1dba47a55SKris Buschelman #define PETSCKSP_DLL 2dba47a55SKris Buschelman 39b54502bSHong Zhang /* 49b54502bSHong Zhang Defines a ILU factorization preconditioner for any Mat implementation 59b54502bSHong Zhang */ 67c4f633dSBarry Smith #include "../src/ksp/pc/impls/factor/ilu/ilu.h" /*I "petscpc.h" I*/ 79b54502bSHong Zhang 89b54502bSHong Zhang /* ------------------------------------------------------------------------------------------*/ 9afaefe49SHong Zhang EXTERN_C_BEGIN 10afaefe49SHong Zhang #undef __FUNCT__ 112401956bSBarry Smith #define __FUNCT__ "PCFactorSetReuseFill_ILU" 122401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorSetReuseFill_ILU(PC pc,PetscTruth flag) 132401956bSBarry Smith { 14075768bcSBarry Smith PC_ILU *lu = (PC_ILU*)pc->data; 152401956bSBarry Smith 162401956bSBarry Smith PetscFunctionBegin; 172401956bSBarry Smith lu->reusefill = flag; 182401956bSBarry Smith PetscFunctionReturn(0); 192401956bSBarry Smith } 202401956bSBarry Smith EXTERN_C_END 212401956bSBarry Smith 222401956bSBarry Smith EXTERN_C_BEGIN 232401956bSBarry Smith #undef __FUNCT__ 242401956bSBarry Smith #define __FUNCT__ "PCFactorReorderForNonzeroDiagonal_ILU" 252401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorReorderForNonzeroDiagonal_ILU(PC pc,PetscReal z) 269b54502bSHong Zhang { 279b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 289b54502bSHong Zhang 299b54502bSHong Zhang PetscFunctionBegin; 309b54502bSHong Zhang ilu->nonzerosalongdiagonal = PETSC_TRUE; 319b54502bSHong Zhang if (z == PETSC_DECIDE) { 329b54502bSHong Zhang ilu->nonzerosalongdiagonaltol = 1.e-10; 339b54502bSHong Zhang } else { 349b54502bSHong Zhang ilu->nonzerosalongdiagonaltol = z; 359b54502bSHong Zhang } 369b54502bSHong Zhang PetscFunctionReturn(0); 379b54502bSHong Zhang } 389b54502bSHong Zhang EXTERN_C_END 399b54502bSHong Zhang 409b54502bSHong Zhang #undef __FUNCT__ 419b54502bSHong Zhang #define __FUNCT__ "PCDestroy_ILU_Internal" 429b54502bSHong Zhang PetscErrorCode PCDestroy_ILU_Internal(PC pc) 439b54502bSHong Zhang { 449b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 459b54502bSHong Zhang PetscErrorCode ierr; 469b54502bSHong Zhang 479b54502bSHong Zhang PetscFunctionBegin; 48075768bcSBarry Smith if (!ilu->inplace && ((PC_Factor*)ilu)->fact) {ierr = MatDestroy(((PC_Factor*)ilu)->fact);CHKERRQ(ierr);} 499b54502bSHong Zhang if (ilu->row && ilu->col && ilu->row != ilu->col) {ierr = ISDestroy(ilu->row);CHKERRQ(ierr);} 509b54502bSHong Zhang if (ilu->col) {ierr = ISDestroy(ilu->col);CHKERRQ(ierr);} 519b54502bSHong Zhang PetscFunctionReturn(0); 529b54502bSHong Zhang } 539b54502bSHong Zhang 549b54502bSHong Zhang EXTERN_C_BEGIN 559b54502bSHong Zhang #undef __FUNCT__ 562401956bSBarry Smith #define __FUNCT__ "PCFactorSetUseDropTolerance_ILU" 572401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorSetUseDropTolerance_ILU(PC pc,PetscReal dt,PetscReal dtcol,PetscInt dtcount) 589b54502bSHong Zhang { 59075768bcSBarry Smith PC_ILU *ilu = (PC_ILU*)pc->data; 609b54502bSHong Zhang PetscErrorCode ierr; 619b54502bSHong Zhang 629b54502bSHong Zhang PetscFunctionBegin; 63075768bcSBarry Smith if (pc->setupcalled && (!ilu->usedt || ((PC_Factor*)ilu)->info.dt != dt || ((PC_Factor*)ilu)->info.dtcol != dtcol || ((PC_Factor*)ilu)->info.dtcount != dtcount)) { 649b54502bSHong Zhang pc->setupcalled = 0; 659b54502bSHong Zhang ierr = PCDestroy_ILU_Internal(pc);CHKERRQ(ierr); 669b54502bSHong Zhang } 679b54502bSHong Zhang ilu->usedt = PETSC_TRUE; 68075768bcSBarry Smith ((PC_Factor*)ilu)->info.dt = dt; 69075768bcSBarry Smith ((PC_Factor*)ilu)->info.dtcol = dtcol; 70075768bcSBarry Smith ((PC_Factor*)ilu)->info.dtcount = dtcount; 71075768bcSBarry Smith ((PC_Factor*)ilu)->info.fill = PETSC_DEFAULT; 729b54502bSHong Zhang PetscFunctionReturn(0); 739b54502bSHong Zhang } 