18e6d0c30SPeter Brune #include <../src/ksp/pc/impls/gamg/gamg.h> /*I "petscpc.h" I*/ 28e6d0c30SPeter Brune #include <petsc-private/kspimpl.h> 38e6d0c30SPeter Brune 48eab0cc1SPeter Brune PetscFunctionList PCGAMGClassicalProlongatorList = NULL; 58eab0cc1SPeter Brune PetscBool PCGAMGClassicalPackageInitialized = PETSC_FALSE; 68eab0cc1SPeter Brune 78e6d0c30SPeter Brune typedef struct { 8586a8384SPeter Brune PetscReal interp_threshold; /* interpolation threshold */ 98eab0cc1SPeter Brune char prolongtype[256]; 108e6d0c30SPeter Brune } PC_GAMG_Classical; 118e6d0c30SPeter Brune 128eab0cc1SPeter Brune #undef __FUNCT__ 138eab0cc1SPeter Brune #define __FUNCT__ "PCGAMGClassicalSetType" 14*7779008dSPeter Brune /*@C 158eab0cc1SPeter Brune PCGAMGClassicalSetType - Sets the type of classical interpolation to use 168eab0cc1SPeter Brune 178eab0cc1SPeter Brune Collective on PC 188eab0cc1SPeter Brune 198eab0cc1SPeter Brune Input Parameters: 208eab0cc1SPeter Brune . pc - the preconditioner context 218eab0cc1SPeter Brune 228eab0cc1SPeter Brune Options Database Key: 238eab0cc1SPeter Brune . -pc_gamg_classical_type 248eab0cc1SPeter Brune 258eab0cc1SPeter Brune Level: intermediate 268eab0cc1SPeter Brune 278eab0cc1SPeter Brune .seealso: () 288eab0cc1SPeter Brune @*/ 298eab0cc1SPeter Brune PetscErrorCode PCGAMGClassicalSetType(PC pc, PCGAMGClassicalType type) 308eab0cc1SPeter Brune { 318eab0cc1SPeter Brune PetscErrorCode ierr; 328eab0cc1SPeter Brune 338eab0cc1SPeter Brune PetscFunctionBegin; 348eab0cc1SPeter Brune PetscValidHeaderSpecific(pc,PC_CLASSID,1); 358eab0cc1SPeter Brune ierr = PetscTryMethod(pc,"PCGAMGClassicalSetType_C",(PC,PCGAMGType),(pc,type));CHKERRQ(ierr); 368eab0cc1SPeter Brune PetscFunctionReturn(0); 378eab0cc1SPeter Brune } 388eab0cc1SPeter Brune 398eab0cc1SPeter Brune #undef __FUNCT__ 408eab0cc1SPeter Brune #define __FUNCT__ "PCGAMGClassicalSetType_GAMG" 418eab0cc1SPeter Brune static PetscErrorCode PCGAMGClassicalSetType_GAMG(PC pc, PCGAMGClassicalType type) 428eab0cc1SPeter Brune { 438eab0cc1SPeter Brune PetscErrorCode ierr; 448eab0cc1SPeter Brune PC_MG *mg = (PC_MG*)pc->data; 458eab0cc1SPeter Brune PC_GAMG *pc_gamg = (PC_GAMG*)mg->innerctx; 468eab0cc1SPeter Brune PC_GAMG_Classical *cls = (PC_GAMG_Classical*)pc_gamg->subctx; 478eab0cc1SPeter Brune 488eab0cc1SPeter Brune PetscFunctionBegin; 498eab0cc1SPeter Brune ierr = PetscStrcpy(cls->prolongtype,type);CHKERRQ(ierr); 508eab0cc1SPeter Brune PetscFunctionReturn(0); 518eab0cc1SPeter Brune } 528e6d0c30SPeter Brune 538e6d0c30SPeter Brune #undef __FUNCT__ 54bfde193fSPeter Brune #define __FUNCT__ "PCGAMGClassicalCreateGhostVector_Private" 55bfde193fSPeter Brune PetscErrorCode PCGAMGClassicalCreateGhostVector_Private(Mat G,Vec *gvec,PetscInt **global) 568e6d0c30SPeter Brune { 578e6d0c30SPeter Brune Mat_MPIAIJ *aij = (Mat_MPIAIJ*)G->data; 588e6d0c30SPeter Brune PetscErrorCode ierr; 598e6d0c30SPeter Brune PetscBool isMPIAIJ; 608e6d0c30SPeter Brune 618e6d0c30SPeter Brune PetscFunctionBegin; 628e6d0c30SPeter Brune ierr = PetscObjectTypeCompare((PetscObject)G, MATMPIAIJ, &isMPIAIJ); CHKERRQ(ierr); 638e6d0c30SPeter Brune if (isMPIAIJ) { 648e6d0c30SPeter Brune if (gvec)ierr = VecDuplicate(aij->lvec,gvec);CHKERRQ(ierr); 658e6d0c30SPeter Brune if (global)*global = aij->garray; 668e6d0c30SPeter Brune } else { 678e6d0c30SPeter Brune /* no off-processor nodes */ 688e6d0c30SPeter Brune if (gvec)*gvec = NULL; 698e6d0c30SPeter Brune if (global)*global = NULL; 708e6d0c30SPeter Brune } 718e6d0c30SPeter Brune PetscFunctionReturn(0); 728e6d0c30SPeter Brune } 738e6d0c30SPeter Brune 748e6d0c30SPeter Brune #undef __FUNCT__ 75bfde193fSPeter Brune #define __FUNCT__ "PCGAMGClassicalGraphSplitting_Private" 768e6d0c30SPeter Brune /* 778e6d0c30SPeter Brune Split the relevant graph into diagonal and off-diagonal parts in local numbering; for now this 788e6d0c30SPeter Brune a roundabout private interface to the mats' internal diag and offdiag mats. 798e6d0c30SPeter Brune */ 80bfde193fSPeter Brune PetscErrorCode PCGAMGClassicalGraphSplitting_Private(Mat G,Mat *Gd, Mat *Go) 818e6d0c30SPeter Brune { 828e6d0c30SPeter Brune Mat_MPIAIJ *aij = (Mat_MPIAIJ*)G->data; 838e6d0c30SPeter Brune PetscErrorCode ierr; 848e6d0c30SPeter Brune PetscBool isMPIAIJ; 858e6d0c30SPeter Brune PetscFunctionBegin; 868e6d0c30SPeter Brune ierr = PetscObjectTypeCompare((PetscObject)G, MATMPIAIJ, &isMPIAIJ ); CHKERRQ(ierr); 878e6d0c30SPeter Brune if (isMPIAIJ) { 888e6d0c30SPeter Brune *Gd = aij->A; 898e6d0c30SPeter Brune *Go = aij->B; 908e6d0c30SPeter Brune } else { 918e6d0c30SPeter Brune *Gd = G; 928e6d0c30SPeter Brune *Go = NULL; 938e6d0c30SPeter Brune } 948e6d0c30SPeter Brune PetscFunctionReturn(0); 958e6d0c30SPeter Brune } 968e6d0c30SPeter Brune 978e6d0c30SPeter Brune #undef __FUNCT__ 988e6d0c30SPeter Brune #define __FUNCT__ "PCGAMGGraph_Classical" 9965b3d5b6SPeter Brune PetscErrorCode PCGAMGGraph_Classical(PC pc,const Mat A,Mat *G) 1008e6d0c30SPeter Brune { 101550383edSPeter Brune PetscInt s,f,n,idx,lidx,gidx; 102e5a0faa4SPeter Brune PetscInt r,c,ncols; 1038e6d0c30SPeter Brune const PetscInt *rcol; 1048e6d0c30SPeter Brune const PetscScalar *rval; 105e5a0faa4SPeter Brune PetscInt *gcol; 1068e6d0c30SPeter Brune PetscScalar *gval; 107e5a0faa4SPeter Brune PetscReal rmax; 108550383edSPeter Brune PetscInt cmax = 0; 1098e6d0c30SPeter Brune PC_MG *mg; 1108e6d0c30SPeter Brune PC_GAMG *gamg; 1118e6d0c30SPeter Brune PetscErrorCode ierr; 1128e6d0c30SPeter Brune PetscInt *gsparse,*lsparse; 113e5a0faa4SPeter Brune PetscScalar *Amax; 1148e6d0c30SPeter Brune MatType mtype; 1158e6d0c30SPeter Brune 1168e6d0c30SPeter Brune PetscFunctionBegin; 1178e6d0c30SPeter Brune mg = (PC_MG *)pc->data; 1188e6d0c30SPeter Brune gamg = (PC_GAMG *)mg->innerctx; 1198e6d0c30SPeter Brune 1208e6d0c30SPeter Brune ierr = MatGetOwnershipRange(A,&s,&f);CHKERRQ(ierr); 121550383edSPeter Brune n=f-s; 122550383edSPeter Brune ierr = PetscMalloc(sizeof(PetscInt)*n,&lsparse);CHKERRQ(ierr); 123550383edSPeter Brune ierr = PetscMalloc(sizeof(PetscInt)*n,&gsparse);CHKERRQ(ierr); 124550383edSPeter Brune ierr = PetscMalloc(sizeof(PetscScalar)*n,&Amax);CHKERRQ(ierr); 1258e6d0c30SPeter Brune 126550383edSPeter Brune for (r = 0;r < n;r++) { 1278e6d0c30SPeter Brune lsparse[r] = 0; 128550383edSPeter Brune gsparse[r] = 0; 1298e6d0c30SPeter Brune } 1308e6d0c30SPeter Brune 131550383edSPeter Brune for (r = s;r < f;r++) { 132e5a0faa4SPeter Brune /* determine the maximum off-diagonal in each row */ 133e5a0faa4SPeter Brune rmax = 0.; 134550383edSPeter Brune ierr = MatGetRow(A,r,&ncols,&rcol,&rval);CHKERRQ(ierr); 135e5a0faa4SPeter Brune for (c = 0; c < ncols; c++) { 1361ce39c63SPeter Brune if (PetscRealPart(-rval[c]) > rmax && rcol[c] != r) { 1371ce39c63SPeter Brune rmax = PetscRealPart(-rval[c]); 138e5a0faa4SPeter Brune } 139e5a0faa4SPeter Brune } 140550383edSPeter Brune Amax[r-s] = rmax; 141550383edSPeter Brune if (ncols > cmax) cmax = ncols; 142550383edSPeter Brune lidx = 0; 143550383edSPeter Brune gidx = 0; 144e5a0faa4SPeter Brune /* create the local and global sparsity patterns */ 1458e6d0c30SPeter Brune for (c = 0; c < ncols; c++) { 1461ce39c63SPeter Brune if (PetscRealPart(-rval[c]) > gamg->threshold*PetscRealPart(Amax[r-s])) { 147550383edSPeter Brune if (rcol[c] < f && rcol[c] >= s) { 148550383edSPeter Brune lidx++; 149550383edSPeter Brune } else { 150550383edSPeter Brune gidx++; 1518e6d0c30SPeter Brune } 1528e6d0c30SPeter Brune } 1538e6d0c30SPeter Brune } 154550383edSPeter Brune ierr = MatRestoreRow(A,r,&ncols,&rcol,&rval);CHKERRQ(ierr); 155550383edSPeter Brune lsparse[r-s] = lidx; 156550383edSPeter Brune gsparse[r-s] = gidx; 1578e6d0c30SPeter Brune } 158e5a0faa4SPeter Brune ierr = PetscMalloc(sizeof(PetscScalar)*cmax,&gval);CHKERRQ(ierr); 159e5a0faa4SPeter Brune ierr = PetscMalloc(sizeof(PetscInt)*cmax,&gcol);CHKERRQ(ierr); 160e5a0faa4SPeter Brune 1618e6d0c30SPeter Brune ierr = MatCreate(PetscObjectComm((PetscObject)A),G); CHKERRQ(ierr); 1628e6d0c30SPeter Brune ierr = MatGetType(A,&mtype);CHKERRQ(ierr); 1638e6d0c30SPeter Brune ierr = MatSetType(*G,mtype);CHKERRQ(ierr); 164550383edSPeter Brune ierr = MatSetSizes(*G,n,n,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr); 1658e6d0c30SPeter Brune ierr = MatMPIAIJSetPreallocation(*G,0,lsparse,0,gsparse);CHKERRQ(ierr); 1668e6d0c30SPeter Brune ierr = MatSeqAIJSetPreallocation(*G,0,lsparse);CHKERRQ(ierr); 1678e6d0c30SPeter Brune for (r = s;r < f;r++) { 1688e6d0c30SPeter Brune ierr = MatGetRow(A,r,&ncols,&rcol,&rval);CHKERRQ(ierr); 1698e6d0c30SPeter Brune idx = 0; 1708e6d0c30SPeter Brune for (c = 0; c < ncols; c++) { 1718e6d0c30SPeter Brune /* classical strength of connection */ 1721ce39c63SPeter Brune if (PetscRealPart(-rval[c]) > gamg->threshold*PetscRealPart(Amax[r-s])) { 1738e6d0c30SPeter Brune gcol[idx] = rcol[c]; 1748e6d0c30SPeter Brune gval[idx] = rval[c]; 1758e6d0c30SPeter Brune idx++; 1768e6d0c30SPeter Brune } 1778e6d0c30SPeter Brune } 1788e6d0c30SPeter Brune ierr = MatSetValues(*G,1,&r,idx,gcol,gval,INSERT_VALUES);CHKERRQ(ierr); 1798e6d0c30SPeter Brune ierr = MatRestoreRow(A,r,&ncols,&rcol,&rval);CHKERRQ(ierr); 1808e6d0c30SPeter Brune } 1818e6d0c30SPeter Brune ierr = MatAssemblyBegin(*G, MAT_FINAL_ASSEMBLY); CHKERRQ(ierr); 1828e6d0c30SPeter Brune ierr = MatAssemblyEnd(*G, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1838e6d0c30SPeter Brune 1848e6d0c30SPeter Brune ierr = PetscFree(gval);CHKERRQ(ierr); 1858e6d0c30SPeter Brune ierr = PetscFree(gcol);CHKERRQ(ierr); 1868e6d0c30SPeter Brune ierr = PetscFree(lsparse);CHKERRQ(ierr); 1878e6d0c30SPeter Brune ierr = PetscFree(gsparse);CHKERRQ(ierr); 188e5a0faa4SPeter Brune ierr = PetscFree(Amax);CHKERRQ(ierr); 1898e6d0c30SPeter Brune PetscFunctionReturn(0); 1908e6d0c30SPeter Brune } 1918e6d0c30SPeter Brune 1928e6d0c30SPeter Brune 1938e6d0c30SPeter Brune #undef __FUNCT__ 1948e6d0c30SPeter Brune #define __FUNCT__ "PCGAMGCoarsen_Classical" 1958e6d0c30SPeter Brune PetscErrorCode PCGAMGCoarsen_Classical(PC pc,Mat *G,PetscCoarsenData **agg_lists) 1968e6d0c30SPeter Brune { 1978e6d0c30SPeter Brune PetscErrorCode ierr; 1988e6d0c30SPeter Brune MatCoarsen crs; 1998e6d0c30SPeter Brune MPI_Comm fcomm = ((PetscObject)pc)->comm; 2008e6d0c30SPeter Brune 2018e6d0c30SPeter Brune PetscFunctionBegin; 2028e6d0c30SPeter Brune 2038e6d0c30SPeter Brune 2048e6d0c30SPeter Brune /* construct the graph if necessary */ 2058e6d0c30SPeter Brune if (!G) { 2068e6d0c30SPeter Brune SETERRQ(fcomm,PETSC_ERR_ARG_WRONGSTATE,"Must set Graph in PC in PCGAMG before coarsening"); 2078e6d0c30SPeter Brune } 2088e6d0c30SPeter Brune 2098e6d0c30SPeter Brune ierr = MatCoarsenCreate(fcomm,&crs);CHKERRQ(ierr); 2108e6d0c30SPeter Brune ierr = MatCoarsenSetFromOptions(crs);CHKERRQ(ierr); 2118e6d0c30SPeter Brune ierr = MatCoarsenSetAdjacency(crs,*G);CHKERRQ(ierr); 2128e6d0c30SPeter Brune ierr = MatCoarsenSetStrictAggs(crs,PETSC_TRUE);CHKERRQ(ierr); 2138e6d0c30SPeter Brune ierr = MatCoarsenApply(crs);CHKERRQ(ierr); 2148e6d0c30SPeter Brune ierr = MatCoarsenGetData(crs,agg_lists);CHKERRQ(ierr); 2158e6d0c30SPeter Brune ierr = MatCoarsenDestroy(&crs);CHKERRQ(ierr); 2168e6d0c30SPeter Brune 2178e6d0c30SPeter Brune PetscFunctionReturn(0); 2188e6d0c30SPeter Brune } 2198e6d0c30SPeter Brune 2208e6d0c30SPeter Brune #undef __FUNCT__ 221bfde193fSPeter Brune #define __FUNCT__ "PCGAMGClassicalGhost_Private" 2228e6d0c30SPeter Brune /* 2238e6d0c30SPeter Brune Find all ghost nodes that are coarse and output the fine/coarse splitting for those as well 2248e6d0c30SPeter Brune 2258e6d0c30SPeter Brune Input: 2268e6d0c30SPeter Brune G - graph; 2278e6d0c30SPeter Brune gvec - Global Vector 2288e6d0c30SPeter Brune avec - Local part of the scattered vec 2298e6d0c30SPeter Brune bvec - Global part of the scattered vec 2308e6d0c30SPeter Brune 2318e6d0c30SPeter Brune Output: 2328e6d0c30SPeter Brune findx - indirection t 2338e6d0c30SPeter Brune 2348e6d0c30SPeter Brune */ 235bfde193fSPeter Brune PetscErrorCode PCGAMGClassicalGhost_Private(Mat G,Vec v,Vec gv) 2368e6d0c30SPeter Brune { 2378e6d0c30SPeter Brune PetscErrorCode ierr; 2388e6d0c30SPeter Brune Mat_MPIAIJ *aij = (Mat_MPIAIJ*)G->data; 2398e6d0c30SPeter Brune PetscBool isMPIAIJ; 2408e6d0c30SPeter Brune 2418e6d0c30SPeter Brune PetscFunctionBegin; 2428e6d0c30SPeter Brune ierr = PetscObjectTypeCompare((PetscObject)G, MATMPIAIJ, &isMPIAIJ ); CHKERRQ(ierr); 2438e6d0c30SPeter Brune if (isMPIAIJ) { 2448e6d0c30SPeter Brune ierr = VecScatterBegin(aij->Mvctx,v,gv,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 2458e6d0c30SPeter Brune ierr = VecScatterEnd(aij->Mvctx,v,gv,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 2468e6d0c30SPeter Brune } 2478e6d0c30SPeter Brune PetscFunctionReturn(0); 2488e6d0c30SPeter Brune } 2498e6d0c30SPeter Brune 2508e6d0c30SPeter Brune #undef __FUNCT__ 2518eab0cc1SPeter Brune #define __FUNCT__ "PCGAMGProlongator_Classical_Direct" 2528eab0cc1SPeter Brune PetscErrorCode PCGAMGProlongator_Classical_Direct(PC pc, const Mat A, const Mat G, PetscCoarsenData *agg_lists,Mat *P) 2538e6d0c30SPeter Brune { 2548e6d0c30SPeter Brune PetscErrorCode ierr; 2558e6d0c30SPeter Brune MPI_Comm comm; 2561ce39c63SPeter Brune PetscReal *Amax_pos,*Amax_neg; 2571ce39c63SPeter Brune Mat lA,gA; /* on and off diagonal matrices */ 2588e6d0c30SPeter Brune PetscInt fn; /* fine local blocked sizes */ 2598e6d0c30SPeter Brune PetscInt cn; /* coarse local blocked sizes */ 2608e6d0c30SPeter Brune PetscInt gn; /* size of the off-diagonal fine vector */ 2618e6d0c30SPeter Brune PetscInt fs,fe; /* fine (row) ownership range*/ 2628e6d0c30SPeter Brune PetscInt cs,ce; /* coarse (column) ownership range */ 2631ce39c63SPeter Brune PetscInt i,j; /* indices! */ 2648e6d0c30SPeter Brune PetscBool iscoarse; /* flag for determining if a node is coarse */ 2658e6d0c30SPeter Brune PetscInt *lcid,*gcid; /* on and off-processor coarse unknown IDs */ 2668e6d0c30SPeter Brune PetscInt *lsparse,*gsparse; /* on and off-processor sparsity patterns for prolongator */ 2678e6d0c30SPeter Brune PetscScalar pij; 2688e6d0c30SPeter Brune const PetscScalar *rval; 2698e6d0c30SPeter Brune const PetscInt *rcol; 2708e6d0c30SPeter Brune PetscScalar g_pos,g_neg,a_pos,a_neg,diag,invdiag,alpha,beta; 2718e6d0c30SPeter Brune Vec F; /* vec of coarse size */ 2728e6d0c30SPeter Brune Vec C; /* vec of fine size */ 2738e6d0c30SPeter Brune Vec gF; /* vec of off-diagonal fine size */ 2748e6d0c30SPeter Brune MatType mtype; 2758e6d0c30SPeter Brune PetscInt c_indx; 2768e6d0c30SPeter Brune PetscScalar c_scalar; 2778e6d0c30SPeter Brune PetscInt