1dba47a55SKris Buschelman 29b54502bSHong Zhang /* 39b54502bSHong Zhang Defines a direct factorization preconditioner for any Mat implementation 49b54502bSHong Zhang Note: this need not be consided a preconditioner since it supplies 59b54502bSHong Zhang a direct solver. 69b54502bSHong Zhang */ 7ee45ca4aSHong Zhang 8c6db04a5SJed Brown #include <../src/ksp/pc/impls/factor/lu/lu.h> /*I "petscpc.h" I*/ 99b54502bSHong Zhang 107087cfbeSBarry Smith PetscErrorCode PCFactorReorderForNonzeroDiagonal_LU(PC pc,PetscReal z) 119b54502bSHong Zhang { 129b54502bSHong Zhang PC_LU *lu = (PC_LU*)pc->data; 139b54502bSHong Zhang 149b54502bSHong Zhang PetscFunctionBegin; 159b54502bSHong Zhang lu->nonzerosalongdiagonal = PETSC_TRUE; 162fa5cd67SKarl Rupp if (z == PETSC_DECIDE) lu->nonzerosalongdiagonaltol = 1.e-10; 172fa5cd67SKarl Rupp else lu->nonzerosalongdiagonaltol = z; 189b54502bSHong Zhang PetscFunctionReturn(0); 199b54502bSHong Zhang } 209b54502bSHong Zhang 214416b707SBarry Smith static PetscErrorCode PCSetFromOptions_LU(PetscOptionItems *PetscOptionsObject,PC pc) 229b54502bSHong Zhang { 239b54502bSHong Zhang PC_LU *lu = (PC_LU*)pc->data; 24ace3abfcSBarry Smith PetscBool flg = PETSC_FALSE; 259b54502bSHong Zhang PetscReal tol; 269b54502bSHong Zhang 279b54502bSHong Zhang PetscFunctionBegin; 28d0609cedSBarry Smith PetscOptionsHeadBegin(PetscOptionsObject,"LU options"); 299566063dSJacob Faibussowitsch PetscCall(PCSetFromOptions_Factor(PetscOptionsObject,pc)); 305c9eb25fSBarry Smith 319566063dSJacob Faibussowitsch PetscCall(PetscOptionsName("-pc_factor_nonzeros_along_diagonal","Reorder to remove zeros from diagonal","PCFactorReorderForNonzeroDiagonal",&flg)); 329b54502bSHong Zhang if (flg) { 339b54502bSHong Zhang tol = PETSC_DECIDE; 349566063dSJacob Faibussowitsch PetscCall(PetscOptionsReal("-pc_factor_nonzeros_along_diagonal","Reorder to remove zeros from diagonal","PCFactorReorderForNonzeroDiagonal",lu->nonzerosalongdiagonaltol,&tol,NULL)); 359566063dSJacob Faibussowitsch PetscCall(PCFactorReorderForNonzeroDiagonal(pc,tol)); 369b54502bSHong Zhang } 37d0609cedSBarry Smith PetscOptionsHeadEnd(); 389b54502bSHong Zhang PetscFunctionReturn(0); 399b54502bSHong Zhang } 409b54502bSHong Zhang 419b54502bSHong Zhang static PetscErrorCode PCSetUp_LU(PC pc) 429b54502bSHong Zhang { 439b54502bSHong Zhang PC_LU *dir = (PC_LU*)pc->data; 44ea799195SBarry Smith MatSolverType stype; 4500e125f8SBarry Smith MatFactorError err; 46f023e1d5SPierre Jolivet const char *prefix; 473d1c1ea0SBarry Smith 489b54502bSHong Zhang PetscFunctionBegin; 49c6e4fdc6SHong Zhang pc->failedreason = PC_NOERROR; 503d1c1ea0SBarry Smith if (dir->hdr.reusefill && pc->setupcalled) ((PC_Factor*)dir)->info.fill = dir->hdr.actualfill; 519b54502bSHong Zhang 52*26cc229bSBarry Smith PetscCall(PCGetOptionsPrefix(pc,&prefix)); 53*26cc229bSBarry