ 361 #define __FUNCT__ "PCBDDCSetNeumannBoundaries" 362 /*@ 363 PCBDDCSetNeumannBoundaries - Set IS defining Neumann boundaries for the global problem. 364 365 Not collective 366 367 Input Parameters: 368 + pc - the preconditioning context 369 - NeumannBoundaries - sequential IS defining the subdomain part of Neumann boundaries (in local ordering) 370 371 Level: intermediate 372 373 Notes: 374 375 .seealso: PCBDDC 376 @*/ 377 PetscErrorCode PCBDDCSetNeumannBoundaries(PC pc,IS NeumannBoundaries) 378 { 379 PetscErrorCode ierr; 380 381 PetscFunctionBegin; 382 PetscValidHeaderSpecific(pc,PC_CLASSID,1); 383 PetscValidHeaderSpecific(NeumannBoundaries,IS_CLASSID,2); 384 ierr = PetscTryMethod(pc,"PCBDDCSetNeumannBoundaries_C",(PC,IS),(pc,NeumannBoundaries));CHKERRQ(ierr); 385 PetscFunctionReturn(0); 386 } 387 /* -------------------------------------------------------------------------- */ 388 389 #undef __FUNCT__ 390 #define __FUNCT__ "PCBDDCGetDirichletBoundaries_BDDC" 391 static PetscErrorCode PCBDDCGetDirichletBoundaries_BDDC(PC pc,IS *DirichletBoundaries) 392 { 393 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 394 395 PetscFunctionBegin; 396 *DirichletBoundaries = pcbddc->DirichletBoundaries; 397 PetscFunctionReturn(0); 398 } 399 400 #undef __FUNCT__ 401 #define __FUNCT__ "PCBDDCGetDirichletBoundaries" 402 /*@ 403 PCBDDCGetDirichletBoundaries - Get IS for local Dirichlet boundaries 404 405 Not collective 406 407 Input Parameters: 408 . pc - the preconditioning context 409 410 Output Parameters: 411 . DirichletBoundaries - index set defining the subdomain part of Dirichlet boundaries 412 413 Level: intermediate 414 415 Notes: 416 417 .seealso: PCBDDC 418 @*/ 419 PetscErrorCode PCBDDCGetDirichletBoundaries(PC pc,IS *DirichletBoundaries) 420 { 421 PetscErrorCode ierr; 422 423 PetscFunctionBegin; 424 PetscValidHeaderSpecific(pc,PC_CLASSID,1); 425 ierr = PetscUseMethod(pc,"PCBDDCGetDirichletBoundaries_C",(PC,IS*),(pc,DirichletBoundaries));CHKERRQ(ierr); 426 PetscFunctionReturn(0); 427 } 428 /* -------------------------------------------------------------------------- */ 429 430 #undef __FUNCT__ 431 #define __FUNCT__ "PCBDDCGetNeumannBoundaries_BDDC" 432 static PetscErrorCode PCBDDCGetNeumannBoundaries_BDDC(PC pc,IS *NeumannBoundaries) 433 { 434 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 435 436 PetscFunctionBegin; 437 *NeumannBoundaries = pcbddc->NeumannBoundaries; 438 PetscFunctionReturn(0); 439 } 440 441 #undef __FUNCT__ 442 #define __FUNCT__ "PCBDDCGetNeumannBoundaries" 443 /*@ 444 PCBDDCGetNeumannBoundaries - Get IS for local Neumann boundaries 445 446 Not collective 447 448 Input Parameters: 449 . pc - the preconditioning context 450 451 Output Parameters: 452 . NeumannBoundaries - index set defining the subdomain part of Neumann boundaries 453 454 Level: intermediate 455 456 Notes: 457 458 .seealso: PCBDDC 459 @*/ 460 PetscErrorCode PCBDDCGetNeumannBoundaries(PC pc,IS *NeumannBoundaries) 461 { 462 PetscErrorCode ierr; 463 464 PetscFunctionBegin; 465 PetscValidHeaderSpecific(pc,PC_CLASSID,1); 466 ierr = PetscUseMethod(pc,"PCBDDCGetNeumannBoundaries_C",(PC,IS*),(pc,NeumannBoundaries));CHKERRQ(ierr); 467 PetscFunctionReturn(0); 468 } 469 /* -------------------------------------------------------------------------- */ 470 471 #undef __FUNCT__ 472 #define __FUNCT__ "PCBDDCSetLocalAdjacencyGraph_BDDC" 473 static PetscErrorCode PCBDDCSetLocalAdjacencyGraph_BDDC(PC pc, PetscInt nvtxs,const PetscInt xadj[],const PetscInt adjncy[], PetscCopyMode copymode) 474 { 475 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 476 PCBDDCGraph mat_graph = pcbddc->mat_graph; 477 PetscErrorCode ierr; 478 479 PetscFunctionBegin; 480 /* free old CSR */ 481 ierr = PCBDDCGraphResetCSR(mat_graph);CHKERRQ(ierr); 482 /* TODO: PCBDDCGraphSetAdjacency */ 483 /* get CSR into graph structure */ 484 if (copymode == PETSC_COPY_VALUES) { 485 ierr = PetscMalloc((nvtxs+1)*sizeof(PetscInt),&mat_graph->xadj);CHKERRQ(ierr); 486 ierr = PetscMalloc(xadj[nvtxs]*sizeof(PetscInt),&mat_graph->adjncy);CHKERRQ(ierr); 487 ierr = PetscMemcpy(mat_graph->xadj,xadj,(nvtxs+1)*sizeof(PetscInt));CHKERRQ(ierr); 488 ierr = PetscMemcpy(mat_graph->adjncy,adjncy,xadj[nvtxs]*sizeof(PetscInt));CHKERRQ(ierr); 489 } else if (copymode == PETSC_OWN_POINTER) { 490 mat_graph->xadj = (PetscInt*)xadj; 491 mat_graph->adjncy = (PetscInt*)adjncy; 492 } 493 mat_graph->nvtxs_csr = nvtxs; 494 PetscFunctionReturn(0); 495 } 496 497 #undef __FUNCT__ 498 #define __FUNCT__ "PCBDDCSetLocalAdjacencyGraph" 499 /*@ 500 PCBDDCSetLocalAdjacencyGraph - Set adjacency structure (CSR graph) of the local Neumann matrix 501 502 Not collective 503 504 Input Parameters: 505 + pc - the preconditioning context 506 . nvtxs - number of local vertices of the graph (i.e., the local size of your problem) 507 . xadj, adjncy - the CSR graph 508 - copymode - either PETSC_COPY_VALUES or PETSC_OWN_POINTER. 