749b54502bSHong Zhang EXTERN_C_END 759b54502bSHong Zhang 769b54502bSHong Zhang EXTERN_C_BEGIN 779b54502bSHong Zhang #undef __FUNCT__ 782401956bSBarry Smith #define __FUNCT__ "PCFactorSetReuseOrdering_ILU" 792401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorSetReuseOrdering_ILU(PC pc,PetscTruth flag) 809b54502bSHong Zhang { 81075768bcSBarry Smith PC_ILU *ilu = (PC_ILU*)pc->data; 829b54502bSHong Zhang 839b54502bSHong Zhang PetscFunctionBegin; 849b54502bSHong Zhang ilu->reuseordering = flag; 859b54502bSHong Zhang PetscFunctionReturn(0); 869b54502bSHong Zhang } 879b54502bSHong Zhang EXTERN_C_END 889b54502bSHong Zhang 899b54502bSHong Zhang EXTERN_C_BEGIN 909b54502bSHong Zhang #undef __FUNCT__ 912401956bSBarry Smith #define __FUNCT__ "PCFactorSetUseInPlace_ILU" 922401956bSBarry Smith PetscErrorCode PETSCKSP_DLLEXPORT PCFactorSetUseInPlace_ILU(PC pc) 939b54502bSHong Zhang { 94075768bcSBarry Smith PC_ILU *dir = (PC_ILU*)pc->data; 959b54502bSHong Zhang 969b54502bSHong Zhang PetscFunctionBegin; 979b54502bSHong Zhang dir->inplace = PETSC_TRUE; 989b54502bSHong Zhang PetscFunctionReturn(0); 999b54502bSHong Zhang } 1009b54502bSHong Zhang EXTERN_C_END 1019b54502bSHong Zhang 1029b54502bSHong Zhang #undef __FUNCT__ 1039b54502bSHong Zhang #define __FUNCT__ "PCSetFromOptions_ILU" 1049b54502bSHong Zhang static PetscErrorCode PCSetFromOptions_ILU(PC pc) 1059b54502bSHong Zhang { 1069b54502bSHong Zhang PetscErrorCode ierr; 1079b54502bSHong Zhang PetscInt dtmax = 3,itmp; 1088ff23777SHong Zhang PetscTruth flg; 1099b54502bSHong Zhang PetscReal dt[3]; 1109b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 1119b54502bSHong Zhang PetscReal tol; 1129b54502bSHong Zhang 1139b54502bSHong Zhang PetscFunctionBegin; 1149b54502bSHong Zhang ierr = PetscOptionsHead("ILU Options");CHKERRQ(ierr); 1158ff23777SHong Zhang ierr = PCSetFromOptions_Factor(pc);CHKERRQ(ierr); 1168ff23777SHong Zhang 117075768bcSBarry Smith ierr = PetscOptionsInt("-pc_factor_levels","levels of fill","PCFactorSetLevels",(PetscInt)((PC_Factor*)ilu)->info.levels,&itmp,&flg);CHKERRQ(ierr); 118075768bcSBarry Smith if (flg) ((PC_Factor*)ilu)->info.levels = itmp; 11990d69ab7SBarry Smith flg = PETSC_FALSE; 12090d69ab7SBarry Smith ierr = PetscOptionsTruth("-pc_factor_diagonal_fill","Allow fill into empty diagonal entry","PCFactorSetAllowDiagonalFill",flg,&flg,PETSC_NULL);CHKERRQ(ierr); 121075768bcSBarry Smith ((PC_Factor*)ilu)->info.diagonal_fill = (double) flg; 1229b54502bSHong Zhang 123075768bcSBarry Smith dt[0] = ((PC_Factor*)ilu)->info.dt; 124075768bcSBarry Smith dt[1] = ((PC_Factor*)ilu)->info.dtcol; 125075768bcSBarry Smith dt[2] = ((PC_Factor*)ilu)->info.dtcount; 1262401956bSBarry Smith ierr = PetscOptionsRealArray("-pc_factor_use_drop_tolerance","<dt,dtcol,maxrowcount>","PCFactorSetUseDropTolerance",dt,&dtmax,&flg);CHKERRQ(ierr); 1279b54502bSHong Zhang if (flg) { 1282401956bSBarry Smith ierr = PCFactorSetUseDropTolerance(pc,dt[0],dt[1],(PetscInt)dt[2]);CHKERRQ(ierr); 1299b54502bSHong Zhang } 1308ff23777SHong Zhang 1312401956bSBarry Smith ierr = PetscOptionsName("-pc_factor_nonzeros_along_diagonal","Reorder to remove zeros from diagonal","PCFactorReorderForNonzeroDiagonal",&flg);CHKERRQ(ierr); 1329b54502bSHong Zhang if (flg) { 1339b54502bSHong Zhang tol = PETSC_DECIDE; 1342401956bSBarry Smith ierr = PetscOptionsReal("-pc_factor_nonzeros_along_diagonal","Reorder to remove zeros from diagonal","PCFactorReorderForNonzeroDiagonal",ilu->nonzerosalongdiagonaltol,&tol,0);CHKERRQ(ierr); 1352401956bSBarry Smith ierr = PCFactorReorderForNonzeroDiagonal(pc,tol);CHKERRQ(ierr); 1369b54502bSHong Zhang } 1379b54502bSHong Zhang 1389b54502bSHong Zhang ierr = PetscOptionsTail();CHKERRQ(ierr); 1399b54502bSHong Zhang PetscFunctionReturn(0); 1409b54502bSHong Zhang } 1419b54502bSHong Zhang 1429b54502bSHong