1dba47a55SKris Buschelman 2c6db04a5SJed Brown #include <../src/ksp/pc/impls/factor/icc/icc.h> /*I "petscpc.h" I*/ 39b54502bSHong Zhang 4d71ae5a4SJacob Faibussowitsch static PetscErrorCode PCSetUp_ICC(PC pc) 5d71ae5a4SJacob Faibussowitsch { 69b54502bSHong Zhang PC_ICC *icc = (PC_ICC *)pc->data; 72c7c0729SBarry Smith IS perm = NULL, cperm = NULL; 8f3a39becSBarry Smith MatInfo info; 9ea799195SBarry Smith MatSolverType stype; 1000e125f8SBarry Smith MatFactorError err; 114ac6704cSBarry Smith PetscBool canuseordering; 12f023e1d5SPierre Jolivet const char *prefix; 139b54502bSHong Zhang 149b54502bSHong Zhang PetscFunctionBegin; 15c6e4fdc6SHong Zhang pc->failedreason = PC_NOERROR; 169b54502bSHong Zhang 1726cc229bSBarry Smith PetscCall(PCGetOptionsPrefix(pc, &prefix)); 1826cc229bSBarry Smith PetscCall(MatSetOptionsPrefixFactor(pc->pmat, prefix)); 1926cc229bSBarry Smith 209566063dSJacob Faibussowitsch PetscCall(MatSetErrorIfFailure(pc->pmat, pc->erroriffailure)); 219b54502bSHong Zhang if (!pc->setupcalled) { 22*03e5aca4SStefano Zampini PetscCall(PCFactorSetUpMatSolverType(pc)); 239566063dSJacob Faibussowitsch PetscCall(MatFactorGetCanUseOrdering(((PC_Factor *)icc)->fact, &canuseordering)); 24f73b0415SBarry Smith if (canuseordering) { 259566063dSJacob Faibussowitsch PetscCall(PCFactorSetDefaultOrdering_Factor(pc)); 269566063dSJacob Faibussowitsch PetscCall(MatGetOrdering(pc->pmat, ((PC_Factor *)icc)->ordering, &perm, &cperm)); 272c7c0729SBarry Smith } 289566063dSJacob Faibussowitsch PetscCall(MatICCFactorSymbolic(((PC_Factor *)icc)->fact, pc->pmat, perm, &((PC_Factor *)icc)->info)); 299b54502bSHong Zhang } else if (pc->flag != SAME_NONZERO_PATTERN) { 309566063dSJacob Faibussowitsch PetscCall(MatDestroy(&((PC_Factor *)icc)->fact)); 31*03e5aca4SStefano Zampini PetscCall(PCFactorSetUpMatSolverType(pc)); 329566063dSJacob Faibussowitsch PetscCall(MatFactorGetCanUseOrdering(((PC_Factor *)icc)->fact, &canuseordering)); 33f73b0415SBarry Smith if (canuseordering) { 349566063dSJacob Faibussowitsch PetscCall(PCFactorSetDefaultOrdering_Factor(pc)); 359566063dSJacob Faibussowitsch PetscCall(MatGetOrdering(pc->pmat, ((PC_Factor *)icc)->ordering, &perm, &cperm)); 362c7c0729SBarry Smith } 379566063dSJacob Faibussowitsch PetscCall(MatICCFactorSymbolic(((PC_Factor *)icc)->fact, pc->pmat, perm, &((PC_Factor *)icc)->info)); 389b54502bSHong Zhang } 399566063dSJacob Faibussowitsch PetscCall(MatGetInfo(((PC_Factor *)icc)->fact, MAT_LOCAL, &info)); 403d1c1ea0SBarry Smith icc->hdr.actualfill = info.fill_ratio_needed; 41f3a39becSBarry Smith 429566063dSJacob Faibussowitsch PetscCall(ISDestroy(&cperm)); 439566063dSJacob Faibussowitsch PetscCall(ISDestroy(&perm)); 446baea169SHong Zhang 459566063dSJacob Faibussowitsch PetscCall(MatFactorGetError(((PC_Factor *)icc)->fact, &err)); 4600e125f8SBarry Smith if (err) { /* FactorSymbolic() fails */ 4700e125f8SBarry Smith pc->failedreason = (PCFailedReason)err; 483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 496baea169SHong Zhang } 506baea169SHong Zhang 519566063dSJacob