1dba47a55SKris Buschelman #define PETSCKSP_DLL 2dba47a55SKris Buschelman 39b54502bSHong Zhang /* 49b54502bSHong Zhang Defines a ILU factorization preconditioner for any Mat implementation 59b54502bSHong Zhang */ 6*7c4f633dSBarry Smith #include "../src/ksp/pc/impls/factor/ilu/ilu.h" /*I "petscpc.h" I*/ 79b54502bSHong Zhang 89b54502bSHong Zhang /* ------------------------------------------------------------------------------------------*/ 9afaefe49SHong Zhang EXTERN_C_BEGIN 10afaefe49SHong Zhang #undef __FUNCT__ 112401956bSBarry Smith #define __FUNCT__ "PCFactorSetReuseFill_ILU" 122401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorSetReuseFill_ILU(PC pc,PetscTruth flag) 132401956bSBarry Smith { 14075768bcSBarry Smith PC_ILU *lu = (PC_ILU*)pc->data; 152401956bSBarry Smith 162401956bSBarry Smith PetscFunctionBegin; 172401956bSBarry Smith lu->reusefill = flag; 182401956bSBarry Smith PetscFunctionReturn(0); 192401956bSBarry Smith } 202401956bSBarry Smith EXTERN_C_END 212401956bSBarry Smith 222401956bSBarry Smith EXTERN_C_BEGIN 232401956bSBarry Smith #undef __FUNCT__ 242401956bSBarry Smith #define __FUNCT__ "PCFactorReorderForNonzeroDiagonal_ILU" 252401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorReorderForNonzeroDiagonal_ILU(PC pc,PetscReal z) 269b54502bSHong Zhang { 279b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 289b54502bSHong Zhang 299b54502bSHong Zhang PetscFunctionBegin; 309b54502bSHong Zhang ilu->nonzerosalongdiagonal = PETSC_TRUE; 319b54502bSHong Zhang if (z == PETSC_DECIDE) { 329b54502bSHong Zhang ilu->nonzerosalongdiagonaltol = 1.e-10; 339b54502bSHong Zhang } else { 349b54502bSHong Zhang ilu->nonzerosalongdiagonaltol = z; 359b54502bSHong Zhang } 369b54502bSHong Zhang PetscFunctionReturn(0); 379b54502bSHong Zhang } 389b54502bSHong Zhang EXTERN_C_END 399b54502bSHong Zhang 409b54502bSHong Zhang #undef __FUNCT__ 419b54502bSHong Zhang #define __FUNCT__ "PCDestroy_ILU_Internal" 429b54502bSHong Zhang PetscErrorCode PCDestroy_ILU_Internal(PC pc) 439b54502bSHong Zhang { 449b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 459b54502bSHong Zhang PetscErrorCode ierr; 469b54502bSHong Zhang 479b54502bSHong Zhang PetscFunctionBegin; 48075768bcSBarry Smith if (!ilu->inplace && ((PC_Factor*)ilu)->fact) {ierr = MatDestroy(((PC_Factor*)ilu)->fact);CHKERRQ(ierr);} 499b54502bSHong Zhang if (ilu->row && ilu->col && ilu->row != ilu->col) {ierr = ISDestroy(ilu->row);CHKERRQ(ierr);} 509b54502bSHong Zhang if (ilu->col) {ierr = ISDestroy(ilu->col);CHKERRQ(ierr);} 519b54502bSHong Zhang PetscFunctionReturn(0); 529b54502bSHong Zhang } 539b54502bSHong Zhang 549b54502bSHong Zhang EXTERN_C_BEGIN 559b54502bSHong Zhang #undef __FUNCT__ 562401956bSBarry Smith #define __FUNCT__ "PCFactorSetUseDropTolerance_ILU" 572401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorSetUseDropTolerance_ILU(PC pc,PetscReal dt,PetscReal dtcol,PetscInt dtcount) 589b54502bSHong Zhang { 59075768bcSBarry Smith PC_ILU *ilu = (PC_ILU*)pc->data; 609b54502bSHong Zhang PetscErrorCode ierr; 619b54502bSHong Zhang 629b54502bSHong Zhang PetscFunctionBegin; 63075768bcSBarry Smith if (pc->setupcalled && (!ilu->usedt || ((PC_Factor*)ilu)->info.dt != dt || ((PC_Factor*)ilu)->info.dtcol != dtcol || ((PC_Factor*)ilu)->info.dtcount != dtcount)) { 649b54502bSHong Zhang pc->setupcalled = 0; 659b54502bSHong Zhang ierr = PCDestroy_ILU_Internal(pc);CHKERRQ(ierr); 669b54502bSHong Zhang } 679b54502bSHong Zhang ilu->usedt = PETSC_TRUE; 68075768bcSBarry Smith ((PC_Factor*)ilu)->info.dt = dt; 69075768bcSBarry Smith ((PC_Factor*)ilu)->info.dtcol = dtcol; 70075768bcSBarry Smith ((PC_Factor*)ilu)->info.dtcount = dtcount; 71075768bcSBarry Smith ((PC_Factor*)ilu)->info.fill = PETSC_DEFAULT; 729b54502bSHong Zhang PetscFunctionReturn(0); 739b54502bSHong Zhang } 749b54502bSHong Zhang EXTERN_C_END 759b54502bSHong Zhang 769b54502bSHong Zhang EXTERN_C_BEGIN 779b54502bSHong Zhang #undef __FUNCT__ 782401956bSBarry Smith #define __FUNCT__ "PCFactorSetReuseOrdering_ILU" 792401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorSetReuseOrdering_ILU(PC pc,PetscTruth flag) 