124c02a0fSBarry Smith 2b45d2f2cSJed Brown #include <petsc-private/pcimpl.h> /*I "petscpc.h" I*/ 3c6db04a5SJed Brown #include <../src/mat/impls/aij/seq/aij.h> 424c02a0fSBarry Smith 524c02a0fSBarry Smith /* 624c02a0fSBarry Smith Private context (data structure) for the CP preconditioner. 724c02a0fSBarry Smith */ 824c02a0fSBarry Smith typedef struct { 924c02a0fSBarry Smith PetscInt n,m; 1024c02a0fSBarry Smith Vec work; 1124c02a0fSBarry Smith PetscScalar *d; /* sum of squares of each column */ 1224c02a0fSBarry Smith PetscScalar *a; /* non-zeros by column */ 1324c02a0fSBarry Smith PetscInt *i,*j; /* offsets of nonzeros by column, non-zero indices by column */ 1424c02a0fSBarry Smith } PC_CP; 1524c02a0fSBarry Smith 1624c02a0fSBarry Smith 1724c02a0fSBarry Smith #undef __FUNCT__ 1824c02a0fSBarry Smith #define __FUNCT__ "PCSetUp_CP" 1924c02a0fSBarry Smith static PetscErrorCode PCSetUp_CP(PC pc) 2024c02a0fSBarry Smith { 2124c02a0fSBarry Smith PC_CP *cp = (PC_CP*)pc->data; 2224c02a0fSBarry Smith PetscInt i,j,*colcnt; 2324c02a0fSBarry Smith PetscErrorCode ierr; 24ace3abfcSBarry Smith PetscBool flg; 2524c02a0fSBarry Smith Mat_SeqAIJ *aij = (Mat_SeqAIJ*)pc->pmat->data; 2624c02a0fSBarry Smith 2724c02a0fSBarry Smith PetscFunctionBegin; 28251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)pc->pmat,MATSEQAIJ,&flg);CHKERRQ(ierr); 29ce94432eSBarry Smith if (!flg) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Currently only handles SeqAIJ matrices"); 3024c02a0fSBarry Smith 3124c02a0fSBarry Smith ierr = MatGetLocalSize(pc->pmat,&cp->m,&cp->n);CHKERRQ(ierr); 32e32f2f54SBarry Smith if (cp->m != cp->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Currently only for square matrices"); 3324c02a0fSBarry Smith 340298fd71SBarry Smith if (!cp->work) {ierr = MatGetVecs(pc->pmat,&cp->work,NULL);CHKERRQ(ierr);} 35785e854fSJed Brown if (!cp->d) {ierr = PetscMalloc1(cp->n,&cp->d);CHKERRQ(ierr);} 3624c02a0fSBarry Smith if (cp->a && pc->flag != SAME_NONZERO_PATTERN) { 3724c02a0fSBarry Smith ierr = PetscFree3(cp->a,cp->i,cp->j);CHKERRQ(ierr); 3824c02a0fSBarry Smith cp->a = 0; 3924c02a0fSBarry Smith } 4024c02a0fSBarry Smith 4124c02a0fSBarry Smith /* convert to column format */ 4224c02a0fSBarry Smith if (!cp->a) { 43dcca6d9dSJed Brown ierr = PetscMalloc3(aij->nz,&cp->a,cp->n+1,&cp->i,aij->nz,&cp->j);CHKERRQ(ierr); 4424c02a0fSBarry Smith } 451795a4d1SJed Brown ierr = PetscCalloc1(cp->n,&colcnt);CHKERRQ(ierr); 4624c02a0fSBarry Smith 472fa5cd67SKarl Rupp for (i=0; i<aij->nz; i++) colcnt[aij->j[i]]++; 48e60cf9a0SBarry Smith cp->i[0] = 0; 492fa5cd67SKarl Rupp for (i=0; i<cp->n; i++) cp->i[i+1] = cp->i[i] + colcnt[i]; 5024c02a0fSBarry Smith ierr = PetscMemzero(colcnt,cp->n*sizeof(PetscInt));CHKERRQ(ierr); 5124c02a0fSBarry Smith for (i=0; i<cp->m; i++) { /* over rows */ 5224c02a0fSBarry Smith for (j=aij->i[i]; j<aij->i[i+1]; j++) { /* over columns in row */ 5324c02a0fSBarry Smith cp->j[cp->i[aij->j[j]]+colcnt[aij->j[j]]] = i; 5424c02a0fSBarry Smith cp->a[cp->i[aij->j[j]]+colcnt[aij->j[j]]++] = aij->a[j]; 5524c02a0fSBarry Smith } 5624c02a0fSBarry Smith } 5724c02a0fSBarry Smith ierr = PetscFree(colcnt);CHKERRQ(ierr); 5824c02a0fSBarry Smith 5924c02a0fSBarry Smith /* compute sum of squares of each column d[] */ 6024c02a0fSBarry Smith for (i=0; i<cp->n; i++) { /* over columns */ 6175567043SBarry Smith cp->d[i] = 0.; 622fa5cd67SKarl Rupp for (j=cp->i[i]; j<cp->i[i+1]; j++) cp->d[i] += cp->a[j]*cp->a[j]; /* over rows in column */ 6324c02a0fSBarry Smith