1dba47a55SKris Buschelman 2c6db04a5SJed Brown #include <../src/ksp/pc/impls/factor/icc/icc.h> /*I "petscpc.h" I*/ 39b54502bSHong Zhang 44cccfbddSHong Zhang static PetscErrorCode PCSetUp_ICC(PC pc) 59b54502bSHong Zhang { 69b54502bSHong Zhang PC_ICC *icc = (PC_ICC*)pc->data; 72c7c0729SBarry Smith IS perm = NULL,cperm = NULL; 8f3a39becSBarry Smith MatInfo info; 9ea799195SBarry Smith MatSolverType stype; 1000e125f8SBarry Smith MatFactorError err; 114ac6704cSBarry Smith PetscBool canuseordering; 12f023e1d5SPierre Jolivet const char *prefix; 139b54502bSHong Zhang 149b54502bSHong Zhang PetscFunctionBegin; 15a7f29c02SPierre Jolivet if (!((PetscObject)pc->pmat)->prefix) { 16f023e1d5SPierre Jolivet PetscCall(PCGetOptionsPrefix(pc,&prefix)); 17f023e1d5SPierre Jolivet PetscCall(MatSetOptionsPrefix(pc->pmat,prefix)); 18a7f29c02SPierre Jolivet } 19c6e4fdc6SHong Zhang pc->failedreason = PC_NOERROR; 209b54502bSHong Zhang 219566063dSJacob Faibussowitsch PetscCall(MatSetErrorIfFailure(pc->pmat,pc->erroriffailure)); 229b54502bSHong Zhang if (!pc->setupcalled) { 23d09a07f4SBarry Smith if (!((PC_Factor*)icc)->fact) { 249566063dSJacob Faibussowitsch PetscCall(MatGetFactor(pc->pmat,((PC_Factor*)icc)->solvertype,MAT_FACTOR_ICC,&((PC_Factor*)icc)->fact)); 254ac6704cSBarry Smith } 269566063dSJacob Faibussowitsch PetscCall(MatFactorGetCanUseOrdering(((PC_Factor*)icc)->fact,&canuseordering)); 27f73b0415SBarry Smith if (canuseordering) { 289566063dSJacob Faibussowitsch PetscCall(PCFactorSetDefaultOrdering_Factor(pc)); 299566063dSJacob Faibussowitsch PetscCall(MatGetOrdering(pc->pmat, ((PC_Factor*)icc)->ordering,&perm,&cperm)); 302c7c0729SBarry Smith } 319566063dSJacob Faibussowitsch PetscCall(MatICCFactorSymbolic(((PC_Factor*)icc)->fact,pc->pmat,perm,&((PC_Factor*)icc)->info)); 329b54502bSHong Zhang } else if (pc->flag != SAME_NONZERO_PATTERN) { 33f73b0415SBarry Smith PetscBool canuseordering; 349566063dSJacob Faibussowitsch PetscCall(MatDestroy(&((PC_Factor*)icc)->fact)); 359566063dSJacob Faibussowitsch PetscCall(MatGetFactor(pc->pmat,((PC_Factor*)icc)->solvertype,MAT_FACTOR_ICC,&((PC_Factor*)icc)->fact)); 369566063dSJacob Faibussowitsch PetscCall(MatFactorGetCanUseOrdering(((PC_Factor*)icc)->fact,&canuseordering)); 37f73b0415SBarry Smith if (canuseordering) { 389566063dSJacob Faibussowitsch PetscCall(PCFactorSetDefaultOrdering_Factor(pc)); 399566063dSJacob Faibussowitsch PetscCall(MatGetOrdering(pc->pmat, ((PC_Factor*)icc)->ordering,&perm,&cperm)); 402c7c0729SBarry Smith } 419566063dSJacob Faibussowitsch PetscCall(MatICCFactorSymbolic(((PC_Factor*)icc)->fact,pc->pmat,perm,&((PC_Factor*)icc)->info)); 429b54502bSHong Zhang } 439566063dSJacob Faibussowitsch PetscCall(MatGetInfo(((PC_Factor*)icc)->fact,MAT_LOCAL,&info)); 443d1c1ea0SBarry Smith icc->hdr.actualfill = info.fill_ratio_needed; 45f3a39becSBarry Smith 469566063dSJacob Faibussowitsch PetscCall(ISDestroy(&cperm)); 479566063dSJacob Faibussowitsch PetscCall(ISDestroy(&perm)); 486baea169SHong Zhang 499566063dSJacob Faibussowitsch