1 #include <petsc/private/pcbjkokkosimpl.h> 2 3 #include <petsc/private/kspimpl.h> 4 #include <petscksp.h> /*I "petscksp.h" I*/ 5 #include <../src/mat/impls/aij/mpi/mpiaij.h> 6 #include <../src/mat/impls/aij/seq/kokkos/aijkok.hpp> 7 #include <petscsection.h> 8 #include <petscdmcomposite.h> 9 10 #include <../src/mat/impls/aij/seq/aij.h> 11 #include <../src/mat/impls/aij/seq/kokkos/aijkok.hpp> 12 13 #include <petscdevice_cupm.h> 14 15 static PetscErrorCode PCBJKOKKOSCreateKSP_BJKOKKOS(PC pc) 16 { 17 const char *prefix; 18 PC_PCBJKOKKOS *jac = (PC_PCBJKOKKOS *)pc->data; 19 DM dm; 20 21 PetscFunctionBegin; 22 PetscCall(KSPCreate(PetscObjectComm((PetscObject)pc), &jac->ksp)); 23 PetscCall(KSPSetNestLevel(jac->ksp, pc->kspnestlevel)); 24 PetscCall(KSPSetErrorIfNotConverged(jac->ksp, pc->erroriffailure)); 25 PetscCall(PetscObjectIncrementTabLevel((PetscObject)jac->ksp, (PetscObject)pc, 1)); 26 PetscCall(PCGetOptionsPrefix(pc, &prefix)); 27 PetscCall(KSPSetOptionsPrefix(jac->ksp, prefix)); 28 PetscCall(KSPAppendOptionsPrefix(jac->ksp, "pc_bjkokkos_")); 29 PetscCall(PCGetDM(pc, &dm)); 30 if (dm) { 31 PetscCall(KSPSetDM(jac->ksp, dm)); 32 PetscCall(KSPSetDMActive(jac->ksp, PETSC_FALSE)); 33 } 34 jac->reason = PETSC_FALSE; 35 jac->monitor = PETSC_FALSE; 36 jac->batch_target = 0; 37 jac->rank_target = 0; 38 jac->nsolves_team = 1; 39 jac->ksp->max_it = 50; // this is really for GMRES w/o restarts 40 PetscFunctionReturn(PETSC_SUCCESS); 41 } 42 43 // y <-- Ax 44 KOKKOS_INLINE_FUNCTION PetscErrorCode MatMult(const team_member team, const PetscInt *glb_Aai, const PetscInt *glb_Aaj, const PetscScalar *glb_Aaa, const PetscInt *r, const PetscInt *ic, const PetscInt start, const PetscInt end, const PetscScalar *x_loc, PetscScalar *y_loc) 45 { 46 Kokkos::parallel_for(Kokkos::TeamThreadRange(team, start, end), [=](const int rowb) { 47 int rowa = ic[rowb]; 48 int n = glb_Aai[rowa + 1] - glb_Aai[rowa]; 49 const PetscInt *aj = glb_Aaj + glb_Aai[rowa]; // global 50 const PetscScalar *aa = glb_Aaa + glb_Aai[rowa]; 51 PetscScalar sum; 52 Kokkos::parallel_reduce(Kokkos::ThreadVectorRange(team, n), [=](const int i, PetscScalar &lsum) { lsum += aa[i] * x_loc[r[aj[i]] - start]; }, sum); 53 Kokkos::single(Kokkos::PerThread(team), [=]() { y_loc[rowb - start] = sum; }); 54 }); 55 team.team_barrier(); 56 return PETSC_SUCCESS; 57 } 58 59 // temp buffer per thread with reduction at end? 60 KOKKOS_INLINE_FUNCTION PetscErrorCode MatMultTranspose(const team_member team, const PetscInt *glb_Aai, const PetscInt *glb_Aaj, const PetscScalar *glb_Aaa, const PetscInt *r, const PetscInt *ic, const PetscInt start, const PetscInt end, const PetscScalar *x_loc, PetscScalar *y_loc) 61 { 62 Kokkos::parallel_for(Kokkos::TeamVectorRange(team, end - start), [=](int i) { y_loc[i] = 0; }); 63 team.team_barrier(); 64 Kokkos::parallel_for(Kokkos::TeamThreadRange(team, start, end), [=](const int rowb) { 65 int rowa = ic[rowb]; 66 int n = glb_Aai[rowa + 1] - glb_Aai[rowa]; 67 const PetscInt *aj = glb_Aaj + glb_Aai[rowa]; // global 68 const PetscScalar *aa = glb_Aaa + glb_Aai[rowa]; 69 const PetscScalar xx = x_loc[rowb - start]; // rowb = ic[rowa] = ic[r[rowb]] 70 Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, n), [=](const int &i) { 71 PetscScalar val = aa[i] * xx; 72 Kokkos::atomic_fetch_add(&y_loc[r[aj[i]] - start], val); 73 }); 74 }); 75 team.team_barrier(); 76 return PETSC_SUCCESS; 77 } 78 79 typedef struct Batch_MetaData_TAG { 80 PetscInt flops; 81 PetscInt its; 82 KSPConvergedReason reason; 83 } Batch_MetaData; 84 85 // Solve A(BB^-1)x = y with TFQMR. Right preconditioned to get un-preconditioned residual 86 static KOKKOS_INLINE_FUNCTION PetscErrorCode BJSolve_TFQMR(const team_member team, const PetscInt *glb_Aai, const PetscInt *glb_Aaj, const PetscScalar *glb_Aaa, const PetscInt *r, const PetscInt *ic, PetscScalar *work_space_global, const int stride_global, const int nShareVec, PetscScalar *work_space_shared, const int stride_shared, PetscReal rtol, PetscReal atol, PetscReal dtol, PetscInt maxit, Batch_MetaData *metad, const PetscInt start, const PetscInt end, const PetscScalar glb_idiag[], const PetscScalar *glb_b, PetscScalar *glb_x, bool monitor) 87 { 88 using Kokkos::parallel_for; 89 using Kokkos::parallel_reduce; 90 int Nblk = end - start, it, m, stride = stride_shared, idx = 0; 91 PetscReal dp, dpold, w, dpest, tau, psi, cm, r0; 92 const PetscScalar *Diag = &glb_idiag[start]; 93 PetscScalar *ptr = work_space_shared, rho, rhoold, a, s, b, eta, etaold, psiold, cf, dpi; 94 95 if (idx++ == nShareVec) { 96 ptr = work_space_global; 97 stride = stride_global; 98 } 99 PetscScalar *XX = ptr; 100 ptr += stride; 101 if (idx++ == nShareVec) { 102 ptr = work_space_global; 103 stride = stride_global; 104 } 105 PetscScalar *R = ptr; 106 ptr += stride; 107 if (idx++ == nShareVec) { 108 ptr = work_space_global; 109 stride = stride_global; 110 } 111 PetscScalar *RP = ptr; 112 ptr += stride; 113 if (idx++ == nShareVec) { 114 ptr = work_space_global; 115 stride = stride_global; 116 } 117 PetscScalar *V = ptr; 118 ptr += stride; 119 if (idx++ == nShareVec) { 120 ptr = work_space_global; 121 stride = stride_global; 122 } 123 PetscScalar *T = ptr; 124 ptr += stride; 125 if (idx++ == nShareVec) { 126 ptr = work_space_global; 127 stride = stride_global; 128 } 129 PetscScalar *Q = ptr; 130 ptr += stride; 131 if (idx++ == nShareVec) { 132 ptr = work_space_global; 133 stride = stride_global; 134 } 135 PetscScalar *P = ptr; 136 ptr += stride; 137 if (idx++ == nShareVec) { 138 ptr = work_space_global; 139 stride = stride_global; 140 } 141 PetscScalar *U = ptr; 142 ptr += stride; 143 if (idx++ == nShareVec) { 144 ptr = work_space_global; 145 stride = stride_global; 146 } 147 PetscScalar *D = ptr; 148 ptr += stride; 149 if (idx++ == nShareVec) { 150 ptr = work_space_global; 151 stride = stride_global; 152 } 153 PetscScalar *AUQ = V; 154 155 // init: get b, zero x 156 parallel_for(Kokkos::TeamVectorRange(team, start, end), [=](int rowb) { 157 int rowa = ic[rowb]; 158 R[rowb - start] = glb_b[rowa]; 159 XX[rowb - start] = 0; 160 }); 161 team.team_barrier(); 162 parallel_reduce(Kokkos::TeamVectorRange(team, Nblk), [=](const int idx, PetscScalar &lsum) { lsum += R[idx] * PetscConj(R[idx]); }, dpi); 163 team.team_barrier(); 164 r0 = dp = PetscSqrtReal(PetscRealPart(dpi)); 165 // diagnostics 166 #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL) 167 if (monitor) Kokkos::single(Kokkos::PerTeam(team), [=]() { printf("%3d