cp->d[i] = 1.0/cp->d[i]; 6424c02a0fSBarry Smith } 6524c02a0fSBarry Smith PetscFunctionReturn(0); 6624c02a0fSBarry Smith } 6724c02a0fSBarry Smith /* -------------------------------------------------------------------------- */ 6824c02a0fSBarry Smith #undef __FUNCT__ 6924c02a0fSBarry Smith #define __FUNCT__ "PCApply_CP" 7024c02a0fSBarry Smith static PetscErrorCode PCApply_CP(PC pc,Vec bb,Vec xx) 7124c02a0fSBarry Smith { 7224c02a0fSBarry Smith PC_CP *cp = (PC_CP*)pc->data; 7324c02a0fSBarry Smith PetscErrorCode ierr; 7424c02a0fSBarry Smith PetscScalar *b,*x,xt; 7524c02a0fSBarry Smith PetscInt i,j; 7624c02a0fSBarry Smith 7724c02a0fSBarry Smith PetscFunctionBegin; 7824c02a0fSBarry Smith ierr = VecCopy(bb,cp->work);CHKERRQ(ierr); 7924c02a0fSBarry Smith ierr = VecGetArray(cp->work,&b);CHKERRQ(ierr); 8024c02a0fSBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 8124c02a0fSBarry Smith 8224c02a0fSBarry Smith for (i=0; i<cp->n; i++) { /* over columns */ 8375567043SBarry Smith xt = 0.; 842fa5cd67SKarl Rupp for (j=cp->i[i]; j<cp->i[i+1]; j++) xt += cp->a[j]*b[cp->j[j]]; /* over rows in column */ 8524c02a0fSBarry Smith xt *= cp->d[i]; 8624c02a0fSBarry Smith x[i] = xt; 872fa5cd67SKarl Rupp for (j=cp->i[i]; j<cp->i[i+1]; j++) b[cp->j[j]] -= xt*cp->a[j]; /* over rows in column updating b*/ 8824c02a0fSBarry Smith } 8924c02a0fSBarry Smith for (i=cp->n-1; i>-1; i--) { /* over columns */ 9075567043SBarry Smith xt = 0.; 912fa5cd67SKarl Rupp for (j=cp->i[i]; j<cp->i[i+1]; j++) xt += cp->a[j]*b[cp->j[j]]; /* over rows in column */ 9224c02a0fSBarry Smith xt *= cp->d[i]; 9324c02a0fSBarry Smith x[i] = xt; 942fa5cd67SKarl Rupp for (j=cp->i[i]; j<cp->i[i+1]; j++) b[cp->j[j]] -= xt*cp->a[j]; /* over rows in column updating b*/ 9524c02a0fSBarry Smith } 9624c02a0fSBarry Smith 9724c02a0fSBarry Smith ierr = VecRestoreArray(cp->work,&b);CHKERRQ(ierr); 9824c02a0fSBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 9924c02a0fSBarry Smith PetscFunctionReturn(0); 10024c02a0fSBarry Smith } 10124c02a0fSBarry Smith /* -------------------------------------------------------------------------- */ 10224c02a0fSBarry Smith #undef __FUNCT__ 10369d2c0f9SBarry Smith #define __FUNCT__ "PCReset_CP" 10469d2c0f9SBarry Smith static PetscErrorCode PCReset_CP(PC pc) 10524c02a0fSBarry Smith { 10624c02a0fSBarry Smith PC_CP *cp = (PC_CP*)pc->data; 10724c02a0fSBarry Smith PetscErrorCode ierr; 10824c02a0fSBarry Smith 10924c02a0fSBarry Smith PetscFunctionBegin; 11024c02a0fSBarry Smith ierr = PetscFree(cp->d);CHKERRQ(ierr); 1116bf464f9SBarry Smith ierr = VecDestroy(&cp->work);CHKERRQ(ierr); 11224c02a0fSBarry Smith ierr = PetscFree3(cp->a,cp->i,cp->j);CHKERRQ(ierr); 11369d2c0f9SBarry Smith PetscFunctionReturn(0); 11469d2c0f9SBarry Smith } 11569d2c0f9SBarry Smith 11669d2c0f9SBarry Smith #undef __FUNCT__ 11769d2c0f9SBarry Smith #define __FUNCT__ "PCDestroy_CP" 11869d2c0f9SBarry Smith static PetscErrorCode PCDestroy_CP(PC pc) 11969d2c0f9SBarry Smith { 12069d2c0f9SBarry Smith PC_CP *cp = (PC_CP*)pc->data; 12169d2c0f9SBarry Smith PetscErrorCode ierr; 12269d2c0f9SBarry Smith 12369d2c0f9SBarry Smith PetscFunctionBegin; 12469d2c0f9SBarry Smith ierr = PCReset_CP(pc);CHKERRQ(ierr); 12569d2c0f9SBarry Smith ierr = PetscFree(cp->d);CHKERRQ(ierr); 12669d2c0f9SBarry Smith ierr = PetscFree3(cp->a,cp->i,cp->j);CHKERRQ(ierr); 127c31cb41cSBarry Smith ierr = PetscFree(pc->data);CHKERRQ(ierr); 12824c02a0fSBarry Smith PetscFunctionReturn(0); 12924c02a0fSBarry Smith } 13024c02a0fSBarry Smith 