Zhang #undef __FUNCT__ 1439b54502bSHong Zhang #define __FUNCT__ "PCView_ILU" 1449b54502bSHong Zhang static PetscErrorCode PCView_ILU(PC pc,PetscViewer viewer) 1459b54502bSHong Zhang { 1469b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 1479b54502bSHong Zhang PetscErrorCode ierr; 1489b54502bSHong Zhang PetscTruth isstring,iascii; 1499b54502bSHong Zhang 1509b54502bSHong Zhang PetscFunctionBegin; 1519b54502bSHong Zhang ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_STRING,&isstring);CHKERRQ(ierr); 1529b54502bSHong Zhang ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&iascii);CHKERRQ(ierr); 1539b54502bSHong Zhang if (iascii) { 1549b54502bSHong Zhang if (ilu->usedt) { 155075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: drop tolerance %G\n",((PC_Factor*)ilu)->info.dt);CHKERRQ(ierr); 156075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: max nonzeros per row %D\n",(PetscInt)((PC_Factor*)ilu)->info.dtcount);CHKERRQ(ierr); 157075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: column permutation tolerance %G\n",((PC_Factor*)ilu)->info.dtcol);CHKERRQ(ierr); 158075768bcSBarry Smith } else if (((PC_Factor*)ilu)->info.levels == 1) { 159075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: %D level of fill\n",(PetscInt)((PC_Factor*)ilu)->info.levels);CHKERRQ(ierr); 1609b54502bSHong Zhang } else { 161075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: %D levels of fill\n",(PetscInt)((PC_Factor*)ilu)->info.levels);CHKERRQ(ierr); 1629b54502bSHong Zhang } 163075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: factor fill ratio allocated %G\n",((PC_Factor*)ilu)->info.fill);CHKERRQ(ierr); 164075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: tolerance for zero pivot %G\n",((PC_Factor*)ilu)->info.zeropivot);CHKERRQ(ierr); 165075768bcSBarry Smith if (((PC_Factor*)ilu)->info.shiftpd) {ierr = PetscViewerASCIIPrintf(viewer," ILU: using Manteuffel shift\n");CHKERRQ(ierr);} 166075768bcSBarry Smith if (((PC_Factor*)ilu)->info.shiftnz) {ierr = PetscViewerASCIIPrintf(viewer," ILU: using diagonal shift to prevent zero pivot\n");CHKERRQ(ierr);} 167075768bcSBarry Smith if (((PC_Factor*)ilu)->info.shiftinblocks) {ierr = PetscViewerASCIIPrintf(viewer," ILU: using diagonal shift on blocks to prevent zero pivot\n");CHKERRQ(ierr);} 1689b54502bSHong Zhang if (ilu->inplace) {ierr = PetscViewerASCIIPrintf(viewer," in-place factorization\n");CHKERRQ(ierr);} 1699b54502bSHong Zhang else {ierr = PetscViewerASCIIPrintf(viewer," out-of-place factorization\n");CHKERRQ(ierr);} 170075768bcSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," matrix ordering: %s\n",((PC_Factor*)ilu)->ordering);CHKERRQ(ierr); 1719b54502bSHong Zhang if (ilu->reusefill) {ierr = PetscViewerASCIIPrintf(viewer," Reusing fill from past factorization\n");CHKERRQ(ierr);} 1729b54502bSHong Zhang if (ilu->reuseordering) {ierr = PetscViewerASCIIPrintf(viewer," Reusing reordering from past factorization\n");CHKERRQ(ierr);} 173075768bcSBarry Smith if (((PC_Factor*)ilu)->fact) { 174f3a39becSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," ILU: factor fill ratio needed %G\n",ilu->actualfill);CHKERRQ(ierr); 1759b54502bSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Factored matrix follows\n");CHKERRQ(ierr); 1769b54502bSHong Zhang ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 177f3a39becSBarry Smith ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 178f3a39becSBarry Smith ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 1799b54502bSHong Zhang ierr = PetscViewerPushFormat(viewer,PETSC_VIEWER_ASCII_INFO);CHKERRQ(ierr); 180075768bcSBarry Smith ierr = MatView(((PC_Factor*)ilu)->fact,viewer);CHKERRQ(ierr); 1819b54502bSHong Zhang ierr = PetscViewerPopFormat(viewer);CHKERRQ(ierr); 1829b54502bSHong Zhang ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 183f3a39becSBarry Smith ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 184f3a39becSBarry Smith ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 1859b54502bSHong Zhang } 1869b54502bSHong Zhang } else if (isstring) { 187075768bcSBarry Smith ierr = PetscViewerStringSPrintf(viewer," lvls=%D,order=%s",(PetscInt)((PC_Factor*)ilu)->info.levels,((PC_Factor*)ilu)->ordering);CHKERRQ(ierr);CHKERRQ(ierr); 1889b54502bSHong Zhang } else { 1899b54502bSHong Zhang SETERRQ1(PETSC_ERR_SUP,"Viewer type %s not supported for PCILU",((PetscObject)viewer)->type_name); 1909b54502bSHong Zhang } 1919b54502bSHong Zhang PetscFunctionReturn(0); 1929b54502bSHong Zhang } 1939b54502bSHong Zhang 1949b54502bSHong Zhang #undef __FUNCT__ 1959b54502bSHong Zhang #define __FUNCT__ "PCSetUp_ILU" 1969b54502bSHong Zhang static PetscErrorCode PCSetUp_ILU(PC pc) 1979b54502bSHong Zhang { 1989b54502bSHong Zhang PetscErrorCode ierr; 1999b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 200f3a39becSBarry Smith MatInfo info; 2019b54502bSHong Zhang 2029b54502bSHong Zhang PetscFunctionBegin; 2039b54502bSHong Zhang if (ilu->inplace) { 204075768bcSBarry Smith CHKMEMQ; 2059b54502bSHong Zhang if (!pc->setupcalled) { 2069b54502bSHong Zhang 2079b54502bSHong Zhang /* In-place factorization only makes sense with the natural ordering, 2089b54502bSHong Zhang so we only need to get the ordering once, even if nonzero structure changes */ 209075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 210efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 211efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 2129b54502bSHong Zhang } 2139b54502bSHong Zhang 2149b54502bSHong Zhang /* In place ILU only makes sense with fill factor of 1.0 because 2159b54502bSHong Zhang cannot have levels of fill */ 216075768bcSBarry Smith ((PC_Factor*)ilu)->info.fill = 1.0; 217075768bcSBarry Smith ((PC_Factor*)ilu)->info.diagonal_fill = 0; 218075768bcSBarry Smith ierr = MatILUFactor(pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 219075768bcSBarry Smith CHKMEMQ; 220075768bcSBarry Smith ((PC_Factor*)ilu)->fact = pc->pmat; 2219b54502bSHong Zhang } else if (ilu->usedt) { 2229b54502bSHong Zhang if (!pc->setupcalled) { 223075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 224075768bcSBarry Smith CHKMEMQ; 2251da05e5aSHong Zhang ierr = MatGetFactor(pc->pmat,MAT_SOLVER_PETSC,MAT_FACTOR_ILUDT,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 226efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 227efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 228075768bcSBarry Smith ierr = MatILUDTFactor(pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 229075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 2309b54502bSHong Zhang } else if (pc->flag != SAME_NONZERO_PATTERN) { 231075768bcSBarry Smith CHKMEMQ; 232075768bcSBarry Smith ierr = MatDestroy(((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 233075768bcSBarry Smith CHKMEMQ; 2349b54502bSHong Zhang if (!ilu->reuseordering) { 2359b54502bSHong Zhang if (ilu->row) {ierr = ISDestroy(ilu->row);CHKERRQ(ierr);} 2369b54502bSHong Zhang if (ilu->col) {ierr = ISDestroy(ilu->col);CHKERRQ(ierr);} 237075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 238efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 239efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 2409b54502bSHong Zhang } 241b78a477dSHong Zhang ierr = MatGetFactor(pc->pmat,MAT_SOLVER_PETSC,MAT_FACTOR_ILUDT,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 242075768bcSBarry Smith ierr = MatILUDTFactor(pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 243075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 2449b54502bSHong Zhang } else if (!ilu->reusefill) { 245075768bcSBarry Smith