Smith PetscCall(MatSetOptionsPrefixFactor(pc->pmat,prefix)); 54*26cc229bSBarry Smith 559566063dSJacob Faibussowitsch PetscCall(MatSetErrorIfFailure(pc->pmat,pc->erroriffailure)); 563d1c1ea0SBarry Smith if (dir->hdr.inplace) { 579d76b4d0SMatthew G. Knepley MatFactorType ftype; 589d76b4d0SMatthew G. Knepley 599566063dSJacob Faibussowitsch PetscCall(MatGetFactorType(pc->pmat, &ftype)); 609d76b4d0SMatthew G. Knepley if (ftype == MAT_FACTOR_NONE) { 619566063dSJacob Faibussowitsch if (dir->row && dir->col && dir->row != dir->col) PetscCall(ISDestroy(&dir->row)); 629566063dSJacob Faibussowitsch PetscCall(ISDestroy(&dir->col)); 632c7c0729SBarry Smith /* This should only get the ordering if needed, but since MatGetFactor() is not called we can't know if it is needed */ 649566063dSJacob Faibussowitsch PetscCall(PCFactorSetDefaultOrdering_Factor(pc)); 659566063dSJacob Faibussowitsch PetscCall(MatGetOrdering(pc->pmat,((PC_Factor*)dir)->ordering,&dir->row,&dir->col)); 6603c60df9SBarry Smith if (dir->row) { 679566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)dir->row)); 689566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)dir->col)); 6903c60df9SBarry Smith } 709566063dSJacob Faibussowitsch PetscCall(MatLUFactor(pc->pmat,dir->row,dir->col,&((PC_Factor*)dir)->info)); 719566063dSJacob Faibussowitsch PetscCall(MatFactorGetError(pc->pmat,&err)); 7200e125f8SBarry Smith if (err) { /* Factor() fails */ 7300e125f8SBarry Smith pc->failedreason = (PCFailedReason)err; 746baea169SHong Zhang PetscFunctionReturn(0); 756baea169SHong Zhang } 769d76b4d0SMatthew G. Knepley } 77075768bcSBarry Smith ((PC_Factor*)dir)->fact = pc->pmat; 789b54502bSHong Zhang } else { 799b54502bSHong Zhang MatInfo info; 8000e125f8SBarry Smith 819b54502bSHong Zhang if (!pc->setupcalled) { 82f73b0415SBarry Smith PetscBool canuseordering; 832c7c0729SBarry Smith if (!((PC_Factor*)dir)->fact) { 849566063dSJacob Faibussowitsch PetscCall(MatGetFactor(pc->pmat,((PC_Factor*)dir)->solvertype,MAT_FACTOR_LU,&((PC_Factor*)dir)->fact)); 859566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)((PC_Factor*)dir)->fact)); 862c7c0729SBarry Smith } 879566063dSJacob Faibussowitsch PetscCall(MatFactorGetCanUseOrdering(((PC_Factor*)dir)->fact,&canuseordering)); 88f73b0415SBarry Smith if (canuseordering) { 899566063dSJacob Faibussowitsch PetscCall(PCFactorSetDefaultOrdering_Factor(pc)); 909566063dSJacob Faibussowitsch PetscCall(MatGetOrdering(pc->pmat,((PC_Factor*)dir)->ordering,&dir->row,&dir->col)); 919b54502bSHong Zhang if (dir->nonzerosalongdiagonal) { 929566063dSJacob Faibussowitsch PetscCall(MatReorderForNonzeroDiagonal(pc->pmat,dir->nonzerosalongdiagonaltol,dir->row,dir->col)); 939b54502bSHong Zhang } 949566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)dir->row)); 959566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)dir->col)); 