809b54502bSHong Zhang { 81075768bcSBarry Smith PC_ILU *ilu = (PC_ILU*)pc->data; 829b54502bSHong Zhang 839b54502bSHong Zhang PetscFunctionBegin; 849b54502bSHong Zhang ilu->reuseordering = flag; 859b54502bSHong Zhang PetscFunctionReturn(0); 869b54502bSHong Zhang } 879b54502bSHong Zhang EXTERN_C_END 889b54502bSHong Zhang 899b54502bSHong Zhang EXTERN_C_BEGIN 909b54502bSHong Zhang #undef __FUNCT__ 912401956bSBarry Smith #define __FUNCT__ "PCFactorSetUseInPlace_ILU" 922401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorSetUseInPlace_ILU(PC pc) 939b54502bSHong Zhang { 94075768bcSBarry Smith PC_ILU *dir = (PC_ILU*)pc->data; 959b54502bSHong Zhang 969b54502bSHong Zhang PetscFunctionBegin; 979b54502bSHong Zhang dir->inplace = PETSC_TRUE; 989b54502bSHong Zhang PetscFunctionReturn(0); 999b54502bSHong Zhang } 1009b54502bSHong Zhang EXTERN_C_END 1019b54502bSHong Zhang 1029b54502bSHong Zhang #undef __FUNCT__ 1039b54502bSHong Zhang #define __FUNCT__ "PCSetFromOptions_ILU" 1049b54502bSHong Zhang static PetscErrorCode PCSetFromOptions_ILU(PC pc) 1059b54502bSHong Zhang { 1069b54502bSHong Zhang PetscErrorCode ierr; 1079b54502bSHong Zhang PetscInt dtmax = 3,itmp; 1089b54502bSHong Zhang PetscTruth flg,set; 1099b54502bSHong Zhang PetscReal dt[3]; 1109b54502bSHong Zhang char tname[256]; 1119b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 1129b54502bSHong Zhang PetscFList ordlist; 1139b54502bSHong Zhang PetscReal tol; 1149b54502bSHong Zhang 1159b54502bSHong Zhang PetscFunctionBegin; 1169b54502bSHong Zhang ierr = MatOrderingRegisterAll(PETSC_NULL);CHKERRQ(ierr); 1179b54502bSHong Zhang ierr = PetscOptionsHead("ILU Options");CHKERRQ(ierr); 118075768bcSBarry Smith ierr = PetscOptionsInt("-pc_factor_levels","levels of fill","PCFactorSetLevels",(PetscInt)((PC_Factor*)ilu)->info.levels,&itmp,&flg);CHKERRQ(ierr); 119075768bcSBarry Smith if (flg) ((PC_Factor*)ilu)->info.levels = itmp; 120edbb7feeSSatish Balay ierr = PetscOptionsName("-pc_factor_in_place","do factorization in place","PCFactorSetUseInPlace",&flg);CHKERRQ(ierr); 121edbb7feeSSatish Balay if (flg) ilu->inplace = PETSC_TRUE; 1222401956bSBarry Smith ierr = PetscOptionsName("-pc_factor_diagonal_fill","Allow fill into empty diagonal entry","PCFactorSetAllowDiagonalFill",&flg);CHKERRQ(ierr); 123075768bcSBarry Smith ((PC_Factor*)ilu)->info.diagonal_fill = (double) flg; 124edbb7feeSSatish Balay ierr = PetscOptionsName("-pc_factor_reuse_fill","Reuse fill ratio from previous factorization","PCFactorSetReuseFill",&flg);CHKERRQ(ierr); 125edbb7feeSSatish Balay if (flg) ilu->reusefill = PETSC_TRUE; 126edbb7feeSSatish Balay ierr = PetscOptionsName("-pc_factor_reuse_ordering","Reuse previous reordering","PCFactorSetReuseOrdering",&flg);CHKERRQ(ierr); 127edbb7feeSSatish Balay if (flg) ilu->reuseordering = PETSC_TRUE; 1289f95998fSHong Zhang ierr = PetscOptionsName("-pc_factor_shift_nonzero","Shift added to diagonal","PCFactorSetShiftNonzero",&flg);CHKERRQ(ierr); 1299b54502bSHong Zhang if (flg) { 130afaefe49SHong Zhang ierr = PCFactorSetShiftNonzero(pc,(PetscReal)PETSC_DECIDE);CHKERRQ(ierr); 1319b54502bSHong Zhang } 132075768bcSBarry Smith ierr = PetscOptionsReal("-pc_factor_shift_nonzero","Shift added to diagonal","PCFactorSetShiftNonzero",((PC_Factor*)ilu)->info.shiftnz,&((PC_Factor*)ilu)->info.shiftnz,0);CHKERRQ(ierr); 133075768bcSBarry Smith flg = (((PC_Factor*)ilu)->info.shiftpd > 0.0) ? PETSC_TRUE : PETSC_FALSE; 13462bba022SBarry Smith ierr = PetscOptionsTruth("-pc_factor_shift_positive_definite","Manteuffel shift applied to diagonal","PCFactorSetShiftPd",flg,&flg,PETSC_NULL);CHKERRQ(ierr); 13562bba022SBarry Smith ierr = PCFactorSetShiftPd(pc,flg);CHKERRQ(ierr); 136075768bcSBarry Smith ierr = PetscOptionsReal("-pc_factor_zeropivot","Pivot is considered zero if less than","PCFactorSetZeroPivot",((PC_Factor*)ilu)->info.zeropivot,&((PC_Factor*)ilu)->info.zeropivot,0);CHKERRQ(ierr); 1379b54502bSHong Zhang 138075768bcSBarry Smith dt[0] = ((PC_Factor*)ilu)->info.dt; 139075768bcSBarry Smith dt[1] = ((PC_Factor*)ilu)->info.dtcol; 140075768bcSBarry Smith dt[2] = ((PC_Factor*)ilu)->info.dtcount; 1412401956bSBarry