1dba47a55SKris Buschelman 29b54502bSHong Zhang /* 39b54502bSHong Zhang Defines a direct factorization preconditioner for any Mat implementation 49b54502bSHong Zhang Note: this need not be consided a preconditioner since it supplies 59b54502bSHong Zhang a direct solver. 69b54502bSHong Zhang */ 7ee45ca4aSHong Zhang 8c6db04a5SJed Brown #include <../src/ksp/pc/impls/factor/lu/lu.h> /*I "petscpc.h" I*/ 99b54502bSHong Zhang 107087cfbeSBarry Smith PetscErrorCode PCFactorReorderForNonzeroDiagonal_LU(PC pc,PetscReal z) 119b54502bSHong Zhang { 129b54502bSHong Zhang PC_LU *lu = (PC_LU*)pc->data; 139b54502bSHong Zhang 149b54502bSHong Zhang PetscFunctionBegin; 159b54502bSHong Zhang lu->nonzerosalongdiagonal = PETSC_TRUE; 162fa5cd67SKarl Rupp if (z == PETSC_DECIDE) lu->nonzerosalongdiagonaltol = 1.e-10; 172fa5cd67SKarl Rupp else lu->nonzerosalongdiagonaltol = z; 189b54502bSHong Zhang PetscFunctionReturn(0); 199b54502bSHong Zhang } 209b54502bSHong Zhang 214416b707SBarry Smith static PetscErrorCode PCSetFromOptions_LU(PetscOptionItems *PetscOptionsObject,PC pc) 229b54502bSHong Zhang { 239b54502bSHong Zhang PC_LU *lu = (PC_LU*)pc->data; 24ace3abfcSBarry Smith PetscBool flg = PETSC_FALSE; 259b54502bSHong Zhang PetscReal tol; 269b54502bSHong Zhang 279b54502bSHong Zhang PetscFunctionBegin; 28d0609cedSBarry Smith PetscOptionsHeadBegin(PetscOptionsObject,"LU options"); 299566063dSJacob Faibussowitsch PetscCall(PCSetFromOptions_Factor(PetscOptionsObject,pc)); 305c9eb25fSBarry Smith 319566063dSJacob Faibussowitsch PetscCall(PetscOptionsName("-pc_factor_nonzeros_along_diagonal","Reorder to remove zeros from diagonal","PCFactorReorderForNonzeroDiagonal",&flg)); 329b54502bSHong Zhang if (flg) { 339b54502bSHong Zhang tol = PETSC_DECIDE; 349566063dSJacob Faibussowitsch PetscCall(PetscOptionsReal("-pc_factor_nonzeros_along_diagonal","Reorder to remove zeros from diagonal","PCFactorReorderForNonzeroDiagonal",lu->nonzerosalongdiagonaltol,&tol,NULL)); 359566063dSJacob Faibussowitsch PetscCall(PCFactorReorderForNonzeroDiagonal(pc,tol)); 369b54502bSHong Zhang } 37d0609cedSBarry Smith PetscOptionsHeadEnd(); 389b54502bSHong Zhang PetscFunctionReturn(0); 399b54502bSHong Zhang } 409b54502bSHong Zhang 419b54502bSHong Zhang static PetscErrorCode PCSetUp_LU(PC pc) 429b54502bSHong Zhang { 439b54502bSHong Zhang PC_LU *dir = (PC_LU*)pc->data; 44ea799195SBarry Smith MatSolverType stype; 4500e125f8SBarry Smith MatFactorError err; 46f023e1d5SPierre Jolivet const char *prefix; 473d1c1ea0SBarry Smith 489b54502bSHong Zhang PetscFunctionBegin; 49f023e1d5SPierre Jolivet PetscCall(PCGetOptionsPrefix(pc,&prefix)); 50f023e1d5SPierre Jolivet PetscCall(MatSetOptionsPrefix(pc->pmat,prefix)); 51c6e4fdc6SHong Zhang pc->failedreason = PC_NOERROR; 523d1c1ea0SBarry Smith if (dir->hdr.reusefill && pc->setupcalled) ((PC_Factor*)dir)->info.fill = dir->hdr.actualfill; 539b54502bSHong Zhang 549566063dSJacob Faibussowitsch PetscCall(MatSetErrorIfFailure(pc->pmat,pc->erroriffailure)); 553d1c1ea0SBarry Smith if (dir->hdr.inplace) { 569d76b4d0SMatthew G. Knepley MatFactorType ftype; 579d76b4d0SMatthew G. Knepley 589566063dSJacob Faibussowitsch PetscCall(MatGetFactorType(pc->pmat, &ftype)); 599d76b4d0SMatthew G. Knepley if (ftype == MAT_FACTOR_NONE) { 609566063dSJacob Faibussowitsch if (dir->row && dir->col && dir->row != dir->col) PetscCall(ISDestroy(&dir->row)); 619566063dSJacob Faibussowitsch PetscCall(ISDestroy(&dir->col)); 622c7c0729SBarry Smith /* This should only get the ordering if needed, but since MatGetFactor() is not called we can't know if it is needed */ 639566063dSJacob Faibussowitsch PetscCall(PCFactorSetDefaultOrdering_Factor(pc)); 649566063dSJacob Faibussowitsch PetscCall(MatGetOrdering(pc->pmat,((PC_Factor*)dir)->ordering,&dir->row,&dir->col)); 6503c60df9SBarry Smith if (dir->row) { 669566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)dir->row)); 679566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)dir->col)); 6803c60df9SBarry Smith } 699566063dSJacob Faibussowitsch PetscCall(MatLUFactor(pc->pmat,dir->row,dir->col,&((PC_Factor*)dir)->info)); 709566063dSJacob Faibussowitsch PetscCall(MatFactorGetError(pc->pmat,&err)); 7100e125f8SBarry Smith if (err) { /* Factor() fails */ 7200e125f8SBarry Smith pc->failedreason = (PCFailedReason)err; 736baea169SHong Zhang PetscFunctionReturn(0); 746baea169SHong Zhang } 759d76b4d0SMatthew G. Knepley } 76075768bcSBarry Smith ((PC_Factor*)dir)->fact = pc->pmat; 779b54502bSHong Zhang } else { 789b54502bSHong Zhang MatInfo info; 7900e125f8SBarry Smith 809b54502bSHong Zhang if (!pc->setupcalled) { 81f73b0415SBarry Smith PetscBool canuseordering; 822c7c0729SBarry Smith if (!((PC_Factor*)dir)->fact) { 839566063dSJacob Faibussowitsch PetscCall(MatGetFactor(pc->pmat,((PC_Factor*)dir)->solvertype,MAT_FACTOR_LU,&((PC_Factor*)dir)->fact)); 849566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)((PC_Factor*)dir)->fact)); 852c7c0729SBarry Smith } 869566063dSJacob Faibussowitsch PetscCall(MatFactorGetCanUseOrdering(((PC_Factor*)dir)->fact,&canuseordering)); 87f73b0415SBarry Smith if (canuseordering) { 889566063dSJacob Faibussowitsch PetscCall(PCFactorSetDefaultOrdering_Factor(pc)); 899566063dSJacob Faibussowitsch PetscCall(MatGetOrdering(pc->pmat,((PC_Factor*)dir)->ordering,&dir->row,&dir->col)); 909b54502bSHong Zhang if (dir->nonzerosalongdiagonal) { 919566063dSJacob Faibussowitsch PetscCall(MatReorderForNonzeroDiagonal(pc->pmat,dir->nonzerosalongdiagonaltol,dir->row,dir->col)); 929b54502bSHong Zhang } 939566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)dir->row)); 