1dba47a55SKris Buschelman #define PETSCKSP_DLL 2dba47a55SKris Buschelman 39b54502bSHong Zhang /* 49b54502bSHong Zhang Defines a ILU factorization preconditioner for any Mat implementation 59b54502bSHong Zhang */ 67c4f633dSBarry Smith #include "../src/ksp/pc/impls/factor/ilu/ilu.h" /*I "petscpc.h" I*/ 79b54502bSHong Zhang 89b54502bSHong Zhang /* ------------------------------------------------------------------------------------------*/ 9afaefe49SHong Zhang EXTERN_C_BEGIN 10afaefe49SHong Zhang #undef __FUNCT__ 112401956bSBarry Smith #define __FUNCT__ "PCFactorSetReuseFill_ILU" 122401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorSetReuseFill_ILU(PC pc,PetscTruth flag) 132401956bSBarry Smith { 14075768bcSBarry Smith PC_ILU *lu = (PC_ILU*)pc->data; 152401956bSBarry Smith 162401956bSBarry Smith PetscFunctionBegin; 172401956bSBarry Smith lu->reusefill = flag; 182401956bSBarry Smith PetscFunctionReturn(0); 192401956bSBarry Smith } 202401956bSBarry Smith EXTERN_C_END 212401956bSBarry Smith 222401956bSBarry Smith EXTERN_C_BEGIN 232401956bSBarry Smith #undef __FUNCT__ 242401956bSBarry Smith #define __FUNCT__ "PCFactorReorderForNonzeroDiagonal_ILU" 252401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorReorderForNonzeroDiagonal_ILU(PC pc,PetscReal z) 269b54502bSHong Zhang { 279b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 289b54502bSHong Zhang 299b54502bSHong Zhang PetscFunctionBegin; 309b54502bSHong Zhang ilu->nonzerosalongdiagonal = PETSC_TRUE; 319b54502bSHong Zhang if (z == PETSC_DECIDE) { 329b54502bSHong Zhang ilu->nonzerosalongdiagonaltol = 1.e-10; 339b54502bSHong Zhang } else { 349b54502bSHong Zhang ilu->nonzerosalongdiagonaltol = z; 359b54502bSHong Zhang } 369b54502bSHong Zhang PetscFunctionReturn(0); 379b54502bSHong Zhang } 389b54502bSHong Zhang EXTERN_C_END 399b54502bSHong Zhang 409b54502bSHong Zhang #undef __FUNCT__ 419b54502bSHong Zhang #define __FUNCT__ "PCDestroy_ILU_Internal" 429b54502bSHong Zhang PetscErrorCode PCDestroy_ILU_Internal(PC pc) 439b54502bSHong Zhang { 449b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 459b54502bSHong Zhang PetscErrorCode ierr; 469b54502bSHong Zhang 479b54502bSHong Zhang PetscFunctionBegin; 48075768bcSBarry Smith if (!ilu->inplace && ((PC_Factor*)ilu)->fact) {ierr = MatDestroy(((PC_Factor*)ilu)->fact);CHKERRQ(ierr);} 499b54502bSHong Zhang if (ilu->row && ilu->col && ilu->row != ilu->col) {ierr = ISDestroy(ilu->row);CHKERRQ(ierr);} 509b54502bSHong Zhang if (ilu->col) {ierr = ISDestroy(ilu->col);CHKERRQ(ierr);} 519b54502bSHong Zhang PetscFunctionReturn(0); 529b54502bSHong Zhang } 539b54502bSHong Zhang 549b54502bSHong Zhang EXTERN_C_BEGIN 559b54502bSHong Zhang #undef __FUNCT__ 562401956bSBarry Smith #define __FUNCT__ "PCFactorSetUseDropTolerance_ILU" 572401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorSetUseDropTolerance_ILU(PC pc,PetscReal dt,PetscReal dtcol,PetscInt dtcount) 589b54502bSHong Zhang { 59075768bcSBarry Smith PC_ILU *ilu = (PC_ILU*)pc->data; 609b54502bSHong Zhang PetscErrorCode ierr; 619b54502bSHong Zhang 629b54502bSHong Zhang PetscFunctionBegin; 63075768bcSBarry Smith if (pc->setupcalled && (!ilu->usedt || ((PC_Factor*)ilu)->info.dt != dt || ((PC_Factor*)ilu)->info.dtcol != dtcol || ((PC_Factor*)ilu)->info.dtcount != dtcount)) { 649b54502bSHong Zhang pc->setupcalled = 0; 659b54502bSHong Zhang ierr = PCDestroy_ILU_Internal(pc);CHKERRQ(ierr); 669b54502bSHong Zhang } 679b54502bSHong Zhang ilu->usedt = PETSC_TRUE; 68075768bcSBarry Smith ((PC_Factor*)ilu)->info.dt = dt; 69075768bcSBarry Smith ((PC_Factor*)ilu)->info.dtcol = dtcol; 70075768bcSBarry Smith ((PC_Factor*)ilu)->info.dtcount = dtcount; 71075768bcSBarry Smith ((PC_Factor*)ilu)->info.fill = PETSC_DEFAULT; 729b54502bSHong Zhang PetscFunctionReturn(0); 739b54502bSHong Zhang } 