509 510 Level: intermediate 511 512 Notes: 513 514 .seealso: PCBDDC,PetscCopyMode 515 @*/ 516 PetscErrorCode PCBDDCSetLocalAdjacencyGraph(PC pc,PetscInt nvtxs,const PetscInt xadj[],const PetscInt adjncy[], PetscCopyMode copymode) 517 { 518 void (*f)(void) = 0; 519 PetscErrorCode ierr; 520 521 PetscFunctionBegin; 522 PetscValidHeaderSpecific(pc,PC_CLASSID,1); 523 PetscValidIntPointer(xadj,3); 524 PetscValidIntPointer(xadj,4); 525 if (copymode != PETSC_COPY_VALUES && copymode != PETSC_OWN_POINTER) { 526 SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Unsupported copy mode %d in %s\n",copymode,__FUNCT__); 527 } 528 ierr = PetscTryMethod(pc,"PCBDDCSetLocalAdjacencyGraph_C",(PC,PetscInt,const PetscInt[],const PetscInt[],PetscCopyMode),(pc,nvtxs,xadj,adjncy,copymode));CHKERRQ(ierr); 529 /* free arrays if PCBDDC is not the PC type */ 530 ierr = PetscObjectQueryFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",&f);CHKERRQ(ierr); 531 if (!f && copymode == PETSC_OWN_POINTER) { 532 ierr = PetscFree(xadj);CHKERRQ(ierr); 533 ierr = PetscFree(adjncy);CHKERRQ(ierr); 534 } 535 PetscFunctionReturn(0); 536 } 537 /* -------------------------------------------------------------------------- */ 538 539 #undef __FUNCT__ 540 #define __FUNCT__ "PCBDDCSetDofsSplitting_BDDC" 541 static PetscErrorCode PCBDDCSetDofsSplitting_BDDC(PC pc,PetscInt n_is, IS ISForDofs[]) 542 { 543 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 544 PetscInt i; 545 PetscErrorCode ierr; 546 547 PetscFunctionBegin; 548 /* Destroy ISes if they were already set */ 549 for (i=0;i<pcbddc->n_ISForDofs;i++) { 550 ierr = ISDestroy(&pcbddc->ISForDofs[i]);CHKERRQ(ierr); 551 } 552 ierr = PetscFree(pcbddc->ISForDofs);CHKERRQ(ierr); 553 /* allocate space then set */ 554 ierr = PetscMalloc(n_is*sizeof(IS),&pcbddc->ISForDofs);CHKERRQ(ierr); 555 for (i=0;i<n_is;i++) { 556 ierr = PetscObjectReference((PetscObject)ISForDofs[i]);CHKERRQ(ierr); 557 pcbddc->ISForDofs[i]=ISForDofs[i]; 558 } 559 pcbddc->n_ISForDofs=n_is; 560 pcbddc->user_provided_isfordofs = PETSC_TRUE; 561 PetscFunctionReturn(0); 562 } 563 564 #undef __FUNCT__ 565 #define __FUNCT__ "PCBDDCSetDofsSplitting" 566 /*@ 567 PCBDDCSetDofsSplitting - Set index sets defining fields of the local Neumann matrix 568 569 Not collective 570 571 Input Parameters: 572 + pc - the preconditioning context 573 - n_is - number of index sets defining the fields 574 . ISForDofs - array of IS describing the fields 575 576 Level: intermediate 577 578 Notes: 579 580 .seealso: PCBDDC 581 @*/ 582 PetscErrorCode PCBDDCSetDofsSplitting(PC pc,PetscInt n_is, IS ISForDofs[]) 583 { 584 PetscInt i; 585 PetscErrorCode ierr; 586 587 PetscFunctionBegin; 588 PetscValidHeaderSpecific(pc,PC_CLASSID,1); 589 for (i=0;i<n_is;i++) { 590 PetscValidHeaderSpecific(ISForDofs[i],IS_CLASSID,2); 591 } 592 ierr = PetscTryMethod(pc,"PCBDDCSetDofsSplitting_C",(PC,PetscInt,IS[]),(pc,n_is,ISForDofs));CHKERRQ(ierr); 593 PetscFunctionReturn(0); 594 } 595 /* -------------------------------------------------------------------------- */ 596 #undef __FUNCT__ 597 #define __FUNCT__ "PCPreSolve_BDDC" 598 /* -------------------------------------------------------------------------- */ 599 /* 600 PCPreSolve_BDDC - Changes the right hand side and (if necessary) the initial 601 guess if a transformation of basis approach has been selected. 602 603 Input Parameter: 604 + pc - the preconditioner contex 605 606 Application Interface Routine: PCPreSolve() 607 608 Notes: 609 The interface routine PCPreSolve() is not usually called directly by 610 the user, but instead is called by KSPSolve(). 611 */ 612 static PetscErrorCode PCPreSolve_BDDC(PC pc, KSP ksp, Vec rhs, Vec x) 613 { 614 PetscErrorCode ierr; 615 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 616 PC_IS *pcis = (PC_IS*)(pc->data); 617 Mat_IS *matis = (Mat_IS*)pc->pmat->data; 618 Mat temp_mat; 619 IS dirIS; 620 PetscInt dirsize,i,*is_indices; 621 PetscScalar *array_x,*array_diagonal; 622 Vec used_vec; 623 PetscBool guess_nonzero,flg,bddc_has_dirichlet_boundaries; 624 625 PetscFunctionBegin; 626 /* if we are working with cg, one dirichlet solve can be avoided during Krylov iterations */ 627 if (ksp) { 628 PetscBool iscg; 629 ierr = PetscObjectTypeCompare((PetscObject)ksp,KSPCG,&iscg);CHKERRQ(ierr); 630 if (!iscg) { 631 ierr = PCBDDCSetUseExactDirichlet(pc,PETSC_FALSE);CHKERRQ(ierr); 632 } 633 } 634 /* Creates parallel work vectors used in presolve */ 635 if (!pcbddc->original_rhs) { 636 ierr = VecDuplicate(pcis->vec1_global,&pcbddc->original_rhs);CHKERRQ(ierr); 637 } 638 if (!pcbddc->temp_solution) { 639 ierr = VecDuplicate(pcis->vec1_global,&pcbddc->temp_solution);CHKERRQ(ierr); 640 } 641 if (x) { 642 ierr = PetscObjectReference((PetscObject)x);CHKERRQ(ierr); 643 used_vec = x; 644 } else { 645 ierr = PetscObjectReference((PetscObject)pcbddc->temp_solution);CHKERRQ(ierr); 646 used_vec = pcbddc->temp_solution; 647 ierr = VecSet(used_vec,0.0);CHKERRQ(ierr); 648 } 649 /* hack into ksp data structure PCPreSolve comes earlier in src/ksp/ksp/interface/itfunc.c */ 650 if (ksp) { 651 ierr = KSPGetInitialGuessNonzero(ksp,&guess_nonzero);CHKERRQ(ierr); 652 if (!guess_nonzero) { 653 ierr = VecSet(used_vec,0.0);CHKERRQ(ierr); 654 } 655 } 656 657 /* TODO: remove when Dirichlet boundaries will be shared */ 658 ierr = PCBDDCGetDirichletBoundaries(pc,&dirIS);CHKERRQ(ierr); 659 flg = PETSC_FALSE; 660 if (dirIS) flg = PETSC_TRUE; 661 ierr = MPI_Allreduce(&flg,&bddc_has_dirichlet_boundaries,1,MPIU_BOOL,MPI_LOR,PetscObjectComm((PetscObject)pc));CHKERRQ(ierr); 662 663 /* store the original rhs */ 664 ierr = VecCopy(rhs,pcbddc->original_rhs);CHKERRQ(ierr); 665 666 /* Take into account zeroed rows -> change rhs and store solution removed */ 667 if (rhs && bddc_has_dirichlet_boundaries) { 668 ierr = MatGetDiagonal(pc->pmat,pcis->vec1_global);CHKERRQ(ierr); 669 ierr = VecPointwiseDivide(pcis->vec1_global,rhs,pcis->vec1_global);CHKERRQ(ierr); 670 ierr = VecScatterBegin(matis->ctx,pcis->vec1_global,pcis->vec2_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 671 ierr = VecScatterEnd(matis->ctx,pcis->vec1_global,pcis->vec2_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 672 ierr = VecScatterBegin(matis->ctx,used_vec,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 673 ierr = VecScatterEnd(matis->ctx,used_vec,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 674 if (dirIS) { 675 ierr = ISGetSize(dirIS,&dirsize);CHKERRQ(ierr); 