Smith ierr = PetscOptionsRealArray("-pc_factor_use_drop_tolerance","<dt,dtcol,maxrowcount>","PCFactorSetUseDropTolerance",dt,&dtmax,&flg);CHKERRQ(ierr); 1429b54502bSHong Zhang if (flg) { 1432401956bSBarry Smith ierr = PCFactorSetUseDropTolerance(pc,dt[0],dt[1],(PetscInt)dt[2]);CHKERRQ(ierr); 1449b54502bSHong Zhang } 145075768bcSBarry Smith ierr = PetscOptionsReal("-pc_factor_fill","Expected fill in factorization","PCFactorSetFill",((PC_Factor*)ilu)->info.fill,&((PC_Factor*)ilu)->info.fill,&flg);CHKERRQ(ierr); 1462401956bSBarry Smith ierr = PetscOptionsName("-pc_factor_nonzeros_along_diagonal","Reorder to remove zeros from diagonal","PCFactorReorderForNonzeroDiagonal",&flg);CHKERRQ(ierr); 1479b54502bSHong Zhang if (flg) { 1489b54502bSHong Zhang tol = PETSC_DECIDE; 1492401956bSBarry Smith ierr = PetscOptionsReal("-pc_factor_nonzeros_along_diagonal","Reorder to remove zeros from diagonal","PCFactorReorderForNonzeroDiagonal",ilu->nonzerosalongdiagonaltol,&tol,0);CHKERRQ(ierr); 1502401956bSBarry Smith ierr = PCFactorReorderForNonzeroDiagonal(pc,tol);CHKERRQ(ierr); 1519b54502bSHong Zhang } 1529b54502bSHong Zhang 1539b54502bSHong Zhang ierr = MatGetOrderingList(&ordlist);CHKERRQ(ierr); 154075768bcSBarry Smith ierr = PetscOptionsList("-pc_factor_mat_ordering_type","Reorder to reduce nonzeros in ILU","PCFactorSetMatOrderingType",ordlist,((PC_Factor*)ilu)->ordering,tname,256,&flg);CHKERRQ(ierr); 1559b54502bSHong Zhang if (flg) { 156e5a9bf91SBarry Smith ierr = PCFactorSetMatOrderingType(pc,tname);CHKERRQ(ierr); 1579b54502bSHong Zhang } 158075768bcSBarry Smith flg = ((PC_Factor*)ilu)->info.pivotinblocks ? PETSC_TRUE : PETSC_FALSE; 1592401956bSBarry Smith ierr = PetscOptionsTruth("-pc_factor_pivot_in_blocks","Pivot inside matrix blocks for BAIJ and SBAIJ","PCFactorSetPivotInBlocks",flg,&flg,&set);CHKERRQ(ierr); 1609b54502bSHong Zhang if (set) { 1612401956bSBarry Smith ierr = PCFactorSetPivotInBlocks(pc,flg);CHKERRQ(ierr); 1629b54502bSHong Zhang } 16362bba022SBarry Smith ierr = PetscOptionsName("-pc_factor_shift_in_blocks","Shift added to diagonal of block","PCFactorSetShiftInBlocks",&flg);CHKERRQ(ierr); 16462bba022SBarry Smith if (flg) { 16562bba022SBarry Smith ierr = PCFactorSetShiftInBlocks(pc,(PetscReal)PETSC_DECIDE);CHKERRQ(ierr); 16662bba022SBarry Smith } 167075768bcSBarry Smith ierr = PetscOptionsReal("-pc_factor_shift_in_blocks","Shift added to diagonal of block","PCFactorSetShiftInBlocks",((PC_Factor*)ilu)->info.shiftinblocks,&((PC_Factor*)ilu)->info.shiftinblocks,0);CHKERRQ(ierr); 16862bba022SBarry Smith 1699b54502bSHong Zhang ierr = PetscOptionsTail();CHKERRQ(ierr); 1709b54502bSHong Zhang PetscFunctionReturn(0); 1719b54502bSHong Zhang } 1729b54502bSHong Zhang 1739b54502bSHong Zhang #undef __FUNCT__ 1749b54502bSHong Zhang #define __FUNCT__ "PCView_ILU" 1759b54502bSHong Zhang static PetscErrorCode PCView_ILU(PC pc,PetscViewer viewer) 1769b54502bSHong Zhang { 1779b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 1789b54502bSHong Zhang PetscErrorCode ierr; 1799b54502bSHong Zhang PetscTruth isstring,iascii; 1809b54502bSHong Zhang 1819b54502bSHong Zhang PetscFunctionBegin; 1829b54502bSHong Zhang ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_STRING,&isstring);CHKERRQ(ierr); 1839b54502bSHong Zhang ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&iascii);CHKERRQ(ierr); 1849b54502bSHong Zhang if (iascii) { 1859b54502bSHong Zhang if (ilu->usedt) { 186075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: drop tolerance %G\n",((PC_Factor*)ilu)->info.dt);CHKERRQ(ierr); 187075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: max nonzeros per row %D\n",(PetscInt)((PC_Factor*)ilu)->info.dtcount);CHKERRQ(ierr); 188075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: column permutation tolerance %G\n",((PC_Factor*)ilu)->info.dtcol);CHKERRQ(ierr); 189075768bcSBarry Smith } else if (((PC_Factor*)ilu)->info.levels == 1) { 190075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: %D level of fill\n",(PetscInt)((PC_Factor*)ilu)->info.levels);CHKERRQ(ierr); 1919b54502bSHong Zhang } else { 