949566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)dir->col)); 9503c60df9SBarry Smith } 969566063dSJacob Faibussowitsch PetscCall(MatLUFactorSymbolic(((PC_Factor*)dir)->fact,pc->pmat,dir->row,dir->col,&((PC_Factor*)dir)->info)); 979566063dSJacob Faibussowitsch PetscCall(MatGetInfo(((PC_Factor*)dir)->fact,MAT_LOCAL,&info)); 983d1c1ea0SBarry Smith dir->hdr.actualfill = info.fill_ratio_needed; 999b54502bSHong Zhang } else if (pc->flag != SAME_NONZERO_PATTERN) { 100f73b0415SBarry Smith PetscBool canuseordering; 1013d1c1ea0SBarry Smith if (!dir->hdr.reuseordering) { 1029566063dSJacob Faibussowitsch PetscCall(MatDestroy(&((PC_Factor*)dir)->fact)); 1039566063dSJacob Faibussowitsch PetscCall(MatGetFactor(pc->pmat,((PC_Factor*)dir)->solvertype,MAT_FACTOR_LU,&((PC_Factor*)dir)->fact)); 1049566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)((PC_Factor*)dir)->fact)); 1059566063dSJacob Faibussowitsch PetscCall(MatFactorGetCanUseOrdering(((PC_Factor*)dir)->fact,&canuseordering)); 106f73b0415SBarry Smith if (canuseordering) { 1079566063dSJacob Faibussowitsch if (dir->row && dir->col && dir->row != dir->col) PetscCall(ISDestroy(&dir->row)); 1089566063dSJacob Faibussowitsch PetscCall(ISDestroy(&dir->col)); 1099566063dSJacob Faibussowitsch PetscCall(PCFactorSetDefaultOrdering_Factor(pc)); 1109566063dSJacob Faibussowitsch PetscCall(MatGetOrdering(pc->pmat,((PC_Factor*)dir)->ordering,&dir->row,&dir->col)); 1119b54502bSHong Zhang if (dir->nonzerosalongdiagonal) { 1129566063dSJacob Faibussowitsch PetscCall(MatReorderForNonzeroDiagonal(pc->pmat,dir->nonzerosalongdiagonaltol,dir->row,dir->col)); 1139b54502bSHong Zhang } 1149566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)dir->row)); 1159566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)dir->col)); 11603c60df9SBarry Smith } 1179b54502bSHong Zhang } 1189566063dSJacob Faibussowitsch PetscCall(MatLUFactorSymbolic(((PC_Factor*)dir)->fact,pc->pmat,dir->row,dir->col,&((PC_Factor*)dir)->info)); 1199566063dSJacob Faibussowitsch PetscCall(MatGetInfo(((PC_Factor*)dir)->fact,MAT_LOCAL,&info)); 1203d1c1ea0SBarry Smith dir->hdr.actualfill = info.fill_ratio_needed; 12104545d6dSBarry Smith } else { 1229566063dSJacob Faibussowitsch PetscCall(MatFactorGetError(((PC_Factor*)dir)->fact,&err)); 123160a8794SBarry Smith if (err == MAT_FACTOR_NUMERIC_ZEROPIVOT) { 1249566063dSJacob Faibussowitsch PetscCall(MatFactorClearError(((PC_Factor*)dir)->fact)); 125b8b68cfdSBarry Smith pc->failedreason = PC_NOERROR; 12604545d6dSBarry Smith } 1279b54502bSHong Zhang } 1289566063dSJacob Faibussowitsch PetscCall(MatFactorGetError(((PC_Factor*)dir)->fact,&err)); 12900e125f8SBarry Smith if (err) { /* FactorSymbolic() fails */ 13000e125f8SBarry Smith pc->failedreason = (PCFailedReason)err; 1318c1cd74cSHong Zhang PetscFunctionReturn(0); 