ncols,col; 2788e6d0c30SPeter Brune PetscInt row_f,row_c; 2791ce39c63SPeter Brune PetscInt cmax=0,idx; 2808e6d0c30SPeter Brune PetscScalar *pvals; 2818e6d0c30SPeter Brune PetscInt *pcols; 2821ce39c63SPeter Brune PC_MG *mg = (PC_MG*)pc->data; 2831ce39c63SPeter Brune PC_GAMG *gamg = (PC_GAMG*)mg->innerctx; 2848e6d0c30SPeter Brune 2858e6d0c30SPeter Brune PetscFunctionBegin; 2868e6d0c30SPeter Brune comm = ((PetscObject)pc)->comm; 2878e6d0c30SPeter Brune ierr = MatGetOwnershipRange(A,&fs,&fe); CHKERRQ(ierr); 2888e6d0c30SPeter Brune fn = (fe - fs); 2898e6d0c30SPeter Brune 2908e6d0c30SPeter Brune ierr = MatGetVecs(A,&F,NULL);CHKERRQ(ierr); 2918e6d0c30SPeter Brune 2928e6d0c30SPeter Brune /* get the number of local unknowns and the indices of the local unknowns */ 2938e6d0c30SPeter Brune 2948e6d0c30SPeter Brune ierr = PetscMalloc(sizeof(PetscInt)*fn,&lsparse);CHKERRQ(ierr); 2958e6d0c30SPeter Brune ierr = PetscMalloc(sizeof(PetscInt)*fn,&gsparse);CHKERRQ(ierr); 2968e6d0c30SPeter Brune ierr = PetscMalloc(sizeof(PetscInt)*fn,&lcid);CHKERRQ(ierr); 2971ce39c63SPeter Brune ierr = PetscMalloc(sizeof(PetscReal)*fn,&Amax_pos);CHKERRQ(ierr); 2981ce39c63SPeter Brune ierr = PetscMalloc(sizeof(PetscReal)*fn,&Amax_neg);CHKERRQ(ierr); 2998e6d0c30SPeter Brune 3008e6d0c30SPeter Brune /* count the number of coarse unknowns */ 3018e6d0c30SPeter Brune cn = 0; 3028e6d0c30SPeter Brune for (i=0;i<fn;i++) { 3038e6d0c30SPeter Brune /* filter out singletons */ 3048e6d0c30SPeter Brune ierr = PetscCDEmptyAt(agg_lists,i,&iscoarse); CHKERRQ(ierr); 3058e6d0c30SPeter Brune lcid[i] = -1; 3068e6d0c30SPeter Brune if (!iscoarse) { 3078e6d0c30SPeter Brune cn++; 3088e6d0c30SPeter Brune } 3098e6d0c30SPeter Brune } 3108e6d0c30SPeter Brune 3118e6d0c30SPeter Brune /* create the coarse vector */ 3128e6d0c30SPeter Brune ierr = VecCreateMPI(comm,cn,PETSC_DECIDE,&C);CHKERRQ(ierr); 3138e6d0c30SPeter Brune ierr = VecGetOwnershipRange(C,&cs,&ce);CHKERRQ(ierr); 3148e6d0c30SPeter Brune 3158e6d0c30SPeter Brune /* construct a global vector indicating the global indices of the coarse unknowns */ 3168e6d0c30SPeter Brune cn = 0; 3178e6d0c30SPeter Brune for (i=0;i<fn;i++) { 3188e6d0c30SPeter Brune ierr = PetscCDEmptyAt(agg_lists,i,&iscoarse); CHKERRQ(ierr); 3198e6d0c30SPeter Brune if (!iscoarse) { 3208e6d0c30SPeter Brune lcid[i] = cs+cn; 3218e6d0c30SPeter Brune cn++; 3228e6d0c30SPeter Brune } else { 3238e6d0c30SPeter Brune lcid[i] = -1; 3248e6d0c30SPeter Brune } 325167fb786SPeter Brune *((PetscInt *)&c_scalar) = lcid[i]; 3268e6d0c30SPeter Brune c_indx = fs+i; 3278e6d0c30SPeter Brune ierr = VecSetValues(F,1,&c_indx,&c_scalar,INSERT_VALUES);CHKERRQ(ierr); 3288e6d0c30SPeter Brune } 3298e6d0c30SPeter Brune 3308e6d0c30SPeter Brune ierr = VecAssemblyBegin(F);CHKERRQ(ierr); 3318e6d0c30SPeter Brune ierr = VecAssemblyEnd(F);CHKERRQ(ierr); 3328e6d0c30SPeter Brune 3331ce39c63SPeter Brune /* determine the biggest off-diagonal entries in each row */ 3341ce39c63SPeter Brune for (i=fs;i<fe;i++) { 3351ce39c63SPeter Brune Amax_pos[i-fs] = 0.; 3361ce39c63SPeter Brune Amax_neg[i-fs] = 0.; 3371ce39c63SPeter Brune ierr = MatGetRow(A,i,&ncols,&rcol,&rval);CHKERRQ(ierr); 3381ce39c63SPeter Brune for(j=0;j<ncols;j++){ 3391ce39c63SPeter Brune if ((PetscRealPart(-rval[j]) > Amax_neg[i-fs]) && i != rcol[j]) Amax_neg[i-fs] = PetscAbsScalar(rval[j]); 3401ce39c63SPeter Brune if ((PetscRealPart(rval[j]) > Amax_pos[i-fs]) && i != rcol[j]) Amax_pos[i-fs] = PetscAbsScalar(rval[j]); 3411ce39c63SPeter Brune } 3421ce39c63SPeter Brune if (ncols > cmax) cmax = ncols; 3431ce39c63SPeter Brune ierr = MatRestoreRow(A,i,&ncols,&rcol,&rval);CHKERRQ(ierr); 3441ce39c63SPeter Brune } 3451ce39c63SPeter Brune ierr = PetscMalloc(sizeof(PetscInt)*cmax,&pcols);CHKERRQ(ierr); 3461ce39c63SPeter Brune ierr = PetscMalloc(sizeof(PetscScalar)*cmax,&pvals);CHKERRQ(ierr); 3471ce39c63SPeter Brune 348167fb786SPeter Brune /* split the operator into two */ 349bfde193fSPeter Brune ierr = PCGAMGClassicalGraphSplitting_Private(A,&lA,&gA);CHKERRQ(ierr); 3508e6d0c30SPeter Brune 3518e6d0c30SPeter Brune /* scatter to the ghost vector */ 3521ce39c63SPeter Brune ierr = PCGAMGClassicalCreateGhostVector_Private(A,&gF,NULL);CHKERRQ(ierr); 3531ce39c63SPeter Brune ierr = PCGAMGClassicalGhost_Private(A,F,gF);CHKERRQ(ierr); 3548e6d0c30SPeter Brune 3551ce39c63SPeter Brune if (gA) { 3568e6d0c30SPeter Brune ierr = VecGetSize(gF,&gn);CHKERRQ(ierr); 3578e6d0c30SPeter Brune ierr = PetscMalloc(sizeof(PetscInt)*gn,&gcid);CHKERRQ(ierr); 3588e6d0c30SPeter Brune for (i=0;i<gn;i++) { 3598e6d0c30SPeter Brune ierr = VecGetValues(gF,1,&i,&c_scalar);CHKERRQ(ierr); 360167fb786SPeter Brune gcid[i] = *((PetscInt *)&c_scalar); 3618e6d0c30SPeter Brune } 3628e6d0c30SPeter Brune } 3638e6d0c30SPeter Brune 3648e6d0c30SPeter Brune ierr = VecDestroy(&F);CHKERRQ(ierr); 3658e6d0c30SPeter Brune ierr = VecDestroy(&gF);CHKERRQ(ierr); 3668e6d0c30SPeter Brune ierr = VecDestroy(&C);CHKERRQ(ierr); 3678e6d0c30SPeter Brune 3688e6d0c30SPeter Brune /* count the on and off processor sparsity patterns for the prolongator */ 3698e6d0c30SPeter Brune for (i=0;i<fn;i++) { 3708e6d0c30SPeter Brune /* on */ 3718e6d0c30SPeter Brune lsparse[i] = 0; 372e5a0faa4SPeter Brune gsparse[i] = 0; 3738e6d0c30SPeter Brune if (lcid[i] >= 0) { 3748e6d0c30SPeter Brune lsparse[i] = 1; 3758e6d0c30SPeter Brune gsparse[i] = 0; 3768e6d0c30SPeter Brune } else { 3771ce39c63SPeter Brune ierr = MatGetRow(lA,i,&ncols,&rcol,&rval);CHKERRQ(ierr); 3788e6d0c30SPeter Brune for (j = 0;j < ncols;j++) { 3791ce39c63SPeter Brune col = rcol[j]; 3801ce39c63SPeter Brune if (lcid[col] >= 0 && (PetscRealPart(rval[j]) > gamg->threshold*Amax_pos[i] || PetscRealPart(-rval[j]) > gamg->threshold*Amax_neg[i])) { 3818e6d0c30SPeter Brune lsparse[i] += 1; 3828e6d0c30SPeter Brune } 3838e6d0c30SPeter Brune } 3841ce39c63SPeter Brune ierr = MatRestoreRow(lA,i,&ncols,&rcol,&rval);CHKERRQ(ierr); 3858e6d0c30SPeter Brune /* off */ 3861ce39c63SPeter Brune if (gA) { 3871ce39c63SPeter Brune ierr = MatGetRow(gA,i,&ncols,&rcol,&rval);CHKERRQ(ierr); 3888e6d0c30SPeter Brune for (j = 0; j < ncols; j++) { 3891ce39c63SPeter Brune col = rcol[j]; 3901ce39c63SPeter Brune if (gcid[col] >= 0 && (PetscRealPart(rval[j]) > gamg->threshold*Amax_pos[i] || PetscRealPart(-rval[j]) > gamg->threshold*Amax_neg[i])) { 3918e6d0c30SPeter Brune gsparse[i] += 1; 3928e6d0c30SPeter Brune } 3938e6d0c30SPeter Brune } 3941ce39c63SPeter Brune ierr = MatRestoreRow(gA,i,&ncols,&rcol,&rval);CHKERRQ(ierr); 3958e6d0c30SPeter Brune } 3968e6d0c30SPeter Brune } 3971ce39c63SPeter Brune } 3988e6d0c30SPeter Brune 3998e6d0c30SPeter Brune /* preallocate and create the prolongator */ 4008e6d0c30SPeter Brune ierr = MatCreate(comm,P); CHKERRQ(ierr); 4018e6d0c30SPeter Brune ierr = MatGetType(G,&mtype);CHKERRQ(ierr); 4028e6d0c30SPeter Brune ierr = MatSetType(*P,mtype);CHKERRQ(ierr); 4038e6d0c30SPeter Brune 4048e6d0c30SPeter Brune ierr = MatSetSizes(*P,fn,cn,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr); 4058e6d0c30SPeter Brune ierr = MatMPIAIJSetPreallocation(*P,0,lsparse,0,gsparse);CHKERRQ(ierr); 4068e6d0c30SPeter Brune ierr = MatSeqAIJSetPreallocation(*P,0,lsparse);CHKERRQ(ierr); 4078e6d0c30SPeter Brune 4088e6d0c30SPeter Brune /* loop over local fine nodes -- get the diagonal, the