KSP Residual norm %14.12e\n", 0, (double)dp); }); 168 #endif 169 if (dp < atol) { 170 metad->reason = KSP_CONVERGED_ATOL_NORMAL; 171 it = 0; 172 goto done; 173 } 174 if (0 == maxit) { 175 metad->reason = KSP_CONVERGED_ITS; 176 it = 0; 177 goto done; 178 } 179 180 /* Make the initial Rp = R */ 181 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { RP[idx] = R[idx]; }); 182 team.team_barrier(); 183 /* Set the initial conditions */ 184 etaold = 0.0; 185 psiold = 0.0; 186 tau = dp; 187 dpold = dp; 188 189 /* rhoold = (r,rp) */ 190 parallel_reduce(Kokkos::TeamVectorRange(team, Nblk), [=](const int idx, PetscScalar &dot) { dot += R[idx] * PetscConj(RP[idx]); }, rhoold); 191 team.team_barrier(); 192 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { 193 U[idx] = R[idx]; 194 P[idx] = R[idx]; 195 T[idx] = Diag[idx] * P[idx]; 196 D[idx] = 0; 197 }); 198 team.team_barrier(); 199 static_cast<void>(MatMult(team, glb_Aai, glb_Aaj, glb_Aaa, r, ic, start, end, T, V)); 200 201 it = 0; 202 do { 203 /* s <- (v,rp) */ 204 parallel_reduce(Kokkos::TeamVectorRange(team, Nblk), [=](const int idx, PetscScalar &dot) { dot += V[idx] * PetscConj(RP[idx]); }, s); 205 team.team_barrier(); 206 if (s == 0) { 207 metad->reason = KSP_CONVERGED_HAPPY_BREAKDOWN; 208 goto done; 209 } 210 a = rhoold / s; /* a <- rho / s */ 211 /* q <- u - a v VecWAXPY(w,alpha,x,y): w = alpha x + y. */ 212 /* t <- u + q */ 213 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { 214 Q[idx] = U[idx] - a * V[idx]; 215 T[idx] = U[idx] + Q[idx]; 216 }); 217 team.team_barrier(); 218 // KSP_PCApplyBAorAB 219 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { T[idx] = Diag[idx] * T[idx]; }); 220 team.team_barrier(); 221 static_cast<void>(MatMult(team, glb_Aai, glb_Aaj, glb_Aaa, r, ic, start, end, T, AUQ)); 222 /* r <- r - a K (u + q) */ 223 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { R[idx] = R[idx] - a * AUQ[idx]; }); 224 team.team_barrier(); 225 parallel_reduce(Kokkos::TeamVectorRange(team, Nblk), [=](const int idx, PetscScalar &lsum) { lsum += R[idx] * PetscConj(R[idx]); }, dpi); 226 team.team_barrier(); 227 dp = PetscSqrtReal(PetscRealPart(dpi)); 228 for (m = 0; m < 2; m++) { 229 if (!m) w = PetscSqrtReal(dp * dpold); 230 else w = dp; 231 psi = w / tau; 232 cm = 1.0 / PetscSqrtReal(1.0 + psi * psi); 233 tau = tau * psi * cm; 234 eta = cm * cm * a; 235 cf = psiold * psiold * etaold / a; 236 if (!m) { 237 /* D = U + cf D */ 238 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { D[idx] = U[idx] + cf * D[idx]; }); 239 } else { 240 /* D = Q + cf D */ 241 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { D[idx] = Q[idx] + cf * D[idx]; }); 242 } 243 team.team_barrier(); 244 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { XX[idx] = XX[idx] + eta * D[idx]; }); 245 team.team_barrier(); 246 dpest = PetscSqrtReal(2 * it + m + 2.0) * tau; 247 #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL) 248 if (monitor && m == 1) Kokkos::single(Kokkos::PerTeam(team), [=]() { printf("%3d KSP Residual norm %14.12e\n", it + 1, (double)dpest); }); 249 #endif 250 if (dpest < atol) { 251 metad->reason = KSP_CONVERGED_ATOL_NORMAL; 252 goto done; 253 } 254 if (dpest / r0 < rtol) { 255 metad->reason = KSP_CONVERGED_RTOL_NORMAL; 256 goto done; 257 } 258 #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL) 259 if (dpest / r0 > dtol) { 260 metad->reason = KSP_DIVERGED_DTOL; 261 Kokkos::single(Kokkos::PerTeam(team), [=]() { printf("ERROR block %d diverged: %d it, res=%e, r_0=%e\n", team.league_rank(), it, dpest, r0); }); 262 goto done; 263 } 264 #else 265 if (dpest / r0 > dtol) { 266 metad->reason = KSP_DIVERGED_DTOL; 267 goto done; 268 } 269 #endif 270 if (it + 1 == maxit) { 271 metad->reason = KSP_CONVERGED_ITS; 272 #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL) 273 Kokkos::single(Kokkos::PerTeam(team), [=]() { printf("ERROR block %d diverged: TFQMR %d:%d it, res=%e, r_0=%e r_res=%e\n", team.league_rank(), it, m, dpest, r0, dpest / r0); }); 274 #endif 275 goto done; 276 } 277 etaold = eta; 278 psiold = psi; 279 } 280 281 /* rho <- (r,rp) */ 282 parallel_reduce(Kokkos::TeamVectorRange(team, Nblk), [=](const int idx, PetscScalar &dot) { dot += R[idx] * PetscConj(RP[idx]); }, rho); 283 team.team_barrier(); 284 if (rho == 0) { 285 metad->reason = KSP_CONVERGED_HAPPY_BREAKDOWN; 286 goto done; 287 } 288 b = rho / rhoold; /* b <- rho / rhoold */ 289 /* u <- r + b q */ 290 /* p <- u + b(q + b p) */ 291 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { 292 U[idx] = R[idx] + b * Q[idx]; 293 Q[idx] = Q[idx] + b * P[idx]; 294 P[idx] = U[idx] + b * Q[idx]; 295 }); 296 /* v <- K p */ 297 team.team_barrier(); 298 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { T[idx] = Diag[idx] * P[idx]; }); 299 team.team_barrier(); 300 static_cast<void>(MatMult(team, glb_Aai, glb_Aaj, glb_Aaa, r, ic, start, end, T, V)); 301 302 rhoold = rho; 303 dpold = dp; 304 305 it++; 306 } while (it < maxit); 307 done: 308 // KSPUnwindPreconditioner 309 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { XX[idx] = Diag[idx] * XX[idx]; }); 310 team.team_barrier(); 311 // put x into Plex order 312 parallel_for(Kokkos::TeamVectorRange(team, start, end), [=](int rowb) { 313 int rowa = ic[rowb]; 314 glb_x[rowa] = XX[rowb - start]; 315 }); 316 metad->its = it; 317 if (1) { 318 int nnz; 319 parallel_reduce(Kokkos::TeamVectorRange(team, start, end), [=](const int idx, int &lsum) { lsum += (glb_Aai[idx + 1] - glb_Aai[idx]); }, nnz); 320 metad->flops = 2 * (metad->its * (10 * Nblk + 2 * nnz) + 5 * Nblk); 321 } else { 322 metad->flops = 2 * (metad->its * (10 * Nblk + 2 * 50 * Nblk) + 5 * Nblk); // guess 323 } 324 return PETSC_SUCCESS; 325 } 326 327 // Solve Ax = y with biCG 328 static KOKKOS_INLINE_FUNCTION PetscErrorCode BJSolve_BICG(const team_member team, const PetscInt *glb_Aai, const PetscInt *glb_Aaj, const PetscScalar *glb_Aaa, const PetscInt *r, const PetscInt *ic, PetscScalar *work_space_global, const int stride_global, const int nShareVec, PetscScalar *work_space_shared, const int stride_shared, PetscReal rtol, PetscReal atol, PetscReal dtol, PetscInt maxit, Batch_MetaData *metad, const PetscInt start, const PetscInt end, const PetscScalar glb_idiag[], const PetscScalar *glb_b, PetscScalar *glb_x, bool monitor) 329 { 330 using Kokkos::parallel_for; 331 using Kokkos::parallel_reduce; 332 int Nblk = end - start, it, stride = stride_shared, idx = 0; // start in shared mem 333 PetscReal dp, r0; 334 const PetscScalar *Di = &glb_idiag[start]; 335 PetscScalar *ptr = work_space_shared, dpi, a = 1.0, beta, betaold = 1.0, t1, t2; 336 337 if (idx++ == nShareVec) { 338 ptr = work_space_global; 339 stride = stride_global; 340 } 341 PetscScalar *XX = ptr; 342 ptr += stride; 343 if (idx++ == nShareVec) { 344 ptr = work_space_global; 345 stride = stride_global; 346 } 347 PetscScalar *Rl = ptr; 348 ptr += stride; 349 if (idx++ == nShareVec) { 350 ptr = work_space_global; 351 stride = stride_global; 352 } 353 PetscScalar *Zl = ptr; 354 ptr += stride; 355 if (idx++ == nShareVec) { 356 ptr = work_space_global; 357 stride = stride_global; 358 } 359 PetscScalar *Pl = ptr; 360 ptr += stride; 361 if (idx++ == nShareVec) { 362 ptr = work_space_global; 363 stride = stride_global; 364 } 365 PetscScalar *Rr = ptr; 366 ptr += stride; 367 if (idx++ == nShareVec) { 368 ptr = work_space_global; 369 stride = stride_global; 370 } 371 PetscScalar *Zr = ptr; 372 ptr += stride; 373 if (idx++ == nShareVec) { 374 ptr = work_space_global; 375 stride = stride_global; 376 } 377 PetscScalar *Pr = ptr; 378 ptr += stride; 379 380 /* r <- b (x is 0) */ 381 parallel_for(Kokkos::TeamVectorRange(team, start, end), [=](int rowb) { 382 int rowa = ic[rowb]; 383 Rl[rowb - start] = Rr[rowb - start] = glb_b[rowa]; 384 XX[rowb - start] = 0; 385 }); 386 team.team_barrier(); 387 /* z <- Br */ 388 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { 389 Zr[idx] = Di[idx] * Rr[idx]; 390 Zl[idx] = Di[idx] * Rl[idx]; 391 }); 392 team.team_barrier(); 393 /* dp <- r'*r */ 394 parallel_reduce(Kokkos::TeamVectorRange(team, Nblk), [=](const int idx, PetscScalar &lsum) { lsum += Rr[idx] * PetscConj(Rr[idx]); }, dpi); 395 team.team_barrier(); 396 r0 = dp = PetscSqrtReal(PetscRealPart(dpi)); 397 #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL) 398 if (monitor) Kokkos::single(Kokkos::PerTeam(team), [=]() { printf("%3d KSP Residual norm %14.12e\n", 0, (double)dp); }); 399 #endif 400 if (dp < atol) { 401 metad->reason = KSP_CONVERGED_ATOL_NORMAL; 402 it = 0; 403 goto done; 404 } 405 if (0 == maxit) { 406 metad->reason = KSP_CONVERGED_ITS; 407 it = 0; 408 goto done; 409 } 410 411 it = 0; 412 do { 413 /* beta <- r'z */ 414 parallel_reduce(Kokkos::TeamVectorRange(team, Nblk), [=](const int idx, PetscScalar &dot) { dot += Zr[idx] * PetscConj(Rl[idx]); }, beta); 415 team.team_barrier(); 416 #if PCBJKOKKOS_VERBOSE_LEVEL >= 6 417 #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL) 418 Kokkos::single(Kokkos::PerTeam(team), [=]() { printf("%7d beta = Z.R = %22.14e \n", i, (double)beta); }); 419 #endif 420 #endif 421 if (beta == 0.0) { 422 metad->reason = KSP_CONVERGED_HAPPY_BREAKDOWN; 423 goto done; 424 } 425 if (it == 0) { 426 /* p <- z */ 427 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { 428 Pr[idx] = Zr[idx]; 429 Pl[idx] = Zl[idx]; 430 }); 431 } else { 432 t1 = beta / betaold; 433 /* p <- z + b* p */ 434 t2 = PetscConj(t1); 435 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { 436 Pr[idx] = t1 * Pr[idx] + Zr[idx]; 437 Pl[idx] = t2 * Pl[idx] + Zl[idx]; 438 }); 439 } 440 team.team_barrier(); 441 betaold = beta; 442 /* z <- Kp */ 443 static_cast<void>(MatMult(team, glb_Aai, glb_Aaj, glb_Aaa, r, ic, start, end, Pr, Zr)); 444 static_cast<void>(MatMultTranspose(team, glb_Aai, glb_Aaj, glb_Aaa, r, ic, start, end, Pl, Zl)); 445 /* dpi <- z'p */ 446 parallel_reduce(Kokkos::TeamVectorRange(team, Nblk), [=](const int idx, PetscScalar &lsum) { lsum += Zr[idx] * PetscConj(Pl[idx]); }, dpi); 447 team.team_barrier(); 448 if (dpi == 0) { 449 metad->reason = KSP_CONVERGED_HAPPY_BREAKDOWN; 450 goto done; 451 } 452 // 453 a = beta / dpi; /* a = beta/p'z */ 454 t1 = -a; 455 t2 = PetscConj(t1); 456 /* x <- x + ap */ 457 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { 458 XX[idx] = XX[idx] + a * Pr[idx]; 459 Rr[idx] = Rr[idx] + t1 * Zr[idx]; 460 Rl[idx] = Rl[idx] + t2 * Zl[idx]; 461 }); 462 team.team_barrier(); 463 team.team_barrier(); 464 /* dp <- r'*r */ 465 parallel_reduce(Kokkos::TeamVectorRange(team, Nblk), [=](const int idx, PetscScalar &lsum) { lsum += Rr[idx] * PetscConj(Rr[idx]); }, dpi); 466 team.team_barrier(); 467 dp = PetscSqrtReal(PetscRealPart(dpi)); 468 #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL) 469 if (monitor) Kokkos::single(Kokkos::PerTeam(team), [=]() { printf("%3d KSP Residual norm %14.12e\n", it + 1, (double)dp); }); 470 #endif 471 if (dp < atol) { 472 metad->reason = KSP_CONVERGED_ATOL_NORMAL; 473 goto done; 474 } 475 if (dp / r0 < rtol) { 476 metad->reason = KSP_CONVERGED_RTOL_NORMAL; 477 goto done; 478 } 479 #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL) 480 if (dp / r0 > dtol) { 481 metad->reason = KSP_DIVERGED_DTOL; 482 Kokkos::single(Kokkos::PerTeam(team), [=]() { printf("ERROR block %d diverged: %d it, res=%e, r_0=%e (BICG does this)\n", team.league_rank(), it, dp, r0); }); 483 goto done; 484 } 485 #else 486 if (dp / r0 > dtol) { 487 metad->reason = KSP_DIVERGED_DTOL; 488 goto done; 489 } 490 #endif 491 if (it + 1 == maxit) { 492 metad->reason = KSP_CONVERGED_ITS; // don't worry about hitting max iterations 493 #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL) 494 Kokkos::single(Kokkos::PerTeam(team), [=]() { printf("ERROR block %d diverged: BICG %d it, res=%e, r_0=%e r_res=%e\n", team.league_rank(), it, dp, r0, dp / r0); }); 495 #endif 496 goto done; 497 } 498 /* z <- Br */ 499 parallel_for(Kokkos::TeamVectorRange(team, Nblk), [=](int idx) { 500 Zr[idx] = Di[idx] * Rr[idx]; 501 Zl[idx] = Di[idx] * Rl[idx]; 502 }); 503 504 it++; 505 } while (it < maxit); 506 done: 507 // put x back into Plex order 508 parallel_for(Kokkos::TeamVectorRange(team, start, end), [=](int rowb) { 509 int rowa = ic[rowb]; 510 glb_x[rowa] = XX[rowb - start]; 511 }); 512 metad->its = it; 513 if (1) { 514 int nnz; 515 parallel_reduce(Kokkos::TeamVectorRange(team, start, end), [=](const int idx, int &lsum) { lsum += (glb_Aai[idx + 1] - glb_Aai[idx]); }, nnz); 516 metad->flops = 2 * (metad->its * (10 * Nblk + 2 * nnz) + 5 * Nblk); 517 } else { 518 metad->flops = 2 * (metad->its * (10 * Nblk + 2 * 50 * Nblk) + 5 * Nblk); // guess 519 } 520 return PETSC_SUCCESS; 521 } 522 523 // KSP solver solve Ax = b; xout is output, bin is input 524 static PetscErrorCode PCApply_BJKOKKOS(PC pc, Vec bin, Vec xout) 525 { 526 PC_PCBJKOKKOS *jac = (PC_PCBJKOKKOS *)pc->data; 527 Mat A = pc->pmat, Aseq = A; 528 PetscMPIInt rank; 529 530 PetscFunctionBegin; 531 PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)A), &rank)); 532 if (!A->spptr) { 533 Aseq = ((Mat_MPIAIJ *)A->data)->A; // MPI 534 } 535 PetscCall(MatSeqAIJKokkosSyncDevice(Aseq)); 536 { 537 PetscInt maxit = jac->ksp->max_it; 538 const PetscInt conc = Kokkos::DefaultExecutionSpace().concurrency(), openmp = !!