676 ierr = VecGetArray(pcis->vec1_N,&array_x);CHKERRQ(ierr); 677 ierr = VecGetArray(pcis->vec2_N,&array_diagonal);CHKERRQ(ierr); 678 ierr = ISGetIndices(dirIS,(const PetscInt**)&is_indices);CHKERRQ(ierr); 679 for (i=0; i<dirsize; i++) array_x[is_indices[i]] = array_diagonal[is_indices[i]]; 680 ierr = ISRestoreIndices(dirIS,(const PetscInt**)&is_indices);CHKERRQ(ierr); 681 ierr = VecRestoreArray(pcis->vec2_N,&array_diagonal);CHKERRQ(ierr); 682 ierr = VecRestoreArray(pcis->vec1_N,&array_x);CHKERRQ(ierr); 683 } 684 ierr = VecScatterBegin(matis->ctx,pcis->vec1_N,used_vec,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 685 ierr = VecScatterEnd(matis->ctx,pcis->vec1_N,used_vec,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 686 687 /* remove the computed solution from the rhs */ 688 ierr = VecScale(used_vec,-1.0);CHKERRQ(ierr); 689 ierr = MatMultAdd(pc->pmat,used_vec,rhs,rhs);CHKERRQ(ierr); 690 ierr = VecScale(used_vec,-1.0);CHKERRQ(ierr); 691 } 692 693 /* store partially computed solution and set initial guess */ 694 if (x) { 695 ierr = VecCopy(used_vec,pcbddc->temp_solution);CHKERRQ(ierr); 696 ierr = VecSet(used_vec,0.0);CHKERRQ(ierr); 697 if (pcbddc->use_exact_dirichlet_trick) { 698 ierr = VecScatterBegin(pcis->global_to_D,rhs,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 699 ierr = VecScatterEnd (pcis->global_to_D,rhs,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 700 ierr = KSPSolve(pcbddc->ksp_D,pcis->vec1_D,pcis->vec2_D);CHKERRQ(ierr); 701 ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,used_vec,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 702 ierr = VecScatterEnd (pcis->global_to_D,pcis->vec2_D,used_vec,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 703 if (ksp) { 704 ierr = KSPSetInitialGuessNonzero(ksp,PETSC_TRUE);CHKERRQ(ierr); 705 } 706 } 707 } 708 709 /* prepare MatMult and rhs for solver */ 710 if (pcbddc->use_change_of_basis) { 711 /* swap pointers for local matrices */ 712 temp_mat = matis->A; 713 matis->A = pcbddc->local_mat; 714 pcbddc->local_mat = temp_mat; 715 if (rhs) { 716 /* Get local rhs and apply transformation of basis */ 717 ierr = VecScatterBegin(pcis->global_to_B,rhs,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 718 ierr = VecScatterEnd (pcis->global_to_B,rhs,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 719 /* from original basis to modified basis */ 720 ierr = MatMultTranspose(pcbddc->ChangeOfBasisMatrix,pcis->vec1_B,pcis->vec2_B);CHKERRQ(ierr); 721 /* put back modified values into the global vec using INSERT_VALUES copy mode */ 722 ierr = VecScatterBegin(pcis->global_to_B,pcis->vec2_B,rhs,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 723 ierr = VecScatterEnd (pcis->global_to_B,pcis->vec2_B,rhs,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 724 } 725 } 726 727 /* remove nullspace if present */ 728 if (ksp && pcbddc->NullSpace) { 729 ierr = MatNullSpaceRemove(pcbddc->NullSpace,used_vec);CHKERRQ(ierr); 730 ierr = MatNullSpaceRemove(pcbddc->NullSpace,rhs);CHKERRQ(ierr); 731 } 732 ierr = VecDestroy(&used_vec);CHKERRQ(ierr); 733 PetscFunctionReturn(0); 734 } 735 /* -------------------------------------------------------------------------- */ 736 #undef __FUNCT__ 737 #define __FUNCT__ "PCPostSolve_BDDC" 738 /* -------------------------------------------------------------------------- */ 739 /* 740 PCPostSolve_BDDC - Changes the computed solution if a transformation of basis 741 approach has been selected. Also, restores rhs to its original state. 742 743 Input Parameter: 744 + pc - the preconditioner contex 745 746 Application Interface Routine: PCPostSolve() 747 748 Notes: 749 The interface routine PCPostSolve() is not usually called directly by 750 the user, but instead is called by KSPSolve(). 751 */ 752 static PetscErrorCode PCPostSolve_BDDC(PC pc, KSP ksp, Vec rhs, Vec x) 753 { 754 PetscErrorCode ierr; 755 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 756 PC_IS *pcis = (PC_IS*)(pc->data); 757 Mat_IS *matis = (Mat_IS*)pc->pmat->data; 758 Mat temp_mat; 759 760 PetscFunctionBegin; 761 if (pcbddc->use_change_of_basis) { 762 /* swap pointers for local matrices */ 763 temp_mat = matis->A; 764 matis->A = pcbddc->local_mat; 765 pcbddc->local_mat = temp_mat; 766 } 767 if (pcbddc->use_change_of_basis && x) { 768 /* Get Local boundary and apply transformation of basis to solution vector */ 769 ierr = VecScatterBegin(pcis->global_to_B,x,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 770 ierr = VecScatterEnd (pcis->global_to_B,x,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 771 /* from modified basis to original basis */ 772 ierr = MatMult(pcbddc->ChangeOfBasisMatrix,pcis->vec1_B,pcis->vec2_B);CHKERRQ(ierr); 773 /* put back modified values into the global vec using INSERT_VALUES copy mode */ 774 ierr = VecScatterBegin(pcis->global_to_B,pcis->vec2_B,x,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 775 ierr = VecScatterEnd (pcis->global_to_B,pcis->vec2_B,x,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 776 } 777 /* add solution removed in presolve */ 778 if (x) { 779 ierr = VecAXPY(x,1.0,pcbddc->temp_solution);CHKERRQ(ierr); 780 } 781 /* restore rhs to its original state */ 782 if (rhs) { 783 ierr = VecCopy(pcbddc->original_rhs,rhs);CHKERRQ(ierr); 784 } 785 PetscFunctionReturn(0); 786 } 787 /* -------------------------------------------------------------------------- */ 788 #undef __FUNCT__ 789 #define __FUNCT__ "PCSetUp_BDDC" 790 /* -------------------------------------------------------------------------- */ 791 /* 792 PCSetUp_BDDC - Prepares for the use of the BDDC preconditioner 793 by setting data structures and options. 