Faibussowitsch PetscCall(MatCholeskyFactorNumeric(((PC_Factor *)icc)->fact, pc->pmat, &((PC_Factor *)icc)->info)); 529566063dSJacob Faibussowitsch PetscCall(MatFactorGetError(((PC_Factor *)icc)->fact, &err)); 5300e125f8SBarry Smith if (err) { /* FactorNumeric() fails */ 5400e125f8SBarry Smith pc->failedreason = (PCFailedReason)err; 556baea169SHong Zhang } 5600c67f3bSHong Zhang 579566063dSJacob Faibussowitsch PetscCall(PCFactorGetMatSolverType(pc, &stype)); 5800c67f3bSHong Zhang if (!stype) { 59ea799195SBarry Smith MatSolverType solverpackage; 609566063dSJacob Faibussowitsch PetscCall(MatFactorGetSolverType(((PC_Factor *)icc)->fact, &solverpackage)); 619566063dSJacob Faibussowitsch PetscCall(PCFactorSetMatSolverType(pc, solverpackage)); 6200c67f3bSHong Zhang } 633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 649b54502bSHong Zhang } 659b54502bSHong Zhang 66d71ae5a4SJacob Faibussowitsch static PetscErrorCode PCReset_ICC(PC pc) 67d71ae5a4SJacob Faibussowitsch { 68574deadeSBarry Smith PC_ICC *icc = (PC_ICC *)pc->data; 69574deadeSBarry Smith 70574deadeSBarry Smith PetscFunctionBegin; 719566063dSJacob Faibussowitsch PetscCall(MatDestroy(&((PC_Factor *)icc)->fact)); 723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 73574deadeSBarry Smith } 74574deadeSBarry Smith 75d71ae5a4SJacob Faibussowitsch static PetscErrorCode PCDestroy_ICC(PC pc) 76d71ae5a4SJacob Faibussowitsch { 779b54502bSHong Zhang PC_ICC *icc = (PC_ICC *)pc->data; 789b54502bSHong Zhang 799b54502bSHong Zhang PetscFunctionBegin; 809566063dSJacob Faibussowitsch PetscCall(PCReset_ICC(pc)); 819566063dSJacob Faibussowitsch PetscCall(PetscFree(((PC_Factor *)icc)->ordering)); 829566063dSJacob Faibussowitsch PetscCall(PetscFree(((PC_Factor *)icc)->solvertype)); 832e956fe4SStefano Zampini PetscCall(PCFactorClearComposedFunctions(pc)); 849566063dSJacob Faibussowitsch PetscCall(PetscFree(pc->data)); 853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 869b54502bSHong Zhang } 879b54502bSHong Zhang 88d71ae5a4SJacob Faibussowitsch static PetscErrorCode PCApply_ICC(PC pc, Vec x, Vec y) 89d71ae5a4SJacob Faibussowitsch { 909b54502bSHong Zhang PC_ICC *icc = (PC_ICC *)pc->data; 919b54502bSHong Zhang 929b54502bSHong Zhang PetscFunctionBegin; 939566063dSJacob Faibussowitsch PetscCall(MatSolve(((PC_Factor *)icc)->fact, x, y)); 943ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 959b54502bSHong Zhang } 969b54502bSHong Zhang 97d71ae5a4SJacob Faibussowitsch static PetscErrorCode PCMatApply_ICC(PC pc, Mat X, Mat Y) 98d71ae5a4SJacob Faibussowitsch { 997b6e2003SPierre Jolivet PC_ICC *icc = (PC_ICC *)pc->data; 1007b6e2003SPierre Jolivet 1017b6e2003SPierre Jolivet PetscFunctionBegin; 1029566063dSJacob Faibussowitsch PetscCall(MatMatSolve(((PC_Factor *)icc)->fact, X, Y)); 1033ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1047b6e2003SPierre Jolivet } 1057b6e2003SPierre Jolivet 106d71ae5a4SJacob Faibussowitsch static PetscErrorCode PCApplySymmetricLeft_ICC(PC pc, Vec x, Vec y) 107d71ae5a4SJacob Faibussowitsch { 1089b54502bSHong