sum of positive and negative strong and weak weights, and set up the row */ 4098e6d0c30SPeter Brune for (i = 0;i < fn;i++) { 4108e6d0c30SPeter Brune /* determine on or off */ 4118e6d0c30SPeter Brune row_f = i + fs; 4128e6d0c30SPeter Brune row_c = lcid[i]; 4138e6d0c30SPeter Brune if (row_c >= 0) { 4148e6d0c30SPeter Brune pij = 1.; 4158e6d0c30SPeter Brune ierr = MatSetValues(*P,1,&row_f,1,&row_c,&pij,INSERT_VALUES);CHKERRQ(ierr); 4168e6d0c30SPeter Brune } else { 4178e6d0c30SPeter Brune g_pos = 0.; 4188e6d0c30SPeter Brune g_neg = 0.; 4198e6d0c30SPeter Brune a_pos = 0.; 4208e6d0c30SPeter Brune a_neg = 0.; 4218e6d0c30SPeter Brune diag = 0.; 4228e6d0c30SPeter Brune 4231ce39c63SPeter Brune /* local connections */ 4248e6d0c30SPeter Brune ierr = MatGetRow(lA,i,&ncols,&rcol,&rval);CHKERRQ(ierr); 4251ce39c63SPeter Brune for (j = 0; j < ncols; j++) { 4261ce39c63SPeter Brune col = rcol[j]; 4271ce39c63SPeter Brune if (lcid[col] >= 0 && (PetscRealPart(rval[j]) > gamg->threshold*Amax_pos[i] || PetscRealPart(-rval[j]) > gamg->threshold*Amax_neg[i])) { 4281ce39c63SPeter Brune if (PetscRealPart(rval[j]) > 0.) { 4291ce39c63SPeter Brune g_pos += rval[j]; 4308e6d0c30SPeter Brune } else { 4311ce39c63SPeter Brune g_neg += rval[j]; 4328e6d0c30SPeter Brune } 4331ce39c63SPeter Brune } 4341ce39c63SPeter Brune if (col != i) { 4351ce39c63SPeter Brune if (PetscRealPart(rval[j]) > 0.) { 4361ce39c63SPeter Brune a_pos += rval[j]; 4371ce39c63SPeter Brune } else { 4381ce39c63SPeter Brune a_neg += rval[j]; 4391ce39c63SPeter Brune } 4401ce39c63SPeter Brune } else { 4411ce39c63SPeter Brune diag = rval[j]; 4421ce39c63SPeter Brune } 4438e6d0c30SPeter Brune } 4448e6d0c30SPeter Brune ierr = MatRestoreRow(lA,i,&ncols,&rcol,&rval);CHKERRQ(ierr); 4458e6d0c30SPeter Brune 4461ce39c63SPeter Brune /* ghosted connections */ 4478e6d0c30SPeter Brune if (gA) { 4488e6d0c30SPeter Brune ierr = MatGetRow(gA,i,&ncols,&rcol,&rval);CHKERRQ(ierr); 4491ce39c63SPeter Brune for (j = 0; j < ncols; j++) { 4501ce39c63SPeter Brune col = rcol[j]; 4511ce39c63SPeter Brune if (gcid[col] >= 0 && (PetscRealPart(rval[j]) > gamg->threshold*Amax_pos[i] || PetscRealPart(-rval[j]) > gamg->threshold*Amax_neg[i])) { 4521ce39c63SPeter Brune if (PetscRealPart(rval[j]) > 0.) { 4531ce39c63SPeter Brune g_pos += rval[j]; 4548e6d0c30SPeter Brune } else { 4551ce39c63SPeter Brune g_neg += rval[j]; 4568e6d0c30SPeter Brune } 4571ce39c63SPeter Brune } 4581ce39c63SPeter Brune if (PetscRealPart(rval[j]) > 0.) { 4591ce39c63SPeter Brune a_pos += rval[j]; 4601ce39c63SPeter Brune } else { 4611ce39c63SPeter Brune a_neg += rval[j]; 4621ce39c63SPeter Brune } 4638e6d0c30SPeter Brune } 4648e6d0c30SPeter Brune ierr = MatRestoreRow(gA,i,&ncols,&rcol,&rval);CHKERRQ(ierr); 4658e6d0c30SPeter Brune } 4668e6d0c30SPeter Brune 4678e6d0c30SPeter Brune if (g_neg == 0.) { 4688e6d0c30SPeter Brune alpha = 0.; 4698e6d0c30SPeter Brune } else { 4708e6d0c30SPeter Brune alpha = -a_neg/g_neg; 4718e6d0c30SPeter Brune } 4728e6d0c30SPeter Brune 4738e6d0c30SPeter Brune if (g_pos == 0.) { 4748e6d0c30SPeter Brune diag += a_pos; 4758e6d0c30SPeter Brune beta = 0.; 4768e6d0c30SPeter Brune } else { 4778e6d0c30SPeter Brune beta = -a_pos/g_pos; 4788e6d0c30SPeter Brune } 479e5a0faa4SPeter Brune if (diag == 0.) { 480e5a0faa4SPeter Brune invdiag = 0.; 481e5a0faa4SPeter Brune } else invdiag = 1. / diag; 4828e6d0c30SPeter Brune /* on */ 4831ce39c63SPeter Brune ierr = MatGetRow(lA,i,&ncols,&rcol,&rval);CHKERRQ(ierr); 4848e6d0c30SPeter Brune idx = 0; 4858e6d0c30SPeter Brune for (j = 0;j < ncols;j++) { 4861ce39c63SPeter Brune col = rcol[j]; 4871ce39c63SPeter Brune if (lcid[col] >= 0 && (PetscRealPart(rval[j]) > gamg->threshold*Amax_pos[i] || PetscRealPart(-rval[j]) > gamg->threshold*Amax_neg[i])) { 4888e6d0c30SPeter Brune row_f = i + fs; 4898e6d0c30SPeter Brune row_c = lcid[col]; 4908e6d0c30SPeter Brune /* set the values for on-processor ones */ 4911ce39c63SPeter Brune if (PetscRealPart(rval[j]) < 0.) { 4921ce39c63SPeter Brune pij = rval[j]*alpha*invdiag; 4938e6d0c30SPeter Brune } else { 4941ce39c63SPeter Brune pij = rval[j]*beta*invdiag; 4958e6d0c30SPeter Brune } 4968e6d0c30SPeter Brune if (PetscAbsScalar(pij) != 0.) { 4978e6d0c30SPeter Brune pvals[idx] = pij; 4988e6d0c30SPeter Brune pcols[idx] = row_c; 4998e6d0c30SPeter Brune idx++; 5008e6d0c30SPeter Brune } 5018e6d0c30SPeter Brune } 5028e6d0c30SPeter Brune } 5031ce39c63SPeter Brune ierr = MatRestoreRow(lA,i,&ncols,&rcol,&rval);CHKERRQ(ierr); 5048e6d0c30SPeter Brune /* off */ 5051ce39c63SPeter Brune if (gA) { 5061ce39c63SPeter Brune ierr = MatGetRow(gA,i,&ncols,&rcol,&rval);CHKERRQ(ierr); 5078e6d0c30SPeter Brune for (j = 0; j < ncols; j++) { 5081ce39c63SPeter Brune col = rcol[j]; 5091ce39c63SPeter Brune if (gcid[col] >= 0 && (PetscRealPart(rval[j]) > gamg->threshold*Amax_pos[i] || PetscRealPart(-rval[j]) > gamg->threshold*Amax_neg[i])) { 5108e6d0c30SPeter Brune row_f = i + fs; 5118e6d0c30SPeter Brune row_c = gcid[col]; 5128e6d0c30SPeter Brune /* set the values for on-processor ones */ 5131ce39c63SPeter Brune if (PetscRealPart(rval[j]) < 0.) { 5141ce39c63SPeter Brune pij = rval[j]*alpha*invdiag; 5158e6d0c30SPeter Brune } else { 5161ce39c63SPeter Brune pij = rval[j]*beta*invdiag; 5178e6d0c30SPeter Brune } 5188e6d0c30SPeter Brune if (PetscAbsScalar(pij) != 0.) { 5198e6d0c30SPeter Brune pvals[idx] = pij; 5208e6d0c30SPeter Brune pcols[idx] = row_c; 5218e6d0c30SPeter Brune idx++; 5228e6d0c30SPeter Brune } 5238e6d0c30SPeter Brune } 5248e6d0c30SPeter Brune } 5251ce39c63SPeter Brune ierr = MatRestoreRow(gA,i,&ncols,&rcol,&rval);CHKERRQ(ierr); 5263c9ab2c3SPeter Brune } 5278e6d0c30SPeter Brune ierr = MatSetValues(*P,1,&row_f,idx,pcols,pvals,INSERT_VALUES);CHKERRQ(ierr); 5288e6d0c30SPeter Brune } 5298e6d0c30SPeter Brune } 5303c9ab2c3SPeter Brune 5318e6d0c30SPeter Brune ierr = MatAssemblyBegin(*P, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 5328e6d0c30SPeter Brune ierr = MatAssemblyEnd(*P, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 5338e6d0c30SPeter Brune 5348e6d0c30SPeter Brune ierr = PetscFree(lsparse);CHKERRQ(ierr); 5358e6d0c30SPeter Brune ierr = PetscFree(gsparse);CHKERRQ(ierr); 5368e6d0c30SPeter Brune ierr = PetscFree(pcols);CHKERRQ(ierr); 5378e6d0c30SPeter Brune ierr = PetscFree(pvals);CHKERRQ(ierr); 5381ce39c63SPeter Brune ierr = PetscFree(Amax_pos);CHKERRQ(ierr); 5391ce39c63SPeter Brune ierr = PetscFree(Amax_neg);CHKERRQ(ierr); 5408e6d0c30SPeter Brune ierr = PetscFree(lcid);CHKERRQ(ierr); 5411ce39c63SPeter Brune if (gA) {ierr = PetscFree(gcid);CHKERRQ(ierr);} 5428e6d0c30SPeter Brune 5438e6d0c30SPeter Brune PetscFunctionReturn(0); 5448e6d0c30SPeter Brune } 5458e6d0c30SPeter Brune 5468e6d0c30SPeter Brune #undef __FUNCT__ 547586a8384SPeter Brune #define __FUNCT__ "PCGAMGTruncateProlongator_Private" 548586a8384SPeter Brune PetscErrorCode PCGAMGTruncateProlongator_Private(PC pc,Mat *P) 549586a8384SPeter Brune { 550586a8384SPeter Brune PetscInt j,i,ps,pf,pn,pcs,pcf,pcn,idx,cmax; 551586a8384SPeter Brune PetscErrorCode ierr; 552586a8384SPeter Brune const PetscScalar *pval; 553586a8384SPeter Brune const PetscInt *pcol; 554586a8384SPeter Brune PetscScalar *pnval; 555586a8384SPeter Brune PetscInt *pncol; 556586a8384SPeter Brune PetscInt ncols; 557586a8384SPeter Brune Mat Pnew; 