(conc < 1000), team_size = (openmp == 0 && PCBJKOKKOS_VEC_SIZE != 1) ? PCBJKOKKOS_TEAM_SIZE : 1; 539 const PetscInt nwork = jac->nwork, nBlk = jac->nBlocks; 540 PetscScalar *glb_xdata = NULL, *dummy; 541 PetscReal rtol = jac->ksp->rtol, atol = jac->ksp->abstol, dtol = jac->ksp->divtol; 542 const PetscScalar *glb_idiag = jac->d_idiag_k->data(), *glb_bdata = NULL; 543 const PetscInt *glb_Aai, *glb_Aaj, *d_bid_eqOffset = jac->d_bid_eqOffset_k->data(); 544 const PetscScalar *glb_Aaa; 545 const PetscInt *d_isicol = jac->d_isicol_k->data(), *d_isrow = jac->d_isrow_k->data(); 546 PCFailedReason pcreason; 547 KSPIndex ksp_type_idx = jac->ksp_type_idx; 548 PetscMemType mtype; 549 PetscContainer container; 550 PetscInt batch_sz; // the number of repeated DMs, [DM_e_1, DM_e_2, DM_e_batch_sz, DM_i_1, ...] 551 VecScatter plex_batch = NULL; // not used 552 Vec bvec; // a copy of b for scatter (just alias to bin now) 553 PetscBool monitor = jac->monitor; // captured 554 PetscInt view_bid = jac->batch_target; 555 MatInfo info; 556 557 PetscCall(MatSeqAIJGetCSRAndMemType(Aseq, &glb_Aai, &glb_Aaj, &dummy, &mtype)); 558 jac->max_nits = 0; 559 glb_Aaa = dummy; 560 if (jac->rank_target != rank) view_bid = -1; // turn off all but one process 561 PetscCall(MatGetInfo(A, MAT_LOCAL, &info)); 562 // get field major is to map plex IO to/from block/field major 563 PetscCall(PetscObjectQuery((PetscObject)A, "plex_batch_is", (PetscObject *)&container)); 564 if (container) { 565 PetscCall(VecDuplicate(bin, &bvec)); 566 PetscCall(PetscContainerGetPointer(container, (void **)&plex_batch)); 567 PetscCall(VecScatterBegin(plex_batch, bin, bvec, INSERT_VALUES, SCATTER_FORWARD)); 568 PetscCall(VecScatterEnd(plex_batch, bin, bvec, INSERT_VALUES, SCATTER_FORWARD)); 569 SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_USER, "No plex_batch_is -- require NO field major ordering for now"); 570 } else { 571 bvec = bin; 572 } 573 // get x 574 PetscCall(VecGetArrayAndMemType(xout, &glb_xdata, &mtype)); 575 #if defined(PETSC_HAVE_CUDA) 576 PetscCheck(PetscMemTypeDevice(mtype), PetscObjectComm((PetscObject)pc), PETSC_ERR_ARG_WRONG, "No GPU data for x %d != %d", static_cast<int>(mtype), static_cast<int>(PETSC_MEMTYPE_DEVICE)); 577 #endif 578 PetscCall(VecGetArrayReadAndMemType(bvec, &glb_bdata, &mtype)); 579 #if defined(PETSC_HAVE_CUDA) 580 PetscCheck(PetscMemTypeDevice(mtype), PetscObjectComm((PetscObject)pc), PETSC_ERR_ARG_WRONG, "No GPU data for b"); 581 #endif 582 // get batch size 583 PetscCall(PetscObjectQuery((PetscObject)A, "batch size", (PetscObject *)&container)); 584 if (container) { 585 PetscInt *pNf = NULL; 586 PetscCall(PetscContainerGetPointer(container, (void **)&pNf)); 587 batch_sz = *pNf; // number of times to repeat the DMs 588 } else batch_sz = 1; 589 PetscCheck(nBlk % batch_sz == 0, PetscObjectComm((PetscObject)pc), PETSC_ERR_ARG_WRONG, "batch_sz = %" PetscInt_FMT ", nBlk = %" PetscInt_FMT, batch_sz, nBlk); 590 if (ksp_type_idx == BATCH_KSP_GMRESKK_IDX) { 591 // KK solver - move PETSc data into Kokkos Views, setup solver, solve, move data out of Kokkos, process metadata (convergence tests, etc.) 592 #if defined(PETSC_HAVE_KOKKOS_KERNELS_BATCH) 593 PetscCall(PCApply_BJKOKKOSKERNELS(pc, glb_bdata, glb_xdata, glb_Aai, glb_Aaj, glb_Aaa, team_size, info, batch_sz, &pcreason)); 594 #else 595 PetscCheck(ksp_type_idx != BATCH_KSP_GMRESKK_IDX, PetscObjectComm((PetscObject)pc), PETSC_ERR_ARG_WRONG, "Type: BATCH_KSP_GMRES not supported for complex"); 596 #endif 597 } else { // Kokkos Krylov 598 using scr_mem_t = Kokkos::DefaultExecutionSpace::scratch_memory_space; 599 using vect2D_scr_t = Kokkos::View<PetscScalar **, Kokkos::LayoutLeft, scr_mem_t>; 600 Kokkos::View<Batch_MetaData *, Kokkos::DefaultExecutionSpace> d_metadata("solver meta data", nBlk); 601 int stride_shared, stride_global, global_buff_words; 602 d_bid_eqOffset = jac->d_bid_eqOffset_k->data(); 603 // solve each block independently 604 int scr_bytes_team_shared = 0, nShareVec = 0, nGlobBVec = 0; 605 if (jac->const_block_size) { // use shared memory for work vectors only if constant block size - todo: test efficiency loss 606 size_t maximum_shared_mem_size = 64000; 607 PetscDevice device; 608 PetscCall(PetscDeviceGetDefault_Internal(&device)); 609 PetscCall(PetscDeviceGetAttribute(device, PETSC_DEVICE_ATTR_SIZE_T_SHARED_MEM_PER_BLOCK, &maximum_shared_mem_size)); 610 stride_shared = jac->const_block_size; // captured 611 nShareVec = maximum_shared_mem_size / (jac->const_block_size * sizeof(PetscScalar)); // integer floor, number of vectors that fit in shared 612 if (nShareVec > nwork) nShareVec = nwork; 613 else nGlobBVec = nwork - nShareVec; 614 global_buff_words = jac->n * nGlobBVec; 615 scr_bytes_team_shared = jac->const_block_size * nShareVec * sizeof(PetscScalar); 616 } else { 617 scr_bytes_team_shared = 0; 618 stride_shared = 0; 619 global_buff_words = jac->n * nwork; 620 nGlobBVec = nwork; // not needed == fix 621 } 622 stride_global = jac->n; // captured 623 #if defined(PETSC_HAVE_CUDA) 624 nvtxRangePushA("batch-kokkos-solve"); 625 #endif 626 Kokkos::View<PetscScalar *, Kokkos::DefaultExecutionSpace> d_work_vecs_k("workvectors", global_buff_words); // global work vectors 627 #if PCBJKOKKOS_VERBOSE_LEVEL > 1 628 PetscCall(PetscInfo(pc, "\tn = %d. %d shared bytes/team, %d global mem bytes, rtol=%e, num blocks %d, team_size=%d, %d vector threads, %d shared vectors, %d global vectors\n", (int)jac->n, scr_bytes_team_shared, global_buff_words, rtol, (int)nBlk, (int)team_size, PCBJKOKKOS_VEC_SIZE, nShareVec, nGlobBVec)); 629 #endif 630 PetscScalar *d_work_vecs = d_work_vecs_k.data(); 631 Kokkos::parallel_for( 632 "Solve", Kokkos::TeamPolicy<Kokkos::LaunchBounds<256, 4>>(nBlk, team_size, PCBJKOKKOS_VEC_SIZE).set_scratch_size(PCBJKOKKOS_SHARED_LEVEL, Kokkos::PerTeam(scr_bytes_team_shared)), KOKKOS_LAMBDA(const team_member team) { 633 const int blkID = team.league_rank(), start = d_bid_eqOffset[blkID], end = d_bid_eqOffset[blkID + 1]; 634 vect2D_scr_t work_vecs_shared(team.team_scratch(PCBJKOKKOS_SHARED_LEVEL), end - start, nShareVec); 635 PetscScalar *work_buff_shared = work_vecs_shared.data(); 636 PetscScalar *work_buff_global = &d_work_vecs[start]; // start