749b54502bSHong Zhang EXTERN_C_END 759b54502bSHong Zhang 769b54502bSHong Zhang EXTERN_C_BEGIN 779b54502bSHong Zhang #undef __FUNCT__ 782401956bSBarry Smith #define __FUNCT__ "PCFactorSetReuseOrdering_ILU" 792401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorSetReuseOrdering_ILU(PC pc,PetscTruth flag) 809b54502bSHong Zhang { 81075768bcSBarry Smith PC_ILU *ilu = (PC_ILU*)pc->data; 829b54502bSHong Zhang 839b54502bSHong Zhang PetscFunctionBegin; 849b54502bSHong Zhang ilu->reuseordering = flag; 859b54502bSHong Zhang PetscFunctionReturn(0); 869b54502bSHong Zhang } 879b54502bSHong Zhang EXTERN_C_END 889b54502bSHong Zhang 899b54502bSHong Zhang EXTERN_C_BEGIN 909b54502bSHong Zhang #undef __FUNCT__ 912401956bSBarry Smith #define __FUNCT__ "PCFactorSetUseInPlace_ILU" 922401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorSetUseInPlace_ILU(PC pc) 939b54502bSHong Zhang { 94075768bcSBarry Smith PC_ILU *dir = (PC_ILU*)pc->data; 959b54502bSHong Zhang 969b54502bSHong Zhang PetscFunctionBegin; 979b54502bSHong Zhang dir->inplace = PETSC_TRUE; 989b54502bSHong Zhang PetscFunctionReturn(0); 999b54502bSHong Zhang } 1009b54502bSHong Zhang EXTERN_C_END 1019b54502bSHong Zhang 1029b54502bSHong Zhang #undef __FUNCT__ 1039b54502bSHong Zhang #define __FUNCT__ "PCSetFromOptions_ILU" 1049b54502bSHong Zhang static PetscErrorCode PCSetFromOptions_ILU(PC pc) 1059b54502bSHong Zhang { 1069b54502bSHong Zhang PetscErrorCode ierr; 1079b54502bSHong Zhang PetscInt dtmax = 3,itmp; 108*8ff23777SHong Zhang PetscTruth flg; 1099b54502bSHong Zhang PetscReal dt[3]; 1109b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 1119b54502bSHong Zhang PetscReal tol; 1129b54502bSHong Zhang 1139b54502bSHong Zhang PetscFunctionBegin; 1149b54502bSHong Zhang ierr = PetscOptionsHead("ILU Options");CHKERRQ(ierr); 115*8ff23777SHong Zhang ierr = PCSetFromOptions_Factor(pc);CHKERRQ(ierr); 116*8ff23777SHong Zhang 117075768bcSBarry Smith ierr = PetscOptionsInt("-pc_factor_levels","levels of fill","PCFactorSetLevels",(PetscInt)((PC_Factor*)ilu)->info.levels,&itmp,&flg);CHKERRQ(ierr); 118075768bcSBarry Smith if (flg) ((PC_Factor*)ilu)->info.levels = itmp; 11990d69ab7SBarry Smith flg = PETSC_FALSE; 12090d69ab7SBarry Smith ierr = PetscOptionsTruth("-pc_factor_diagonal_fill","Allow fill into empty diagonal entry","PCFactorSetAllowDiagonalFill",flg,&flg,PETSC_NULL);CHKERRQ(ierr); 121075768bcSBarry Smith ((PC_Factor*)ilu)->info.diagonal_fill = (double) flg; 1229b54502bSHong Zhang 123075768bcSBarry Smith dt[0] = ((PC_Factor*)ilu)->info.dt; 124075768bcSBarry Smith dt[1] = ((PC_Factor*)ilu)->info.dtcol; 125075768bcSBarry Smith dt[2] = ((PC_Factor*)ilu)->info.dtcount; 1262401956bSBarry Smith ierr = PetscOptionsRealArray("-pc_factor_use_drop_tolerance","<dt,dtcol,maxrowcount>","PCFactorSetUseDropTolerance",dt,&dtmax,&flg);CHKERRQ(ierr); 1279b54502bSHong Zhang if (flg) { 1282401956bSBarry Smith ierr = PCFactorSetUseDropTolerance(pc,dt[0],dt[1],(PetscInt)dt[2]);CHKERRQ(ierr); 1299b54502bSHong Zhang } 130*8ff23777SHong Zhang 1312401956bSBarry Smith ierr = PetscOptionsName("-pc_factor_nonzeros_along_diagonal","Reorder to remove zeros from diagonal","PCFactorReorderForNonzeroDiagonal",&flg);CHKERRQ(ierr); 1329b54502bSHong Zhang if (flg) { 1339b54502bSHong Zhang tol = PETSC_DECIDE; 1342401956bSBarry Smith ierr = PetscOptionsReal("-pc_factor_nonzeros_along_diagonal","Reorder to remove zeros from diagonal","PCFactorReorderForNonzeroDiagonal",ilu->nonzerosalongdiagonaltol,&tol,0);CHKERRQ(ierr); 1352401956bSBarry Smith ierr = PCFactorReorderForNonzeroDiagonal(pc,tol);CHKERRQ(ierr); 1369b54502bSHong Zhang } 1379b54502bSHong Zhang 1389b54502bSHong Zhang ierr = PetscOptionsTail();CHKERRQ(ierr); 1399b54502bSHong Zhang PetscFunctionReturn(0); 1409b54502bSHong Zhang } 1419b54502bSHong Zhang 