192075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: %D levels of fill\n",(PetscInt)((PC_Factor*)ilu)->info.levels);CHKERRQ(ierr); 1939b54502bSHong Zhang } 194075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: factor fill ratio allocated %G\n",((PC_Factor*)ilu)->info.fill);CHKERRQ(ierr); 195075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: tolerance for zero pivot %G\n",((PC_Factor*)ilu)->info.zeropivot);CHKERRQ(ierr); 196075768bcSBarry Smith if (((PC_Factor*)ilu)->info.shiftpd) {ierr = PetscViewerASCIIPrintf(viewer," ILU: using Manteuffel shift\n");CHKERRQ(ierr);} 197075768bcSBarry Smith if (((PC_Factor*)ilu)->info.shiftnz) {ierr = PetscViewerASCIIPrintf(viewer," ILU: using diagonal shift to prevent zero pivot\n");CHKERRQ(ierr);} 198075768bcSBarry Smith if (((PC_Factor*)ilu)->info.shiftinblocks) {ierr = PetscViewerASCIIPrintf(viewer," ILU: using diagonal shift on blocks to prevent zero pivot\n");CHKERRQ(ierr);} 1999b54502bSHong Zhang if (ilu->inplace) {ierr = PetscViewerASCIIPrintf(viewer," in-place factorization\n");CHKERRQ(ierr);} 2009b54502bSHong Zhang else {ierr = PetscViewerASCIIPrintf(viewer," out-of-place factorization\n");CHKERRQ(ierr);} 201075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," matrix ordering: %s\n",((PC_Factor*)ilu)->ordering);CHKERRQ(ierr); 2029b54502bSHong Zhang if (ilu->reusefill) {ierr = PetscViewerASCIIPrintf(viewer," Reusing fill from past factorization\n");CHKERRQ(ierr);} 2039b54502bSHong Zhang if (ilu->reuseordering) {ierr = PetscViewerASCIIPrintf(viewer," Reusing reordering from past factorization\n");CHKERRQ(ierr);} 204075768bcSBarry Smith if (((PC_Factor*)ilu)->fact) { 205f3a39becSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: factor fill ratio needed %G\n",ilu->actualfill);CHKERRQ(ierr); 2069b54502bSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Factored matrix follows\n");CHKERRQ(ierr); 2079b54502bSHong Zhang ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 208f3a39becSBarry Smith ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 209f3a39becSBarry Smith ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 2109b54502bSHong Zhang ierr = PetscViewerPushFormat(viewer,PETSC_VIEWER_ASCII_INFO);CHKERRQ(ierr); 211075768bcSBarry Smith ierr = MatView(((PC_Factor*)ilu)->fact,viewer);CHKERRQ(ierr); 2129b54502bSHong Zhang ierr = PetscViewerPopFormat(viewer);CHKERRQ(ierr); 2139b54502bSHong Zhang ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 214f3a39becSBarry Smith ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 215f3a39becSBarry Smith ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 2169b54502bSHong Zhang } 2179b54502bSHong Zhang } else if (isstring) { 218075768bcSBarry Smith ierr = PetscViewerStringSPrintf(viewer," lvls=%D,order=%s",(PetscInt)((PC_Factor*)ilu)->info.levels,((PC_Factor*)ilu)->ordering);CHKERRQ(ierr);CHKERRQ(ierr); 2199b54502bSHong Zhang } else { 2209b54502bSHong Zhang SETERRQ1(PETSC_ERR_SUP,"Viewer type %s not supported for PCILU",((PetscObject)viewer)->type_name); 2219b54502bSHong Zhang } 2229b54502bSHong Zhang PetscFunctionReturn(0); 2239b54502bSHong Zhang } 2249b54502bSHong Zhang 2259b54502bSHong Zhang #undef __FUNCT__ 2269b54502bSHong Zhang #define __FUNCT__ "PCSetUp_ILU" 2279b54502bSHong Zhang static PetscErrorCode PCSetUp_ILU(PC pc) 2289b54502bSHong Zhang { 2299b54502bSHong Zhang PetscErrorCode ierr; 2309b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 231f3a39becSBarry Smith MatInfo info; 2329b54502bSHong Zhang 2339b54502bSHong Zhang PetscFunctionBegin; 2349b54502bSHong Zhang if (ilu->inplace) { 235075768bcSBarry Smith CHKMEMQ; 2369b54502bSHong Zhang if (!pc->setupcalled) { 2379b54502bSHong Zhang 2389b54502bSHong Zhang /* In-place factorization only makes sense with the natural ordering, 2399b54502bSHong Zhang so we only need to get the ordering once, even if nonzero structure changes */ 240075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 241efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 242efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 2439b54502bSHong Zhang } 2449b54502bSHong Zhang 2459b54502bSHong