PetscCall(MatFactorGetError(((PC_Factor*)icc)->fact,&err)); 5000e125f8SBarry Smith if (err) { /* FactorSymbolic() fails */ 5100e125f8SBarry Smith pc->failedreason = (PCFailedReason)err; 526baea169SHong Zhang PetscFunctionReturn(0); 536baea169SHong Zhang } 546baea169SHong Zhang 559566063dSJacob Faibussowitsch PetscCall(MatCholeskyFactorNumeric(((PC_Factor*)icc)->fact,pc->pmat,&((PC_Factor*)icc)->info)); 569566063dSJacob Faibussowitsch PetscCall(MatFactorGetError(((PC_Factor*)icc)->fact,&err)); 5700e125f8SBarry Smith if (err) { /* FactorNumeric() fails */ 5800e125f8SBarry Smith pc->failedreason = (PCFailedReason)err; 596baea169SHong Zhang } 6000c67f3bSHong Zhang 619566063dSJacob Faibussowitsch PetscCall(PCFactorGetMatSolverType(pc,&stype)); 6200c67f3bSHong Zhang if (!stype) { 63ea799195SBarry Smith MatSolverType solverpackage; 649566063dSJacob Faibussowitsch PetscCall(MatFactorGetSolverType(((PC_Factor*)icc)->fact,&solverpackage)); 659566063dSJacob Faibussowitsch PetscCall(PCFactorSetMatSolverType(pc,solverpackage)); 6600c67f3bSHong Zhang } 679b54502bSHong Zhang PetscFunctionReturn(0); 689b54502bSHong Zhang } 699b54502bSHong Zhang 70574deadeSBarry Smith static PetscErrorCode PCReset_ICC(PC pc) 71574deadeSBarry Smith { 72574deadeSBarry Smith PC_ICC *icc = (PC_ICC*)pc->data; 73574deadeSBarry Smith 74574deadeSBarry Smith PetscFunctionBegin; 759566063dSJacob Faibussowitsch PetscCall(MatDestroy(&((PC_Factor*)icc)->fact)); 76574deadeSBarry Smith PetscFunctionReturn(0); 77574deadeSBarry Smith } 78574deadeSBarry Smith 799b54502bSHong Zhang static PetscErrorCode PCDestroy_ICC(PC pc) 809b54502bSHong Zhang { 819b54502bSHong Zhang PC_ICC *icc = (PC_ICC*)pc->data; 829b54502bSHong Zhang 839b54502bSHong Zhang PetscFunctionBegin; 849566063dSJacob Faibussowitsch PetscCall(PCReset_ICC(pc)); 859566063dSJacob Faibussowitsch PetscCall(PetscFree(((PC_Factor*)icc)->ordering)); 869566063dSJacob Faibussowitsch PetscCall(PetscFree(((PC_Factor*)icc)->solvertype)); 87*2e956fe4SStefano Zampini PetscCall(PCFactorClearComposedFunctions(pc)); 889566063dSJacob Faibussowitsch PetscCall(PetscFree(pc->data)); 899b54502bSHong Zhang PetscFunctionReturn(0); 909b54502bSHong Zhang } 919b54502bSHong Zhang 929b54502bSHong Zhang static PetscErrorCode PCApply_ICC(PC pc,Vec x,Vec y) 939b54502bSHong Zhang { 949b54502bSHong Zhang PC_ICC *icc = (PC_ICC*)pc->data; 959b54502bSHong Zhang 969b54502bSHong Zhang PetscFunctionBegin; 979566063dSJacob Faibussowitsch PetscCall(MatSolve(((PC_Factor*)icc)->fact,x,y)); 989b54502bSHong Zhang PetscFunctionReturn(0); 999b54502bSHong Zhang } 1009b54502bSHong Zhang 1017b6e2003SPierre Jolivet static PetscErrorCode PCMatApply_ICC(PC pc,Mat X,Mat Y) 1027b6e2003SPierre Jolivet { 1037b6e2003SPierre Jolivet PC_ICC *icc = (PC_ICC*)pc->data; 1047b6e2003SPierre Jolivet 1057b6e2003SPierre Jolivet PetscFunctionBegin; 1069566063dSJacob Faibussowitsch PetscCall(MatMatSolve(((PC_Factor*)icc)->fact,X,Y)); 1077b6e2003SPierre Jolivet PetscFunctionReturn(0); 1087b6e2003SPierre Jolivet } 1097b6e2003SPierre Jolivet 