1429b54502bSHong Zhang #undef __FUNCT__ 1439b54502bSHong Zhang #define __FUNCT__ "PCView_ILU" 1449b54502bSHong Zhang static PetscErrorCode PCView_ILU(PC pc,PetscViewer viewer) 1459b54502bSHong Zhang { 1469b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 1479b54502bSHong Zhang PetscErrorCode ierr; 1489b54502bSHong Zhang PetscTruth isstring,iascii; 1499b54502bSHong Zhang 1509b54502bSHong Zhang PetscFunctionBegin; 1519b54502bSHong Zhang ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_STRING,&isstring);CHKERRQ(ierr); 1529b54502bSHong Zhang ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&iascii);CHKERRQ(ierr); 1539b54502bSHong Zhang if (iascii) { 1549b54502bSHong Zhang if (ilu->usedt) { 155075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: drop tolerance %G\n",((PC_Factor*)ilu)->info.dt);CHKERRQ(ierr); 156075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: max nonzeros per row %D\n",(PetscInt)((PC_Factor*)ilu)->info.dtcount);CHKERRQ(ierr); 157075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: column permutation tolerance %G\n",((PC_Factor*)ilu)->info.dtcol);CHKERRQ(ierr); 158075768bcSBarry Smith } else if (((PC_Factor*)ilu)->info.levels == 1) { 159075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: %D level of fill\n",(PetscInt)((PC_Factor*)ilu)->info.levels);CHKERRQ(ierr); 1609b54502bSHong Zhang } else { 161075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: %D levels of fill\n",(PetscInt)((PC_Factor*)ilu)->info.levels);CHKERRQ(ierr); 1629b54502bSHong Zhang } 163075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: factor fill ratio allocated %G\n",((PC_Factor*)ilu)->info.fill);CHKERRQ(ierr); 164075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: tolerance for zero pivot %G\n",((PC_Factor*)ilu)->info.zeropivot);CHKERRQ(ierr); 165075768bcSBarry Smith if (((PC_Factor*)ilu)->info.shiftpd) {ierr = PetscViewerASCIIPrintf(viewer," ILU: using Manteuffel shift\n");CHKERRQ(ierr);} 166075768bcSBarry Smith if (((PC_Factor*)ilu)->info.shiftnz) {ierr = PetscViewerASCIIPrintf(viewer," ILU: using diagonal shift to prevent zero pivot\n");CHKERRQ(ierr);} 167075768bcSBarry Smith if (((PC_Factor*)ilu)->info.shiftinblocks) {ierr = PetscViewerASCIIPrintf(viewer," ILU: using diagonal shift on blocks to prevent zero pivot\n");CHKERRQ(ierr);} 1689b54502bSHong Zhang if (ilu->inplace) {ierr = PetscViewerASCIIPrintf(viewer," in-place factorization\n");CHKERRQ(ierr);} 1699b54502bSHong Zhang else {ierr = PetscViewerASCIIPrintf(viewer," out-of-place factorization\n");CHKERRQ(ierr);} 170075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," matrix ordering: %s\n",((PC_Factor*)ilu)->ordering);CHKERRQ(ierr); 1719b54502bSHong Zhang if (ilu->reusefill) {ierr = PetscViewerASCIIPrintf(viewer," Reusing fill from past factorization\n");CHKERRQ(ierr);} 1729b54502bSHong Zhang if (ilu->reuseordering) {ierr = PetscViewerASCIIPrintf(viewer," Reusing reordering from past factorization\n");CHKERRQ(ierr);} 173075768bcSBarry Smith if (((PC_Factor*)ilu)->fact) { 174f3a39becSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: factor fill ratio needed %G\n",ilu->actualfill);CHKERRQ(ierr); 1759b54502bSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Factored matrix follows\n");CHKERRQ(ierr); 1769b54502bSHong Zhang ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 177f3a39becSBarry Smith ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 178f3a39becSBarry Smith ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 1799b54502bSHong Zhang ierr = PetscViewerPushFormat(viewer,PETSC_VIEWER_ASCII_INFO);CHKERRQ(ierr); 180075768bcSBarry Smith ierr = MatView(((PC_Factor*)ilu)->fact,viewer);CHKERRQ(ierr); 1819b54502bSHong Zhang ierr = PetscViewerPopFormat(viewer);CHKERRQ(ierr); 1829b54502bSHong Zhang ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 183f3a39becSBarry Smith ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 184f3a39becSBarry Smith ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 1859b54502bSHong Zhang } 1869b54502bSHong Zhang } else if (isstring) { 187075768bcSBarry Smith ierr = PetscViewerStringSPrintf(viewer," lvls=%D,order=%s",(PetscInt)((PC_Factor*)ilu)->info.levels,((PC_Factor*)ilu)->ordering);CHKERRQ(ierr);CHKERRQ(ierr); 1889b54502bSHong Zhang } else { 1899b54502bSHong Zhang SETERRQ1(PETSC_ERR_SUP,"Viewer type %s not supported for PCILU",((PetscObject)viewer)->type_name); 1909b54502bSHong Zhang } 1919b54502bSHong Zhang PetscFunctionReturn(0); 1929b54502bSHong Zhang } 1939b54502bSHong Zhang 1949b54502bSHong Zhang #undef __FUNCT__ 1959b54502bSHong Zhang #define __FUNCT__ "PCSetUp_ILU" 1969b54502bSHong Zhang static PetscErrorCode PCSetUp_ILU(PC pc) 1979b54502bSHong Zhang { 1989b54502bSHong Zhang PetscErrorCode ierr; 1999b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 200f3a39becSBarry Smith MatInfo info; 2019b54502bSHong Zhang 2029b54502bSHong Zhang PetscFunctionBegin; 2039b54502bSHong Zhang if (ilu->inplace) { 204075768bcSBarry Smith CHKMEMQ; 2059b54502bSHong Zhang if (!pc->setupcalled) { 2069b54502bSHong Zhang 2079b54502bSHong Zhang /* In-place factorization only makes sense with the natural ordering, 2089b54502bSHong Zhang so we only need to get the ordering once, even if nonzero structure changes */ 209075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 210efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 211efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 2129b54502bSHong Zhang } 2139b54502bSHong Zhang 2149b54502bSHong Zhang /* In place ILU only makes sense with fill factor of 1.0 because 2159b54502bSHong Zhang cannot have levels of fill */ 216075768bcSBarry Smith ((PC_Factor*)ilu)->info.fill = 1.0; 217075768bcSBarry Smith ((PC_Factor*)ilu)->info.diagonal_fill = 0; 218075768bcSBarry Smith ierr = MatILUFactor(pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 219075768bcSBarry Smith CHKMEMQ; 220075768bcSBarry Smith ((PC_Factor*)ilu)->fact = pc->pmat; 2219b54502bSHong Zhang } else if (ilu->usedt) { 2229b54502bSHong Zhang if (!pc->setupcalled) { 223075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 224075768bcSBarry Smith CHKMEMQ; 2251da05e5aSHong Zhang ierr = MatGetFactor(pc->pmat,MAT_SOLVER_PETSC,MAT_FACTOR_ILUDT,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 226efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 227efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 228075768bcSBarry Smith ierr = MatILUDTFactor(pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 229075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 2309b54502bSHong Zhang } else if (pc->flag != SAME_NONZERO_PATTERN) { 231075768bcSBarry Smith CHKMEMQ; 232075768bcSBarry Smith ierr = MatDestroy(((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 233075768bcSBarry Smith CHKMEMQ; 2349b54502bSHong Zhang if (!ilu->reuseordering) { 2359b54502bSHong Zhang if (ilu->row) {ierr = ISDestroy(ilu->row);CHKERRQ(ierr);} 2369b54502bSHong Zhang if (ilu->col) {ierr = ISDestroy(ilu->col);CHKERRQ(ierr);} 237075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 238efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 239efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 2409b54502bSHong Zhang } 241b78a477dSHong Zhang ierr = MatGetFactor(pc->pmat,MAT_SOLVER_PETSC,MAT_FACTOR_ILUDT,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 242075768bcSBarry Smith ierr = MatILUDTFactor(pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 243075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 2449b54502bSHong Zhang } else if (!ilu->reusefill) { 245075768bcSBarry