Zhang /* In place ILU only makes sense with fill factor of 1.0 because 2469b54502bSHong Zhang cannot have levels of fill */ 247075768bcSBarry Smith ((PC_Factor*)ilu)->info.fill = 1.0; 248075768bcSBarry Smith ((PC_Factor*)ilu)->info.diagonal_fill = 0; 249075768bcSBarry Smith ierr = MatILUFactor(pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 250075768bcSBarry Smith CHKMEMQ; 251075768bcSBarry Smith ((PC_Factor*)ilu)->fact = pc->pmat; 2529b54502bSHong Zhang } else if (ilu->usedt) { 2539b54502bSHong Zhang if (!pc->setupcalled) { 254075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 255075768bcSBarry Smith CHKMEMQ; 256efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 257efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 258075768bcSBarry Smith ierr = MatILUDTFactor(pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 259075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 2609b54502bSHong Zhang } else if (pc->flag != SAME_NONZERO_PATTERN) { 261075768bcSBarry Smith CHKMEMQ; 262075768bcSBarry Smith ierr = MatDestroy(((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 263075768bcSBarry Smith CHKMEMQ; 2649b54502bSHong Zhang if (!ilu->reuseordering) { 2659b54502bSHong Zhang if (ilu->row) {ierr = ISDestroy(ilu->row);CHKERRQ(ierr);} 2669b54502bSHong Zhang if (ilu->col) {ierr = ISDestroy(ilu->col);CHKERRQ(ierr);} 267075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 268efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 269efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 2709b54502bSHong Zhang } 271075768bcSBarry Smith ierr = MatILUDTFactor(pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 272075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 2739b54502bSHong Zhang } else if (!ilu->reusefill) { 274075768bcSBarry Smith ierr = MatDestroy(((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 275075768bcSBarry Smith ierr = MatILUDTFactor(pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 276075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 2779b54502bSHong Zhang } else { 278075768bcSBarry Smith ierr = MatLUFactorNumeric(((PC_Factor*)ilu)->fact,pc->pmat,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 2799b54502bSHong Zhang } 2809b54502bSHong Zhang } else { 2819b54502bSHong Zhang if (!pc->setupcalled) { 2829b54502bSHong Zhang /* first time in so compute reordering and symbolic factorization */ 283075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 284efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 285efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 2869b54502bSHong Zhang /* Remove zeros along diagonal? */ 2879b54502bSHong Zhang if (ilu->nonzerosalongdiagonal) { 2889b54502bSHong Zhang ierr = MatReorderForNonzeroDiagonal(pc->pmat,ilu->nonzerosalongdiagonaltol,ilu->row,ilu->col);CHKERRQ(ierr); 2899b54502bSHong Zhang } 290075768bcSBarry Smith CHKMEMQ; 291075768bcSBarry Smith ierr = MatGetFactor(pc->pmat,MAT_SOLVER_PETSC,MAT_FACTOR_ILU,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 292075768bcSBarry Smith CHKMEMQ; 293075768bcSBarry Smith ierr = MatILUFactorSymbolic(((PC_Factor*)ilu)->fact,pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 294075768bcSBarry Smith ierr = MatGetInfo(((PC_Factor*)ilu)->fact,MAT_LOCAL,&info);CHKERRQ(ierr); 295f3a39becSBarry Smith ilu->actualfill = info.fill_ratio_needed; 296075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 2979b54502bSHong Zhang } else if (pc->flag != SAME_NONZERO_PATTERN) { 2989b54502bSHong Zhang if (!ilu->reuseordering) { 2999b54502bSHong Zhang /* compute a new ordering for the ILU */ 3009b54502bSHong Zhang ierr = ISDestroy(ilu->row);CHKERRQ(ierr); 3019b54502bSHong Zhang ierr = ISDestroy(ilu->col);CHKERRQ(ierr); 302075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 303efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 304efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 3059b54502bSHong Zhang /* Remove zeros along diagonal? */ 3069b54502bSHong Zhang if (ilu->nonzerosalongdiagonal) { 3079b54502bSHong Zhang ierr = MatReorderForNonzeroDiagonal(pc->pmat,ilu->nonzerosalongdiagonaltol,ilu->row,ilu->col);CHKERRQ(ierr); 3089b54502bSHong Zhang } 3099b54502bSHong Zhang } 310075768bcSBarry Smith ierr = MatDestroy(((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 311075768bcSBarry Smith ierr = MatGetFactor(pc->pmat,MAT_SOLVER_PETSC,MAT_FACTOR_ILU,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 312075768bcSBarry Smith ierr = MatILUFactorSymbolic(((PC_Factor*)ilu)->fact,pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 313075768bcSBarry Smith ierr = MatGetInfo(((PC_Factor*)ilu)->fact,MAT_LOCAL,&info);CHKERRQ(ierr); 314f3a39becSBarry Smith ilu->actualfill = info.fill_ratio_needed; 315075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 3169b54502bSHong Zhang } 317075768bcSBarry Smith CHKMEMQ; 318075768bcSBarry Smith ierr = MatLUFactorNumeric(((PC_Factor*)ilu)->fact,pc->pmat,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 319075768bcSBarry Smith CHKMEMQ; 3209b54502bSHong Zhang } 3219b54502bSHong Zhang PetscFunctionReturn(0); 3229b54502bSHong Zhang } 3239b54502bSHong Zhang 3249b54502bSHong Zhang #undef __FUNCT__ 3259b54502bSHong Zhang #define __FUNCT__ "PCDestroy_ILU" 3269b54502bSHong Zhang static PetscErrorCode PCDestroy_ILU(PC pc) 3279b54502bSHong Zhang { 3289b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 3299b54502bSHong Zhang PetscErrorCode ierr; 3309b54502bSHong Zhang 3319b54502bSHong Zhang PetscFunctionBegin; 3329b54502bSHong Zhang ierr = PCDestroy_ILU_Internal(pc);CHKERRQ(ierr); 333075768bcSBarry Smith ierr = PetscStrfree(((PC_Factor*)ilu)->ordering);CHKERRQ(ierr); 3349b54502bSHong Zhang ierr = PetscFree(ilu);CHKERRQ(ierr); 3359b54502bSHong Zhang PetscFunctionReturn(0); 3369b54502bSHong Zhang } 3379b54502bSHong Zhang 3389b54502bSHong Zhang #undef __FUNCT__ 3399b54502bSHong Zhang #define __FUNCT__ "PCApply_ILU" 3409b54502bSHong Zhang static PetscErrorCode PCApply_ILU(PC pc,Vec x,Vec y) 3419b54502bSHong Zhang { 3429b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 3439b54502bSHong Zhang PetscErrorCode ierr; 3449b54502bSHong Zhang 3459b54502bSHong Zhang PetscFunctionBegin; 346075768bcSBarry Smith ierr = MatSolve(((PC_Factor*)ilu)->fact,x,y);CHKERRQ(ierr); 3479b54502bSHong Zhang PetscFunctionReturn(0); 3489b54502bSHong Zhang } 3499b54502bSHong Zhang 3509b54502bSHong Zhang #undef __FUNCT__ 3519b54502bSHong Zhang #define __FUNCT__ "PCApplyTranspose_ILU" 3529b54502bSHong Zhang static PetscErrorCode PCApplyTranspose_ILU(PC pc,Vec x,Vec y) 3539b54502bSHong Zhang { 3549b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 3559b54502bSHong Zhang PetscErrorCode ierr; 3569b54502bSHong Zhang 3579b54502bSHong Zhang PetscFunctionBegin; 358075768bcSBarry Smith ierr = MatSolveTranspose(((PC_Factor*)ilu)->fact,x,y);CHKERRQ(ierr); 3599b54502bSHong Zhang PetscFunctionReturn(0); 3609b54502bSHong Zhang } 3619b54502bSHong Zhang 3629b54502bSHong Zhang /*MC 3639b54502bSHong Zhang PCILU - Incomplete factorization preconditioners. 3649b54502bSHong Zhang 3659b54502bSHong Zhang Options Database Keys: 3662401956bSBarry Smith + -pc_factor_levels <k> - number of levels of fill for ILU(k) 3672401956bSBarry Smith . -pc_factor_in_place - only for ILU(0) with natural ordering, reuses the space of the matrix for 3689b54502bSHong Zhang its factorization (overwrites original matrix) 3692401956bSBarry Smith . -pc_factor_diagonal_fill - fill in a zero diagonal even if levels of fill indicate it wouldn't be fill 3702401956bSBarry Smith . -pc_factor_reuse_ordering - reuse ordering of factorized matrix from previous factorization 3712401956bSBarry Smith . -pc_factor_use_drop_tolerance <dt,dtcol,maxrowcount> - use Saad's drop tolerance ILUdt 37255ba2a51SBarry Smith . -pc_factor_fill <nfill> - expected amount of fill in factored matrix compared to original matrix, nfill > 1 3732401956bSBarry Smith . -pc_factor_nonzeros_along_diagonal - reorder the matrix before factorization to remove zeros from the diagonal, 3749b54502bSHong Zhang this decreases the chance of getting a zero pivot 3752401956bSBarry Smith . -pc_factor_mat_ordering_type <natural,nd,1wd,rcm,qmd> - set the row/column ordering of the