inc'ed in 637 bool print = monitor && (blkID == view_bid); 638 switch (ksp_type_idx) { 639 case BATCH_KSP_BICG_IDX: 640 static_cast<void>(BJSolve_BICG(team, glb_Aai, glb_Aaj, glb_Aaa, d_isrow, d_isicol, work_buff_global, stride_global, nShareVec, work_buff_shared, stride_shared, rtol, atol, dtol, maxit, &d_metadata[blkID], start, end, glb_idiag, glb_bdata, glb_xdata, print)); 641 break; 642 case BATCH_KSP_TFQMR_IDX: 643 static_cast<void>(BJSolve_TFQMR(team, glb_Aai, glb_Aaj, glb_Aaa, d_isrow, d_isicol, work_buff_global, stride_global, nShareVec, work_buff_shared, stride_shared, rtol, atol, dtol, maxit, &d_metadata[blkID], start, end, glb_idiag, glb_bdata, glb_xdata, print)); 644 break; 645 default: 646 #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL) 647 printf("Unknown KSP type %d\n", ksp_type_idx); 648 #else 649 /* void */; 650 #endif 651 } 652 }); 653 Kokkos::fence(); 654 #if defined(PETSC_HAVE_CUDA) 655 nvtxRangePop(); 656 nvtxRangePushA("Post-solve-metadata"); 657 #endif 658 auto h_metadata = Kokkos::create_mirror(Kokkos::HostSpace::memory_space(), d_metadata); 659 Kokkos::deep_copy(h_metadata, d_metadata); 660 PetscInt count = -1, mbid = 0; 661 int in[2], out[2]; 662 if (jac->reason) { // -pc_bjkokkos_ksp_converged_reason 663 #if PCBJKOKKOS_VERBOSE_LEVEL >= 3 664 #if PCBJKOKKOS_VERBOSE_LEVEL >= 4 665 PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Iterations\n")); 666 #endif 667 // assume species major 668 #if PCBJKOKKOS_VERBOSE_LEVEL < 4 669 if (batch_sz != 1) PetscCall(PetscPrintf(PetscObjectComm((PetscObject)A), "%s: max iterations per species:", ksp_type_idx == BATCH_KSP_BICG_IDX ? "bicg" : "tfqmr")); 670 else PetscCall(PetscPrintf(PetscObjectComm((PetscObject)A), " Linear solve converged due to %s iterations ", ksp_type_idx == BATCH_KSP_BICG_IDX ? "bicg" : "tfqmr")); 671 #endif 672 for (PetscInt dmIdx = 0, head = 0; dmIdx < jac->num_dms; dmIdx += batch_sz) { 673 for (PetscInt f = 0, idx = head; f < jac->dm_Nf[dmIdx]; f++, s++, idx++) { 674 #if PCBJKOKKOS_VERBOSE_LEVEL >= 4 675 PetscCall(PetscPrintf(PetscObjectComm((PetscObject)A), "%2" PetscInt_FMT ":", s)); 676 for (int bid = 0; bid < batch_sz; bid++) PetscCall(PetscPrintf(PetscObjectComm((PetscObject)A), "%3" PetscInt_FMT " ", h_metadata[idx + bid * jac->dm_Nf[dmIdx]].its)); 677 PetscCall(PetscPrintf(PetscObjectComm((PetscObject)A), "\n")); 678 #else 679 for (int bid = 0; bid < batch_sz; bid++) { 680 if (h_metadata[idx + bid * jac->dm_Nf[dmIdx]].its > count) { 681 count = h_metadata[idx + bid * jac->dm_Nf[dmIdx]].its; 682 mbid = bid; 683 } 684 } 685 PetscCall(PetscPrintf(PetscObjectComm((PetscObject)A), "%3" PetscInt_FMT " ", count)); 686 #endif 687 } 688 head += batch_sz * jac->dm_Nf[dmIdx]; 689 } 690 #if PCBJKOKKOS_VERBOSE_LEVEL == 3 691 PetscCall(PetscPrintf(PetscObjectComm((PetscObject)A), "\n")); 692 #endif 693 #endif 694 if (count == -1) { 695 for (int blkID = 0; blkID < nBlk; blkID++) { 696 if (h_metadata[blkID].its > count) { 697 jac->max_nits = count = h_metadata[blkID].its; 698 mbid = blkID; 699 } 700 #if PCBJKOKKOS_VERBOSE_LEVEL > 0 701 if (h_metadata[blkID].reason < 0) { 702 PetscCall(PetscPrintf(PETSC_COMM_SELF, "ERROR reason=%s, its=%" PetscInt_FMT ". species %" PetscInt_FMT ", batch %" PetscInt_FMT "\n", KSPConvergedReasons[h_metadata[blkID].reason], h_metadata[blkID].its, blkID / batch_sz, blkID % batch_sz)); 703 } 704 #endif 705 PetscCall(PetscLogGpuFlops((PetscLogDouble)h_metadata[blkID].flops)); 706 } 707 } 708 in[0] = count; 709 in[1] = rank; 710 PetscCallMPI(MPI_Allreduce(in, out, 1, MPI_2INT, MPI_MAXLOC, PetscObjectComm((PetscObject)A))); 711 if (0 == rank) { 712 if (batch_sz != 1) 713 PetscCall(PetscPrintf(PETSC_COMM_SELF, "[%d] Linear solve converged due to %s iterations %d, batch %" PetscInt_FMT ", species %" PetscInt_FMT " (max)\n", out[1], KSPConvergedReasons[h_metadata[mbid].reason], out[0], mbid % batch_sz, mbid / batch_sz)); 714 else PetscCall(PetscPrintf(PETSC_COMM_SELF, "[%d] Linear solve converged due to %s iterations %d, block %" PetscInt_FMT " (max)\n", out[1], KSPConvergedReasons[h_metadata[mbid].reason], out[0], mbid)); 715 } 716 } 717 for (int blkID = 0; blkID < nBlk; blkID++) { 718 PetscCall(PetscLogGpuFlops((PetscLogDouble)h_metadata[blkID].flops)); 719 #if PCBJKOKKOS_VERBOSE_LEVEL > 0 720 if (h_metadata[blkID].reason < 0) { 721 PetscCall(PetscPrintf(PETSC_COMM_SELF, "ERROR reason=%s, its=%" PetscInt_FMT ". species %" PetscInt_FMT ", batch %" PetscInt_FMT "\n", KSPConvergedReasons[h_metadata[blkID].reason], h_metadata[blkID].its, blkID / batch_sz, blkID % batch_sz)); 722 } 723 #endif 724 } 725 { 726 int errsum; 727 Kokkos::parallel_reduce( 728 nBlk, 729 KOKKOS_LAMBDA(const int idx, int &lsum) { 730 if (d_metadata[idx].reason < 0) ++lsum; 731 }, 732 errsum); 733 pcreason = errsum ? PC_SUBPC_ERROR : PC_NOERROR; 734 if (!errsum && !jac->max_nits) { // set max its to give back to top KSP 735 for (int blkID = 0; blkID < nBlk; blkID++) { 736 if (h_metadata[blkID].its > jac->max_nits) jac->max_nits = h_metadata[blkID].its; 737 } 738 } else if (errsum) { 739 PetscCall(PetscPrintf(PETSC_COMM_SELF, "[%d] ERROR Kokkos batch solver did not converge in all solves\n", (int)rank)); 740 } 741 } 742 #if defined(PETSC_HAVE_CUDA) 743 nvtxRangePop(); 744 #endif 745 } // end of Kokkos (not Kernels) solvers block 746 PetscCall(VecRestoreArrayAndMemType(xout, &glb_xdata)); 747 PetscCall(VecRestoreArrayReadAndMemType(bvec, &glb_bdata)); 748 PetscCall(PCSetFailedReason(pc, pcreason)); 749 // map back to Plex space - not used 750 if (plex_batch) { 751 PetscCall(VecCopy(xout, bvec)); 752 PetscCall(VecScatterBegin(plex_batch, bvec, xout, INSERT_VALUES, SCATTER_REVERSE)); 753 PetscCall(VecScatterEnd(plex_batch, bvec, xout, INSERT_VALUES, SCATTER_REVERSE)); 754 PetscCall(VecDestroy(&bvec)); 755 } 756 } 757 PetscFunctionReturn(PETSC_SUCCESS); 758 } 759 760 static PetscErrorCode PCSetUp_BJKOKKOS(PC pc) 761 { 762 PC_PCBJKOKKOS *jac = (PC_PCBJKOKKOS *)pc->data; 763 Mat A = pc->pmat, Aseq = A; // use filtered block matrix, really "P" 764 PetscBool flg; 765 766 PetscFunctionBegin; 767 //PetscCheck(!pc->useAmat, PetscObjectComm((PetscObject)pc), PETSC_ERR_SUP, "No support for using 'use_amat'"); 768 PetscCheck(A, PetscObjectComm((PetscObject)A), PETSC_ERR_USER, "No matrix - A is used above"); 769 PetscCall(PetscObjectTypeCompareAny((PetscObject)A, &flg, MATSEQAIJKOKKOS, MATMPIAIJKOKKOS, MATAIJKOKKOS, "")); 770 PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONG, "must use '-[dm_]mat_type aijkokkos -[dm_]vec_type kokkos' for -pc_type bjkokkos"); 771 if (!A->spptr) { 772 Aseq = ((Mat_MPIAIJ *)A->data)->A; // MPI 773 } 774 PetscCall(MatSeqAIJKokkosSyncDevice(Aseq)); 775 { 776 PetscInt Istart, Iend; 777 PetscMPIInt rank; 778 PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)A), &rank)); 779 PetscCall(MatGetOwnershipRange(A, &Istart, &Iend)); 780 if (!jac->vec_diag) { 781 Vec *subX = NULL; 782 DM pack, *subDM = NULL; 783 PetscInt nDMs, n, *block_sizes = NULL; 784 IS isrow, isicol; 785 { // Permute the matrix to get a block diagonal system: d_isrow_k, d_isicol_k 786 MatOrderingType rtype; 787 const PetscInt *rowindices, *icolindices; 788 rtype = MATORDERINGRCM; 789 // get permutation. And invert. should we convert to local indices? 