9603c60df9SBarry Smith } 979566063dSJacob Faibussowitsch PetscCall(MatLUFactorSymbolic(((PC_Factor*)dir)->fact,pc->pmat,dir->row,dir->col,&((PC_Factor*)dir)->info)); 989566063dSJacob Faibussowitsch PetscCall(MatGetInfo(((PC_Factor*)dir)->fact,MAT_LOCAL,&info)); 993d1c1ea0SBarry Smith dir->hdr.actualfill = info.fill_ratio_needed; 1009b54502bSHong Zhang } else if (pc->flag != SAME_NONZERO_PATTERN) { 101f73b0415SBarry Smith PetscBool canuseordering; 1023d1c1ea0SBarry Smith if (!dir->hdr.reuseordering) { 1039566063dSJacob Faibussowitsch PetscCall(MatDestroy(&((PC_Factor*)dir)->fact)); 1049566063dSJacob Faibussowitsch PetscCall(MatGetFactor(pc->pmat,((PC_Factor*)dir)->solvertype,MAT_FACTOR_LU,&((PC_Factor*)dir)->fact)); 1059566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)((PC_Factor*)dir)->fact)); 1069566063dSJacob Faibussowitsch PetscCall(MatFactorGetCanUseOrdering(((PC_Factor*)dir)->fact,&canuseordering)); 107f73b0415SBarry Smith if (canuseordering) { 1089566063dSJacob Faibussowitsch if (dir->row && dir->col && dir->row != dir->col) PetscCall(ISDestroy(&dir->row)); 1099566063dSJacob Faibussowitsch PetscCall(ISDestroy(&dir->col)); 1109566063dSJacob Faibussowitsch PetscCall(PCFactorSetDefaultOrdering_Factor(pc)); 1119566063dSJacob Faibussowitsch PetscCall(MatGetOrdering(pc->pmat,((PC_Factor*)dir)->ordering,&dir->row,&dir->col)); 1129b54502bSHong Zhang if (dir->nonzerosalongdiagonal) { 1139566063dSJacob Faibussowitsch PetscCall(MatReorderForNonzeroDiagonal(pc->pmat,dir->nonzerosalongdiagonaltol,dir->row,dir->col)); 1149b54502bSHong Zhang } 1159566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)dir->row)); 1169566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)dir->col)); 11703c60df9SBarry Smith } 1189b54502bSHong Zhang } 1199566063dSJacob Faibussowitsch PetscCall(MatLUFactorSymbolic(((PC_Factor*)dir)->fact,pc->pmat,dir->row,dir->col,&((PC_Factor*)dir)->info)); 1209566063dSJacob Faibussowitsch PetscCall(MatGetInfo(((PC_Factor*)dir)->fact,MAT_LOCAL,&info)); 1213d1c1ea0SBarry Smith dir->hdr.actualfill = info.fill_ratio_needed; 12204545d6dSBarry Smith } else { 1239566063dSJacob Faibussowitsch PetscCall(MatFactorGetError(((PC_Factor*)dir)->fact,&err)); 124160a8794SBarry Smith if (err == MAT_FACTOR_NUMERIC_ZEROPIVOT) { 1259566063dSJacob Faibussowitsch PetscCall(MatFactorClearError(((PC_Factor*)dir)->fact)); 126b8b68cfdSBarry Smith pc->failedreason = PC_NOERROR; 12704545d6dSBarry Smith } 1289b54502bSHong Zhang } 1299566063dSJacob Faibussowitsch PetscCall(MatFactorGetError(((PC_Factor*)dir)->fact,&err)); 13000e125f8SBarry Smith if (err) { /* FactorSymbolic() fails */ 13100e125f8SBarry Smith pc->failedreason = (PCFailedReason)err; 1328c1cd74cSHong Zhang PetscFunctionReturn(0); 1338c1cd74cSHong Zhang } 1348c1cd74cSHong Zhang 1359566063dSJacob