xref: /petsc/src/ksp/pc/impls/is/pcis.c (revision 3050cee28ff83b093d983d7c5197e87b438ca09b)
1dba47a55SKris Buschelman #define PETSCKSP_DLL
223ce1328SBarry Smith 
3b4319ba4SBarry Smith #include "src/ksp/pc/impls/is/pcis.h"
4b4319ba4SBarry Smith 
5b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */
6b4319ba4SBarry Smith /*
7b4319ba4SBarry Smith    PCISSetUp -
8b4319ba4SBarry Smith */
9b4319ba4SBarry Smith #undef __FUNCT__
10b4319ba4SBarry Smith #define __FUNCT__ "PCISSetUp"
11dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCISSetUp(PC pc)
12b4319ba4SBarry Smith {
13b4319ba4SBarry Smith   PC_IS           *pcis = (PC_IS*)(pc->data);
14b4319ba4SBarry Smith   Mat_IS          *matis = (Mat_IS*)pc->mat->data;
1513f74950SBarry Smith   PetscInt        i;
166849ba73SBarry Smith   PetscErrorCode  ierr;
17b4319ba4SBarry Smith   PetscTruth      flg;
18b4319ba4SBarry Smith 
19b4319ba4SBarry Smith   PetscFunctionBegin;
20b4319ba4SBarry Smith   ierr = PetscTypeCompare((PetscObject)pc->mat,MATIS,&flg);CHKERRQ(ierr);
21b4319ba4SBarry Smith   if (!flg){
221302d50aSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONG,"Preconditioner type of Neumann Neumman requires matrix of type MATIS");
23b4319ba4SBarry Smith   }
24b4319ba4SBarry Smith 
25b4319ba4SBarry Smith   pcis->pure_neumann = matis->pure_neumann;
26b4319ba4SBarry Smith 
27b4319ba4SBarry Smith   /*
28b4319ba4SBarry Smith     Creating the local vector vec1_N, containing the inverse of the number
29b4319ba4SBarry Smith     of subdomains to which each local node (either owned or ghost)
30b4319ba4SBarry Smith     pertains. To accomplish that, we scatter local vectors of 1's to
31b4319ba4SBarry Smith     a global vector (adding the values); scatter the result back to
32b4319ba4SBarry Smith     local vectors and finally invert the result.
33b4319ba4SBarry Smith   */
34b4319ba4SBarry Smith   {
35b4319ba4SBarry Smith     Vec    counter;
36b4319ba4SBarry Smith     ierr = VecDuplicate(matis->x,&pcis->vec1_N);CHKERRQ(ierr);
3723ce1328SBarry Smith     ierr = MatGetVecs(pc->pmat,&counter,0);CHKERRQ(ierr); /* temporary auxiliar vector */
38efb30889SBarry Smith     ierr = VecSet(counter,0.0);CHKERRQ(ierr);
39efb30889SBarry Smith     ierr = VecSet(pcis->vec1_N,1.0);CHKERRQ(ierr);
40b4319ba4SBarry Smith     ierr = VecScatterBegin(pcis->vec1_N,counter,ADD_VALUES,SCATTER_REVERSE,matis->ctx);CHKERRQ(ierr);
41b4319ba4SBarry Smith     ierr = VecScatterEnd  (pcis->vec1_N,counter,ADD_VALUES,SCATTER_REVERSE,matis->ctx);CHKERRQ(ierr);
42b4319ba4SBarry Smith     ierr = VecScatterBegin(counter,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD,matis->ctx);CHKERRQ(ierr);
43b4319ba4SBarry Smith     ierr = VecScatterEnd  (counter,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD,matis->ctx);CHKERRQ(ierr);
44b4319ba4SBarry Smith     ierr = VecDestroy(counter);CHKERRQ(ierr);
45b4319ba4SBarry Smith   }
46b4319ba4SBarry Smith   /*
47b4319ba4SBarry Smith     Creating local and global index sets for interior and
48b4319ba4SBarry Smith     inteface nodes. Notice that interior nodes have D[i]==1.0.