1109b54502bSHong Zhang static PetscErrorCode PCApplySymmetricLeft_ICC(PC pc,Vec x,Vec y) 1119b54502bSHong Zhang { 1129b54502bSHong Zhang PC_ICC *icc = (PC_ICC*)pc->data; 1139b54502bSHong Zhang 1149b54502bSHong Zhang PetscFunctionBegin; 1159566063dSJacob Faibussowitsch PetscCall(MatForwardSolve(((PC_Factor*)icc)->fact,x,y)); 1169b54502bSHong Zhang PetscFunctionReturn(0); 1179b54502bSHong Zhang } 1189b54502bSHong Zhang 1199b54502bSHong Zhang static PetscErrorCode PCApplySymmetricRight_ICC(PC pc,Vec x,Vec y) 1209b54502bSHong Zhang { 1219b54502bSHong Zhang PC_ICC *icc = (PC_ICC*)pc->data; 1229b54502bSHong Zhang 1239b54502bSHong Zhang PetscFunctionBegin; 1249566063dSJacob Faibussowitsch PetscCall(MatBackwardSolve(((PC_Factor*)icc)->fact,x,y)); 1259b54502bSHong Zhang PetscFunctionReturn(0); 1269b54502bSHong Zhang } 1279b54502bSHong Zhang 1284416b707SBarry Smith static PetscErrorCode PCSetFromOptions_ICC(PetscOptionItems *PetscOptionsObject,PC pc) 1299b54502bSHong Zhang { 1309b54502bSHong Zhang PC_ICC *icc = (PC_ICC*)pc->data; 131ace3abfcSBarry Smith PetscBool flg; 1322fa5cd67SKarl Rupp /* PetscReal dt[3];*/ 1339b54502bSHong Zhang 1349b54502bSHong Zhang PetscFunctionBegin; 135d0609cedSBarry Smith PetscOptionsHeadBegin(PetscOptionsObject,"ICC Options"); 1369566063dSJacob Faibussowitsch PetscCall(PCSetFromOptions_Factor(PetscOptionsObject,pc)); 1379b54502bSHong Zhang 1389566063dSJacob Faibussowitsch PetscCall(PetscOptionsReal("-pc_factor_levels","levels of fill","PCFactorSetLevels",((PC_Factor*)icc)->info.levels,&((PC_Factor*)icc)->info.levels,&flg)); 1395a586d82SBarry Smith /*dt[0] = ((PC_Factor*)icc)->info.dt; 1404c9036c7SBarry Smith dt[1] = ((PC_Factor*)icc)->info.dtcol; 1414c9036c7SBarry Smith dt[2] = ((PC_Factor*)icc)->info.dtcount; 14278fc6b22SHong Zhang PetscInt dtmax = 3; 1439566063dSJacob Faibussowitsch PetscCall(PetscOptionsRealArray("-pc_factor_drop_tolerance","<dt,dtcol,maxrowcount>","PCFactorSetDropTolerance",dt,&dtmax,&flg)); 1444c9036c7SBarry Smith if (flg) { 1459566063dSJacob Faibussowitsch PetscCall(PCFactorSetDropTolerance(pc,dt[0],dt[1],(PetscInt)dt[2])); 1464c9036c7SBarry Smith } 14778fc6b22SHong Zhang */ 148d0609cedSBarry Smith PetscOptionsHeadEnd(); 1499b54502bSHong Zhang PetscFunctionReturn(0); 1509b54502bSHong Zhang } 1519b54502bSHong Zhang 1527087cfbeSBarry Smith extern PetscErrorCode PCFactorSetDropTolerance_ILU(PC,PetscReal,PetscReal,PetscInt); 1534c9036c7SBarry Smith 1549b54502bSHong Zhang /*MC 1559b54502bSHong Zhang PCICC - Incomplete Cholesky factorization preconditioners. 1569b54502bSHong Zhang 1579b54502bSHong Zhang Options Database Keys: 1582401956bSBarry Smith + -pc_factor_levels <k> - number of levels of fill for ICC(k) 1592401956bSBarry Smith . -pc_factor_in_place - only for ICC(0) with natural ordering, reuses the space of the matrix for 1609b54502bSHong Zhang its factorization (overwrites original matrix) 16155ba2a51SBarry Smith . -pc_factor_fill <nfill> - expected amount of fill in factored matrix compared to original matrix, nfill > 1 162145b9266SHong Zhang - -pc_factor_mat_ordering_type <natural,nd,1wd,rcm,qmd> - set the row/column ordering of the factored matrix 1639b54502bSHong Zhang 1649b54502bSHong Zhang Level: beginner 1659b54502bSHong Zhang 16695452b02SPatrick Sanan Notes: 16795452b02SPatrick Sanan Only implemented for some matrix formats. Not implemented in parallel. 