Zhang PC_ICC *icc = (PC_ICC *)pc->data; 1099b54502bSHong Zhang 1109b54502bSHong Zhang PetscFunctionBegin; 1119566063dSJacob Faibussowitsch PetscCall(MatForwardSolve(((PC_Factor *)icc)->fact, x, y)); 1123ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1139b54502bSHong Zhang } 1149b54502bSHong Zhang 115d71ae5a4SJacob Faibussowitsch static PetscErrorCode PCApplySymmetricRight_ICC(PC pc, Vec x, Vec y) 116d71ae5a4SJacob Faibussowitsch { 1179b54502bSHong Zhang PC_ICC *icc = (PC_ICC *)pc->data; 1189b54502bSHong Zhang 1199b54502bSHong Zhang PetscFunctionBegin; 1209566063dSJacob Faibussowitsch PetscCall(MatBackwardSolve(((PC_Factor *)icc)->fact, x, y)); 1213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1229b54502bSHong Zhang } 1239b54502bSHong Zhang 124d71ae5a4SJacob Faibussowitsch static PetscErrorCode PCSetFromOptions_ICC(PC pc, PetscOptionItems *PetscOptionsObject) 125d71ae5a4SJacob Faibussowitsch { 1269b54502bSHong Zhang PC_ICC *icc = (PC_ICC *)pc->data; 127ace3abfcSBarry Smith PetscBool flg; 1282fa5cd67SKarl Rupp /* PetscReal dt[3];*/ 1299b54502bSHong Zhang 1309b54502bSHong Zhang PetscFunctionBegin; 131d0609cedSBarry Smith PetscOptionsHeadBegin(PetscOptionsObject, "ICC Options"); 132dbbe0bcdSBarry Smith PetscCall(PCSetFromOptions_Factor(pc, PetscOptionsObject)); 1339b54502bSHong Zhang 1349566063dSJacob Faibussowitsch PetscCall(PetscOptionsReal("-pc_factor_levels", "levels of fill", "PCFactorSetLevels", ((PC_Factor *)icc)->info.levels, &((PC_Factor *)icc)->info.levels, &flg)); 1355a586d82SBarry Smith /*dt[0] = ((PC_Factor*)icc)->info.dt; 1364c9036c7SBarry Smith dt[1] = ((PC_Factor*)icc)->info.dtcol; 1374c9036c7SBarry Smith dt[2] = ((PC_Factor*)icc)->info.dtcount; 13878fc6b22SHong Zhang PetscInt dtmax = 3; 1399566063dSJacob Faibussowitsch PetscCall(PetscOptionsRealArray("-pc_factor_drop_tolerance","<dt,dtcol,maxrowcount>","PCFactorSetDropTolerance",dt,&dtmax,&flg)); 1404c9036c7SBarry Smith if (flg) { 1419566063dSJacob Faibussowitsch PetscCall(PCFactorSetDropTolerance(pc,dt[0],dt[1],(PetscInt)dt[2])); 1424c9036c7SBarry Smith } 14378fc6b22SHong Zhang */ 144d0609cedSBarry Smith PetscOptionsHeadEnd(); 1453ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1469b54502bSHong Zhang } 1479b54502bSHong Zhang 1487087cfbeSBarry Smith extern PetscErrorCode PCFactorSetDropTolerance_ILU(PC, PetscReal, PetscReal, PetscInt); 1494c9036c7SBarry Smith 1509b54502bSHong Zhang /*MC 1519b54502bSHong Zhang PCICC - Incomplete Cholesky factorization preconditioners. 1529b54502bSHong Zhang 1539b54502bSHong Zhang Options Database Keys: 1542401956bSBarry Smith + -pc_factor_levels <k> - number of levels of fill for ICC(k) 1552401956bSBarry Smith . -pc_factor_in_place - only for ICC(0) with natural ordering, reuses the space of the matrix for 1569b54502bSHong Zhang its factorization (overwrites original matrix) 15755ba2a51SBarry Smith . -pc_factor_fill <nfill> - expected amount of fill in factored matrix compared to original matrix, nfill > 1 158145b9266SHong Zhang - -pc_factor_mat_ordering_type <natural,nd,1wd,rcm,qmd> - set the row/column ordering of the factored matrix 1599b54502bSHong Zhang 1609b54502bSHong Zhang Level: beginner 1619b54502bSHong Zhang 16295452b02SPatrick Sanan Notes: 16395452b02SPatrick Sanan Only implemented for some matrix formats. Not implemented in parallel. 