ierr = MatDestroy(((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 246b78a477dSHong Zhang ierr = MatGetFactor(pc->pmat,MAT_SOLVER_PETSC,MAT_FACTOR_ILUDT,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 247075768bcSBarry Smith ierr = MatILUDTFactor(pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 248075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 2499b54502bSHong Zhang } else { 250075768bcSBarry Smith ierr = MatLUFactorNumeric(((PC_Factor*)ilu)->fact,pc->pmat,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 2519b54502bSHong Zhang } 2529b54502bSHong Zhang } else { 2539b54502bSHong Zhang if (!pc->setupcalled) { 2549b54502bSHong Zhang /* first time in so compute reordering and symbolic factorization */ 255075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 256efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 257efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 2589b54502bSHong Zhang /* Remove zeros along diagonal? */ 2599b54502bSHong Zhang if (ilu->nonzerosalongdiagonal) { 2609b54502bSHong Zhang ierr = MatReorderForNonzeroDiagonal(pc->pmat,ilu->nonzerosalongdiagonaltol,ilu->row,ilu->col);CHKERRQ(ierr); 2619b54502bSHong Zhang } 262075768bcSBarry Smith CHKMEMQ; 26311bfe483SHong Zhang ierr = MatGetFactor(pc->pmat,((PC_Factor*)ilu)->solvertype,MAT_FACTOR_ILU,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 264075768bcSBarry Smith CHKMEMQ; 265075768bcSBarry Smith ierr = MatILUFactorSymbolic(((PC_Factor*)ilu)->fact,pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 266075768bcSBarry Smith ierr = MatGetInfo(((PC_Factor*)ilu)->fact,MAT_LOCAL,&info);CHKERRQ(ierr); 267f3a39becSBarry Smith ilu->actualfill = info.fill_ratio_needed; 268075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 2699b54502bSHong Zhang } else if (pc->flag != SAME_NONZERO_PATTERN) { 2709b54502bSHong Zhang if (!ilu->reuseordering) { 2719b54502bSHong Zhang /* compute a new ordering for the ILU */ 2729b54502bSHong Zhang ierr = ISDestroy(ilu->row);CHKERRQ(ierr); 2739b54502bSHong Zhang ierr = ISDestroy(ilu->col);CHKERRQ(ierr); 274075768bcSBarry Smith ierr = MatGetOrdering(pc->pmat,((PC_Factor*)ilu)->ordering,&ilu->row,&ilu->col);CHKERRQ(ierr); 275efee365bSSatish Balay if (ilu->row) {ierr = PetscLogObjectParent(pc,ilu->row);CHKERRQ(ierr);} 276efee365bSSatish Balay if (ilu->col) {ierr = PetscLogObjectParent(pc,ilu->col);CHKERRQ(ierr);} 2779b54502bSHong Zhang /* Remove zeros along diagonal? */ 2789b54502bSHong Zhang if (ilu->nonzerosalongdiagonal) { 2799b54502bSHong Zhang ierr = MatReorderForNonzeroDiagonal(pc->pmat,ilu->nonzerosalongdiagonaltol,ilu->row,ilu->col);CHKERRQ(ierr); 2809b54502bSHong Zhang } 2819b54502bSHong Zhang } 282075768bcSBarry Smith ierr = MatDestroy(((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 283075768bcSBarry Smith ierr = MatGetFactor(pc->pmat,MAT_SOLVER_PETSC,MAT_FACTOR_ILU,&((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 284075768bcSBarry Smith ierr = MatILUFactorSymbolic(((PC_Factor*)ilu)->fact,pc->pmat,ilu->row,ilu->col,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 285075768bcSBarry Smith ierr = MatGetInfo(((PC_Factor*)ilu)->fact,MAT_LOCAL,&info);CHKERRQ(ierr); 286f3a39becSBarry Smith ilu->actualfill = info.fill_ratio_needed; 287075768bcSBarry Smith ierr = PetscLogObjectParent(pc,((PC_Factor*)ilu)->fact);CHKERRQ(ierr); 2889b54502bSHong Zhang } 289075768bcSBarry Smith CHKMEMQ; 290075768bcSBarry Smith ierr = MatLUFactorNumeric(((PC_Factor*)ilu)->fact,pc->pmat,&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 291075768bcSBarry Smith CHKMEMQ; 2929b54502bSHong Zhang } 2939b54502bSHong Zhang PetscFunctionReturn(0); 2949b54502bSHong Zhang } 2959b54502bSHong Zhang 2969b54502bSHong Zhang #undef __FUNCT__ 2979b54502bSHong Zhang #define __FUNCT__ "PCDestroy_ILU" 