558586a8384SPeter Brune PetscInt *lsparse,*gsparse; 559586a8384SPeter Brune PetscReal pmax_pos,pmax_neg,ptot_pos,ptot_neg,pthresh_pos,pthresh_neg; 560586a8384SPeter Brune PC_MG *mg = (PC_MG*)pc->data; 561586a8384SPeter Brune PC_GAMG *pc_gamg = (PC_GAMG*)mg->innerctx; 562586a8384SPeter Brune PC_GAMG_Classical *cls = (PC_GAMG_Classical*)pc_gamg->subctx; 563586a8384SPeter Brune 564586a8384SPeter Brune PetscFunctionBegin; 565586a8384SPeter Brune /* trim and rescale with reallocation */ 566586a8384SPeter Brune ierr = MatGetOwnershipRange(*P,&ps,&pf);CHKERRQ(ierr); 567586a8384SPeter Brune ierr = MatGetOwnershipRangeColumn(*P,&pcs,&pcf);CHKERRQ(ierr); 568586a8384SPeter Brune pn = pf-ps; 569586a8384SPeter Brune pcn = pcf-pcs; 570586a8384SPeter Brune ierr = PetscMalloc(sizeof(PetscInt)*pn,&lsparse);CHKERRQ(ierr); 571586a8384SPeter Brune ierr = PetscMalloc(sizeof(PetscInt)*pn,&gsparse);CHKERRQ(ierr); 572586a8384SPeter Brune /* allocate */ 573586a8384SPeter Brune cmax = 0; 574586a8384SPeter Brune for (i=ps;i<pf;i++) { 575586a8384SPeter Brune lsparse[i] = 0; 576586a8384SPeter Brune gsparse[i] = 0; 577586a8384SPeter Brune ierr = MatGetRow(*P,i,&ncols,&pcol,&pval);CHKERRQ(ierr); 578586a8384SPeter Brune if (ncols > cmax) { 579586a8384SPeter Brune cmax = ncols; 580586a8384SPeter Brune } 581586a8384SPeter Brune pmax_pos = 0.; 582586a8384SPeter Brune pmax_neg = 0.; 583586a8384SPeter Brune for (j=0;j<ncols;j++) { 584586a8384SPeter Brune if (PetscRealPart(pval[j]) > pmax_pos) { 585586a8384SPeter Brune pmax_pos = PetscRealPart(pval[j]); 586586a8384SPeter Brune } else if (PetscRealPart(pval[j]) < pmax_neg) { 587586a8384SPeter Brune pmax_neg = PetscRealPart(pval[j]); 588586a8384SPeter Brune } 589586a8384SPeter Brune } 590586a8384SPeter Brune for (j=0;j<ncols;j++) { 5918eab0cc1SPeter Brune if (PetscRealPart(pval[j]) >= pmax_pos*cls->interp_threshold || PetscRealPart(pval[j]) <= pmax_neg*cls->interp_threshold) { 592586a8384SPeter Brune if (pcol[j] < pcf || pcol[j] >= pcs) { 593586a8384SPeter Brune lsparse[i]++; 594586a8384SPeter Brune } else { 595586a8384SPeter Brune gsparse[i]++; 596586a8384SPeter Brune } 597586a8384SPeter Brune } 598586a8384SPeter Brune } 599586a8384SPeter Brune ierr = MatRestoreRow(*P,i,&ncols,&pcol,&pval);CHKERRQ(ierr); 600586a8384SPeter Brune } 601586a8384SPeter Brune 602586a8384SPeter Brune ierr = PetscMalloc(sizeof(PetscScalar)*cmax,&pnval);CHKERRQ(ierr); 603586a8384SPeter Brune ierr = PetscMalloc(sizeof(PetscInt)*cmax,&pncol);CHKERRQ(ierr); 604586a8384SPeter Brune 605586a8384SPeter Brune ierr = MatCreate(PetscObjectComm((PetscObject)*P),&Pnew);CHKERRQ(ierr); 606586a8384SPeter Brune ierr = MatSetType(Pnew, MATAIJ);CHKERRQ(ierr); 607586a8384SPeter Brune ierr = MatSetSizes(Pnew,pn,pcn,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr); 608586a8384SPeter Brune ierr = MatSeqAIJSetPreallocation(Pnew,0,lsparse);CHKERRQ(ierr); 609586a8384SPeter Brune ierr = MatMPIAIJSetPreallocation(Pnew,0,lsparse,0,gsparse);CHKERRQ(ierr); 610586a8384SPeter Brune 611586a8384SPeter Brune for (i=ps;i<pf;i++) { 612586a8384SPeter Brune ierr = MatGetRow(*P,i,&ncols,&pcol,&pval);CHKERRQ(ierr); 613586a8384SPeter Brune pmax_pos = 0.; 614586a8384SPeter Brune pmax_neg = 0.; 615586a8384SPeter Brune for (j=0;j<ncols;j++) { 616586a8384SPeter Brune if (PetscRealPart(pval[j]) > pmax_pos) { 617586a8384SPeter Brune pmax_pos = PetscRealPart(pval[j]); 618586a8384SPeter Brune } else if (PetscRealPart(pval[j]) < pmax_neg) { 619586a8384SPeter Brune pmax_neg = PetscRealPart(pval[j]); 620586a8384SPeter Brune } 621586a8384SPeter Brune } 622586a8384SPeter Brune pthresh_pos = 0.; 623586a8384SPeter Brune pthresh_neg = 0.; 624586a8384SPeter Brune ptot_pos = 0.; 625586a8384SPeter Brune ptot_neg = 0.; 626586a8384SPeter Brune for (j=0;j<ncols;j++) { 6278eab0cc1SPeter Brune if (PetscRealPart(pval[j]) >= cls->interp_threshold*pmax_pos) { 628586a8384SPeter Brune pthresh_pos += PetscRealPart(pval[j]); 6298eab0cc1SPeter Brune } else if (PetscRealPart(pval[j]) <= cls->interp_threshold*pmax_neg) { 630586a8384SPeter Brune pthresh_neg += PetscRealPart(pval[j]); 631586a8384SPeter Brune } 632586a8384SPeter Brune if (PetscRealPart(pval[j]) > 0.) { 633586a8384SPeter Brune ptot_pos += PetscRealPart(pval[j]); 634586a8384SPeter Brune } else { 635586a8384SPeter Brune ptot_neg += PetscRealPart(pval[j]); 636586a8384SPeter Brune } 637586a8384SPeter Brune } 638586a8384SPeter Brune if (PetscAbsScalar(pthresh_pos) > 0.) ptot_pos /= pthresh_pos; 639586a8384SPeter Brune if (PetscAbsScalar(pthresh_neg) > 0.) ptot_neg /= pthresh_neg; 640586a8384SPeter Brune idx=0; 641586a8384SPeter Brune for (j=0;j<ncols;j++) { 6428eab0cc1SPeter Brune if (PetscRealPart(pval[j]) >= pmax_pos*cls->interp_threshold) { 643586a8384SPeter Brune pnval[idx] = ptot_pos*pval[j]; 644586a8384SPeter Brune pncol[idx] = pcol[j]; 645586a8384SPeter Brune idx++; 6468eab0cc1SPeter Brune } else if (PetscRealPart(pval[j]) <= pmax_neg*cls->interp_threshold) { 647586a8384SPeter Brune pnval[idx] = ptot_neg*pval[j]; 648586a8384SPeter Brune pncol[idx] = pcol[j]; 649586a8384SPeter Brune idx++; 650586a8384SPeter Brune } 651586a8384SPeter Brune } 652586a8384SPeter Brune ierr = MatRestoreRow(*P,i,&ncols,&pcol,&pval);CHKERRQ(ierr); 653586a8384SPeter Brune ierr = MatSetValues(Pnew,1,&i,idx,pncol,pnval,INSERT_VALUES);CHKERRQ(ierr); 654586a8384SPeter Brune } 655586a8384SPeter Brune 656586a8384SPeter Brune ierr = MatAssemblyBegin(Pnew, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 657586a8384SPeter Brune ierr = MatAssemblyEnd(Pnew, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 658586a8384SPeter Brune ierr = MatDestroy(P);CHKERRQ(ierr); 659586a8384SPeter Brune 660586a8384SPeter Brune *P = Pnew; 661586a8384SPeter Brune ierr = PetscFree(lsparse);CHKERRQ(ierr); 662586a8384SPeter Brune ierr = PetscFree(gsparse);CHKERRQ(ierr); 663586a8384SPeter Brune ierr = PetscFree(pncol);CHKERRQ(ierr); 664586a8384SPeter Brune ierr = PetscFree(pnval);CHKERRQ(ierr); 665586a8384SPeter Brune PetscFunctionReturn(0); 666586a8384SPeter Brune } 667586a8384SPeter Brune 668586a8384SPeter Brune #undef __FUNCT__ 6698eab0cc1SPeter Brune #define __FUNCT__ "PCGAMGProlongator_Classical_Standard" 6708eab0cc1SPeter Brune PetscErrorCode PCGAMGProlongator_Classical_Standard(PC pc, const Mat A, const Mat G, PetscCoarsenData *agg_lists,Mat *P) 671f9a65ec8SPeter Brune { 672f9a65ec8SPeter Brune PetscErrorCode ierr; 673f9a65ec8SPeter Brune Mat *lA; 674f9a65ec8SPeter Brune Vec lv,v,cv; 675f9a65ec8SPeter Brune PetscScalar *lcid; 676f9a65ec8SPeter Brune IS lis; 677f9a65ec8SPeter Brune PetscInt fs,fe,cs,ce,nl,i,j,k,li,lni,ci; 678f9a65ec8SPeter Brune VecScatter lscat; 679f9a65ec8SPeter Brune PetscInt fn,cn,cid,c_indx; 680f9a65ec8SPeter Brune PetscBool iscoarse; 681f9a65ec8SPeter Brune PetscScalar c_scalar; 682f9a65ec8SPeter Brune const PetscScalar *vcol; 683f9a65ec8SPeter Brune const PetscInt *icol; 684f9a65ec8SPeter Brune const PetscInt *gidx; 685f9a65ec8SPeter Brune PetscInt ncols; 686f9a65ec8SPeter Brune PetscInt *lsparse,*gsparse; 687f9a65ec8SPeter Brune MatType mtype; 688f9a65ec8SPeter Brune PetscInt maxcols; 689ed4e82eaSPeter Brune PetscReal diag,jdiag,jwttotal; 690f9a65ec8SPeter Brune PetscScalar *pvcol,vi; 691f9a65ec8SPeter Brune PetscInt *picol; 692f9a65ec8SPeter Brune PetscInt pncols; 693ed4e82eaSPeter Brune PetscScalar *pcontrib,pentry,pjentry; 694586a8384SPeter Brune /* PC_MG *mg = (PC_MG*)pc->data; */ 695ed4e82eaSPeter Brune /* PC_GAMG *gamg = (PC_GAMG*)mg->innerctx; */ 696f9a65ec8SPeter Brune 697f9a65ec8SPeter Brune PetscFunctionBegin; 698f9a65ec8SPeter Brune 699f9a65ec8SPeter Brune ierr = MatGetOwnershipRange(A,&fs,&fe);CHKERRQ(ierr); 700f9a65ec8SPeter Brune fn = fe-fs; 701f9a65ec8SPeter Brune ierr = MatGetVecs(A,NULL,&v);CHKERRQ(ierr); 702f9a65ec8SPeter Brune ierr = ISCreateStride(PETSC_COMM_SELF,fe-fs,fs,1,&lis);CHKERRQ(ierr); 703f9a65ec8SPeter Brune /* increase the overlap by two to get neighbors of neighbors */ 704f9a65ec8SPeter Brune ierr = MatIncreaseOverlap(A,1,&lis,2);CHKERRQ(ierr); 705f9a65ec8SPeter Brune ierr = ISSort(lis);CHKERRQ(ierr); 706f9a65ec8SPeter Brune /* get the local part of A */ 707f9a65ec8SPeter Brune ierr = MatGetSubMatrices(A,1,&lis,&lis,MAT_INITIAL_MATRIX,&lA);CHKERRQ(ierr); 708f9a65ec8SPeter Brune /* build the scatter out of it */ 709f9a65ec8SPeter Brune ierr = ISGetLocalSize(lis,&nl);CHKERRQ(ierr); 710f9a65ec8SPeter Brune ierr = VecCreateSeq(PETSC_COMM_SELF,nl,&lv);CHKERRQ(ierr); 711f9a65ec8SPeter Brune ierr = VecScatterCreate(v,lis,lv,NULL,&lscat);CHKERRQ(ierr); 712f9a65ec8SPeter Brune 713f9a65ec8SPeter Brune ierr = PetscMalloc(sizeof(PetscInt)*fn,&lsparse);CHKERRQ(ierr); 714f9a65ec8SPeter Brune ierr = PetscMalloc(sizeof(PetscInt)*fn,&gsparse);CHKERRQ(ierr); 715ed4e82eaSPeter Brune ierr = PetscMalloc(sizeof(PetscReal)*nl,&pcontrib);CHKERRQ(ierr); 716f9a65ec8SPeter Brune 717f9a65ec8SPeter Brune /* create coarse vector */ 718f9a65ec8SPeter Brune cn = 0; 719f9a65ec8SPeter Brune for (i=0;i<fn;i++) { 720f9a65ec8SPeter Brune ierr = PetscCDEmptyAt(agg_lists,i,&iscoarse);CHKERRQ(ierr); 721f9a65ec8SPeter Brune if (!iscoarse) { 722f9a65ec8SPeter Brune cn++; 723f9a65ec8SPeter Brune } 724f9a65ec8SPeter Brune } 725f9a65ec8SPeter Brune ierr = VecCreateMPI(PetscObjectComm((PetscObject)A),cn,PETSC_DECIDE,&cv);CHKERRQ(ierr); 726f9a65ec8SPeter Brune ierr = VecGetOwnershipRange(cv,&cs,&ce);CHKERRQ(ierr); 727f9a65ec8SPeter Brune cn = 0; 728f9a65ec8SPeter Brune for (i=0;i<fn;i++) { 729f9a65ec8SPeter Brune ierr = PetscCDEmptyAt(agg_lists,i,&iscoarse); CHKERRQ(ierr); 730f9a65ec8SPeter Brune if (!iscoarse) { 731f9a65ec8SPeter Brune cid = cs+cn; 732f9a65ec8SPeter Brune cn++; 733f9a65ec8SPeter Brune } else { 734f9a65ec8SPeter Brune cid = -1; 735f9a65ec8SPeter Brune } 736*7779008dSPeter Brune c_scalar = *(PetscScalar*)&cid; 737f9a65ec8SPeter Brune c_indx = fs+i; 738f9a65ec8SPeter Brune ierr = VecSetValues(v,1,&c_indx,&c_scalar,INSERT_VALUES);CHKERRQ(ierr); 739f9a65ec8SPeter Brune } 740f9a65ec8SPeter Brune ierr = VecScatterBegin(lscat,v,lv,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 741f9a65ec8SPeter Brune ierr = VecScatterEnd(lscat,v,lv,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 742f9a65ec8SPeter Brune /* count to preallocate the prolongator */ 743f9a65ec8SPeter Brune ierr = ISGetIndices(lis,&gidx);CHKERRQ(ierr); 744f9a65ec8SPeter Brune ierr = VecGetArray(lv,&lcid);CHKERRQ(ierr); 745f9a65ec8SPeter Brune maxcols = 0; 746f9a65ec8SPeter Brune /* count the number of unique contributing coarse cells for each fine */ 747f9a65ec8SPeter Brune for (i=0;i<nl;i++) { 748ed4e82eaSPeter Brune pcontrib[i] = 0.; 749586a8384SPeter Brune ierr = MatGetRow(lA[0],i,&ncols,&icol,NULL);CHKERRQ(ierr); 750f9a65ec8SPeter Brune if (gidx[i] >= fs && gidx[i] < fe) { 751f9a65ec8SPeter Brune li = gidx[i] - fs; 752f9a65ec8SPeter Brune lsparse[li] = 0; 753f9a65ec8SPeter Brune gsparse[li] = 0; 754*7779008dSPeter Brune cid = *(PetscInt*)&(lcid[i]); 755f9a65ec8SPeter Brune if (cid >= 0) { 756f9a65ec8SPeter Brune lsparse[li] = 1; 757f9a65ec8SPeter Brune } else { 758f9a65ec8SPeter Brune for (j=0;j<ncols;j++) { 759*7779008dSPeter Brune if (*(PetscInt*)&(lcid[icol[j]]) >= 0) { 760f9a65ec8SPeter Brune pcontrib[icol[j]] = 1.; 761f9a65ec8SPeter Brune } else { 762f9a65ec8SPeter Brune ci = icol[j]; 763586a8384SPeter Brune ierr = MatRestoreRow(lA[0],i,&ncols,&icol,NULL);CHKERRQ(ierr); 764586a8384SPeter Brune ierr = MatGetRow(lA[0],ci,&ncols,&icol,NULL);CHKERRQ(ierr); 765f9a65ec8SPeter Brune for (k=0;k<ncols;k++) { 766*7779008dSPeter Brune if (*(PetscInt*)&(lcid[icol[k]]) >= 0) { 767f9a65ec8SPeter Brune pcontrib[icol[k]] = 1.; 768f9a65ec8SPeter Brune } 769f9a65ec8SPeter Brune } 770586a8384SPeter Brune ierr = MatRestoreRow(lA[0],ci,&ncols,&icol,NULL);CHKERRQ(ierr); 771586a8384SPeter Brune ierr = MatGetRow(lA[0],i,&ncols,&icol,NULL);CHKERRQ(ierr); 772f9a65ec8SPeter Brune } 773f9a65ec8SPeter Brune } 774f9a65ec8SPeter Brune for (j=0;j<ncols;j++) { 775*7779008dSPeter Brune if (*(PetscInt*)&(lcid[icol[j]]) >= 0 && pcontrib[icol[j]] != 0.) { 776*7779008dSPeter Brune lni = *(PetscInt*)&(lcid[icol[j]]); 777f9a65ec8SPeter Brune if (lni >= cs && lni < ce) { 778f9a65ec8SPeter Brune lsparse[li]++; 779f9a65ec8SPeter Brune } else { 780f9a65ec8SPeter Brune gsparse[li]++; 781f9a65ec8SPeter Brune } 782f9a65ec8SPeter Brune pcontrib[icol[j]] = 0.; 783f9a65ec8SPeter Brune } else { 784f9a65ec8SPeter Brune ci = icol[j]; 785586a8384SPeter Brune ierr = MatRestoreRow(lA[0],i,&ncols,&icol,NULL);CHKERRQ(ierr); 786586a8384SPeter Brune ierr = MatGetRow(lA[0],ci,&ncols,&icol,NULL);CHKERRQ(ierr); 787f9a65ec8SPeter Brune for (k=0;k<ncols;k++) { 788*7779008dSPeter Brune if (*(PetscInt*)&(lcid[icol[k]]) >= 0 && pcontrib[icol[k]] != 0.) { 789*7779008dSPeter Brune lni = *(PetscInt*)&(lcid[icol[k]]); 790f9a65ec8SPeter Brune if (lni >= cs && lni < ce) { 791f9a65ec8SPeter Brune lsparse[li]++; 792f9a65ec8SPeter Brune } else { 793f9a65ec8SPeter Brune gsparse[li]++; 794f9a65ec8SPeter Brune } 795f9a65ec8SPeter Brune pcontrib[icol[k]] = 0.; 796f9a65ec8SPeter Brune } 797f9a65ec8SPeter Brune } 798586a8384SPeter Brune ierr = MatRestoreRow(lA[0],ci,&ncols,&icol,NULL);CHKERRQ(ierr); 799586a8384SPeter Brune ierr = MatGetRow(lA[0],i,&ncols,&icol,NULL);CHKERRQ(ierr); 800f9a65ec8SPeter Brune } 801f9a65ec8SPeter Brune } 802ed4e82eaSPeter Brune } 803f9a65ec8SPeter Brune if (lsparse[li] + gsparse[li] > maxcols) maxcols = lsparse[li]+gsparse[li]; 804ed4e82eaSPeter Brune } 805f9a65ec8SPeter Brune ierr = MatRestoreRow(lA[0],i,&ncols,&icol,&vcol);CHKERRQ(ierr); 806f9a65ec8SPeter Brune } 807f9a65ec8SPeter Brune ierr = PetscMalloc(sizeof(PetscInt)*maxcols,&picol);CHKERRQ(ierr); 808f9a65ec8SPeter Brune ierr = PetscMalloc(sizeof(PetscScalar)*maxcols,&pvcol);CHKERRQ(ierr); 809f9a65ec8SPeter Brune ierr = MatCreate(PetscObjectComm((PetscObject)A),P);CHKERRQ(ierr); 810f9a65ec8SPeter Brune ierr = MatGetType(A,&mtype);CHKERRQ(ierr); 811f9a65ec8SPeter Brune ierr = MatSetType(*P,mtype);CHKERRQ(ierr); 812f9a65ec8SPeter Brune ierr = MatSetSizes(*P,fn,cn,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr); 813f9a65ec8SPeter Brune ierr = MatMPIAIJSetPreallocation(*P,0,lsparse,0,gsparse);CHKERRQ(ierr); 814f9a65ec8SPeter Brune ierr = MatSeqAIJSetPreallocation(*P,0,lsparse);CHKERRQ(ierr); 815f9a65ec8SPeter Brune for (i=0;i<nl;i++) { 816ed4e82eaSPeter Brune diag = 0.; 817f9a65ec8SPeter Brune if (gidx[i] >= fs && gidx[i] < fe) { 818f9a65ec8SPeter Brune li = gidx[i] - fs; 819f9a65ec8SPeter Brune pncols=0; 820*7779008dSPeter