13124c02a0fSBarry Smith #undef __FUNCT__ 13224c02a0fSBarry Smith #define __FUNCT__ "PCSetFromOptions_CP" 13324c02a0fSBarry Smith static PetscErrorCode PCSetFromOptions_CP(PC pc) 13424c02a0fSBarry Smith { 13524c02a0fSBarry Smith PetscFunctionBegin; 13624c02a0fSBarry Smith PetscFunctionReturn(0); 13724c02a0fSBarry Smith } 13824c02a0fSBarry Smith 13924c02a0fSBarry Smith 14024c02a0fSBarry Smith /*MC 14124c02a0fSBarry Smith PCCP - a "column-projection" preconditioner 14224c02a0fSBarry Smith 14324c02a0fSBarry Smith This is a terrible preconditioner and is not recommended, ever! 14424c02a0fSBarry Smith 14524c02a0fSBarry Smith Loops over the entries of x computing dx_i to 14624c02a0fSBarry Smith $ 14724c02a0fSBarry Smith $ min || b - A(x + dx_i e_i ||_2 14824c02a0fSBarry Smith $ dx_i 14924c02a0fSBarry Smith $ 15024c02a0fSBarry Smith $ That is, it changes a single entry of x to minimize the new residual. 15124c02a0fSBarry Smith $ Let A_i represent the ith column of A, then the minimization can be written as 15224c02a0fSBarry Smith $ 15324c02a0fSBarry Smith $ min || r - (dx_i) A e_i ||_2 15424c02a0fSBarry Smith $ dx_i 15524c02a0fSBarry Smith $ or min || r - (dx_i) A_i ||_2 15624c02a0fSBarry Smith $ dx_i 15724c02a0fSBarry Smith $ 15824c02a0fSBarry Smith $ take the derivative with respect to dx_i to obtain 15924c02a0fSBarry Smith $ dx_i = (A_i^T A_i)^(-1) A_i^T r 16024c02a0fSBarry Smith $ 16124c02a0fSBarry Smith $ This algorithm can be thought of as Gauss-Seidel on the normal equations 16224c02a0fSBarry Smith 16324c02a0fSBarry Smith Notes: This proceedure can also be done with block columns or any groups of columns 16424c02a0fSBarry Smith but this is not coded. 16524c02a0fSBarry Smith 16624c02a0fSBarry Smith These "projections" can be done simultaneously for all columns (similar to Jacobi) 16724c02a0fSBarry Smith or sequentially (similar to Gauss-Seidel/SOR). This is only coded for SOR type. 16824c02a0fSBarry Smith 16924c02a0fSBarry Smith This is related to, but not the same as "row projection" methods. 17024c02a0fSBarry Smith 17124c02a0fSBarry Smith This is currently coded only for SeqAIJ matrices in sequential (SOR) form. 17228529972SSatish Balay 17328529972SSatish Balay Level: intermediate 17424c02a0fSBarry Smith 17524c02a0fSBarry Smith .seealso: PCCreate(), PCSetType(), PCType (for list of available types), PCJACOBI, PCSOR 17624c02a0fSBarry Smith 17724c02a0fSBarry Smith M*/ 17824c02a0fSBarry Smith 17924c02a0fSBarry Smith #undef __FUNCT__ 18024c02a0fSBarry Smith #define __FUNCT__ "PCCreate_CP" 1818cc058d9SJed Brown PETSC_EXTERN PetscErrorCode PCCreate_CP(PC pc) 18224c02a0fSBarry Smith { 18324c02a0fSBarry Smith PC_CP *cp; 18424c02a0fSBarry Smith PetscErrorCode ierr; 18524c02a0fSBarry Smith 18624c02a0fSBarry Smith PetscFunctionBegin; 187*b00a9115SJed Brown ierr = PetscNewLog(pc,&cp);CHKERRQ(ierr); 18824c02a0fSBarry Smith pc->data = (void*)cp; 18924c02a0fSBarry Smith 19024c02a0fSBarry Smith pc->ops->apply = PCApply_CP; 19124c02a0fSBarry Smith pc->ops->applytranspose = PCApply_CP; 19224c02a0fSBarry Smith pc->ops->setup = PCSetUp_CP; 19369d2c0f9SBarry Smith pc->ops->reset = PCReset_CP; 19424c02a0fSBarry Smith pc->ops->destroy = PCDestroy_CP; 19524c02a0fSBarry Smith pc->ops->setfromoptions = PCSetFromOptions_CP; 19624c02a0fSBarry Smith pc->ops->view = 0; 19724c02a0fSBarry Smith pc->ops->applyrichardson = 0; 19824c02a0fSBarry Smith PetscFunctionReturn(0); 19924c02a0fSBarry Smith } 20024c02a0fSBarry Smith 20124c02a0fSBarry Smith 202