49b4319ba4SBarry Smith   */
50b4319ba4SBarry Smith   {
5113f74950SBarry Smith     PetscInt     n_I;
5213f74950SBarry Smith     PetscInt    *idx_I_local,*idx_B_local,*idx_I_global,*idx_B_global;
53b4319ba4SBarry Smith     PetscScalar *array;
54b4319ba4SBarry Smith     /* Identifying interior and interface nodes, in local numbering */
55b4319ba4SBarry Smith     ierr = VecGetSize(pcis->vec1_N,&pcis->n);CHKERRQ(ierr);
56b4319ba4SBarry Smith     ierr = VecGetArray(pcis->vec1_N,&array);CHKERRQ(ierr);
5713f74950SBarry Smith     ierr = PetscMalloc(pcis->n*sizeof(PetscInt),&idx_I_local);CHKERRQ(ierr);
5813f74950SBarry Smith     ierr = PetscMalloc(pcis->n*sizeof(PetscInt),&idx_B_local);CHKERRQ(ierr);
59b4319ba4SBarry Smith     for (i=0, pcis->n_B=0, n_I=0; i<pcis->n; i++) {
60b4319ba4SBarry Smith       if (array[i] == 1.0) { idx_I_local[n_I]       = i; n_I++;       }
61b4319ba4SBarry Smith       else                 { idx_B_local[pcis->n_B] = i; pcis->n_B++; }
62b4319ba4SBarry Smith     }
63b4319ba4SBarry Smith     /* Getting the global numbering */
64b4319ba4SBarry Smith     idx_B_global = idx_I_local + n_I; /* Just avoiding allocating extra memory, since we have vacant space */
65b4319ba4SBarry Smith     idx_I_global = idx_B_local + pcis->n_B;
66b4319ba4SBarry Smith     ierr = ISLocalToGlobalMappingApply(matis->mapping,pcis->n_B,idx_B_local,idx_B_global);CHKERRQ(ierr);
67b4319ba4SBarry Smith     ierr = ISLocalToGlobalMappingApply(matis->mapping,n_I,      idx_I_local,idx_I_global);CHKERRQ(ierr);
68b4319ba4SBarry Smith     /* Creating the index sets. */
69b4319ba4SBarry Smith     ierr = ISCreateGeneral(MPI_COMM_SELF,pcis->n_B,idx_B_local, &pcis->is_B_local);CHKERRQ(ierr);
70b4319ba4SBarry Smith     ierr = ISCreateGeneral(MPI_COMM_SELF,pcis->n_B,idx_B_global,&pcis->is_B_global);CHKERRQ(ierr);
71b4319ba4SBarry Smith     ierr = ISCreateGeneral(MPI_COMM_SELF,n_I      ,idx_I_local, &pcis->is_I_local);CHKERRQ(ierr);
72b4319ba4SBarry Smith     ierr = ISCreateGeneral(MPI_COMM_SELF,n_I      ,idx_I_global,&pcis->is_I_global);CHKERRQ(ierr);
73b4319ba4SBarry Smith     /* Freeing memory and restoring arrays */
74b4319ba4SBarry Smith     ierr = PetscFree(idx_B_local);CHKERRQ(ierr);
75b4319ba4SBarry Smith     ierr = PetscFree(idx_I_local);CHKERRQ(ierr);
76b4319ba4SBarry Smith     ierr = VecRestoreArray(pcis->vec1_N,&array);CHKERRQ(ierr);
77b4319ba4SBarry Smith   }
78b4319ba4SBarry Smith 
79b4319ba4SBarry Smith   /*
80b4319ba4SBarry Smith     Extracting the blocks A_II, A_BI, A_IB and A_BB from A. If the numbering
81b4319ba4SBarry Smith     is such that interior nodes come first than the interface ones, we have
82b4319ba4SBarry Smith 
83b4319ba4SBarry Smith     [           |      ]
84b4319ba4SBarry Smith     [    A_II   | A_IB ]
85b4319ba4SBarry Smith     A = [           |      ]
86b4319ba4SBarry Smith     [-----------+------]
87b4319ba4SBarry Smith     [    A_BI   | A_BB ]
88b4319ba4SBarry Smith   */
89b4319ba4SBarry Smith 