2989b54502bSHong Zhang static PetscErrorCode PCDestroy_ILU(PC pc) 2999b54502bSHong Zhang { 3009b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 3019b54502bSHong Zhang PetscErrorCode ierr; 3029b54502bSHong Zhang 3039b54502bSHong Zhang PetscFunctionBegin; 3049b54502bSHong Zhang ierr = PCDestroy_ILU_Internal(pc);CHKERRQ(ierr); 30562ba1fd3SLisandro Dalcin ierr = PetscStrfree(((PC_Factor*)ilu)->solvertype);CHKERRQ(ierr); 306075768bcSBarry Smith ierr = PetscStrfree(((PC_Factor*)ilu)->ordering);CHKERRQ(ierr); 3079b54502bSHong Zhang ierr = PetscFree(ilu);CHKERRQ(ierr); 3089b54502bSHong Zhang PetscFunctionReturn(0); 3099b54502bSHong Zhang } 3109b54502bSHong Zhang 3119b54502bSHong Zhang #undef __FUNCT__ 3129b54502bSHong Zhang #define __FUNCT__ "PCApply_ILU" 3139b54502bSHong Zhang static PetscErrorCode PCApply_ILU(PC pc,Vec x,Vec y) 3149b54502bSHong Zhang { 3159b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 3169b54502bSHong Zhang PetscErrorCode ierr; 3179b54502bSHong Zhang 3189b54502bSHong Zhang PetscFunctionBegin; 319075768bcSBarry Smith ierr = MatSolve(((PC_Factor*)ilu)->fact,x,y);CHKERRQ(ierr); 3209b54502bSHong Zhang PetscFunctionReturn(0); 3219b54502bSHong Zhang } 3229b54502bSHong Zhang 3239b54502bSHong Zhang #undef __FUNCT__ 3249b54502bSHong Zhang #define __FUNCT__ "PCApplyTranspose_ILU" 3259b54502bSHong Zhang static PetscErrorCode PCApplyTranspose_ILU(PC pc,Vec x,Vec y) 3269b54502bSHong Zhang { 3279b54502bSHong Zhang PC_ILU *ilu = (PC_ILU*)pc->data; 3289b54502bSHong Zhang PetscErrorCode ierr; 3299b54502bSHong Zhang 3309b54502bSHong Zhang PetscFunctionBegin; 331075768bcSBarry Smith ierr = MatSolveTranspose(((PC_Factor*)ilu)->fact,x,y);CHKERRQ(ierr); 3329b54502bSHong Zhang PetscFunctionReturn(0); 3339b54502bSHong Zhang } 3349b54502bSHong Zhang 3359b54502bSHong Zhang /*MC 3369b54502bSHong Zhang PCILU - Incomplete factorization preconditioners. 3379b54502bSHong Zhang 3389b54502bSHong Zhang Options Database Keys: 3392401956bSBarry Smith + -pc_factor_levels <k> - number of levels of fill for ILU(k) 3402401956bSBarry Smith . -pc_factor_in_place - only for ILU(0) with natural ordering, reuses the space of the matrix for 3419b54502bSHong Zhang its factorization (overwrites original matrix) 3422401956bSBarry Smith . -pc_factor_diagonal_fill - fill in a zero diagonal even if levels of fill indicate it wouldn't be fill 3432401956bSBarry Smith . -pc_factor_reuse_ordering - reuse ordering of factorized matrix from previous factorization 3442401956bSBarry Smith . -pc_factor_use_drop_tolerance <dt,dtcol,maxrowcount> - use Saad's drop tolerance ILUdt 34555ba2a51SBarry Smith . -pc_factor_fill <nfill> - expected amount of fill in factored matrix compared to original matrix, nfill > 1 3462401956bSBarry Smith . -pc_factor_nonzeros_along_diagonal - reorder the matrix before factorization to remove zeros from the diagonal, 3479b54502bSHong Zhang this decreases the chance of getting a zero pivot 3482401956bSBarry Smith . -pc_factor_mat_ordering_type <natural,nd,1wd,rcm,qmd> - set the row/column ordering of the factored matrix 3492401956bSBarry Smith . -pc_factor_pivot_in_blocks - for block ILU(k) factorization, i.e. with BAIJ matrices with block size larger 3509b54502bSHong Zhang than 1 the diagonal blocks are factored with partial pivoting (this increases the 3519b54502bSHong Zhang stability of the ILU factorization 35262bba022SBarry Smith . -pc_factor_shift_in_blocks - adds a small diagonal to any block if it is singular during ILU factorization 353f251bdbdSHong Zhang . -pc_factor_shift_nonzero <shift> - Sets shift amount or PETSC_DECIDE for the default 35453ae6812SBarry Smith - -pc_factor_shift_positive_definite true or false - Activate/Deactivate PCFactorSetShiftPd(); the value 35553ae6812SBarry Smith is optional with true