1328c1cd74cSHong Zhang } 1338c1cd74cSHong Zhang 1349566063dSJacob Faibussowitsch PetscCall(MatLUFactorNumeric(((PC_Factor*)dir)->fact,pc->pmat,&((PC_Factor*)dir)->info)); 1359566063dSJacob Faibussowitsch PetscCall(MatFactorGetError(((PC_Factor*)dir)->fact,&err)); 13600e125f8SBarry Smith if (err) { /* FactorNumeric() fails */ 13700e125f8SBarry Smith pc->failedreason = (PCFailedReason)err; 1388c1cd74cSHong Zhang } 139680c5173SHong Zhang 1409b54502bSHong Zhang } 14100c67f3bSHong Zhang 1429566063dSJacob Faibussowitsch PetscCall(PCFactorGetMatSolverType(pc,&stype)); 14300c67f3bSHong Zhang if (!stype) { 144ea799195SBarry Smith MatSolverType solverpackage; 1459566063dSJacob Faibussowitsch PetscCall(MatFactorGetSolverType(((PC_Factor*)dir)->fact,&solverpackage)); 1469566063dSJacob Faibussowitsch PetscCall(PCFactorSetMatSolverType(pc,solverpackage)); 14700c67f3bSHong Zhang } 1489b54502bSHong Zhang PetscFunctionReturn(0); 1499b54502bSHong Zhang } 1509b54502bSHong Zhang 151574deadeSBarry Smith static PetscErrorCode PCReset_LU(PC pc) 1529b54502bSHong Zhang { 1539b54502bSHong Zhang PC_LU *dir = (PC_LU*)pc->data; 1549b54502bSHong Zhang 1559b54502bSHong Zhang PetscFunctionBegin; 1569566063dSJacob Faibussowitsch if (!dir->hdr.inplace && ((PC_Factor*)dir)->fact) PetscCall(MatDestroy(&((PC_Factor*)dir)->fact)); 1579566063dSJacob Faibussowitsch if (dir->row && dir->col && dir->row != dir->col) PetscCall(ISDestroy(&dir->row)); 1589566063dSJacob Faibussowitsch PetscCall(ISDestroy(&dir->col)); 159574deadeSBarry Smith PetscFunctionReturn(0); 160574deadeSBarry Smith } 161574deadeSBarry Smith 162574deadeSBarry Smith static PetscErrorCode PCDestroy_LU(PC pc) 163574deadeSBarry Smith { 164574deadeSBarry Smith PC_LU *dir = (PC_LU*)pc->data; 165574deadeSBarry Smith 166574deadeSBarry Smith PetscFunctionBegin; 1679566063dSJacob Faibussowitsch PetscCall(PCReset_LU(pc)); 1689566063dSJacob Faibussowitsch PetscCall(PetscFree(((PC_Factor*)dir)->ordering)); 1699566063dSJacob Faibussowitsch PetscCall(PetscFree(((PC_Factor*)dir)->solvertype)); 1709566063dSJacob Faibussowitsch PetscCall(PetscFree(pc->data)); 1719b54502bSHong Zhang PetscFunctionReturn(0); 1729b54502bSHong Zhang } 1739b54502bSHong Zhang 1749b54502bSHong Zhang static PetscErrorCode PCApply_LU(PC pc,Vec x,Vec y) 1759b54502bSHong Zhang { 1769b54502bSHong Zhang PC_LU *dir = (PC_LU*)pc->data; 1779b54502bSHong Zhang 1789b54502bSHong Zhang PetscFunctionBegin; 1793d1c1ea0SBarry Smith if (dir->hdr.inplace) { 1809566063dSJacob Faibussowitsch PetscCall(MatSolve(pc->pmat,x,y)); 1812fa5cd67SKarl Rupp } else { 1829566063dSJacob Faibussowitsch PetscCall(MatSolve(((PC_Factor*)dir)->fact,x,y)); 1832fa5cd67SKarl Rupp } 1849b54502bSHong Zhang PetscFunctionReturn(0); 1859b54502bSHong Zhang } 1869b54502bSHong Zhang 1877b6e2003SPierre