factored matrix 3762401956bSBarry Smith . -pc_factor_pivot_in_blocks - for block ILU(k) factorization, i.e. with BAIJ matrices with block size larger 3779b54502bSHong Zhang than 1 the diagonal blocks are factored with partial pivoting (this increases the 3789b54502bSHong Zhang stability of the ILU factorization 37962bba022SBarry Smith . -pc_factor_shift_in_blocks - adds a small diagonal to any block if it is singular during ILU factorization 380f251bdbdSHong Zhang . -pc_factor_shift_nonzero <shift> - Sets shift amount or PETSC_DECIDE for the default 381f251bdbdSHong Zhang - -pc_factor_shift_positive_definite [PETSC_TRUE/PETSC_FALSE] - Activate/Deactivate PCFactorSetShiftPd(); the value 382f251bdbdSHong Zhang is optional with PETSC_TRUE being the default 3839b54502bSHong Zhang 3849b54502bSHong Zhang Level: beginner 3859b54502bSHong Zhang 3869b54502bSHong Zhang Concepts: incomplete factorization 3879b54502bSHong Zhang 388c582cd25SBarry Smith Notes: Only implemented for some matrix formats. (for parallel use you 389c582cd25SBarry Smith must use MATMPIROWBS, see MatCreateMPIRowbs(), this supports only ILU(0) and this is not recommended 390c582cd25SBarry Smith unless you really want a parallel ILU). 3919b54502bSHong Zhang 3929b54502bSHong Zhang For BAIJ matrices this implements a point block ILU 3939b54502bSHong Zhang 394c582cd25SBarry Smith References: 395c582cd25SBarry Smith T. Dupont, R. Kendall, and H. Rachford. An approximate factorization procedure for solving 396c582cd25SBarry Smith self-adjoint elliptic difference equations. SIAM J. Numer. Anal., 5:559--573, 1968. 397c582cd25SBarry Smith 398c582cd25SBarry Smith T.A. Oliphant. An implicit numerical method for solving two-dimensional time-dependent dif- 399c582cd25SBarry Smith fusion problems. Quart. Appl. Math., 19:221--229, 1961. 400c582cd25SBarry Smith 401c582cd25SBarry Smith Review article: APPROXIMATE AND INCOMPLETE FACTORIZATIONS, TONY F. CHAN AND HENK A. VAN DER VORST 402c582cd25SBarry Smith http://igitur-archive.library.uu.nl/math/2001-0621-115821/proc.pdf chapter in Parallel Numerical 403c582cd25SBarry Smith Algorithms, edited by D. Keyes, A. Semah, V. Venkatakrishnan, ICASE/LaRC Interdisciplinary Series in 404c582cd25SBarry Smith Science and Engineering, Kluwer, pp. 167--202. 405c582cd25SBarry Smith 406c582cd25SBarry Smith 4079b54502bSHong Zhang .seealso: PCCreate(), PCSetType(), PCType (for list of available types), PC, PCSOR, MatOrderingType, 4082401956bSBarry Smith PCFactorSetZeroPivot(), PCFactorSetShiftNonzero(), PCFactorSetShiftPd(), PCFactorSetUseDropTolerance(), 409e5a9bf91SBarry Smith PCFactorSetFill(), PCFactorSetMatOrderingType(), PCFactorSetReuseOrdering(), 4102401956bSBarry Smith PCFactorSetLevels(), PCFactorSetUseInPlace(), PCFactorSetAllowDiagonalFill(), PCFactorSetPivotInBlocks(), 411f251bdbdSHong Zhang PCFactorSetShiftNonzero(),PCFactorSetShiftPd() 4129b54502bSHong Zhang 4139b54502bSHong Zhang M*/ 4149b54502bSHong Zhang 4159b54502bSHong Zhang EXTERN_C_BEGIN 4169b54502bSHong Zhang #undef __FUNCT__ 4179b54502bSHong Zhang #define __FUNCT__ "PCCreate_ILU" 418dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCCreate_ILU(PC pc) 4199b54502bSHong Zhang { 4209b54502bSHong Zhang PetscErrorCode ierr; 4219b54502bSHong Zhang PC_ILU *ilu; 4229b54502bSHong Zhang 4239b54502bSHong Zhang PetscFunctionBegin; 42438f2d2fdSLisandro Dalcin ierr = PetscNewLog(pc,PC_ILU,&ilu);CHKERRQ(ierr); 4259b54502bSHong Zhang 426075768bcSBarry Smith ((PC_Factor*)ilu)->fact = 0; 427075768bcSBarry Smith ierr = MatFactorInfoInitialize(&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 428075768bcSBarry Smith ((PC_Factor*)ilu)->info.levels = 0; 429075768bcSBarry Smith ((PC_Factor*)ilu)->info.fill = 1.0; 4309b54502bSHong Zhang ilu->col = 0; 4319b54502bSHong Zhang ilu->row = 0; 4329b54502bSHong Zhang ilu->inplace = PETSC_FALSE; 433075768bcSBarry Smith ierr = PetscStrallocpy(MATORDERING_NATURAL,&((PC_Factor*)ilu)->ordering);CHKERRQ(ierr); 4349b54502bSHong Zhang ilu->reuseordering = PETSC_FALSE; 4359b54502bSHong Zhang ilu->usedt = PETSC_FALSE; 436075768bcSBarry Smith ((PC_Factor*)ilu)->info.dt = PETSC_DEFAULT; 437075768bcSBarry Smith ((PC_Factor*)ilu)->info.dtcount = PETSC_DEFAULT; 438075768bcSBarry Smith ((PC_Factor*)ilu)->info.dtcol = PETSC_DEFAULT; 439075768bcSBarry Smith ((PC_Factor*)ilu)->info.shiftnz = 1.e-12; 440075768bcSBarry Smith ((PC_Factor*)ilu)->info.shiftpd = 0.0; /* false */ 441075768bcSBarry Smith ((PC_Factor*)ilu)->info.zeropivot = 1.e-12; 442075768bcSBarry Smith ((PC_Factor*)ilu)->info.pivotinblocks = 1.0; 443075768bcSBarry Smith ((PC_Factor*)ilu)->info.shiftinblocks = 1.e-12; 4449b54502bSHong Zhang ilu->reusefill = PETSC_FALSE; 445075768bcSBarry Smith ((PC_Factor*)ilu)->info.diagonal_fill = 0; 4469b54502bSHong Zhang pc->data = (void*)ilu; 4479b54502bSHong Zhang 4489b54502bSHong Zhang pc->ops->destroy = PCDestroy_ILU; 4499b54502bSHong Zhang pc->ops->apply = PCApply_ILU; 4509b54502bSHong Zhang pc->ops->applytranspose = PCApplyTranspose_ILU; 4519b54502bSHong Zhang pc->ops->setup = PCSetUp_ILU; 4529b54502bSHong Zhang pc->ops->setfromoptions = PCSetFromOptions_ILU; 45385317021SBarry Smith pc->ops->getfactoredmatrix = PCFactorGetMatrix_Factor; 4549b54502bSHong Zhang pc->ops->view = PCView_ILU; 4559b54502bSHong Zhang pc->ops->applyrichardson = 0; 4569b54502bSHong Zhang 45785317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetZeroPivot_C","PCFactorSetZeroPivot_Factor", 45885317021SBarry Smith PCFactorSetZeroPivot_Factor);CHKERRQ(ierr); 45985317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetShiftNonzero_C","PCFactorSetShiftNonzero_Factor", 46085317021SBarry Smith PCFactorSetShiftNonzero_Factor);CHKERRQ(ierr); 46185317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetShiftPd_C","PCFactorSetShiftPd_Factor", 46285317021SBarry Smith PCFactorSetShiftPd_Factor);CHKERRQ(ierr); 463afaefe49SHong Zhang 4647112b564SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorGetMatSolverPackage_C","PCFactorGetMatSolverPackage_Factor", 4657112b564SBarry Smith PCFactorGetMatSolverPackage_Factor);CHKERRQ(ierr); 4662401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetUseDropTolerance_C","PCFactorSetUseDropTolerance_ILU", 4672401956bSBarry Smith PCFactorSetUseDropTolerance_ILU);CHKERRQ(ierr); 46885317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetFill_C","PCFactorSetFill_Factor", 46985317021SBarry Smith PCFactorSetFill_Factor);CHKERRQ(ierr); 47085317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetMatOrderingType_C","PCFactorSetMatOrderingType_Factor", 47185317021SBarry Smith PCFactorSetMatOrderingType_Factor);CHKERRQ(ierr); 4722401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetReuseOrdering_C","PCFactorSetReuseOrdering_ILU", 4732401956bSBarry Smith PCFactorSetReuseOrdering_ILU);CHKERRQ(ierr); 4742401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetReuseFill_C","PCFactorSetReuseFill_ILU", 4752401956bSBarry Smith PCFactorSetReuseFill_ILU);CHKERRQ(ierr); 47685317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetLevels_C","PCFactorSetLevels_Factor", 47785317021SBarry Smith PCFactorSetLevels_Factor);CHKERRQ(ierr); 4782401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetUseInPlace_C","PCFactorSetUseInPlace_ILU", 4792401956bSBarry Smith PCFactorSetUseInPlace_ILU);CHKERRQ(ierr); 48085317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetAllowDiagonalFill_C","PCFactorSetAllowDiagonalFill_Factor", 48185317021SBarry Smith PCFactorSetAllowDiagonalFill_Factor);CHKERRQ(ierr); 48285317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetPivotInBlocks_C","PCFactorSetPivotInBlocks_Factor", 48385317021SBarry Smith PCFactorSetPivotInBlocks_Factor);CHKERRQ(ierr); 48485317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetShiftInBlocks_C","PCFactorSetShiftInBlocks_Factor", 48585317021SBarry Smith PCFactorSetShiftInBlocks_Factor);CHKERRQ(ierr); 4862401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorReorderForNonzeroDiagonal_C","PCFactorReorderForNonzeroDiagonal_ILU", 4872401956bSBarry Smith PCFactorReorderForNonzeroDiagonal_ILU);CHKERRQ(ierr); 4889b54502bSHong Zhang PetscFunctionReturn(0); 4899b54502bSHong Zhang } 4909b54502bSHong Zhang EXTERN_C_END 491