Faibussowitsch PetscCall(MatLUFactorNumeric(((PC_Factor*)dir)->fact,pc->pmat,&((PC_Factor*)dir)->info)); 1369566063dSJacob Faibussowitsch PetscCall(MatFactorGetError(((PC_Factor*)dir)->fact,&err)); 13700e125f8SBarry Smith if (err) { /* FactorNumeric() fails */ 13800e125f8SBarry Smith pc->failedreason = (PCFailedReason)err; 1398c1cd74cSHong Zhang } 140680c5173SHong Zhang 1419b54502bSHong Zhang } 14200c67f3bSHong Zhang 1439566063dSJacob Faibussowitsch PetscCall(PCFactorGetMatSolverType(pc,&stype)); 14400c67f3bSHong Zhang if (!stype) { 145ea799195SBarry Smith MatSolverType solverpackage; 1469566063dSJacob Faibussowitsch PetscCall(MatFactorGetSolverType(((PC_Factor*)dir)->fact,&solverpackage)); 1479566063dSJacob Faibussowitsch PetscCall(PCFactorSetMatSolverType(pc,solverpackage)); 14800c67f3bSHong Zhang } 1499b54502bSHong Zhang PetscFunctionReturn(0); 1509b54502bSHong Zhang } 1519b54502bSHong Zhang 152574deadeSBarry Smith static PetscErrorCode PCReset_LU(PC pc) 1539b54502bSHong Zhang { 1549b54502bSHong Zhang PC_LU *dir = (PC_LU*)pc->data; 1559b54502bSHong Zhang 1569b54502bSHong Zhang PetscFunctionBegin; 1579566063dSJacob Faibussowitsch if (!dir->hdr.inplace && ((PC_Factor*)dir)->fact) PetscCall(MatDestroy(&((PC_Factor*)dir)->fact)); 1589566063dSJacob Faibussowitsch if (dir->row && dir->col && dir->row != dir->col) PetscCall(ISDestroy(&dir->row)); 1599566063dSJacob Faibussowitsch PetscCall(ISDestroy(&dir->col)); 160574deadeSBarry Smith PetscFunctionReturn(0); 161574deadeSBarry Smith } 162574deadeSBarry Smith 163574deadeSBarry Smith static PetscErrorCode PCDestroy_LU(PC pc) 164574deadeSBarry Smith { 165574deadeSBarry Smith PC_LU *dir = (PC_LU*)pc->data; 166574deadeSBarry Smith 167574deadeSBarry Smith PetscFunctionBegin; 1689566063dSJacob Faibussowitsch PetscCall(PCReset_LU(pc)); 1699566063dSJacob Faibussowitsch PetscCall(PetscFree(((PC_Factor*)dir)->ordering)); 1709566063dSJacob Faibussowitsch PetscCall(PetscFree(((PC_Factor*)dir)->solvertype)); 1712e956fe4SStefano Zampini PetscCall(PCFactorClearComposedFunctions(pc)); 1729566063dSJacob Faibussowitsch PetscCall(PetscFree(pc->data)); 1739b54502bSHong Zhang PetscFunctionReturn(0); 1749b54502bSHong Zhang } 1759b54502bSHong Zhang 1769b54502bSHong Zhang static PetscErrorCode PCApply_LU(PC pc,Vec x,Vec y) 1779b54502bSHong Zhang { 1789b54502bSHong Zhang PC_LU *dir = (PC_LU*)pc->data; 1799b54502bSHong Zhang 1809b54502bSHong Zhang PetscFunctionBegin; 1813d1c1ea0SBarry Smith if (dir->hdr.inplace) { 1829566063dSJacob Faibussowitsch PetscCall(MatSolve(pc->pmat,x,y)); 1832fa5cd67SKarl Rupp } else { 1849566063dSJacob Faibussowitsch PetscCall(MatSolve(((PC_Factor*)dir)->fact,x,y)); 1852fa5cd67SKarl Rupp } 1869b54502bSHong Zhang PetscFunctionReturn(0); 1879b54502bSHong Zhang } 1889b54502bSHong Zhang 1897b6e2003SPierre Jolivet static