Jolivet static PetscErrorCode PCMatApply_LU(PC pc,Mat X,Mat Y) 1887b6e2003SPierre Jolivet { 1897b6e2003SPierre Jolivet PC_LU *dir = (PC_LU*)pc->data; 1907b6e2003SPierre Jolivet 1917b6e2003SPierre Jolivet PetscFunctionBegin; 1927b6e2003SPierre Jolivet if (dir->hdr.inplace) { 1939566063dSJacob Faibussowitsch PetscCall(MatMatSolve(pc->pmat,X,Y)); 1947b6e2003SPierre Jolivet } else { 1959566063dSJacob Faibussowitsch PetscCall(MatMatSolve(((PC_Factor*)dir)->fact,X,Y)); 1967b6e2003SPierre Jolivet } 1977b6e2003SPierre Jolivet PetscFunctionReturn(0); 1987b6e2003SPierre Jolivet } 1997b6e2003SPierre Jolivet 2009b54502bSHong Zhang static PetscErrorCode PCApplyTranspose_LU(PC pc,Vec x,Vec y) 2019b54502bSHong Zhang { 2029b54502bSHong Zhang PC_LU *dir = (PC_LU*)pc->data; 2039b54502bSHong Zhang 2049b54502bSHong Zhang PetscFunctionBegin; 2053d1c1ea0SBarry Smith if (dir->hdr.inplace) { 2069566063dSJacob Faibussowitsch PetscCall(MatSolveTranspose(pc->pmat,x,y)); 2072fa5cd67SKarl Rupp } else { 2089566063dSJacob Faibussowitsch PetscCall(MatSolveTranspose(((PC_Factor*)dir)->fact,x,y)); 2092fa5cd67SKarl Rupp } 2109b54502bSHong Zhang PetscFunctionReturn(0); 2119b54502bSHong Zhang } 2129b54502bSHong Zhang 2139b54502bSHong Zhang /* -----------------------------------------------------------------------------------*/ 2149b54502bSHong Zhang 2159b54502bSHong Zhang /*MC 2169b54502bSHong Zhang PCLU - Uses a direct solver, based on LU factorization, as a preconditioner 2179b54502bSHong Zhang 2189b54502bSHong Zhang Options Database Keys: 2192401956bSBarry Smith + -pc_factor_reuse_ordering - Activate PCFactorSetReuseOrdering() 2203ca39a21SBarry Smith . -pc_factor_mat_solver_type - Actives PCFactorSetMatSolverType() to choose the direct solver, like superlu 2212401956bSBarry Smith . -pc_factor_reuse_fill - Activates PCFactorSetReuseFill() 22255ba2a51SBarry Smith . -pc_factor_fill <fill> - Sets fill amount 2232401956bSBarry Smith . -pc_factor_in_place - Activates in-place factorization 2242401956bSBarry Smith . -pc_factor_mat_ordering_type <nd,rcm,...> - Sets ordering routine 2252401956bSBarry Smith . -pc_factor_pivot_in_blocks <true,false> - allow pivoting within the small blocks during factorization (may increase 2269b54502bSHong Zhang stability of factorization. 227145b9266SHong Zhang . -pc_factor_shift_type <shifttype> - Sets shift type or PETSC_DECIDE for the default; use '-help' for a list of available types 228145b9266SHong Zhang . -pc_factor_shift_amount <shiftamount> - Sets shift amount or PETSC_DECIDE for the default 229e22d95b2SBarry Smith - -pc_factor_nonzeros_along_diagonal - permutes the rows and columns to try to put nonzero value along the 230e22d95b2SBarry Smith diagonal. 