Brune cid = *(PetscInt*)&(lcid[i]); 821f9a65ec8SPeter Brune if (cid >= 0) { 822f9a65ec8SPeter Brune pncols = 1; 823f9a65ec8SPeter Brune picol[0] = cid; 824f9a65ec8SPeter Brune pvcol[0] = 1.; 825f9a65ec8SPeter Brune } else { 826f9a65ec8SPeter Brune ierr = MatGetRow(lA[0],i,&ncols,&icol,&vcol);CHKERRQ(ierr); 827f9a65ec8SPeter Brune for (j=0;j<ncols;j++) { 828ed4e82eaSPeter Brune pentry = vcol[j]; 829*7779008dSPeter Brune if (*(PetscInt*)&(lcid[icol[j]]) >= 0) { 830f9a65ec8SPeter Brune /* coarse neighbor */ 831ed4e82eaSPeter Brune pcontrib[icol[j]] += pentry; 832ed4e82eaSPeter Brune } else if (icol[j] != i) { 833f9a65ec8SPeter Brune /* the neighbor is a strongly connected fine node */ 834f9a65ec8SPeter Brune ci = icol[j]; 835f9a65ec8SPeter Brune vi = vcol[j]; 836f9a65ec8SPeter Brune ierr = MatRestoreRow(lA[0],i,&ncols,&icol,&vcol);CHKERRQ(ierr); 837f9a65ec8SPeter Brune ierr = MatGetRow(lA[0],ci,&ncols,&icol,&vcol);CHKERRQ(ierr); 838ed4e82eaSPeter Brune jwttotal=0.; 839f9a65ec8SPeter Brune jdiag = 0.; 840f9a65ec8SPeter Brune for (k=0;k<ncols;k++) { 841ed4e82eaSPeter Brune if (ci == icol[k]) { 842*7779008dSPeter Brune jdiag = PetscRealPart(vcol[k]); 843f9a65ec8SPeter Brune } 844f9a65ec8SPeter Brune } 845f9a65ec8SPeter Brune for (k=0;k<ncols;k++) { 846*7779008dSPeter Brune if (*(PetscInt*)&(lcid[icol[k]]) >= 0 && jdiag*PetscRealPart(vcol[k]) < 0.) { 847ed4e82eaSPeter Brune pjentry = vcol[k]; 848*7779008dSPeter Brune jwttotal += PetscRealPart(pjentry); 849f9a65ec8SPeter Brune } 850f9a65ec8SPeter Brune } 851ed4e82eaSPeter Brune if (jwttotal != 0.) { 852*7779008dSPeter Brune jwttotal = PetscRealPart(vi)/jwttotal; 853ed4e82eaSPeter Brune for (k=0;k<ncols;k++) { 854*7779008dSPeter Brune if (*(PetscInt*)&(lcid[icol[k]]) >= 0 && jdiag*PetscRealPart(vcol[k]) < 0.) { 855586a8384SPeter Brune pjentry = vcol[k]*jwttotal; 856ed4e82eaSPeter Brune pcontrib[icol[k]] += pjentry; 857ed4e82eaSPeter Brune } 858ed4e82eaSPeter Brune } 859ed4e82eaSPeter Brune } else { 860ed4e82eaSPeter Brune diag += PetscRealPart(vi); 861ed4e82eaSPeter Brune } 862f9a65ec8SPeter Brune ierr = MatRestoreRow(lA[0],ci,&ncols,&icol,&vcol);CHKERRQ(ierr); 863f9a65ec8SPeter Brune ierr = MatGetRow(lA[0],i,&ncols,&icol,&vcol);CHKERRQ(ierr); 864ed4e82eaSPeter Brune } else { 865ed4e82eaSPeter Brune diag += PetscRealPart(vcol[j]); 866f9a65ec8SPeter Brune } 867f9a65ec8SPeter Brune } 868586a8384SPeter Brune if (diag != 0.) { 869586a8384SPeter Brune diag = 1./diag; 870f9a65ec8SPeter Brune for (j=0;j<ncols;j++) { 871*7779008dSPeter Brune if (*(PetscInt*)&(lcid[icol[j]]) >= 0 && pcontrib[icol[j]] != 0.) { 872f9a65ec8SPeter Brune /* the neighbor is a coarse node */ 873ed4e82eaSPeter Brune if (PetscAbsScalar(pcontrib[icol[j]]) > 0.0) { 874*7779008dSPeter Brune lni = *(PetscInt*)&(lcid[icol[j]]); 875586a8384SPeter Brune pvcol[pncols] = -pcontrib[icol[j]]*diag; 876f9a65ec8SPeter Brune picol[pncols] = lni; 877f9a65ec8SPeter Brune pncols++; 878ed4e82eaSPeter Brune } 879ed4e82eaSPeter Brune pcontrib[icol[j]] = 0.; 880f9a65ec8SPeter Brune } else { 881f9a65ec8SPeter Brune /* the neighbor is a strongly connected fine node */ 882f9a65ec8SPeter Brune ci = icol[j]; 883f9a65ec8SPeter Brune ierr = MatRestoreRow(lA[0],i,&ncols,&icol,&vcol);CHKERRQ(ierr); 884f9a65ec8SPeter Brune ierr = MatGetRow(lA[0],ci,&ncols,&icol,&vcol);CHKERRQ(ierr); 885f9a65ec8SPeter Brune for (k=0;k<ncols;k++) { 886*7779008dSPeter Brune if (*(PetscInt*)&(lcid[icol[k]]) >= 0 && pcontrib[icol[k]] != 0.) { 887ed4e82eaSPeter Brune if (PetscAbsScalar(pcontrib[icol[k]]) > 0.0) { 888*7779008dSPeter Brune lni = *(PetscInt*)&(lcid[icol[k]]); 889586a8384SPeter Brune pvcol[pncols] = -pcontrib[icol[k]]*diag; 890f9a65ec8SPeter Brune picol[pncols] = lni; 891f9a65ec8SPeter Brune pncols++; 892f9a65ec8SPeter Brune } 893ed4e82eaSPeter Brune pcontrib[icol[k]] = 0.; 894ed4e82eaSPeter Brune } 895f9a65ec8SPeter Brune } 896f9a65ec8SPeter Brune ierr = MatRestoreRow(lA[0],ci,&ncols,&icol,&vcol);CHKERRQ(ierr); 897f9a65ec8SPeter Brune ierr = MatGetRow(lA[0],i,&ncols,&icol,&vcol);CHKERRQ(ierr); 898f9a65ec8SPeter Brune } 899ed4e82eaSPeter Brune pcontrib[icol[j]] = 0.; 900f9a65ec8SPeter Brune } 901f9a65ec8SPeter Brune ierr = MatRestoreRow(lA[0],i,&ncols,&icol,&vcol);CHKERRQ(ierr); 902f9a65ec8SPeter Brune } 903586a8384SPeter Brune } 904f9a65ec8SPeter Brune ci = gidx[i]; 905f9a65ec8SPeter Brune li = gidx[i] - fs; 906f9a65ec8SPeter Brune if (pncols > 0) { 907f9a65ec8SPeter Brune ierr = MatSetValues(*P,1,&ci,pncols,picol,pvcol,INSERT_VALUES);CHKERRQ(ierr); 908f9a65ec8SPeter Brune } 909f9a65ec8SPeter Brune } 910f9a65ec8SPeter Brune } 911f9a65ec8SPeter Brune ierr = ISRestoreIndices(lis,&gidx);CHKERRQ(ierr); 912f9a65ec8SPeter Brune ierr = VecRestoreArray(lv,&lcid);CHKERRQ(ierr); 913f9a65ec8SPeter Brune 914f9a65ec8SPeter Brune ierr = PetscFree(pcontrib);CHKERRQ(ierr); 915f9a65ec8SPeter Brune ierr = PetscFree(picol);CHKERRQ(ierr); 916f9a65ec8SPeter Brune ierr = PetscFree(pvcol);CHKERRQ(ierr); 917f9a65ec8SPeter Brune ierr = PetscFree(lsparse);CHKERRQ(ierr); 918f9a65ec8SPeter Brune ierr = PetscFree(gsparse);CHKERRQ(ierr); 919f9a65ec8SPeter Brune ierr = ISDestroy(&lis);CHKERRQ(ierr); 920f9a65ec8SPeter Brune ierr = MatDestroyMatrices(1,&lA);CHKERRQ(ierr); 921f9a65ec8SPeter Brune ierr = VecDestroy(&lv);CHKERRQ(ierr); 922f9a65ec8SPeter Brune ierr = VecDestroy(&cv);CHKERRQ(ierr); 923f9a65ec8SPeter Brune ierr = VecDestroy(&v);CHKERRQ(ierr); 924f9a65ec8SPeter Brune ierr = VecScatterDestroy(&lscat);CHKERRQ(ierr); 925f9a65ec8SPeter Brune 926f9a65ec8SPeter Brune ierr = MatAssemblyBegin(*P, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 927f9a65ec8SPeter Brune ierr = MatAssemblyEnd(*P, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 928f9a65ec8SPeter Brune 929f9a65ec8SPeter Brune /* 930f9a65ec8SPeter Brune Mat Pold; 931f9a65ec8SPeter Brune ierr = PCGAMGProlongator_Classical(pc,A,G,agg_lists,&Pold);CHKERRQ(ierr); 932f9a65ec8SPeter Brune ierr = MatView(Pold,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 933f9a65ec8SPeter Brune ierr = MatView(*P,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 934f9a65ec8SPeter Brune ierr = MatDestroy(&Pold);CHKERRQ(ierr); 935f9a65ec8SPeter Brune */ 9368eab0cc1SPeter Brune PetscFunctionReturn(0); 9378eab0cc1SPeter Brune } 938f9a65ec8SPeter Brune 9398eab0cc1SPeter Brune #undef __FUNCT__ 9408eab0cc1SPeter Brune #define __FUNCT__ "PCGAMGProlongator_Classical" 9418eab0cc1SPeter Brune PetscErrorCode PCGAMGProlongator_Classical(PC pc, const Mat A, const Mat G, PetscCoarsenData *agg_lists,Mat *P) 9428eab0cc1SPeter Brune { 9438eab0cc1SPeter Brune PetscErrorCode ierr; 9448eab0cc1SPeter Brune PetscErrorCode (*f)(PC,Mat,Mat,PetscCoarsenData*,Mat*); 9458eab0cc1SPeter Brune PC_MG *mg = (PC_MG*)pc->data; 9468eab0cc1SPeter Brune PC_GAMG *pc_gamg = (PC_GAMG*)mg->innerctx; 9478eab0cc1SPeter Brune PC_GAMG_Classical *cls = (PC_GAMG_Classical*)pc_gamg->subctx; 9488eab0cc1SPeter Brune 9498eab0cc1SPeter Brune PetscFunctionBegin; 9508eab0cc1SPeter Brune ierr = PetscFunctionListFind(PCGAMGClassicalProlongatorList,cls->prolongtype,&f);CHKERRQ(ierr); 9518eab0cc1SPeter Brune if (!f)SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_ARG_WRONGSTATE,"Cannot find PCGAMG Classical prolongator type"); 9528eab0cc1SPeter