PetscErrorCode PCMatApply_LU(PC pc,Mat X,Mat Y) 1907b6e2003SPierre Jolivet { 1917b6e2003SPierre Jolivet PC_LU *dir = (PC_LU*)pc->data; 1927b6e2003SPierre Jolivet 1937b6e2003SPierre Jolivet PetscFunctionBegin; 1947b6e2003SPierre Jolivet if (dir->hdr.inplace) { 1959566063dSJacob Faibussowitsch PetscCall(MatMatSolve(pc->pmat,X,Y)); 1967b6e2003SPierre Jolivet } else { 1979566063dSJacob Faibussowitsch PetscCall(MatMatSolve(((PC_Factor*)dir)->fact,X,Y)); 1987b6e2003SPierre Jolivet } 1997b6e2003SPierre Jolivet PetscFunctionReturn(0); 2007b6e2003SPierre Jolivet } 2017b6e2003SPierre Jolivet 2029b54502bSHong Zhang static PetscErrorCode PCApplyTranspose_LU(PC pc,Vec x,Vec y) 2039b54502bSHong Zhang { 2049b54502bSHong Zhang PC_LU *dir = (PC_LU*)pc->data; 2059b54502bSHong Zhang 2069b54502bSHong Zhang PetscFunctionBegin; 2073d1c1ea0SBarry Smith if (dir->hdr.inplace) { 2089566063dSJacob Faibussowitsch PetscCall(MatSolveTranspose(pc->pmat,x,y)); 2092fa5cd67SKarl Rupp } else { 2109566063dSJacob Faibussowitsch PetscCall(MatSolveTranspose(((PC_Factor*)dir)->fact,x,y)); 2112fa5cd67SKarl Rupp } 2129b54502bSHong Zhang PetscFunctionReturn(0); 2139b54502bSHong Zhang } 2149b54502bSHong Zhang 2159b54502bSHong Zhang /* -----------------------------------------------------------------------------------*/ 2169b54502bSHong Zhang 2179b54502bSHong Zhang /*MC 2189b54502bSHong Zhang PCLU - Uses a direct solver, based on LU factorization, as a preconditioner 2199b54502bSHong Zhang 2209b54502bSHong Zhang Options Database Keys: 2212401956bSBarry Smith + -pc_factor_reuse_ordering - Activate PCFactorSetReuseOrdering() 2223ca39a21SBarry Smith . -pc_factor_mat_solver_type - Actives PCFactorSetMatSolverType() to choose the direct solver, like superlu 2232401956bSBarry Smith . -pc_factor_reuse_fill - Activates PCFactorSetReuseFill() 22455ba2a51SBarry Smith . -pc_factor_fill <fill> - Sets fill amount 2252401956bSBarry Smith . -pc_factor_in_place - Activates in-place factorization 2262401956bSBarry Smith . -pc_factor_mat_ordering_type <nd,rcm,...> - Sets ordering routine 2272401956bSBarry Smith . -pc_factor_pivot_in_blocks <true,false> - allow pivoting within the small blocks during factorization (may increase 2289b54502bSHong Zhang stability of factorization. 229145b9266SHong Zhang . -pc_factor_shift_type <shifttype> - Sets shift type or PETSC_DECIDE for the default; use '-help' for a list of available types 230145b9266SHong Zhang . -pc_factor_shift_amount <shiftamount> - Sets shift amount or PETSC_DECIDE for the default 231*26cc229bSBarry Smith . -pc_factor_nonzeros_along_diagonal - permutes the rows and columns to try to put nonzero value along the diagonal. 