794 795 Input Parameter: 796 + pc - the preconditioner context 797 798 Application Interface Routine: PCSetUp() 799 800 Notes: 801 The interface routine PCSetUp() is not usually called directly by 802 the user, but instead is called by PCApply() if necessary. 803 */ 804 PetscErrorCode PCSetUp_BDDC(PC pc) 805 { 806 PetscErrorCode ierr; 807 PC_BDDC* pcbddc = (PC_BDDC*)pc->data; 808 MatStructure flag; 809 PetscBool computeis,computetopography,computesolvers; 810 811 PetscFunctionBegin; 812 /* the following lines of code should be replaced by a better logic between PCIS, PCNN, PCBDDC and other nonoverlapping preconditioners */ 813 /* PCIS does not support MatStructures different from SAME_PRECONDITIONER */ 814 /* For BDDC we need to define a local "Neumann" problem different to that defined in PCISSetup 815 Also, BDDC directly build the Dirichlet problem */ 816 /* Get stdout for dbg */ 817 if (pcbddc->dbg_flag && !pcbddc->dbg_viewer) { 818 ierr = PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)pc),&pcbddc->dbg_viewer);CHKERRQ(ierr); 819 ierr = PetscViewerASCIISynchronizedAllow(pcbddc->dbg_viewer,PETSC_TRUE);CHKERRQ(ierr); 820 if (pcbddc->current_level) { 821 ierr = PetscViewerASCIIAddTab(pcbddc->dbg_viewer,2);CHKERRQ(ierr); 822 } 823 } 824 /* first attempt to split work */ 825 if (pc->setupcalled) { 826 computeis = PETSC_FALSE; 827 ierr = PCGetOperators(pc,NULL,NULL,&flag);CHKERRQ(ierr); 828 if (flag == SAME_PRECONDITIONER) { 829 computetopography = PETSC_FALSE; 830 computesolvers = PETSC_FALSE; 831 } else if (flag == SAME_NONZERO_PATTERN) { 832 computetopography = PETSC_FALSE; 833 computesolvers = PETSC_TRUE; 834 } else { /* DIFFERENT_NONZERO_PATTERN */ 835 computetopography = PETSC_TRUE; 836 computesolvers = PETSC_TRUE; 837 } 838 } else { 839 computeis = PETSC_TRUE; 840 computetopography = PETSC_TRUE; 841 computesolvers = PETSC_TRUE; 842 } 843 /* Set up all the "iterative substructuring" common block without computing solvers */ 844 if (computeis) { 845 /* HACK INTO PCIS */ 846 PC_IS* pcis = (PC_IS*)pc->data; 847 pcis->computesolvers = PETSC_FALSE; 848 ierr = PCISSetUp(pc);CHKERRQ(ierr); 849 } 850 /* Analyze interface and set up local constraint and change of basis matrices */ 851 if (computetopography) { 852 ierr = PCBDDCAnalyzeInterface(pc);CHKERRQ(ierr); 853 ierr = PCBDDCConstraintsSetUp(pc);CHKERRQ(ierr); 854 } 855 if (computesolvers) { 856 /* reset data */ 857 ierr = PCBDDCResetSolvers(pc);CHKERRQ(ierr); 858 ierr = PCBDDCScalingDestroy(pc);CHKERRQ(ierr); 859 /* Create coarse and local stuffs */ 860 ierr = PCBDDCSetUpSolvers(pc);CHKERRQ(ierr); 861 ierr = PCBDDCScalingSetUp(pc);CHKERRQ(ierr); 862 } 863 if (pcbddc->dbg_flag && pcbddc->current_level) { 864 ierr = PetscViewerASCIISubtractTab(pcbddc->dbg_viewer,2);CHKERRQ(ierr); 865 } 866 PetscFunctionReturn(0); 867 } 868 869 /* -------------------------------------------------------------------------- */ 870 /* 871 PCApply_BDDC - Applies the BDDC preconditioner to a vector. 872 873 Input Parameters: 874 . pc - the preconditioner context 875 . r - input vector (global) 876 877 Output Parameter: 878 . z - output vector (global) 879 880 Application Interface Routine: PCApply() 881 */ 882 #undef __FUNCT__ 883 #define __FUNCT__ "PCApply_BDDC" 884 PetscErrorCode PCApply_BDDC(PC pc,Vec r,Vec z) 885 { 886 PC_IS *pcis = (PC_IS*)(pc->data); 887 PC_BDDC *pcbddc = (PC_BDDC*)(pc->data); 888 PetscErrorCode ierr; 889 const PetscScalar one = 1.0; 890 const PetscScalar m_one = -1.0; 891 const PetscScalar zero = 0.0; 892 893 /* This code is similar to that provided in nn.c for PCNN 894 NN interface preconditioner changed to BDDC 895 Added support for M_3 preconditioner in the reference article (code is active if pcbddc->switch_static = PETSC_TRUE) */ 896 897 PetscFunctionBegin; 898 if (!pcbddc->use_exact_dirichlet_trick) { 899 /* First Dirichlet solve */ 900 ierr = VecScatterBegin(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 901 ierr = VecScatterEnd (pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 902 ierr = KSPSolve(pcbddc->ksp_D,pcis->vec1_D,pcis->vec2_D);CHKERRQ(ierr); 903 /* 904 Assembling right hand side for BDDC operator 905 - pcis->vec1_D for the Dirichlet part (if needed, i.e. prec_flag=PETSC_TRUE) 906 - pcis->vec1_B the interface part of the global vector z 907 */ 908 ierr = VecScale(pcis->vec2_D,m_one);CHKERRQ(ierr); 909 ierr = MatMult(pcis->A_BI,pcis->vec2_D,pcis->vec1_B);CHKERRQ(ierr); 910 if (pcbddc->switch_static) { ierr = MatMultAdd(pcis->A_II,pcis->vec2_D,pcis->vec1_D,pcis->vec1_D);CHKERRQ(ierr); } 911 ierr = VecScale(pcis->vec2_D,m_one);CHKERRQ(ierr); 912 ierr = VecCopy(r,z);CHKERRQ(ierr); 913 ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 914 ierr = VecScatterEnd (pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 915 ierr = PCBDDCScalingRestriction(pc,z,pcis->vec1_B);CHKERRQ(ierr); 916 } else { 917 ierr = VecSet(pcis->vec1_D,zero);CHKERRQ(ierr); 918 ierr = VecSet(pcis->vec2_D,zero);CHKERRQ(ierr); 919 ierr = PCBDDCScalingRestriction(pc,r,pcis->vec1_B);CHKERRQ(ierr); 920 } 921 922 /* Apply interface preconditioner 923 input/output vecs: pcis->vec1_B and pcis->vec1_D */ 924 ierr = PCBDDCApplyInterfacePreconditioner(pc);CHKERRQ(ierr); 925 926 /* Apply transpose of partition of unity operator */ 927 ierr = PCBDDCScalingExtension(pc,pcis->vec1_B,z);CHKERRQ(ierr); 928 929 /* Second Dirichlet solve and assembling of output */ 930 ierr = VecScatterBegin(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 931 ierr = VecScatterEnd (pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 932 ierr = MatMult(pcis->A_IB,pcis->vec1_B,pcis->vec3_D);CHKERRQ(ierr); 933 if (pcbddc->switch_static) { ierr = MatMultAdd(pcis->A_II,pcis->vec1_D,pcis->vec3_D,pcis->vec3_D);CHKERRQ(ierr); } 934 ierr = KSPSolve(pcbddc->ksp_D,pcis->vec3_D,pcbddc->vec4_D);CHKERRQ(ierr); 935 ierr = VecScale(pcbddc->vec4_D,m_one);CHKERRQ(ierr); 936 if (pcbddc->switch_static) { ierr = VecAXPY (pcbddc->vec4_D,one,pcis->vec1_D);CHKERRQ(ierr); } 937 ierr = VecAXPY (pcis->vec2_D,one,pcbddc->vec4_D);CHKERRQ(ierr); 938 ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 939 ierr = VecScatterEnd (pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 940 PetscFunctionReturn(0); 941 } 942 /* -------------------------------------------------------------------------- */ 943 944 #undef __FUNCT__ 945 #define __FUNCT__ "PCDestroy_BDDC" 946 PetscErrorCode PCDestroy_BDDC(PC pc) 947 { 948 PC_BDDC *pcbddc = (PC_BDDC*)pc->data; 949 PetscErrorCode ierr; 950 951 PetscFunctionBegin; 952 /* free data created by PCIS */ 953 ierr = PCISDestroy(pc);CHKERRQ(ierr); 954 /* free BDDC custom data */ 955 ierr = PCBDDCResetCustomization(pc);CHKERRQ(ierr); 956 /* destroy objects related to topography */ 957 ierr = PCBDDCResetTopography(pc);CHKERRQ(ierr); 958 /* free allocated graph structure */ 959 ierr = PetscFree(pcbddc->mat_graph);CHKERRQ(ierr); 960 /* free data for scaling operator */ 961 ierr = PCBDDCScalingDestroy(pc);CHKERRQ(ierr); 962 /* free solvers stuff */ 963 ierr = PCBDDCResetSolvers(pc);CHKERRQ(ierr); 964 ierr = KSPDestroy(&pcbddc->ksp_D);CHKERRQ(ierr); 965 ierr = KSPDestroy(&pcbddc->ksp_R);CHKERRQ(ierr); 966 ierr = KSPDestroy(&pcbddc->coarse_ksp);CHKERRQ(ierr); 967 ierr = MatDestroy(&pcbddc->local_mat);CHKERRQ(ierr); 968 /* free global vectors needed in presolve */ 969 ierr = VecDestroy(&pcbddc->temp_solution);CHKERRQ(ierr); 970 ierr = VecDestroy(&pcbddc->original_rhs);CHKERRQ(ierr); 971 /* remove functions */ 972 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetPrimalVerticesLocalIS_C",NULL);CHKERRQ(ierr); 973 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetCoarseningRatio_C",NULL);CHKERRQ(ierr); 974 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevel_C",NULL);CHKERRQ(ierr); 975 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetUseExactDirichlet_C",NULL);CHKERRQ(ierr); 976 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevels_C",NULL);CHKERRQ(ierr); 977 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNullSpace_C",NULL);CHKERRQ(ierr); 978 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundaries_C",NULL);CHKERRQ(ierr); 979 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundaries_C",NULL);CHKERRQ(ierr); 980 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundaries_C",NULL);CHKERRQ(ierr); 981 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundaries_C",NULL);CHKERRQ(ierr); 982 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplitting_C",NULL);CHKERRQ(ierr); 983 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",NULL);CHKERRQ(ierr); 984 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCCreateFETIDPOperators_C",NULL);CHKERRQ(ierr); 985 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetRHS_C",NULL);CHKERRQ(ierr); 986 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetSolution_C",NULL);CHKERRQ(ierr); 987 /* Free the private data structure */ 988 ierr = PetscFree(pc->data);CHKERRQ(ierr); 989 PetscFunctionReturn(0); 990 } 991 /* -------------------------------------------------------------------------- */ 992 993 #undef __FUNCT__ 994 #define __FUNCT__ "PCBDDCMatFETIDPGetRHS_BDDC" 995 static PetscErrorCode PCBDDCMatFETIDPGetRHS_BDDC(Mat fetidp_mat, Vec standard_rhs, Vec fetidp_flux_rhs) 996 { 997 FETIDPMat_ctx mat_ctx; 998 PC_IS* pcis; 999 PC_BDDC* pcbddc; 1000 PetscErrorCode ierr; 1001 1002 PetscFunctionBegin; 1003 ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr); 1004 pcis = (PC_IS*)mat_ctx->pc->data; 1005 pcbddc = (PC_BDDC*)mat_ctx->pc->data; 1006 1007 /* change of basis for physical rhs if needed 1008 It also changes the rhs in case of dirichlet boundaries */ 1009 ierr = PCPreSolve_BDDC(mat_ctx->pc,NULL,standard_rhs,NULL);CHKERRQ(ierr); 1010 /* store vectors for computation of fetidp final solution */ 1011 ierr = VecScatterBegin(pcis->global_to_D,standard_rhs,mat_ctx->temp_solution_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1012 ierr = VecScatterEnd(pcis->global_to_D,standard_rhs,mat_ctx->temp_solution_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1013 /* scale rhs since it should be unassembled */ 1014 /* TODO use counter scaling? (also below) */ 1015 ierr = VecScatterBegin(pcis->global_to_B,standard_rhs,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1016 ierr = VecScatterEnd(pcis->global_to_B,standard_rhs,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1017 /* Apply partition of unity */ 1018 ierr = VecPointwiseMult(mat_ctx->temp_solution_B,pcis->D,mat_ctx->temp_solution_B);CHKERRQ(ierr); 1019 /* ierr = PCBDDCScalingRestriction(mat_ctx->pc,standard_rhs,mat_ctx->temp_solution_B);CHKERRQ(ierr); */ 1020 if (!pcbddc->switch_static) { 1021 /* compute partially subassembled Schur complement right-hand side */ 1022 ierr = KSPSolve(pcbddc->ksp_D,mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr); 1023 ierr = MatMult(pcis->A_BI,pcis->vec1_D,pcis->vec1_B);CHKERRQ(ierr); 1024 ierr = VecAXPY(mat_ctx->temp_solution_B,-1.0,pcis->vec1_B);CHKERRQ(ierr); 1025 ierr = VecSet(standard_rhs,0.0);CHKERRQ(ierr); 1026 ierr = VecScatterBegin(pcis->global_to_B,mat_ctx->temp_solution_B,standard_rhs,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 1027 ierr = VecScatterEnd(pcis->global_to_B,mat_ctx->temp_solution_B,standard_rhs,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 1028 /* ierr = PCBDDCScalingRestriction(mat_ctx->pc,standard_rhs,mat_ctx->temp_solution_B);CHKERRQ(ierr); */ 1029 ierr = VecScatterBegin(pcis->global_to_B,standard_rhs,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1030 ierr = VecScatterEnd(pcis->global_to_B,standard_rhs,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1031 ierr = VecPointwiseMult(mat_ctx->temp_solution_B,pcis->D,mat_ctx->temp_solution_B);CHKERRQ(ierr); 1032 } 1033 /* BDDC rhs */ 1034 ierr = VecCopy(mat_ctx->temp_solution_B,pcis->vec1_B);CHKERRQ(ierr); 1035 if (pcbddc->switch_static) { 1036 ierr = VecCopy(mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr); 1037 } 1038 /* apply BDDC */ 1039 ierr = PCBDDCApplyInterfacePreconditioner(mat_ctx->pc);CHKERRQ(ierr); 1040 /* Application of B_delta and assembling of rhs for fetidp fluxes */ 1041 ierr = VecSet(fetidp_flux_rhs,0.0);CHKERRQ(ierr); 1042 ierr = MatMult(mat_ctx->B_delta,pcis->vec1_B,mat_ctx->lambda_local);CHKERRQ(ierr); 1043 ierr = VecScatterBegin(mat_ctx->l2g_lambda,mat_ctx->lambda_local,fetidp_flux_rhs,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1044 ierr = VecScatterEnd (mat_ctx->l2g_lambda,mat_ctx->lambda_local,fetidp_flux_rhs,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1045 /* restore original rhs */ 1046 ierr = VecCopy(pcbddc->original_rhs,standard_rhs);CHKERRQ(ierr); 1047 PetscFunctionReturn(0); 1048 } 1049 1050 #undef __FUNCT__ 1051 #define __FUNCT__ "PCBDDCMatFETIDPGetRHS" 1052 /*@ 1053 PCBDDCMatFETIDPGetRHS - Compute the right-hand side for FETIDP linear system 1054 1055 Collective 1056 1057 Input Parameters: 1058 + fetidp_mat - the FETIDP matrix object obtained by calling PCBDDCCreateFETIDPOperators 1059 . standard_rhs - the right-hand side for your linear system 1060 1061 Output Parameters: 1062 - fetidp_flux_rhs - the right-hand side for the FETIDP linear system 1063 1064 Level: developer 1065 1066 Notes: 1067 1068 .seealso: PCBDDC,PCBDDCCreateFETIDPOperators 1069 @*/ 1070 PetscErrorCode PCBDDCMatFETIDPGetRHS(Mat fetidp_mat, Vec standard_rhs, Vec fetidp_flux_rhs) 1071 { 1072 FETIDPMat_ctx mat_ctx; 1073 PetscErrorCode ierr; 1074 1075 PetscFunctionBegin; 1076 ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr); 1077 ierr = PetscTryMethod(mat_ctx->pc,"PCBDDCMatFETIDPGetRHS_C",(Mat,Vec,Vec),(fetidp_mat,standard_rhs,fetidp_flux_rhs));CHKERRQ(ierr); 1078 PetscFunctionReturn(0); 1079 } 1080 /* -------------------------------------------------------------------------- */ 1081 1082 #undef __FUNCT__ 1083 #define __FUNCT__ "PCBDDCMatFETIDPGetSolution_BDDC" 1084 static PetscErrorCode PCBDDCMatFETIDPGetSolution_BDDC(Mat fetidp_mat, Vec fetidp_flux_sol, Vec standard_sol) 1085 { 1086 FETIDPMat_ctx mat_ctx; 1087 PC_IS* pcis; 1088 PC_BDDC* pcbddc; 1089 PetscErrorCode ierr; 1090 1091 PetscFunctionBegin; 1092 ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr); 1093 pcis = (PC_IS*)mat_ctx->pc->data; 1094 pcbddc = (PC_BDDC*)mat_ctx->pc->data; 1095 1096 /* apply B_delta^T */ 1097 ierr = VecScatterBegin(mat_ctx->l2g_lambda,fetidp_flux_sol,mat_ctx->lambda_local,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 1098 ierr = VecScatterEnd (mat_ctx->l2g_lambda,fetidp_flux_sol,mat_ctx->lambda_local,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 1099 ierr = MatMultTranspose(mat_ctx->B_delta,mat_ctx->lambda_local,pcis->vec1_B);CHKERRQ(ierr); 1100 /* compute rhs for BDDC application */ 1101 ierr = VecAYPX(pcis->vec1_B,-1.0,mat_ctx->temp_solution_B);CHKERRQ(ierr); 1102 if (pcbddc->switch_static) { 1103 ierr = VecCopy(mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr); 1104 } 1105 /* apply BDDC */ 1106 ierr = PCBDDCApplyInterfacePreconditioner(mat_ctx->pc);CHKERRQ(ierr); 1107 /* put values into standard global vector */ 1108 ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 1109 ierr = VecScatterEnd (pcis->global_to_B,pcis->vec1_B,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 1110 if (!pcbddc->switch_static) { 1111 /* compute values into the interior if solved for the partially subassembled Schur complement */ 1112 ierr = MatMult(pcis->A_IB,pcis->vec1_B,pcis->vec1_D);CHKERRQ(ierr); 1113 ierr = VecAXPY(mat_ctx->temp_solution_D,-1.0,pcis->vec1_D);CHKERRQ(ierr); 1114 ierr = KSPSolve(pcbddc->ksp_D,mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr); 1115 } 1116 ierr = VecScatterBegin(pcis->global_to_D,pcis->vec1_D,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 1117 ierr = VecScatterEnd (pcis->global_to_D,pcis->vec1_D,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 1118 /* final change of basis if needed 1119 Is also sums the dirichlet part removed during RHS assembling */ 1120 ierr = PCPostSolve_BDDC(mat_ctx->pc,NULL,NULL,standard_sol);CHKERRQ(ierr); 1121 PetscFunctionReturn(0); 1122 } 1123 1124 #undef __FUNCT__ 1125 #define __FUNCT__ "PCBDDCMatFETIDPGetSolution" 1126 /*@ 1127 PCBDDCMatFETIDPGetSolution - Compute the physical solution from the solution of the FETIDP linear system 1128 1129 Collective 1130 1131 Input Parameters: 1132 + fetidp_mat - the FETIDP matrix obtained by calling PCBDDCCreateFETIDPOperators 1133 . fetidp_flux_sol - the solution of the FETIDP linear system 1134 1135 Output Parameters: 1136 - standard_sol - the solution defined on the physical domain 1137 1138 Level: developer 1139 1140 Notes: 1141 1142 .seealso: PCBDDC,PCBDDCCreateFETIDPOperators 1143 @*/ 1144 PetscErrorCode PCBDDCMatFETIDPGetSolution(Mat fetidp_mat, Vec fetidp_flux_sol, Vec standard_sol) 1145 { 1146 FETIDPMat_ctx mat_ctx; 1147 PetscErrorCode ierr; 1148 1149 PetscFunctionBegin; 1150 ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr); 1151 ierr = PetscTryMethod(mat_ctx->pc,"PCBDDCMatFETIDPGetSolution_C",(Mat,Vec,Vec),(fetidp_mat,fetidp_flux_sol,standard_sol));CHKERRQ(ierr); 