Brune ierr = (*f)(pc,A,G,agg_lists,P);CHKERRQ(ierr); 953586a8384SPeter Brune ierr = PCGAMGTruncateProlongator_Private(pc,P);CHKERRQ(ierr); 954f9a65ec8SPeter Brune PetscFunctionReturn(0); 955f9a65ec8SPeter Brune } 956f9a65ec8SPeter Brune 957f9a65ec8SPeter Brune #undef __FUNCT__ 9588e6d0c30SPeter Brune #define __FUNCT__ "PCGAMGDestroy_Classical" 9598e6d0c30SPeter Brune PetscErrorCode PCGAMGDestroy_Classical(PC pc) 9608e6d0c30SPeter Brune { 9618e6d0c30SPeter Brune PetscErrorCode ierr; 9628e6d0c30SPeter Brune PC_MG *mg = (PC_MG*)pc->data; 9638e6d0c30SPeter Brune PC_GAMG *pc_gamg = (PC_GAMG*)mg->innerctx; 9648e6d0c30SPeter Brune 9658e6d0c30SPeter Brune PetscFunctionBegin; 9668e6d0c30SPeter Brune ierr = PetscFree(pc_gamg->subctx);CHKERRQ(ierr); 9678eab0cc1SPeter Brune ierr = PetscObjectComposeFunction((PetscObject)pc,"PCGAMGClassicalSetType_C",NULL);CHKERRQ(ierr); 9688e6d0c30SPeter Brune PetscFunctionReturn(0); 9698e6d0c30SPeter Brune } 9708e6d0c30SPeter Brune 9718e6d0c30SPeter Brune #undef __FUNCT__ 9728e6d0c30SPeter Brune #define __FUNCT__ "PCGAMGSetFromOptions_Classical" 9738e6d0c30SPeter Brune PetscErrorCode PCGAMGSetFromOptions_Classical(PC pc) 9748e6d0c30SPeter Brune { 975586a8384SPeter Brune PC_MG *mg = (PC_MG*)pc->data; 976586a8384SPeter Brune PC_GAMG *pc_gamg = (PC_GAMG*)mg->innerctx; 977586a8384SPeter Brune PC_GAMG_Classical *cls = (PC_GAMG_Classical*)pc_gamg->subctx; 9788eab0cc1SPeter Brune char tname[256]; 979586a8384SPeter Brune PetscErrorCode ierr; 9808eab0cc1SPeter Brune PetscBool flg; 981586a8384SPeter Brune 9828e6d0c30SPeter Brune PetscFunctionBegin; 983586a8384SPeter Brune ierr = PetscOptionsHead("GAMG-Classical options");CHKERRQ(ierr); 9848eab0cc1SPeter Brune ierr = PetscOptionsList("-pc_gamg_classical_type","Type of Classical AMG prolongation", 9858eab0cc1SPeter Brune "PCGAMGClassicalSetType",PCGAMGClassicalProlongatorList,cls->prolongtype, tname, sizeof(tname), &flg);CHKERRQ(ierr); 9868eab0cc1SPeter Brune if (flg) { 9878eab0cc1SPeter Brune ierr = PCGAMGClassicalSetType(pc,tname);CHKERRQ(ierr); 9888eab0cc1SPeter Brune } 989586a8384SPeter Brune ierr = PetscOptionsReal("-pc_gamg_interp_threshold","Threshold for classical interpolator entries","",cls->interp_threshold,&cls->interp_threshold,NULL);CHKERRQ(ierr); 990586a8384SPeter Brune ierr = PetscOptionsTail();CHKERRQ(ierr); 9918e6d0c30SPeter Brune PetscFunctionReturn(0); 9928e6d0c30SPeter Brune } 9938e6d0c30SPeter Brune 9948e6d0c30SPeter Brune #undef __FUNCT__ 9958e6d0c30SPeter Brune #define __FUNCT__ "PCGAMGSetData_Classical" 9968e6d0c30SPeter Brune PetscErrorCode PCGAMGSetData_Classical(PC pc, Mat A) 9978e6d0c30SPeter Brune { 9988e6d0c30SPeter Brune PC_MG *mg = (PC_MG*)pc->data; 9998e6d0c30SPeter Brune PC_GAMG *pc_gamg = (PC_GAMG*)mg->innerctx; 10008e6d0c30SPeter Brune 10018e6d0c30SPeter Brune PetscFunctionBegin; 10028e6d0c30SPeter Brune /* no data for classical AMG */ 10038e6d0c30SPeter Brune pc_gamg->data = NULL; 1004d2050638SMark Adams pc_gamg->data_cell_cols = 0; 1005d2050638SMark Adams pc_gamg->data_cell_rows = 0; 10068e6d0c30SPeter Brune pc_gamg->data_sz = 0; 10078e6d0c30SPeter Brune PetscFunctionReturn(0); 10088e6d0c30SPeter Brune } 10098e6d0c30SPeter Brune 10108eab0cc1SPeter Brune 10118eab0cc1SPeter Brune #undef __FUNCT__ 10128eab0cc1SPeter Brune #define __FUNCT__ "PCGAMGClassicalFinalizePackage" 10138eab0cc1SPeter Brune PetscErrorCode PCGAMGClassicalFinalizePackage(void) 10148eab0cc1SPeter Brune { 10158eab0cc1SPeter Brune PetscErrorCode ierr; 10168eab0cc1SPeter Brune 10178eab0cc1SPeter Brune PetscFunctionBegin; 10188eab0cc1SPeter Brune PCGAMGClassicalPackageInitialized = PETSC_FALSE; 10198eab0cc1SPeter Brune ierr = PetscFunctionListDestroy(&PCGAMGClassicalProlongatorList);CHKERRQ(ierr); 10208eab0cc1SPeter Brune PetscFunctionReturn(0); 10218eab0cc1SPeter Brune } 10228eab0cc1SPeter Brune 10238eab0cc1SPeter Brune #undef __FUNCT__ 10248eab0cc1SPeter Brune #define __FUNCT__ "PCGAMGClassicalInitializePackage" 10258eab0cc1SPeter Brune PetscErrorCode PCGAMGClassicalInitializePackage(void) 10268eab0cc1SPeter Brune { 10278eab0cc1SPeter Brune PetscErrorCode ierr; 10288eab0cc1SPeter Brune 10298eab0cc1SPeter Brune PetscFunctionBegin; 10308eab0cc1SPeter Brune if (PCGAMGClassicalPackageInitialized) PetscFunctionReturn(0); 1031*7779008dSPeter Brune ierr = PetscFunctionListAdd(&PCGAMGClassicalProlongatorList,PCGAMGCLASSICALDIRECT,PCGAMGProlongator_Classical_Direct);CHKERRQ(ierr); 1032*7779008dSPeter Brune ierr = PetscFunctionListAdd(&PCGAMGClassicalProlongatorList,PCGAMGCLASSICALSTANDARD,PCGAMGProlongator_Classical_Standard);CHKERRQ(ierr); 10338eab0cc1SPeter Brune ierr = PetscRegisterFinalize(PCGAMGClassicalFinalizePackage);CHKERRQ(ierr); 10348eab0cc1SPeter Brune PetscFunctionReturn(0); 10358eab0cc1SPeter Brune } 10368eab0cc1SPeter Brune 10378e6d0c30SPeter Brune /* -------------------------------------------------------------------------- */ 10388e6d0c30SPeter Brune /* 10398e6d0c30SPeter Brune PCCreateGAMG_Classical 10408e6d0c30SPeter Brune 10418e6d0c30SPeter Brune */ 10428e6d0c30SPeter Brune #undef __FUNCT__ 10438e6d0c30SPeter Brune #define __FUNCT__ "PCCreateGAMG_Classical" 10448e6d0c30SPeter Brune PetscErrorCode PCCreateGAMG_Classical(PC pc) 10458e6d0c30SPeter Brune { 10468e6d0c30SPeter Brune PetscErrorCode ierr; 10478e6d0c30SPeter Brune PC_MG *mg = (PC_MG*)pc->data; 10488e6d0c30SPeter Brune PC_GAMG *pc_gamg = (PC_GAMG*)mg->innerctx; 10498e6d0c30SPeter Brune PC_GAMG_Classical *pc_gamg_classical; 10508e6d0c30SPeter Brune 10518e6d0c30SPeter Brune PetscFunctionBegin; 10528eab0cc1SPeter Brune ierr = PCGAMGClassicalInitializePackage(); 10538e6d0c30SPeter Brune if (pc_gamg->subctx) { 10548e6d0c30SPeter Brune /* call base class */ 10558e6d0c30SPeter Brune ierr = PCDestroy_GAMG(pc);CHKERRQ(ierr); 10568e6d0c30SPeter Brune } 10578e6d0c30SPeter Brune 10588e6d0c30SPeter Brune /* create sub context for SA */ 10598e6d0c30SPeter Brune ierr = PetscNewLog(pc, PC_GAMG_Classical, &pc_gamg_classical);CHKERRQ(ierr); 10608e6d0c30SPeter Brune pc_gamg->subctx = pc_gamg_classical; 10618e6d0c30SPeter Brune pc->ops->setfromoptions = PCGAMGSetFromOptions_Classical; 10628e6d0c30SPeter Brune /* reset does not do anything; setup not virtual */ 10638e6d0c30SPeter Brune 10648e6d0c30SPeter Brune /* set internal function pointers */ 10658e6d0c30SPeter Brune pc_gamg->ops->destroy = PCGAMGDestroy_Classical; 10668e6d0c30SPeter Brune pc_gamg->ops->graph = PCGAMGGraph_Classical; 10678e6d0c30SPeter Brune pc_gamg->ops->coarsen = PCGAMGCoarsen_Classical; 10688eab0cc1SPeter Brune pc_gamg->ops->prolongator = PCGAMGProlongator_Classical; 10698e6d0c30SPeter Brune pc_gamg->ops->optprol = NULL; 1070586a8384SPeter Brune pc_gamg->ops->setfromoptions = PCGAMGSetFromOptions_Classical; 10718e6d0c30SPeter Brune 10728e6d0c30SPeter Brune pc_gamg->ops->createdefaultdata = PCGAMGSetData_Classical; 1073586a8384SPeter Brune pc_gamg_classical->interp_threshold = 0.2; 10748eab0cc1SPeter Brune ierr = PetscObjectComposeFunction((PetscObject)pc,"PCGAMGClassicalSetType_C",PCGAMGClassicalSetType_GAMG);CHKERRQ(ierr); 1075*7779008dSPeter Brune ierr = PCGAMGClassicalSetType(pc,PCGAMGCLASSICALSTANDARD);CHKERRQ(ierr); 10768e6d0c30SPeter Brune PetscFunctionReturn(0); 10778e6d0c30SPeter Brune } 1078