790 PetscCall(MatGetOrdering(Aseq, rtype, &isrow, &isicol)); // only seems to work for seq matrix 791 PetscCall(ISDestroy(&isrow)); 792 PetscCall(ISInvertPermutation(isicol, PETSC_DECIDE, &isrow)); // THIS IS BACKWARD -- isrow is inverse 793 // if (rank==1) PetscCall(ISView(isicol, PETSC_VIEWER_STDOUT_SELF)); 794 if (0) { 795 Mat mat_block_order; // debug 796 PetscCall(ISShift(isicol, Istart, isicol)); 797 PetscCall(MatCreateSubMatrix(A, isicol, isicol, MAT_INITIAL_MATRIX, &mat_block_order)); 798 PetscCall(ISShift(isicol, -Istart, isicol)); 799 PetscCall(MatViewFromOptions(mat_block_order, NULL, "-ksp_batch_reorder_view")); 800 PetscCall(MatDestroy(&mat_block_order)); 801 } 802 PetscCall(ISGetIndices(isrow, &rowindices)); // local idx 803 PetscCall(ISGetIndices(isicol, &icolindices)); 804 const Kokkos::View<PetscInt *, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_isrow_k((PetscInt *)rowindices, A->rmap->n); 805 const Kokkos::View<PetscInt *, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_isicol_k((PetscInt *)icolindices, A->rmap->n); 806 jac->d_isrow_k = new Kokkos::View<PetscInt *>(Kokkos::create_mirror(DefaultMemorySpace(), h_isrow_k)); 807 jac->d_isicol_k = new Kokkos::View<PetscInt *>(Kokkos::create_mirror(DefaultMemorySpace(), h_isicol_k)); 808 Kokkos::deep_copy(*jac->d_isrow_k, h_isrow_k); 809 Kokkos::deep_copy(*jac->d_isicol_k, h_isicol_k); 810 PetscCall(ISRestoreIndices(isrow, &rowindices)); 811 PetscCall(ISRestoreIndices(isicol, &icolindices)); 812 // if (rank==1) PetscCall(ISView(isicol, PETSC_VIEWER_STDOUT_SELF)); 813 } 814 // get block sizes & allocate vec_diag 815 PetscCall(PCGetDM(pc, &pack)); 816 if (pack) { 817 PetscCall(PetscObjectTypeCompare((PetscObject)pack, DMCOMPOSITE, &flg)); 818 if (flg) { 819 PetscCall(DMCompositeGetNumberDM(pack, &nDMs)); 820 PetscCall(DMCreateGlobalVector(pack, &jac->vec_diag)); 821 } else pack = NULL; // flag for no DM 822 } 823 if (!jac->vec_diag) { // get 'nDMs' and sizes 'block_sizes' w/o DMComposite. User could provide ISs (todo) 824 PetscInt bsrt, bend, ncols, ntot = 0; 825 const PetscInt *colsA, nloc = Iend - Istart; 826 const PetscInt *rowindices, *icolindices; 827 PetscCall(PetscMalloc1(nloc, &block_sizes)); // very inefficient, to big 828 PetscCall(ISGetIndices(isrow, &rowindices)); 829 PetscCall(ISGetIndices(isicol, &icolindices)); 830 nDMs = 0; 831 bsrt = 0; 832 bend = 1; 833 for (PetscInt row_B = 0; row_B < nloc; row_B++) { // for all rows in block diagonal space 834 PetscInt rowA = icolindices[row_B], minj = PETSC_MAX_INT, maxj = 0; 835 //PetscCall(PetscPrintf(PETSC_COMM_SELF, "\t[%d] rowA = %d\n",rank,rowA)); 836 PetscCall(MatGetRow(Aseq, rowA, &ncols, &colsA, NULL)); // not sorted in permutation 837 PetscCheck(ncols, PetscObjectComm((PetscObject)pc), PETSC_ERR_ARG_WRONG, "Empty row not supported: %" PetscInt_FMT, row_B); 838 for (PetscInt colj = 0; colj < ncols; colj++) { 839 PetscInt colB = rowindices[colsA[colj]]; // use local idx 840 //PetscCall(PetscPrintf(PETSC_COMM_SELF, "\t\t[%d] colB = %d\n",rank,colB)); 841 PetscCheck(colB >= 0 && colB < nloc, PetscObjectComm((PetscObject)pc), PETSC_ERR_ARG_WRONG, "colB < 0: %" PetscInt_FMT, colB); 842 if (colB > maxj) maxj = colB; 843 if (colB < minj) minj = colB; 844 } 845 PetscCall(MatRestoreRow(Aseq, rowA, &ncols, &colsA, NULL)); 846 if (minj >= bend) { // first column is > max of last block -- new block or last block 847 //PetscCall(PetscPrintf(PetscObjectComm((PetscObject)A), "\t\t finish block %d, N loc = %d (%d,%d)\n", nDMs+1, bend - bsrt,bsrt,bend)); 848 block_sizes[nDMs] = bend - bsrt; 849 ntot += block_sizes[nDMs]; 850 PetscCheck(minj == bend, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "minj != bend: %" PetscInt_FMT " != %" PetscInt_FMT, minj, bend); 851 bsrt = bend; 852 bend++; // start with size 1 in new block 853 nDMs++; 854 } 855 if (maxj + 1 > bend) bend = maxj + 1; 856 PetscCheck(minj >= bsrt || row_B == Iend - 1, PetscObjectComm((PetscObject)pc), PETSC_ERR_ARG_WRONG, "%" PetscInt_FMT ") minj < bsrt: %" PetscInt_FMT " != %" PetscInt_FMT, rowA, minj, bsrt); 857 //PetscCall(PetscPrintf(PETSC_COMM_SELF, "[%d] %d) row %d.%d) cols %d : %d ; bsrt = %d, bend = %d\n",rank,row_B,nDMs,rowA,minj,maxj,bsrt,bend)); 858 } 859 // do last block 860 //PetscCall(PetscPrintf(PETSC_COMM_SELF, "\t\t\t [%d] finish block %d, N loc = %d (%d,%d)\n", rank, nDMs+1, bend - bsrt,bsrt,bend)); 861 block_sizes[nDMs] = bend - bsrt; 862 ntot += block_sizes[nDMs]; 863 nDMs++; 864 // cleanup 865 PetscCheck(ntot == nloc, PetscObjectComm((PetscObject)pc), PETSC_ERR_ARG_WRONG, "n total != n local: %" PetscInt_FMT " != %" PetscInt_FMT, ntot, nloc); 866 PetscCall(ISRestoreIndices(isrow, &rowindices)); 867 PetscCall(ISRestoreIndices(isicol, &icolindices)); 868 PetscCall(PetscRealloc(sizeof(PetscInt) * nDMs, &block_sizes)); 869 PetscCall(MatCreateVecs(A, &jac->vec_diag, NULL)); 870 PetscCall(PetscInfo(pc, "Setup Matrix based meta data (not DMComposite not attached to PC) %" PetscInt_FMT " sub domains\n", nDMs)); 871 } 872 PetscCall(ISDestroy(&isrow)); 873 PetscCall(ISDestroy(&isicol)); 874 jac->num_dms = nDMs; 875 PetscCall(VecGetLocalSize(jac->vec_diag, &n)); 876 jac->n = n; 877 jac->d_idiag_k = new Kokkos::View<PetscScalar *, Kokkos::LayoutRight>("idiag", n); 878 // options 879 PetscCall(PCBJKOKKOSCreateKSP_BJKOKKOS(pc)); 880 PetscCall(KSPSetFromOptions(jac->ksp)); 881 PetscCall(PetscObjectTypeCompareAny((PetscObject)jac->ksp, &flg, KSPBICG, "")); 882 if (flg) { 883 jac->ksp_type_idx = BATCH_KSP_BICG_IDX; 884 jac->nwork = 7; 885 } else { 886 PetscCall(PetscObjectTypeCompareAny((PetscObject)jac->ksp, &flg, KSPTFQMR, "")); 887 if (flg) { 888 jac->ksp_type_idx = BATCH_KSP_TFQMR_IDX; 