1152 PetscFunctionReturn(0); 1153 } 1154 /* -------------------------------------------------------------------------- */ 1155 1156 extern PetscErrorCode FETIDPMatMult(Mat,Vec,Vec); 1157 extern PetscErrorCode PCBDDCDestroyFETIDPMat(Mat); 1158 extern PetscErrorCode FETIDPPCApply(PC,Vec,Vec); 1159 extern PetscErrorCode PCBDDCDestroyFETIDPPC(PC); 1160 1161 #undef __FUNCT__ 1162 #define __FUNCT__ "PCBDDCCreateFETIDPOperators_BDDC" 1163 static PetscErrorCode PCBDDCCreateFETIDPOperators_BDDC(PC pc, Mat *fetidp_mat, PC *fetidp_pc) 1164 { 1165 1166 FETIDPMat_ctx fetidpmat_ctx; 1167 Mat newmat; 1168 FETIDPPC_ctx fetidppc_ctx; 1169 PC newpc; 1170 MPI_Comm comm; 1171 PetscErrorCode ierr; 1172 1173 PetscFunctionBegin; 1174 ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr); 1175 /* FETIDP linear matrix */ 1176 ierr = PCBDDCCreateFETIDPMatContext(pc,&fetidpmat_ctx);CHKERRQ(ierr); 1177 ierr = PCBDDCSetupFETIDPMatContext(fetidpmat_ctx);CHKERRQ(ierr); 1178 ierr = MatCreateShell(comm,PETSC_DECIDE,PETSC_DECIDE,fetidpmat_ctx->n_lambda,fetidpmat_ctx->n_lambda,fetidpmat_ctx,&newmat);CHKERRQ(ierr); 1179 ierr = MatShellSetOperation(newmat,MATOP_MULT,(void (*)(void))FETIDPMatMult);CHKERRQ(ierr); 1180 ierr = MatShellSetOperation(newmat,MATOP_DESTROY,(void (*)(void))PCBDDCDestroyFETIDPMat);CHKERRQ(ierr); 1181 ierr = MatSetUp(newmat);CHKERRQ(ierr); 1182 /* FETIDP preconditioner */ 1183 ierr = PCBDDCCreateFETIDPPCContext(pc,&fetidppc_ctx);CHKERRQ(ierr); 1184 ierr = PCBDDCSetupFETIDPPCContext(newmat,fetidppc_ctx);CHKERRQ(ierr); 1185 ierr = PCCreate(comm,&newpc);CHKERRQ(ierr); 1186 ierr = PCSetType(newpc,PCSHELL);CHKERRQ(ierr); 1187 ierr = PCShellSetContext(newpc,fetidppc_ctx);CHKERRQ(ierr); 1188 ierr = PCShellSetApply(newpc,FETIDPPCApply);CHKERRQ(ierr); 1189 ierr = PCShellSetDestroy(newpc,PCBDDCDestroyFETIDPPC);CHKERRQ(ierr); 1190 ierr = PCSetOperators(newpc,newmat,newmat,SAME_PRECONDITIONER);CHKERRQ(ierr); 1191 ierr = PCSetUp(newpc);CHKERRQ(ierr); 1192 /* return pointers for objects created */ 1193 *fetidp_mat=newmat; 1194 *fetidp_pc=newpc; 1195 PetscFunctionReturn(0); 1196 } 1197 1198 #undef __FUNCT__ 1199 #define __FUNCT__ "PCBDDCCreateFETIDPOperators" 1200 /*@ 1201 PCBDDCCreateFETIDPOperators - Create operators for FETIDP 1202 1203 Collective 1204 1205 Input Parameters: 1206 + pc - the BDDC preconditioning context already setup 1207 1208 Output Parameters: 1209 . fetidp_mat - shell FETIDP matrix object 1210 . fetidp_pc - shell Dirichlet preconditioner for FETIDP matrix 1211 1212 Options Database Keys: 1213 - -fetidp_fullyredundant: use or not a fully redundant set of Lagrange multipliers 1214 1215 Level: developer 1216 1217 Notes: 1218 Currently the only operation provided for FETIDP matrix is MatMult 1219 1220 .seealso: PCBDDC 1221 @*/ 1222 PetscErrorCode PCBDDCCreateFETIDPOperators(PC pc, Mat *fetidp_mat, PC *fetidp_pc) 1223 { 1224 PetscErrorCode ierr; 1225 1226 PetscFunctionBegin; 1227 PetscValidHeaderSpecific(pc,PC_CLASSID,1); 1228 if (pc->setupcalled) { 1229 ierr = PetscUseMethod(pc,"PCBDDCCreateFETIDPOperators_C",(PC,Mat*,PC*),(pc,fetidp_mat,fetidp_pc));CHKERRQ(ierr); 1230 } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"You must call PCSetup_BDDC() first \n"); 1231 PetscFunctionReturn(0); 1232 } 1233 /* -------------------------------------------------------------------------- */ 1234 /*MC 1235 PCBDDC - Balancing Domain Decomposition by Constraints. 1236 1237 An implementation of the BDDC preconditioner based on 1238 1239 .vb 1240 [1] C. R. Dohrmann. "An approximate BDDC preconditioner", Numerical Linear Algebra with Applications Volume 14, Issue 2, pages 149-168, March 2007 1241 [2] A. Klawonn and O. B. Widlund. "Dual-Primal FETI Methods for Linear Elasticity", http://cs.nyu.edu/csweb/Research/TechReports/TR2004-855/TR2004-855.pdf 1242 [3] J. Mandel, B. Sousedik, C. R. Dohrmann. "Multispace and Multilevel BDDC", http://arxiv.org/abs/0712.3977 1243 .ve 1244 1245 The matrix to be preconditioned (Pmat) must be of type MATIS. 1246 1247 Currently works with MATIS matrices with local Neumann matrices of type MATSEQAIJ, MATSEQBAIJ or MATSEQSBAIJ, either with real or complex numbers. 1248 1249 It also works with unsymmetric and indefinite problems. 1250 1251 Unlike 'conventional' interface preconditioners, PCBDDC iterates over all degrees of freedom, not just those on the interface. This allows the use of approximate solvers on the subdomains. 1252 1253 Approximate local solvers are automatically adapted for singular linear problems (see [1]) if the user has provided the nullspace using PCBDDCSetNullSpace 1254 1255 Boundary nodes are split in vertices, edges and faces using information from the local to global mapping of dofs and the local connectivity graph of nodes. The latter can be customized by using PCBDDCSetLocalAdjacencyGraph 1256 1257 Constraints can be customized by attaching a MatNullSpace object to the MATIS matrix via MatSetNearNullSpace. 1258 1259 Change of basis is performed similarly to [2] when requested. When more the one constraint is present on a single connected component (i.e. an edge or a face), a robust method based on local QR factorizations is used. 1260 1261 The PETSc implementation also supports multilevel BDDC [3]. Coarse grids are partitioned using MatPartitioning object. 