Smith ierr = MatDestroy(((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 246b78a477dSHong Zhang ierr = MatGetFactor(pc->pmat,MAT_SOLVER_PETSC,MAT_FACTOR_ILUDT,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 247075768bcSBarry Smith ierr = MatILUDTFactor(pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 248075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 2499b54502bSHong Zhang } else { 250075768bcSBarry Smith ierr = MatLUFactorNumeric(((PC_Factor*)ilu)->fact,pc->pmat,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 2519b54502bSHong Zhang } 2529b54502bSHong Zhang } else { 2539b54502bSHong Zhang if (!pc->setupcalled) { 2549b54502bSHong Zhang /* first time in so compute reordering and symbolic factorization */ 255075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 256efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 257efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 2589b54502bSHong Zhang /* Remove zeros along diagonal? */ 2599b54502bSHong Zhang if (ilu->nonzerosalongdiagonal) { 2609b54502bSHong Zhang ierr = MatReorderForNonzeroDiagonal(pc->pmat,ilu->nonzerosalongdiagonaltol,ilu->row,ilu->col);CHKERRQ(ierr); 2619b54502bSHong Zhang } 262075768bcSBarry Smith CHKMEMQ; 26311bfe483SHong Zhang ierr = MatGetFactor(pc->pmat,((PC_Factor*)ilu)->solvertype,MAT_FACTOR_ILU,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 264075768bcSBarry Smith CHKMEMQ; 265075768bcSBarry Smith ierr = MatILUFactorSymbolic(((PC_Factor*)ilu)->fact,pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 266075768bcSBarry Smith ierr = MatGetInfo(((PC_Factor*)ilu)->fact,MAT_LOCAL,&info);CHKERRQ(ierr); 267f3a39becSBarry Smith ilu->actualfill = info.fill_ratio_needed; 268075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 2699b54502bSHong Zhang } else if (pc->flag != SAME_NONZERO_PATTERN) { 2709b54502bSHong Zhang if (!ilu->reuseordering) { 2719b54502bSHong Zhang /* compute a new ordering for the ILU */ 2729b54502bSHong Zhang ierr = ISDestroy(ilu->row);CHKERRQ(ierr); 2739b54502bSHong Zhang ierr = ISDestroy(ilu->col);CHKERRQ(ierr); 274075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 275efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 276efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 2779b54502bSHong Zhang /* Remove zeros along diagonal? */ 2789b54502bSHong Zhang if (ilu->nonzerosalongdiagonal) { 2799b54502bSHong Zhang ierr = MatReorderForNonzeroDiagonal(pc->pmat,ilu->nonzerosalongdiagonaltol,ilu->row,ilu->col);CHKERRQ(ierr); 2809b54502bSHong Zhang } 2819b54502bSHong Zhang } 282075768bcSBarry Smith ierr = MatDestroy(((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 283075768bcSBarry Smith ierr = MatGetFactor(pc->pmat,MAT_SOLVER_PETSC,MAT_FACTOR_ILU,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 284075768bcSBarry Smith ierr = MatILUFactorSymbolic(((PC_Factor*)ilu)->fact,pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 285075768bcSBarry Smith ierr = MatGetInfo(((PC_Factor*)ilu)->fact,MAT_LOCAL,&info);CHKERRQ(ierr); 286f3a39becSBarry Smith ilu->actualfill = info.fill_ratio_needed; 287075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 2889b54502bSHong Zhang } 289075768bcSBarry Smith CHKMEMQ; 290075768bcSBarry Smith ierr = MatLUFactorNumeric(((PC_Factor*)ilu)->fact,pc->pmat,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 291075768bcSBarry Smith CHKMEMQ; 2929b54502bSHong Zhang } 2939b54502bSHong Zhang PetscFunctionReturn(0); 2949b54502bSHong Zhang } 2959b54502bSHong Zhang 2969b54502bSHong Zhang #undef __FUNCT__ 2979b54502bSHong Zhang #define __FUNCT__ "PCDestroy_ILU" 2989b54502bSHong Zhang static PetscErrorCode PCDestroy_ILU(PC pc) 2999b54502bSHong Zhang { 3009b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 3019b54502bSHong Zhang PetscErrorCode