889 jac->nwork = 10; 890 } else { 891 #if defined(PETSC_HAVE_KOKKOS_KERNELS_BATCH) 892 PetscCall(PetscObjectTypeCompareAny((PetscObject)jac->ksp, &flg, KSPGMRES, "")); 893 PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONG, "Unsupported batch ksp type"); 894 jac->ksp_type_idx = BATCH_KSP_GMRESKK_IDX; 895 jac->nwork = 0; 896 #else 897 KSPType ksptype; 898 PetscCall(KSPGetType(jac->ksp, &ksptype)); 899 PetscCheck(flg, PetscObjectComm((PetscObject)pc), PETSC_ERR_ARG_WRONG, "Type: %s not supported in complex", ksptype); 900 #endif 901 } 902 } 903 PetscOptionsBegin(PetscObjectComm((PetscObject)jac->ksp), ((PetscObject)jac->ksp)->prefix, "Options for Kokkos batch solver", "none"); 904 PetscCall(PetscOptionsBool("-ksp_converged_reason", "", "bjkokkos.kokkos.cxx.c", jac->reason, &jac->reason, NULL)); 905 PetscCall(PetscOptionsBool("-ksp_monitor", "", "bjkokkos.kokkos.cxx.c", jac->monitor, &jac->monitor, NULL)); 906 PetscCall(PetscOptionsInt("-ksp_batch_target", "", "bjkokkos.kokkos.cxx.c", jac->batch_target, &jac->batch_target, NULL)); 907 PetscCall(PetscOptionsInt("-ksp_rank_target", "", "bjkokkos.kokkos.cxx.c", jac->rank_target, &jac->rank_target, NULL)); 908 PetscCall(PetscOptionsInt("-ksp_batch_nsolves_team", "", "bjkokkos.kokkos.cxx.c", jac->nsolves_team, &jac->nsolves_team, NULL)); 909 PetscCheck(jac->batch_target < jac->num_dms, PETSC_COMM_WORLD, PETSC_ERR_ARG_WRONG, "-ksp_batch_target (%" PetscInt_FMT ") >= number of DMs (%" PetscInt_FMT ")", jac->batch_target, jac->num_dms); 910 PetscOptionsEnd(); 911 // get blocks - jac->d_bid_eqOffset_k 912 if (pack) { 913 PetscCall(PetscMalloc(sizeof(*subX) * nDMs, &subX)); 914 PetscCall(PetscMalloc(sizeof(*subDM) * nDMs, &subDM)); 915 } 916 PetscCall(PetscMalloc(sizeof(*jac->dm_Nf) * nDMs, &jac->dm_Nf)); 917 PetscCall(PetscInfo(pc, "Have %" PetscInt_FMT " blocks, n=%" PetscInt_FMT " rtol=%g type = %s\n", nDMs, n, (double)jac->ksp->rtol, ((PetscObject)jac->ksp)->type_name)); 918 if (pack) PetscCall(DMCompositeGetEntriesArray(pack, subDM)); 919 jac->nBlocks = 0; 920 for (PetscInt ii = 0; ii < nDMs; ii++) { 921 PetscInt Nf; 922 if (subDM) { 923 DM dm = subDM[ii]; 924 PetscSection section; 925 PetscCall(DMGetLocalSection(dm, §ion)); 926 PetscCall(PetscSectionGetNumFields(section, &Nf)); 927 } else Nf = 1; 928 jac->nBlocks += Nf; 929 #if PCBJKOKKOS_VERBOSE_LEVEL <= 2 930 if (ii == 0) PetscCall(PetscInfo(pc, "%" PetscInt_FMT ") %" PetscInt_FMT " blocks (%" PetscInt_FMT " total)\n", ii, Nf, jac->nBlocks)); 931 #else 932 PetscCall(PetscInfo(pc, "%" PetscInt_FMT ") %" PetscInt_FMT " blocks (%" PetscInt_FMT " total)\n", ii, Nf, jac->nBlocks)); 933 #endif 934 jac->dm_Nf[ii] = Nf; 935 } 936 { // d_bid_eqOffset_k 937 Kokkos::View<PetscInt *, Kokkos::LayoutRight, Kokkos::HostSpace> h_block_offsets("block_offsets", jac->nBlocks + 1); 938 if (pack) PetscCall(DMCompositeGetAccessArray(pack, jac->vec_diag, nDMs, NULL, subX)); 939 h_block_offsets[0] = 0; 940 jac->const_block_size = -1; 941 for (PetscInt ii = 0, idx = 0; ii < nDMs; ii++) { 942 PetscInt nloc, nblk; 943 if (pack) PetscCall(VecGetSize(subX[ii], &nloc)); 944 else nloc = block_sizes[ii]; 945 nblk = nloc / jac->dm_Nf[ii]; 946 PetscCheck(nloc % jac->dm_Nf[ii] == 0, PetscObjectComm((PetscObject)pc), PETSC_ERR_USER, "nloc%%jac->dm_Nf[ii] (%" PetscInt_FMT ") != 0 DMs", nloc % jac->dm_Nf[ii]); 947 for (PetscInt jj = 0; jj < jac->dm_Nf[ii]; jj++, idx++) { 948 h_block_offsets[idx + 1] = h_block_offsets[idx] + nblk; 949 #if PCBJKOKKOS_VERBOSE_LEVEL <= 2 950 if (idx == 0) PetscCall(PetscInfo(pc, "Add first of %" PetscInt_FMT " blocks with %" PetscInt_FMT " equations\n", jac->nBlocks, nblk)); 951 #else 952 PetscCall(PetscInfo(pc, "\t%" PetscInt_FMT ") Add block with %" PetscInt_FMT " equations of %" PetscInt_FMT "\n", idx + 1, nblk, jac->nBlocks)); 953 #endif 954 if (jac->const_block_size == -1) jac->const_block_size = nblk; 955 else if (jac->const_block_size > 0 && jac->const_block_size != nblk) jac->const_block_size = 0; 956 } 957 } 958 if (pack) { 959 PetscCall(DMCompositeRestoreAccessArray(pack, jac->vec_diag, jac->nBlocks, NULL, subX)); 960 PetscCall(PetscFree(subX)); 961 PetscCall(PetscFree(subDM)); 962 } 963 jac->d_bid_eqOffset_k = new Kokkos::View<PetscInt *, Kokkos::LayoutRight>(Kokkos::create_mirror(Kokkos::DefaultExecutionSpace::memory_space(), h_block_offsets)); 964 Kokkos::deep_copy(*jac->d_bid_eqOffset_k, h_block_offsets); 965 } 966 if (!pack) PetscCall(PetscFree(block_sizes)); 967 } 968 { // get jac->d_idiag_k (PC setup), 969 const PetscInt *d_ai, *d_aj; 970 const PetscScalar *d_aa; 971 const PetscInt conc = Kokkos::DefaultExecutionSpace().concurrency(), openmp = !!(conc < 1000), team_size = (openmp == 0 && PCBJKOKKOS_VEC_SIZE != 1) ? PCBJKOKKOS_TEAM_SIZE : 1; 972 const PetscInt *d_bid_eqOffset = jac->d_bid_eqOffset_k->data(), *r = jac->d_isrow_k->data(), *ic = jac->d_isicol_k->data(); 973 PetscScalar *d_idiag = jac->d_idiag_k->data(), *dummy; 974 PetscMemType mtype; 975 PetscCall(MatSeqAIJGetCSRAndMemType(Aseq, &d_ai, &d_aj, &dummy, &mtype)); 976 d_aa = dummy; 977 Kokkos::parallel_for( 978 "Diag", Kokkos::TeamPolicy<>(jac->nBlocks, team_size, PCBJKOKKOS_VEC_SIZE), KOKKOS_LAMBDA(const team_member team) { 979 const PetscInt blkID = team.league_rank(); 980 Kokkos::parallel_for(Kokkos::TeamThreadRange(team, d_bid_eqOffset[blkID], d_bid_eqOffset[blkID + 1]), [=](const int rowb) { 981 const PetscInt rowa = ic[rowb], ai = d_ai[rowa], *aj = d_aj + ai; // grab original data 982 const PetscScalar *aa = d_aa + ai; 983 const PetscInt nrow = d_ai[rowa + 1] - ai; 984 int found; 985 Kokkos::parallel_reduce( 986 Kokkos::ThreadVectorRange(team, nrow), 987 [=](const int &j, int &count) { 988 const PetscInt colb = r[aj[j]]; 989 if (colb == rowb) { 990 d_idiag[rowb] = 1. / aa[j]; 991 count++; 992 } 993 }, 994 found); 995 #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL) 996 if (found != 1) Kokkos::single(Kokkos::PerThread(team), [=]() { printf("ERRORrow %d) found = %d\n", rowb, found); }); 997 #endif 998 }); 999 }); 1000 } 1001 } 1002 PetscFunctionReturn(PETSC_SUCCESS); 1003 } 1004 1005 /* Default destroy, if it has never been setup */ 1006 static PetscErrorCode PCReset_BJKOKKOS(PC pc) 1007 { 1008 PC_PCBJKOKKOS *jac = (PC_PCBJKOKKOS *)pc->data; 1009 1010 PetscFunctionBegin; 1011 PetscCall(KSPDestroy(&jac->ksp)); 1012 PetscCall(VecDestroy(&jac->vec_diag)); 1013 if (jac->d_bid_eqOffset_k) delete jac->d_bid_eqOffset_k; 1014 if (jac->d_idiag_k) delete jac->d_idiag_k; 1015 