90b4319ba4SBarry Smith   ierr = MatGetSubMatrix(matis->A,pcis->is_I_local,pcis->is_I_local,PETSC_DECIDE,MAT_INITIAL_MATRIX,&pcis->A_II);CHKERRQ(ierr);
91b4319ba4SBarry Smith   ierr = MatGetSubMatrix(matis->A,pcis->is_I_local,pcis->is_B_local,PETSC_DECIDE,MAT_INITIAL_MATRIX,&pcis->A_IB);CHKERRQ(ierr);
92b4319ba4SBarry Smith   ierr = MatGetSubMatrix(matis->A,pcis->is_B_local,pcis->is_I_local,PETSC_DECIDE,MAT_INITIAL_MATRIX,&pcis->A_BI);CHKERRQ(ierr);
93b4319ba4SBarry Smith   ierr = MatGetSubMatrix(matis->A,pcis->is_B_local,pcis->is_B_local,PETSC_DECIDE,MAT_INITIAL_MATRIX,&pcis->A_BB);CHKERRQ(ierr);
94b4319ba4SBarry Smith 
95b4319ba4SBarry Smith   /*
96b4319ba4SBarry Smith     Creating work vectors and arrays
97b4319ba4SBarry Smith   */
98b4319ba4SBarry Smith   /* pcis->vec1_N has already been created */
99b4319ba4SBarry Smith   ierr = VecDuplicate(pcis->vec1_N,&pcis->vec2_N);CHKERRQ(ierr);
100b4319ba4SBarry Smith   ierr = VecCreateSeq(PETSC_COMM_SELF,pcis->n-pcis->n_B,&pcis->vec1_D);CHKERRQ(ierr);
101b4319ba4SBarry Smith   ierr = VecDuplicate(pcis->vec1_D,&pcis->vec2_D);CHKERRQ(ierr);
102b4319ba4SBarry Smith   ierr = VecDuplicate(pcis->vec1_D,&pcis->vec3_D);CHKERRQ(ierr);
103b4319ba4SBarry Smith   ierr = VecCreateSeq(PETSC_COMM_SELF,pcis->n_B,&pcis->vec1_B);CHKERRQ(ierr);
104b4319ba4SBarry Smith   ierr = VecDuplicate(pcis->vec1_B,&pcis->vec2_B);CHKERRQ(ierr);
105b4319ba4SBarry Smith   ierr = VecDuplicate(pcis->vec1_B,&pcis->vec3_B);CHKERRQ(ierr);
10623ce1328SBarry Smith   ierr = MatGetVecs(pc->pmat,&pcis->vec1_global,0);CHKERRQ(ierr);
107b4319ba4SBarry Smith   ierr = PetscMalloc((pcis->n)*sizeof(PetscScalar),&pcis->work_N);CHKERRQ(ierr);
108b4319ba4SBarry Smith 
109b4319ba4SBarry Smith   /* Creating the scatter contexts */
11023ce1328SBarry Smith   ierr = VecScatterCreate(pcis->vec1_global,pcis->is_I_global,pcis->vec1_D,(IS)0,&pcis->global_to_D);CHKERRQ(ierr);
111b4319ba4SBarry Smith   ierr = VecScatterCreate(pcis->vec1_N,pcis->is_B_local,pcis->vec1_B,(IS)0,&pcis->N_to_B);CHKERRQ(ierr);
11223ce1328SBarry Smith   ierr = VecScatterCreate(pcis->vec1_global,pcis->is_B_global,pcis->vec1_B,(IS)0,&pcis->global_to_B);CHKERRQ(ierr);
113b4319ba4SBarry Smith 
114b4319ba4SBarry Smith   /* Creating scaling "matrix" D, from information in vec1_N */
115b4319ba4SBarry Smith   ierr = VecDuplicate(pcis->vec1_B,&pcis->D);CHKERRQ(ierr);
116b4319ba4SBarry Smith   ierr = VecScatterBegin(pcis->vec1_N,pcis->D,INSERT_VALUES,SCATTER_FORWARD,pcis->N_to_B);CHKERRQ(ierr);
117b4319ba4SBarry Smith   ierr = VecScatterEnd  (pcis->vec1_N,pcis->D,INSERT_VALUES,SCATTER_FORWARD,pcis->N_to_B);CHKERRQ(ierr);
118b4319ba4SBarry Smith   ierr = VecReciprocal(pcis->D);CHKERRQ(ierr);
119b4319ba4SBarry Smith 
120b4319ba4SBarry Smith   /* See historical note 01, at the bottom of this file. */
121b4319ba4SBarry Smith 
122b4319ba4SBarry Smith   /*
123b4319ba4SBarry Smith     Creating the KSP contexts for the local Dirichlet and Neumann problems.