being the default 3569b54502bSHong Zhang 3579b54502bSHong Zhang Level: beginner 3589b54502bSHong Zhang 3599b54502bSHong Zhang Concepts: incomplete factorization 3609b54502bSHong Zhang 361*d9ba8547SBarry Smith Notes: Only implemented for some matrix formats. (for parallel see PCHYPRE for hypre's ILU) 3629b54502bSHong Zhang 3639b54502bSHong Zhang For BAIJ matrices this implements a point block ILU 3649b54502bSHong Zhang 365c582cd25SBarry Smith References: 366c582cd25SBarry Smith T. Dupont, R. Kendall, and H. Rachford. An approximate factorization procedure for solving 367c582cd25SBarry Smith self-adjoint elliptic difference equations. SIAM J. Numer. Anal., 5:559--573, 1968. 368c582cd25SBarry Smith 369c582cd25SBarry Smith T.A. Oliphant. An implicit numerical method for solving two-dimensional time-dependent dif- 370c582cd25SBarry Smith fusion problems. Quart. Appl. Math., 19:221--229, 1961. 371c582cd25SBarry Smith 372c582cd25SBarry Smith Review article: APPROXIMATE AND INCOMPLETE FACTORIZATIONS, TONY F. CHAN AND HENK A. VAN DER VORST 373c582cd25SBarry Smith http://igitur-archive.library.uu.nl/math/2001-0621-115821/proc.pdf chapter in Parallel Numerical 374c582cd25SBarry Smith Algorithms, edited by D. Keyes, A. Semah, V. Venkatakrishnan, ICASE/LaRC Interdisciplinary Series in 375c582cd25SBarry Smith Science and Engineering, Kluwer, pp. 167--202. 376c582cd25SBarry Smith 377c582cd25SBarry Smith 3789b54502bSHong Zhang .seealso: PCCreate(), PCSetType(), PCType (for list of available types), PC, PCSOR, MatOrderingType, 3798ff23777SHong Zhang PCFactorSetZeroPivot(), PCFactorSetShiftNonzero(), PCFactorSetShiftPd(), PCFactorSetShiftInBlocks(), 3808ff23777SHong Zhang PCFactorSetUseDropTolerance(),PCFactorSetFill(), PCFactorSetMatOrderingType(), PCFactorSetReuseOrdering(), 3818ff23777SHong Zhang PCFactorSetLevels(), PCFactorSetUseInPlace(), PCFactorSetAllowDiagonalFill(), PCFactorSetPivotInBlocks() 3829b54502bSHong Zhang 3839b54502bSHong Zhang M*/ 3849b54502bSHong Zhang 3859b54502bSHong Zhang EXTERN_C_BEGIN 3869b54502bSHong Zhang #undef __FUNCT__ 3879b54502bSHong Zhang #define __FUNCT__ "PCCreate_ILU" 388dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCCreate_ILU(PC pc) 3899b54502bSHong Zhang { 3909b54502bSHong Zhang PetscErrorCode ierr; 3919b54502bSHong Zhang PC_ILU *ilu; 3929b54502bSHong Zhang 3939b54502bSHong Zhang PetscFunctionBegin; 39438f2d2fdSLisandro Dalcin ierr = PetscNewLog(pc,PC_ILU,&ilu);CHKERRQ(ierr); 3959b54502bSHong Zhang 396075768bcSBarry Smith ((PC_Factor*)ilu)->fact = 0; 397075768bcSBarry Smith ierr = MatFactorInfoInitialize(&((PC_Factor*)ilu)->info);CHKERRQ(ierr); 398075768bcSBarry Smith ((PC_Factor*)ilu)->info.levels = 0; 399075768bcSBarry Smith ((PC_Factor*)ilu)->info.fill = 1.0; 4009b54502bSHong Zhang ilu->col = 0; 4019b54502bSHong Zhang ilu->row = 0; 4029b54502bSHong Zhang ilu->inplace = PETSC_FALSE; 40311bfe483SHong Zhang ierr = PetscStrallocpy(MAT_SOLVER_PETSC,&((PC_Factor*)ilu)->solvertype);CHKERRQ(ierr); 404075768bcSBarry Smith ierr = PetscStrallocpy(MATORDERING_NATURAL,&((PC_Factor*)ilu)->ordering);CHKERRQ(ierr); 4059b54502bSHong Zhang ilu->reuseordering = PETSC_FALSE; 4069b54502bSHong Zhang ilu->usedt = PETSC_FALSE; 407075768bcSBarry Smith ((PC_Factor*)ilu)->info.dt = PETSC_DEFAULT; 408075768bcSBarry Smith ((PC_Factor*)ilu)->info.dtcount = PETSC_DEFAULT; 409075768bcSBarry Smith ((PC_Factor*)ilu)->info.dtcol = PETSC_DEFAULT; 410075768bcSBarry Smith ((PC_Factor*)ilu)->info.shiftnz = 1.e-12; 411075768bcSBarry Smith ((PC_Factor*)ilu)->info.shiftpd = 0.0; /* false */ 412075768bcSBarry Smith ((PC_Factor*)ilu)->info.zeropivot = 1.e-12; 413075768bcSBarry Smith ((PC_Factor*)ilu)->info.pivotinblocks = 1.0; 414075768bcSBarry Smith ((PC_Factor*)ilu)->info.shiftinblocks = 1.e-12; 4159b54502bSHong Zhang ilu->reusefill = PETSC_FALSE; 416075768bcSBarry Smith ((PC_Factor*)ilu)->info.diagonal_fill = 0; 4179b54502bSHong Zhang pc->data = (void*)ilu; 4189b54502bSHong Zhang 4199b54502bSHong Zhang pc->ops->destroy = PCDestroy_ILU; 4209b54502bSHong Zhang pc->ops->apply = PCApply_ILU; 4219b54502bSHong Zhang pc->ops->applytranspose = PCApplyTranspose_ILU; 4229b54502bSHong Zhang pc->ops->setup = PCSetUp_ILU; 4239b54502bSHong Zhang pc->ops->setfromoptions = PCSetFromOptions_ILU; 42485317021SBarry Smith pc->ops->getfactoredmatrix = PCFactorGetMatrix_Factor; 4259b54502bSHong Zhang pc->ops->view = PCView_ILU; 4269b54502bSHong Zhang pc->ops->applyrichardson = 0; 4279b54502bSHong Zhang 42885317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetZeroPivot_C","PCFactorSetZeroPivot_Factor", 42985317021SBarry Smith PCFactorSetZeroPivot_Factor);CHKERRQ(ierr); 43085317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetShiftNonzero_C","PCFactorSetShiftNonzero_Factor", 43185317021SBarry Smith PCFactorSetShiftNonzero_Factor);CHKERRQ(ierr); 43285317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetShiftPd_C","PCFactorSetShiftPd_Factor", 43385317021SBarry Smith PCFactorSetShiftPd_Factor);CHKERRQ(ierr); 4348ff23777SHong Zhang ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetShiftInBlocks_C","PCFactorSetShiftInBlocks_Factor", 4358ff23777SHong Zhang PCFactorSetShiftInBlocks_Factor);CHKERRQ(ierr); 436afaefe49SHong Zhang 4377112b564SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorGetMatSolverPackage_C","PCFactorGetMatSolverPackage_Factor", 4387112b564SBarry Smith PCFactorGetMatSolverPackage_Factor);CHKERRQ(ierr); 43911bfe483SHong Zhang ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetMatSolverPackage_C","PCFactorSetMatSolverPackage_Factor", 44011bfe483SHong Zhang PCFactorSetMatSolverPackage_Factor);CHKERRQ(ierr); 4412401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetUseDropTolerance_C","PCFactorSetUseDropTolerance_ILU", 4422401956bSBarry Smith PCFactorSetUseDropTolerance_ILU);CHKERRQ(ierr); 44385317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetFill_C","PCFactorSetFill_Factor", 44485317021SBarry Smith PCFactorSetFill_Factor);CHKERRQ(ierr); 44585317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetMatOrderingType_C","PCFactorSetMatOrderingType_Factor", 44685317021SBarry Smith PCFactorSetMatOrderingType_Factor);CHKERRQ(ierr); 4472401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetReuseOrdering_C","PCFactorSetReuseOrdering_ILU", 4482401956bSBarry Smith PCFactorSetReuseOrdering_ILU);CHKERRQ(ierr); 4492401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetReuseFill_C","PCFactorSetReuseFill_ILU", 4502401956bSBarry Smith PCFactorSetReuseFill_ILU);CHKERRQ(ierr); 45185317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetLevels_C","PCFactorSetLevels_Factor", 45285317021SBarry Smith PCFactorSetLevels_Factor);CHKERRQ(ierr); 4532401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetUseInPlace_C","PCFactorSetUseInPlace_ILU", 4542401956bSBarry Smith PCFactorSetUseInPlace_ILU);CHKERRQ(ierr); 45585317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetAllowDiagonalFill_C","PCFactorSetAllowDiagonalFill_Factor", 45685317021SBarry Smith PCFactorSetAllowDiagonalFill_Factor);CHKERRQ(ierr); 45785317021SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorSetPivotInBlocks_C","PCFactorSetPivotInBlocks_Factor", 45885317021SBarry Smith PCFactorSetPivotInBlocks_Factor);CHKERRQ(ierr); 4592401956bSBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCFactorReorderForNonzeroDiagonal_C","PCFactorReorderForNonzeroDiagonal_ILU", 4602401956bSBarry Smith PCFactorReorderForNonzeroDiagonal_ILU);CHKERRQ(ierr); 4619b54502bSHong Zhang PetscFunctionReturn(0); 4629b54502bSHong Zhang } 4639b54502bSHong Zhang EXTERN_C_END 464