232*26cc229bSBarry Smith - -mat_solvertype_optionname - options for a specific solver package, for example -mat_mumps_cntl_1 2339b54502bSHong Zhang 23495452b02SPatrick Sanan Notes: 23595452b02SPatrick Sanan Not all options work for all matrix formats 2369b54502bSHong Zhang Run with -help to see additional options for particular matrix formats or factorization 2379b54502bSHong Zhang algorithms 2389b54502bSHong Zhang 2399b54502bSHong Zhang Level: beginner 2409b54502bSHong Zhang 24195452b02SPatrick Sanan Notes: 24295452b02SPatrick Sanan Usually this will compute an "exact" solution in one iteration and does 2439b54502bSHong Zhang not need a Krylov method (i.e. you can use -ksp_type preonly, or 2449b54502bSHong Zhang KSPSetType(ksp,KSPPREONLY) for the Krylov method 2459b54502bSHong Zhang 246db781477SPatrick Sanan .seealso: `PCCreate()`, `PCSetType()`, `PCType`, `PC`, 247db781477SPatrick Sanan `PCILU`, `PCCHOLESKY`, `PCICC`, `PCFactorSetReuseOrdering()`, `PCFactorSetReuseFill()`, `PCFactorGetMatrix()`, 248db781477SPatrick Sanan `PCFactorSetFill()`, `PCFactorSetUseInPlace()`, `PCFactorSetMatOrderingType()`, `PCFactorSetColumnPivot()`, 249c2e3fba1SPatrick Sanan `PCFactorSetPivotInBlocks()`, `PCFactorSetShiftType()`, `PCFactorSetShiftAmount()` 250db781477SPatrick Sanan `PCFactorReorderForNonzeroDiagonal()` 2519b54502bSHong Zhang M*/ 2529b54502bSHong Zhang 2538cc058d9SJed Brown PETSC_EXTERN PetscErrorCode PCCreate_LU(PC pc) 2549b54502bSHong Zhang { 2559b54502bSHong Zhang PC_LU *dir; 2569b54502bSHong Zhang 2579b54502bSHong Zhang PetscFunctionBegin; 2589566063dSJacob Faibussowitsch PetscCall(PetscNewLog(pc,&dir)); 2593d1c1ea0SBarry Smith pc->data = (void*)dir; 2609566063dSJacob Faibussowitsch PetscCall(PCFactorInitialize(pc,MAT_FACTOR_LU)); 2619b54502bSHong Zhang dir->nonzerosalongdiagonal = PETSC_FALSE; 2629b54502bSHong Zhang 263075768bcSBarry Smith ((PC_Factor*)dir)->info.fill = 5.0; 264075768bcSBarry Smith ((PC_Factor*)dir)->info.dtcol = 1.e-6; /* default to pivoting; this is only thing PETSc LU supports */ 265f4db908eSBarry Smith ((PC_Factor*)dir)->info.shifttype = (PetscReal)MAT_SHIFT_NONE; 2660a545947SLisandro Dalcin dir->col = NULL; 2670a545947SLisandro Dalcin dir->row = NULL; 2685c9eb25fSBarry Smith 269574deadeSBarry Smith pc->ops->reset = PCReset_LU; 2709b54502bSHong Zhang pc->ops->destroy = PCDestroy_LU; 2719b54502bSHong Zhang pc->ops->apply = PCApply_LU; 2727b6e2003SPierre Jolivet pc->ops->matapply = PCMatApply_LU; 2739b54502bSHong Zhang pc->ops->applytranspose = PCApplyTranspose_LU; 2749b54502bSHong Zhang pc->ops->setup = PCSetUp_LU; 2759b54502bSHong Zhang pc->ops->setfromoptions = PCSetFromOptions_LU; 27692e08861SBarry Smith pc->ops->view = PCView_Factor; 2770a545947SLisandro Dalcin pc->ops->applyrichardson = NULL; 2789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)pc,"PCFactorReorderForNonzeroDiagonal_C",PCFactorReorderForNonzeroDiagonal_LU)); 2799b54502bSHong Zhang PetscFunctionReturn(0); 2809b54502bSHong Zhang } 281