124b4319ba4SBarry Smith   */
125b4319ba4SBarry Smith   {
126b4319ba4SBarry Smith     PC  pc_ctx;
127b4319ba4SBarry Smith     /* Dirichlet */
128b4319ba4SBarry Smith     ierr = KSPCreate(PETSC_COMM_SELF,&pcis->ksp_D);CHKERRQ(ierr);
129b4319ba4SBarry Smith     ierr = KSPSetOperators(pcis->ksp_D,pcis->A_II,pcis->A_II,SAME_PRECONDITIONER);CHKERRQ(ierr);
130b4319ba4SBarry Smith     ierr = KSPSetOptionsPrefix(pcis->ksp_D,"is_localD_");CHKERRQ(ierr);
131b4319ba4SBarry Smith     ierr = KSPGetPC(pcis->ksp_D,&pc_ctx);CHKERRQ(ierr);
132b4319ba4SBarry Smith     ierr = PCSetType(pc_ctx,PCLU);CHKERRQ(ierr);
133b4319ba4SBarry Smith     ierr = KSPSetType(pcis->ksp_D,KSPPREONLY);CHKERRQ(ierr);
134b4319ba4SBarry Smith     ierr = KSPSetFromOptions(pcis->ksp_D);CHKERRQ(ierr);
135b4319ba4SBarry Smith     /* the vectors in the following line are dummy arguments, just telling the KSP the vector size. Values are not used */
136b4319ba4SBarry Smith     ierr = KSPSetUp(pcis->ksp_D);CHKERRQ(ierr);
137b4319ba4SBarry Smith     /* Neumann */
138b4319ba4SBarry Smith     ierr = KSPCreate(PETSC_COMM_SELF,&pcis->ksp_N);CHKERRQ(ierr);
139b4319ba4SBarry Smith     ierr = KSPSetOperators(pcis->ksp_N,matis->A,matis->A,SAME_PRECONDITIONER);CHKERRQ(ierr);
140b4319ba4SBarry Smith     ierr = KSPSetOptionsPrefix(pcis->ksp_N,"is_localN_");CHKERRQ(ierr);
141b4319ba4SBarry Smith     ierr = KSPGetPC(pcis->ksp_N,&pc_ctx);CHKERRQ(ierr);
142b4319ba4SBarry Smith     ierr = PCSetType(pc_ctx,PCLU);CHKERRQ(ierr);
143b4319ba4SBarry Smith     ierr = KSPSetType(pcis->ksp_N,KSPPREONLY);CHKERRQ(ierr);
144b4319ba4SBarry Smith     ierr = KSPSetFromOptions(pcis->ksp_N);CHKERRQ(ierr);
145b4319ba4SBarry Smith     {
146b4319ba4SBarry Smith       PetscTruth damp_fixed,
147b4319ba4SBarry Smith                  remove_nullspace_fixed,
148b4319ba4SBarry Smith                  set_damping_factor_floating,
149b4319ba4SBarry Smith                  not_damp_floating,
150b4319ba4SBarry Smith                  not_remove_nullspace_floating;
151b4319ba4SBarry Smith       PetscReal  fixed_factor,
152b4319ba4SBarry Smith                  floating_factor;
153b4319ba4SBarry Smith 
154b4319ba4SBarry Smith       ierr = PetscOptionsGetReal(pc_ctx->prefix,"-pc_is_damp_fixed",&fixed_factor,&damp_fixed);CHKERRQ(ierr);
155b4319ba4SBarry Smith       if (!damp_fixed) { fixed_factor = 0.0; }
156b4319ba4SBarry Smith       ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_damp_fixed",&damp_fixed);CHKERRQ(ierr);
157b4319ba4SBarry Smith 
158b4319ba4SBarry Smith       ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_remove_nullspace_fixed",&remove_nullspace_fixed);CHKERRQ(ierr);