if (jac->d_isrow_k) delete jac->d_isrow_k; 1016 if (jac->d_isicol_k) delete jac->d_isicol_k; 1017 jac->d_bid_eqOffset_k = NULL; 1018 jac->d_idiag_k = NULL; 1019 jac->d_isrow_k = NULL; 1020 jac->d_isicol_k = NULL; 1021 PetscCall(PetscObjectComposeFunction((PetscObject)pc, "PCBJKOKKOSGetKSP_C", NULL)); // not published now (causes configure errors) 1022 PetscCall(PetscObjectComposeFunction((PetscObject)pc, "PCBJKOKKOSSetKSP_C", NULL)); 1023 PetscCall(PetscFree(jac->dm_Nf)); 1024 jac->dm_Nf = NULL; 1025 if (jac->rowOffsets) delete jac->rowOffsets; 1026 if (jac->colIndices) delete jac->colIndices; 1027 if (jac->batch_b) delete jac->batch_b; 1028 if (jac->batch_x) delete jac->batch_x; 1029 if (jac->batch_values) delete jac->batch_values; 1030 jac->rowOffsets = NULL; 1031 jac->colIndices = NULL; 1032 jac->batch_b = NULL; 1033 jac->batch_x = NULL; 1034 jac->batch_values = NULL; 1035 PetscFunctionReturn(PETSC_SUCCESS); 1036 } 1037 1038 static PetscErrorCode PCDestroy_BJKOKKOS(PC pc) 1039 { 1040 PetscFunctionBegin; 1041 PetscCall(PCReset_BJKOKKOS(pc)); 1042 PetscCall(PetscFree(pc->data)); 1043 PetscFunctionReturn(PETSC_SUCCESS); 1044 } 1045 1046 static PetscErrorCode PCView_BJKOKKOS(PC pc, PetscViewer viewer) 1047 { 1048 PC_PCBJKOKKOS *jac = (PC_PCBJKOKKOS *)pc->data; 1049 PetscBool iascii; 1050 1051 PetscFunctionBegin; 1052 if (!jac->ksp) PetscCall(PCBJKOKKOSCreateKSP_BJKOKKOS(pc)); 1053 PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 1054 if (iascii) { 1055 PetscCall(PetscViewerASCIIPrintf(viewer, " Batched device linear solver: Krylov (KSP) method with Jacobi preconditioning\n")); 1056 PetscCall(PetscViewerASCIIPrintf(viewer, "\t\tnwork = %" PetscInt_FMT ", rel tol = %e, abs tol = %e, div tol = %e, max it =%" PetscInt_FMT ", type = %s\n", jac->nwork, jac->ksp->rtol, jac->ksp->abstol, jac->ksp->divtol, jac->ksp->max_it, 1057 ((PetscObject)jac->ksp)->type_name)); 1058 } 1059 PetscFunctionReturn(PETSC_SUCCESS); 1060 } 1061 1062 static PetscErrorCode PCSetFromOptions_BJKOKKOS(PC pc, PetscOptionItems *PetscOptionsObject) 1063 { 1064 PetscFunctionBegin; 1065 PetscOptionsHeadBegin(PetscOptionsObject, "PC BJKOKKOS options"); 1066 PetscOptionsHeadEnd(); 1067 PetscFunctionReturn(PETSC_SUCCESS); 1068 } 1069 1070 static PetscErrorCode PCBJKOKKOSSetKSP_BJKOKKOS(PC pc, KSP ksp) 1071 { 1072 PC_PCBJKOKKOS *jac = (PC_PCBJKOKKOS *)pc->data; 1073 1074 PetscFunctionBegin; 1075 PetscCall(PetscObjectReference((PetscObject)ksp)); 1076 PetscCall(KSPDestroy(&jac->ksp)); 1077 jac->ksp = ksp; 1078 PetscFunctionReturn(PETSC_SUCCESS); 1079 } 1080 1081 /*@C 1082 PCBJKOKKOSSetKSP - Sets the `KSP` context for `PCBJKOKKOS` 1083 1084 Collective 1085 1086 Input Parameters: 1087 + pc - the `PCBJKOKKOS` preconditioner context 1088 - ksp - the `KSP` solver 1089 1090 Level: advanced 1091 1092 Notes: 1093 The `PC` and the `KSP` must have the same communicator 1094 1095 If the `PC` is not `PCBJKOKKOS` this function returns without doing anything 1096 1097 .seealso: [](ch_ksp), `PCBJKOKKOSGetKSP()`, `PCBJKOKKOS` 1098 @*/ 1099 PetscErrorCode PCBJKOKKOSSetKSP(PC pc, KSP ksp) 1100 { 1101 PetscFunctionBegin; 1102 PetscValidHeaderSpecific(pc, PC_CLASSID, 1); 1103 PetscValidHeaderSpecific(ksp, KSP_CLASSID, 2); 1104 PetscCheckSameComm(pc, 1, ksp, 2); 1105 PetscTryMethod(pc, "PCBJKOKKOSSetKSP_C", (PC, KSP), (pc, ksp)); 1106 PetscFunctionReturn(PETSC_SUCCESS); 1107 } 1108 1109 static PetscErrorCode PCBJKOKKOSGetKSP_BJKOKKOS(PC pc, KSP *ksp) 1110 { 1111 PC_PCBJKOKKOS *jac = (PC_PCBJKOKKOS *)pc->data; 1112 1113 PetscFunctionBegin; 1114 if (!jac->ksp) PetscCall(PCBJKOKKOSCreateKSP_BJKOKKOS(pc)); 1115 *ksp = jac->ksp; 1116 PetscFunctionReturn(PETSC_SUCCESS); 1117 } 1118 1119 /*@C 1120 PCBJKOKKOSGetKSP - Gets the `KSP` context for the `PCBJKOKKOS` preconditioner 1121 1122 Not Collective but `KSP` returned is parallel if `PC` was parallel 1123 1124 Input Parameter: 1125 . pc - the preconditioner context 1126 1127 Output Parameter: 1128 . ksp - the `KSP` solver 1129 1130 Level: advanced 1131 1132 Notes: 1133 You must call `KSPSetUp()` before calling `PCBJKOKKOSGetKSP()`. 1134 1135 If the `PC` is not a `PCBJKOKKOS` object it raises an error 1136 1137 .seealso: [](ch_ksp), `PCBJKOKKOS`, `PCBJKOKKOSSetKSP()` 1138 @*/ 1139 PetscErrorCode PCBJKOKKOSGetKSP(PC pc, KSP *ksp) 1140 { 1141 PetscFunctionBegin; 1142 PetscValidHeaderSpecific(pc, PC_CLASSID, 1); 1143 PetscAssertPointer(ksp, 2); 1144 PetscUseMethod(pc, "PCBJKOKKOSGetKSP_C", (PC, KSP *), (pc, ksp)); 1145 PetscFunctionReturn(PETSC_SUCCESS); 1146 } 1147 1148 /*MC 1149 PCBJKOKKOS - Defines a preconditioner that applies a Krylov solver and preconditioner to the blocks in a `MATSEQAIJ` matrix on the GPU using Kokkos 1150 1151 Options Database Key: 1152 . -pc_bjkokkos_ - options prefix for its `KSP` options 1153 1154 Level: intermediate 1155 1156 Note: 1157 For use with -ksp_type preonly to bypass any computation on the CPU 1158 1159 Developer Notes: 1160 The documentation is incomplete. Is this a block Jacobi preconditioner? 1161 1162 Why does it have its own `KSP`? Where is the `KSP` run if used with -ksp_type preonly? 1163 1164 .seealso: [](ch_ksp), `PCCreate()`, `PCSetType()`, `PCType`, `PC`, `PCBJACOBI`, 1165 `PCSHELL`, `PCCOMPOSITE`, `PCSetUseAmat()`, `PCBJKOKKOSGetKSP()` 1166 M*/ 1167 1168 PETSC_EXTERN PetscErrorCode PCCreate_BJKOKKOS(PC pc) 1169 { 1170 PC_PCBJKOKKOS *jac; 1171 1172 PetscFunctionBegin; 1173 PetscCall(PetscNew(&jac)); 1174 pc->data = (void *)jac; 1175 1176 jac->ksp = NULL; 1177 jac->vec_diag = NULL; 1178 jac->d_bid_eqOffset_k = NULL; 1179 jac->d_idiag_k = NULL; 1180 jac->d_isrow_k = NULL; 1181 jac->d_isicol_k = NULL; 1182 jac->nBlocks = 1; 1183 jac->max_nits = 0; 1184 1185 PetscCall(PetscMemzero(pc->ops, sizeof(struct _PCOps))); 1186 pc->ops->apply = PCApply_BJKOKKOS; 1187 pc->ops->applytranspose = NULL; 1188 pc->ops->setup = PCSetUp_BJKOKKOS; 1189 pc->ops->reset = PCReset_BJKOKKOS; 1190 pc->ops->destroy = PCDestroy_BJKOKKOS; 1191 pc->ops->setfromoptions = PCSetFromOptions_BJKOKKOS; 1192 pc->ops->view = PCView_BJKOKKOS; 1193 1194 jac->rowOffsets = NULL; 1195 jac->colIndices = NULL; 1196 jac->batch_b = NULL; 1197 jac->batch_x = NULL; 1198 jac->batch_values = NULL; 1199 1200 PetscCall(PetscObjectComposeFunction((PetscObject)pc, "PCBJKOKKOSGetKSP_C", PCBJKOKKOSGetKSP_BJKOKKOS)); 1201 PetscCall(PetscObjectComposeFunction((PetscObject)pc, "PCBJKOKKOSSetKSP_C", PCBJKOKKOSSetKSP_BJKOKKOS)); 1202 PetscFunctionReturn(PETSC_SUCCESS); 1203 } 1204