1649b54502bSHong Zhang 165f1580f4eSBarry Smith For `MATSEQBAIJ` matrices this implements a point block ICC. 166f1580f4eSBarry Smith 167f1580f4eSBarry Smith By default, the Manteuffel is applied (for matrices with block size 1). Call `PCFactorSetShiftType`(pc,`MAT_SHIFT_POSITIVE_DEFINITE`); 168f1580f4eSBarry Smith to turn off the shift. 1699b54502bSHong Zhang 1709b54502bSHong Zhang The Manteuffel shift is only implemented for matrices with block size 1 1719b54502bSHong Zhang 172c582cd25SBarry Smith References: 173606c0280SSatish Balay . * - TONY F. CHAN AND HENK A. VAN DER VORST, Review article: APPROXIMATE AND INCOMPLETE FACTORIZATIONS, 17496a0c994SBarry Smith Chapter in Parallel Numerical Algorithms, edited by D. Keyes, A. Semah, V. Venkatakrishnan, ICASE/LaRC Interdisciplinary Series in 17596a0c994SBarry Smith Science and Engineering, Kluwer. 176c582cd25SBarry Smith 177f1580f4eSBarry Smith .seealso: `PCCreate()`, `PCSetType()`, `PCType`, `PC`, `PCSOR`, `MatOrderingType`, `PCILU`, `PCLU`, `PCCHOLESKY`, 178db781477SPatrick Sanan `PCFactorSetZeroPivot()`, `PCFactorSetShiftType()`, `PCFactorSetShiftAmount()`, 179db781477SPatrick Sanan `PCFactorSetFill()`, `PCFactorSetMatOrderingType()`, `PCFactorSetReuseOrdering()`, 180db781477SPatrick Sanan `PCFactorSetLevels()` 1819b54502bSHong Zhang M*/ 1829b54502bSHong Zhang 183d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PCCreate_ICC(PC pc) 184d71ae5a4SJacob Faibussowitsch { 1859b54502bSHong Zhang PC_ICC *icc; 1869b54502bSHong Zhang 1879b54502bSHong Zhang PetscFunctionBegin; 1884dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&icc)); 1893d1c1ea0SBarry Smith pc->data = (void *)icc; 1909566063dSJacob Faibussowitsch PetscCall(PCFactorInitialize(pc, MAT_FACTOR_ICC)); 1912fa5cd67SKarl Rupp 192075768bcSBarry Smith ((PC_Factor *)icc)->info.fill = 1.0; 193075768bcSBarry Smith ((PC_Factor *)icc)->info.dtcol = PETSC_DEFAULT; 194f4db908eSBarry Smith ((PC_Factor *)icc)->info.shifttype = (PetscReal)MAT_SHIFT_POSITIVE_DEFINITE; 1959b54502bSHong Zhang 1969b54502bSHong Zhang pc->ops->apply = PCApply_ICC; 1977b6e2003SPierre Jolivet pc->ops->matapply = PCMatApply_ICC; 198d674540eSJed Brown pc->ops->applytranspose = PCApply_ICC; 1994cccfbddSHong Zhang pc->ops->setup = PCSetUp_ICC; 200574deadeSBarry Smith pc->ops->reset = PCReset_ICC; 2019b54502bSHong Zhang pc->ops->destroy = PCDestroy_ICC; 2029b54502bSHong Zhang pc->ops->setfromoptions = PCSetFromOptions_ICC; 20392e08861SBarry Smith pc->ops->view = PCView_Factor; 2049b54502bSHong Zhang pc->ops->applysymmetricleft = PCApplySymmetricLeft_ICC; 2059b54502bSHong Zhang pc->ops->applysymmetricright = PCApplySymmetricRight_ICC; 2063ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2079b54502bSHong Zhang } 208