1689b54502bSHong Zhang 1699b54502bSHong Zhang For BAIJ matrices this implements a point block ICC. 1709b54502bSHong Zhang 1719b54502bSHong Zhang The Manteuffel shift is only implemented for matrices with block size 1 1729b54502bSHong Zhang 17314d2772eSHong Zhang By default, the Manteuffel is applied (for matrices with block size 1). Call PCFactorSetShiftType(pc,MAT_SHIFT_POSITIVE_DEFINITE); 1749b54502bSHong Zhang to turn off the shift. 1759b54502bSHong Zhang 176c582cd25SBarry Smith References: 177606c0280SSatish Balay . * - TONY F. CHAN AND HENK A. VAN DER VORST, Review article: APPROXIMATE AND INCOMPLETE FACTORIZATIONS, 17896a0c994SBarry Smith Chapter in Parallel Numerical Algorithms, edited by D. Keyes, A. Semah, V. Venkatakrishnan, ICASE/LaRC Interdisciplinary Series in 17996a0c994SBarry Smith Science and Engineering, Kluwer. 180c582cd25SBarry Smith 181db781477SPatrick Sanan .seealso: `PCCreate()`, `PCSetType()`, `PCType`, `PC`, `PCSOR`, `MatOrderingType`, 182db781477SPatrick Sanan `PCFactorSetZeroPivot()`, `PCFactorSetShiftType()`, `PCFactorSetShiftAmount()`, 183db781477SPatrick Sanan `PCFactorSetFill()`, `PCFactorSetMatOrderingType()`, `PCFactorSetReuseOrdering()`, 184db781477SPatrick Sanan `PCFactorSetLevels()` 1859b54502bSHong Zhang 1869b54502bSHong Zhang M*/ 1879b54502bSHong Zhang 1888cc058d9SJed Brown PETSC_EXTERN PetscErrorCode PCCreate_ICC(PC pc) 1899b54502bSHong Zhang { 1909b54502bSHong Zhang PC_ICC *icc; 1919b54502bSHong Zhang 1929b54502bSHong Zhang PetscFunctionBegin; 1939566063dSJacob Faibussowitsch PetscCall(PetscNewLog(pc,&icc)); 1943d1c1ea0SBarry Smith pc->data = (void*)icc; 1959566063dSJacob Faibussowitsch PetscCall(PCFactorInitialize(pc, MAT_FACTOR_ICC)); 1962fa5cd67SKarl Rupp 197075768bcSBarry Smith ((PC_Factor*)icc)->info.fill = 1.0; 198075768bcSBarry Smith ((PC_Factor*)icc)->info.dtcol = PETSC_DEFAULT; 199f4db908eSBarry Smith ((PC_Factor*)icc)->info.shifttype = (PetscReal) MAT_SHIFT_POSITIVE_DEFINITE; 2009b54502bSHong Zhang 2019b54502bSHong Zhang pc->ops->apply = PCApply_ICC; 2027b6e2003SPierre Jolivet pc->ops->matapply = PCMatApply_ICC; 203d674540eSJed Brown pc->ops->applytranspose = PCApply_ICC; 2044cccfbddSHong Zhang pc->ops->setup = PCSetUp_ICC; 205574deadeSBarry Smith pc->ops->reset = PCReset_ICC; 2069b54502bSHong Zhang pc->ops->destroy = PCDestroy_ICC; 2079b54502bSHong Zhang pc->ops->setfromoptions = PCSetFromOptions_ICC; 20892e08861SBarry Smith pc->ops->view = PCView_Factor; 2099b54502bSHong Zhang pc->ops->applysymmetricleft = PCApplySymmetricLeft_ICC; 2109b54502bSHong Zhang pc->ops->applysymmetricright = PCApplySymmetricRight_ICC; 2119b54502bSHong Zhang PetscFunctionReturn(0); 2129b54502bSHong Zhang } 213