ierr; 3029b54502bSHong Zhang 3039b54502bSHong Zhang PetscFunctionBegin; 3049b54502bSHong Zhang ierr = PCDestroy_ILU_Internal(pc);CHKERRQ(ierr); 30562ba1fd3SLisandro Dalcin ierr = PetscStrfree(((PC_Factor*)ilu)->solvertype);CHKERRQ(ierr); 306075768bcSBarry Smith ierr = PetscStrfree(((PC_Factor*)ilu)->ordering);CHKERRQ(ierr); 3079b54502bSHong Zhang ierr = PetscFree(ilu);CHKERRQ(ierr); 3089b54502bSHong Zhang PetscFunctionReturn(0); 3099b54502bSHong Zhang } 3109b54502bSHong Zhang 3119b54502bSHong Zhang #undef __FUNCT__ 3129b54502bSHong Zhang #define __FUNCT__ "PCApply_ILU" 3139b54502bSHong Zhang static PetscErrorCode PCApply_ILU(PC pc,Vec x,Vec y) 3149b54502bSHong Zhang { 3159b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 3169b54502bSHong Zhang PetscErrorCode ierr; 3179b54502bSHong Zhang 3189b54502bSHong Zhang PetscFunctionBegin; 319075768bcSBarry Smith ierr = MatSolve(((PC_Factor*)ilu)->fact,x,y);CHKERRQ(ierr); 3209b54502bSHong Zhang PetscFunctionReturn(0); 3219b54502bSHong Zhang } 3229b54502bSHong Zhang 3239b54502bSHong Zhang #undef __FUNCT__ 3249b54502bSHong Zhang #define __FUNCT__ "PCApplyTranspose_ILU" 3259b54502bSHong Zhang static PetscErrorCode PCApplyTranspose_ILU(PC pc,Vec x,Vec y) 3269b54502bSHong Zhang { 3279b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 3289b54502bSHong Zhang PetscErrorCode ierr; 3299b54502bSHong Zhang 3309b54502bSHong Zhang PetscFunctionBegin; 331075768bcSBarry Smith ierr = MatSolveTranspose(((PC_Factor*)ilu)->fact,x,y);CHKERRQ(ierr); 3329b54502bSHong Zhang PetscFunctionReturn(0); 3339b54502bSHong Zhang } 3349b54502bSHong Zhang 3359b54502bSHong Zhang /*MC 3369b54502bSHong Zhang PCILU - Incomplete factorization preconditioners. 3379b54502bSHong Zhang 3389b54502bSHong Zhang Options Database Keys: 3392401956bSBarry Smith + -pc_factor_levels <k> - number of levels of fill for ILU(k) 3402401956bSBarry Smith . -pc_factor_in_place - only for ILU(0) with natural ordering, reuses the space of the matrix for 3419b54502bSHong Zhang its factorization (overwrites original matrix) 3422401956bSBarry Smith . -pc_factor_diagonal_fill - fill in a zero diagonal even if levels of fill indicate it wouldn't be fill 3432401956bSBarry Smith . -pc_factor_reuse_ordering - reuse ordering of factorized matrix from previous factorization 3442401956bSBarry Smith . -pc_factor_use_drop_tolerance <dt,dtcol,maxrowcount> - use Saad's drop tolerance ILUdt 34555ba2a51SBarry Smith . -pc_factor_fill <nfill> - expected amount of fill in factored matrix compared to original matrix, nfill > 1 3462401956bSBarry Smith . -pc_factor_nonzeros_along_diagonal - reorder the matrix before factorization to remove zeros from the diagonal, 3479b54502bSHong Zhang this decreases the chance of getting a zero pivot 3482401956bSBarry Smith . -pc_factor_mat_ordering_type <natural,nd,1wd,rcm,qmd> - set the row/column ordering of the factored matrix 3492401956bSBarry Smith . -pc_factor_pivot_in_blocks - for block ILU(k) factorization, i.e. with BAIJ matrices with block size larger 3509b54502bSHong Zhang than 1 the diagonal blocks are factored with partial pivoting (this increases the 3519b54502bSHong Zhang stability of the ILU factorization 35262bba022SBarry Smith . -pc_factor_shift_in_blocks - adds a small diagonal to any block if it is singular during ILU factorization 353f251bdbdSHong Zhang . -pc_factor_shift_nonzero <shift> - Sets shift amount or PETSC_DECIDE for the default 35453ae6812SBarry Smith - -pc_factor_shift_positive_definite true or false - Activate/Deactivate PCFactorSetShiftPd(); the value 35553ae6812SBarry Smith is optional with true being the default 3569b54502bSHong Zhang 3579b54502bSHong Zhang Level: beginner 3589b54502bSHong Zhang 3599b54502bSHong Zhang Concepts: incomplete factorization 3609b54502bSHong Zhang 361c582cd25SBarry Smith Notes: Only implemented for some matrix formats. (for parallel use you 362c582cd25SBarry Smith must use MATMPIROWBS, see MatCreateMPIRowbs(), this supports only ILU(0) and this is not recommended 363c582cd25SBarry Smith unless you really want a parallel ILU). 