1262 1263 Options Database Keys: 1264 1265 . -pc_bddc_use_vertices <1> - use or not vertices in primal space 1266 . -pc_bddc_use_edges <1> - use or not edges in primal space 1267 . -pc_bddc_use_faces <0> - use or not faces in primal space 1268 . -pc_bddc_use_change_of_basis <0> - use change of basis approach (on edges only) 1269 . -pc_bddc_use_change_on_faces <0> - use change of basis approach on faces if change of basis has been requested 1270 . -pc_bddc_switch_static <0> - switches from M_2 to M_3 operator (see reference article [1]) 1271 . -pc_bddc_levels <0> - maximum number of levels for multilevel 1272 . -pc_bddc_coarsening_ratio - H/h ratio at the coarser level 1273 - -pc_bddc_check_level <0> - set verbosity level of debugging output 1274 1275 Options for Dirichlet, Neumann or coarse solver can be set with 1276 .vb 1277 -pc_bddc_dirichlet_ 1278 -pc_bddc_neumann_ 1279 -pc_bddc_coarse_ 1280 .ve 1281 e.g -pc_bddc_dirichlet_ksp_type richardson -pc_bddc_dirichlet_pc_type gamg 1282 1283 When using a multilevel approach, solvers' options at the N-th level can be specified as 1284 .vb 1285 -pc_bddc_dirichlet_N_ 1286 -pc_bddc_neumann_N_ 1287 -pc_bddc_coarse_N_ 1288 .ve 1289 Note that level number ranges from the finest 0 to the coarsest N 1290 1291 Level: intermediate 1292 1293 Developer notes: 1294 Currently does not work with KSPBCGS and other KSPs requiring the specialization of PCApplyTranspose 1295 1296 New deluxe scaling operator will be available soon. 1297 1298 Contributed by Stefano Zampini 1299 1300 .seealso: PCCreate(), PCSetType(), PCType (for list of available types), PC, MATIS 1301 M*/ 1302 1303 #undef __FUNCT__ 1304 #define __FUNCT__ "PCCreate_BDDC" 1305 PETSC_EXTERN PetscErrorCode PCCreate_BDDC(PC pc) 1306 { 1307 PetscErrorCode ierr; 1308 PC_BDDC *pcbddc; 1309 1310 PetscFunctionBegin; 1311 /* Creates the private data structure for this preconditioner and attach it to the PC object. */ 1312 ierr = PetscNewLog(pc,PC_BDDC,&pcbddc);CHKERRQ(ierr); 1313 pc->data = (void*)pcbddc; 1314 1315 /* create PCIS data structure */ 1316 ierr = PCISCreate(pc);CHKERRQ(ierr); 1317 1318 /* BDDC customization */ 1319 pcbddc->use_vertices = PETSC_TRUE; 1320 pcbddc->use_edges = PETSC_TRUE; 1321 pcbddc->use_faces = PETSC_FALSE; 1322 pcbddc->use_change_of_basis = PETSC_FALSE; 1323 pcbddc->use_change_on_faces = PETSC_FALSE; 1324 pcbddc->switch_static = PETSC_FALSE; 1325 pcbddc->use_nnsp_true = PETSC_FALSE; /* not yet exposed */ 1326 pcbddc->dbg_flag = 0; 1327 1328 pcbddc->user_primal_vertices = 0; 1329 pcbddc->NullSpace = 0; 1330 pcbddc->temp_solution = 0; 1331 pcbddc->original_rhs = 0; 1332 pcbddc->local_mat = 0; 1333 pcbddc->ChangeOfBasisMatrix = 0; 1334 pcbddc->coarse_vec = 0; 1335 pcbddc->coarse_rhs = 0; 1336 pcbddc->coarse_ksp = 0; 1337 pcbddc->coarse_phi_B = 0; 1338 pcbddc->coarse_phi_D = 0; 1339 pcbddc->coarse_psi_B = 0; 1340 pcbddc->coarse_psi_D = 0; 1341 pcbddc->vec1_P = 0; 1342 pcbddc->vec1_R = 0; 1343 pcbddc->vec2_R = 0; 1344 pcbddc->local_auxmat1 = 0; 1345 pcbddc->local_auxmat2 = 0; 1346 pcbddc->R_to_B = 0; 1347 pcbddc->R_to_D = 0; 1348 pcbddc->ksp_D = 0; 1349 pcbddc->ksp_R = 0; 1350 pcbddc->NeumannBoundaries = 0; 1351 pcbddc->user_provided_isfordofs = PETSC_FALSE; 1352 pcbddc->n_ISForDofs = 0; 1353 pcbddc->ISForDofs = 0; 1354 pcbddc->ConstraintMatrix = 0; 1355 pcbddc->use_exact_dirichlet_trick = PETSC_TRUE; 1356 pcbddc->coarse_loc_to_glob = 0; 1357 pcbddc->coarsening_ratio = 8; 1358 pcbddc->current_level = 0; 1359 pcbddc->max_levels = 0; 1360 1361 /* create local graph structure */ 1362 ierr = PCBDDCGraphCreate(&pcbddc->mat_graph);CHKERRQ(ierr); 1363 1364 /* scaling */ 1365 pcbddc->use_deluxe_scaling = PETSC_FALSE; 1366 pcbddc->work_scaling = 0; 1367 1368 /* function pointers */ 1369 pc->ops->apply = PCApply_BDDC; 1370 pc->ops->applytranspose = 0; 1371 pc->ops->setup = PCSetUp_BDDC; 1372 pc->ops->destroy = PCDestroy_BDDC; 1373 pc->ops->setfromoptions = PCSetFromOptions_BDDC; 1374 pc->ops->view = 0; 1375 pc->ops->applyrichardson = 0; 1376 pc->ops->applysymmetricleft = 0; 1377 pc->ops->applysymmetricright = 0; 1378 pc->ops->presolve = PCPreSolve_BDDC; 1379 pc->ops->postsolve = PCPostSolve_BDDC; 1380 1381 /* composing function */ 1382 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetPrimalVerticesLocalIS_C",PCBDDCSetPrimalVerticesLocalIS_BDDC);CHKERRQ(ierr); 1383 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetCoarseningRatio_C",PCBDDCSetCoarseningRatio_BDDC);CHKERRQ(ierr); 1384 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevel_C",PCBDDCSetLevel_BDDC);CHKERRQ(ierr); 1385 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetUseExactDirichlet_C",PCBDDCSetUseExactDirichlet_BDDC);CHKERRQ(ierr); 1386 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevels_C",PCBDDCSetLevels_BDDC);CHKERRQ(ierr); 1387 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNullSpace_C",PCBDDCSetNullSpace_BDDC);CHKERRQ(ierr); 1388 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundaries_C",PCBDDCSetDirichletBoundaries_BDDC);CHKERRQ(ierr); 1389 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundaries_C",PCBDDCSetNeumannBoundaries_BDDC);CHKERRQ(ierr); 1390 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundaries_C",PCBDDCGetDirichletBoundaries_BDDC);CHKERRQ(ierr); 1391 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundaries_C",PCBDDCGetNeumannBoundaries_BDDC);CHKERRQ(ierr); 1392 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplitting_C",PCBDDCSetDofsSplitting_BDDC);CHKERRQ(ierr); 1393 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",PCBDDCSetLocalAdjacencyGraph_BDDC);CHKERRQ(ierr); 1394 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCCreateFETIDPOperators_C",PCBDDCCreateFETIDPOperators_BDDC);CHKERRQ(ierr); 1395 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetRHS_C",PCBDDCMatFETIDPGetRHS_BDDC);CHKERRQ(ierr); 1396 ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetSolution_C",PCBDDCMatFETIDPGetSolution_BDDC);CHKERRQ(ierr); 1397 PetscFunctionReturn(0); 1398 } 1399 1400