2319b54502bSHong Zhang 23295452b02SPatrick Sanan Notes: 23395452b02SPatrick Sanan Not all options work for all matrix formats 2349b54502bSHong Zhang Run with -help to see additional options for particular matrix formats or factorization 2359b54502bSHong Zhang algorithms 2369b54502bSHong Zhang 2379b54502bSHong Zhang Level: beginner 2389b54502bSHong Zhang 23995452b02SPatrick Sanan Notes: 24095452b02SPatrick Sanan Usually this will compute an "exact" solution in one iteration and does 2419b54502bSHong Zhang not need a Krylov method (i.e. you can use -ksp_type preonly, or 2429b54502bSHong Zhang KSPSetType(ksp,KSPPREONLY) for the Krylov method 2439b54502bSHong Zhang 244db781477SPatrick Sanan .seealso: `PCCreate()`, `PCSetType()`, `PCType`, `PC`, 245db781477SPatrick Sanan `PCILU`, `PCCHOLESKY`, `PCICC`, `PCFactorSetReuseOrdering()`, `PCFactorSetReuseFill()`, `PCFactorGetMatrix()`, 246db781477SPatrick Sanan `PCFactorSetFill()`, `PCFactorSetUseInPlace()`, `PCFactorSetMatOrderingType()`, `PCFactorSetColumnPivot()`, 247*c2e3fba1SPatrick Sanan `PCFactorSetPivotInBlocks()`, `PCFactorSetShiftType()`, `PCFactorSetShiftAmount()` 248db781477SPatrick Sanan `PCFactorReorderForNonzeroDiagonal()` 2499b54502bSHong Zhang M*/ 2509b54502bSHong Zhang 2518cc058d9SJed Brown PETSC_EXTERN PetscErrorCode PCCreate_LU(PC pc) 2529b54502bSHong Zhang { 2539b54502bSHong Zhang PC_LU *dir; 2549b54502bSHong Zhang 2559b54502bSHong Zhang PetscFunctionBegin; 2569566063dSJacob Faibussowitsch PetscCall(PetscNewLog(pc,&dir)); 2573d1c1ea0SBarry Smith pc->data = (void*)dir; 2589566063dSJacob Faibussowitsch PetscCall(PCFactorInitialize(pc,MAT_FACTOR_LU)); 2599b54502bSHong Zhang dir->nonzerosalongdiagonal = PETSC_FALSE; 2609b54502bSHong Zhang 261075768bcSBarry Smith ((PC_Factor*)dir)->info.fill = 5.0; 262075768bcSBarry Smith ((PC_Factor*)dir)->info.dtcol = 1.e-6; /* default to pivoting; this is only thing PETSc LU supports */ 263f4db908eSBarry Smith ((PC_Factor*)dir)->info.shifttype = (PetscReal)MAT_SHIFT_NONE; 2640a545947SLisandro Dalcin dir->col = NULL; 2650a545947SLisandro Dalcin dir->row = NULL; 2665c9eb25fSBarry Smith 267574deadeSBarry Smith pc->ops->reset = PCReset_LU; 2689b54502bSHong Zhang pc->ops->destroy = PCDestroy_LU; 2699b54502bSHong Zhang pc->ops->apply = PCApply_LU; 2707b6e2003SPierre Jolivet pc->ops->matapply = PCMatApply_LU; 2719b54502bSHong Zhang pc->ops->applytranspose = PCApplyTranspose_LU; 2729b54502bSHong Zhang pc->ops->setup = PCSetUp_LU; 2739b54502bSHong Zhang pc->ops->setfromoptions = PCSetFromOptions_LU; 27492e08861SBarry Smith pc->ops->view = PCView_Factor; 2750a545947SLisandro Dalcin pc->ops->applyrichardson = NULL; 2769566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)pc,"PCFactorReorderForNonzeroDiagonal_C",PCFactorReorderForNonzeroDiagonal_LU)); 2779b54502bSHong Zhang PetscFunctionReturn(0); 2789b54502bSHong Zhang } 279