3649b54502bSHong Zhang 3659b54502bSHong Zhang For BAIJ matrices this implements a point block ILU 3669b54502bSHong Zhang 367c582cd25SBarry Smith References: 368c582cd25SBarry Smith T. Dupont, R. Kendall, and H. Rachford. An approximate factorization procedure for solving 369c582cd25SBarry Smith self-adjoint elliptic difference equations. SIAM J. Numer. Anal., 5:559--573, 1968. 370c582cd25SBarry Smith 371c582cd25SBarry Smith T.A. Oliphant. An implicit numerical method for solving two-dimensional time-dependent dif- 372c582cd25SBarry Smith fusion problems. Quart. Appl. Math., 19:221--229, 1961. 373c582cd25SBarry Smith 374c582cd25SBarry Smith Review article: APPROXIMATE AND INCOMPLETE FACTORIZATIONS, TONY F. CHAN AND HENK A. VAN DER VORST 375c582cd25SBarry Smith http://igitur-archive.library.uu.nl/math/2001-0621-115821/proc.pdf chapter in Parallel Numerical 376c582cd25SBarry Smith Algorithms, edited by D. Keyes, A. Semah, V. Venkatakrishnan, ICASE/LaRC Interdisciplinary Series in 377c582cd25SBarry Smith Science and Engineering, Kluwer, pp. 167--202. 378c582cd25SBarry Smith 379c582cd25SBarry Smith 3809b54502bSHong Zhang .seealso: PCCreate(), PCSetType(), PCType (for list of available types), PC, PCSOR, MatOrderingType, 381*8ff23777SHong Zhang PCFactorSetZeroPivot(), PCFactorSetShiftNonzero(), PCFactorSetShiftPd(), PCFactorSetShiftInBlocks(), 382*8ff23777SHong Zhang PCFactorSetUseDropTolerance(),PCFactorSetFill(), PCFactorSetMatOrderingType(), PCFactorSetReuseOrdering(), 383*8ff23777SHong Zhang PCFactorSetLevels(), PCFactorSetUseInPlace(), PCFactorSetAllowDiagonalFill(), PCFactorSetPivotInBlocks() 3849b54502bSHong Zhang 3859b54502bSHong Zhang M*/ 3869b54502bSHong Zhang 3879b54502bSHong Zhang EXTERN_C_BEGIN 3889b54502bSHong Zhang #undef __FUNCT__ 3899b54502bSHong Zhang #define __FUNCT__ "PCCreate_ILU" 390dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCCreate_ILU(PC pc) 3919b54502bSHong Zhang { 3929b54502bSHong Zhang PetscErrorCode ierr; 3939b54502bSHong Zhang PC_ILU *ilu; 3949b54502bSHong Zhang 3959b54502bSHong Zhang PetscFunctionBegin; 39638f2d2fdSLisandro Dalcin ierr = PetscNewLog(pc,PC_ILU,&ilu);CHKERRQ(ierr); 3979b54502bSHong Zhang 398075768bcSBarry Smith ((PC_Factor*)ilu)->fact = 0; 399075768bcSBarry Smith ierr = MatFactorInfoInitialize(&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 400075768bcSBarry Smith ((PC_Factor*)ilu)->info.levels = 0; 401075768bcSBarry Smith ((PC_Factor*)ilu)->info.fill = 1.0; 4029b54502bSHong Zhang ilu->col = 0; 4039b54502bSHong Zhang ilu->row = 0; 4049b54502bSHong Zhang ilu->inplace = PETSC_FALSE; 40511bfe483SHong Zhang ierr = PetscStrallocpy(MAT_SOLVER_PETSC,&((PC_Factor*)ilu)->solvertype);CHKERRQ(ierr); 406075768bcSBarry Smith ierr = PetscStrallocpy(MATORDERING_NATURAL,&((PC_Factor*)ilu)->ordering);CHKERRQ(ierr); 4079b54502bSHong Zhang ilu->reuseordering = PETSC_FALSE; 4089b54502bSHong Zhang ilu->usedt = PETSC_FALSE; 409075768bcSBarry Smith ((PC_Factor*)ilu)->info.dt = PETSC_DEFAULT; 410075768bcSBarry Smith ((PC_Factor*)ilu)->info.dtcount = PETSC_DEFAULT; 411075768bcSBarry Smith ((PC_Factor*)ilu)->info.dtcol = PETSC_DEFAULT; 412075768bcSBarry Smith ((PC_Factor*)ilu)->info.shiftnz = 1.e-12; 413075768bcSBarry Smith ((PC_Factor*)ilu)->info.shiftpd = 0.0; /* false */ 414075768bcSBarry Smith ((PC_Factor*)ilu)->info.zeropivot = 1.e-12; 415075768bcSBarry Smith ((PC_Factor*)ilu)->info.pivotinblocks = 1.0; 416075768bcSBarry Smith ((PC_Factor*)ilu)->info.shiftinblocks = 1.e-12; 4179b54502bSHong Zhang ilu->reusefill = PETSC_FALSE; 418075768bcSBarry Smith ((PC_Factor*)ilu)->info.diagonal_fill = 0; 4199b54502bSHong Zhang pc->data = (void*)ilu; 4209b54502bSHong Zhang 4219b54502bSHong Zhang pc->ops->destroy = PCDestroy_ILU; 4229b54502bSHong Zhang pc->ops->apply = PCApply_ILU; 4239b54502bSHong Zhang pc->ops->applytranspose = PCApplyTranspose_ILU; 4249b54502bSHong Zhang pc->ops->setup = PCSetUp_ILU; 4259b54502bSHong Zhang pc->ops->setfromoptions = PCSetFromOptions_ILU; 42685317021SBarry Smith pc->ops->getfactoredmatrix = PCFactorGetMatrix_Factor; 4279b54502bSHong Zhang pc->ops->view = PCView_ILU; 4289b54502bSHong Zhang pc->ops->applyrichardson = 0; 4299b54502bSHong Zhang 43085317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetZeroPivot_C","PCFactorSetZeroPivot_Factor", 43185317021SBarry Smith PCFactorSetZeroPivot_Factor);CHKERRQ(ierr); 43285317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetShiftNonzero_C","PCFactorSetShiftNonzero_Factor", 43385317021SBarry Smith PCFactorSetShiftNonzero_Factor);CHKERRQ(ierr); 43485317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetShiftPd_C","PCFactorSetShiftPd_Factor", 43585317021SBarry Smith PCFactorSetShiftPd_Factor);CHKERRQ(ierr); 436*8ff23777SHong Zhang ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetShiftInBlocks_C","PCFactorSetShiftInBlocks_Factor", 437*8ff23777SHong Zhang PCFactorSetShiftInBlocks_Factor);CHKERRQ(ierr); 438afaefe49SHong Zhang 4397112b564SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorGetMatSolverPackage_C","PCFactorGetMatSolverPackage_Factor", 4407112b564SBarry Smith PCFactorGetMatSolverPackage_Factor);CHKERRQ(ierr); 44111bfe483SHong Zhang ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetMatSolverPackage_C","PCFactorSetMatSolverPackage_Factor", 44211bfe483SHong Zhang PCFactorSetMatSolverPackage_Factor);CHKERRQ(ierr); 4432401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetUseDropTolerance_C","PCFactorSetUseDropTolerance_ILU", 4442401956bSBarry Smith PCFactorSetUseDropTolerance_ILU);CHKERRQ(ierr); 44585317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetFill_C","PCFactorSetFill_Factor", 44685317021SBarry Smith PCFactorSetFill_Factor);CHKERRQ(ierr); 44785317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetMatOrderingType_C","PCFactorSetMatOrderingType_Factor", 44885317021SBarry Smith PCFactorSetMatOrderingType_Factor);CHKERRQ(ierr); 4492401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetReuseOrdering_C","PCFactorSetReuseOrdering_ILU", 4502401956bSBarry Smith PCFactorSetReuseOrdering_ILU);CHKERRQ(ierr); 4512401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetReuseFill_C","PCFactorSetReuseFill_ILU", 4522401956bSBarry Smith PCFactorSetReuseFill_ILU);CHKERRQ(ierr); 45385317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetLevels_C","PCFactorSetLevels_Factor", 45485317021SBarry Smith PCFactorSetLevels_Factor);CHKERRQ(ierr); 4552401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetUseInPlace_C","PCFactorSetUseInPlace_ILU", 4562401956bSBarry Smith PCFactorSetUseInPlace_ILU);CHKERRQ(ierr); 45785317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetAllowDiagonalFill_C","PCFactorSetAllowDiagonalFill_Factor", 45885317021SBarry Smith PCFactorSetAllowDiagonalFill_Factor);CHKERRQ(ierr); 45985317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetPivotInBlocks_C","PCFactorSetPivotInBlocks_Factor", 46085317021SBarry Smith PCFactorSetPivotInBlocks_Factor);CHKERRQ(ierr); 4612401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorReorderForNonzeroDiagonal_C","PCFactorReorderForNonzeroDiagonal_ILU", 4622401956bSBarry Smith PCFactorReorderForNonzeroDiagonal_ILU);CHKERRQ(ierr); 4639b54502bSHong Zhang PetscFunctionReturn(0); 4649b54502bSHong Zhang } 4659b54502bSHong Zhang EXTERN_C_END 466