159b4319ba4SBarry Smith 
160b4319ba4SBarry Smith       ierr = PetscOptionsGetReal(pc_ctx->prefix,"-pc_is_set_damping_factor_floating",
161b4319ba4SBarry Smith 			      &floating_factor,&set_damping_factor_floating);CHKERRQ(ierr);
162b4319ba4SBarry Smith       if (!set_damping_factor_floating) { floating_factor = 0.0; }
163b4319ba4SBarry Smith       ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_set_damping_factor_floating",&set_damping_factor_floating);CHKERRQ(ierr);
164b4319ba4SBarry Smith       if (!set_damping_factor_floating) { floating_factor = 1.e-12; }
165b4319ba4SBarry Smith 
166b4319ba4SBarry Smith       ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_not_damp_floating",&not_damp_floating);CHKERRQ(ierr);
167b4319ba4SBarry Smith 
168b4319ba4SBarry Smith       ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_not_remove_nullspace_floating",&not_remove_nullspace_floating);CHKERRQ(ierr);
169b4319ba4SBarry Smith 
170b4319ba4SBarry Smith       if (pcis->pure_neumann) {  /* floating subdomain */
171b4319ba4SBarry Smith 	if (!(not_damp_floating)) {
172afaefe49SHong Zhang           ierr = PCFactorSetShiftNonzero(pc_ctx,floating_factor);CHKERRQ(ierr);
173b4319ba4SBarry Smith 	}
174b4319ba4SBarry Smith 	if (!(not_remove_nullspace_floating)){
175b4319ba4SBarry Smith 	  MatNullSpace nullsp;
176ee512c37SSatish Balay 	  ierr = MatNullSpaceCreate(PETSC_COMM_SELF,PETSC_TRUE,0,PETSC_NULL,&nullsp);CHKERRQ(ierr);
177d8fd42c4SBarry Smith 	  ierr = KSPSetNullSpace(pcis->ksp_N,nullsp);CHKERRQ(ierr);
178b4319ba4SBarry Smith 	  ierr = MatNullSpaceDestroy(nullsp);CHKERRQ(ierr);
179b4319ba4SBarry Smith 	}
180b4319ba4SBarry Smith       } else {  /* fixed subdomain */
181b4319ba4SBarry Smith 	if (damp_fixed) {
182afaefe49SHong Zhang           ierr = PCFactorSetShiftNonzero(pc_ctx,fixed_factor);CHKERRQ(ierr);
183b4319ba4SBarry Smith 	}
184b4319ba4SBarry Smith 	if (remove_nullspace_fixed) {
185b4319ba4SBarry Smith 	  MatNullSpace nullsp;
186ee512c37SSatish Balay 	  ierr = MatNullSpaceCreate(PETSC_COMM_SELF,PETSC_TRUE,0,PETSC_NULL,&nullsp);CHKERRQ(ierr);
187d8fd42c4SBarry Smith 	  ierr = KSPSetNullSpace(pcis->ksp_N,nullsp);CHKERRQ(ierr);
188b4319ba4SBarry Smith 	  ierr = MatNullSpaceDestroy(nullsp);CHKERRQ(ierr);
189b4319ba4SBarry Smith 	}
190b4319ba4SBarry Smith       }
191b4319ba4SBarry Smith     }
192b4319ba4SBarry Smith     /* the vectors in the following line are dummy arguments, just telling the KSP the vector size. Values are not used */
193b4319ba4SBarry Smith     ierr = KSPSetUp(pcis->ksp_N);CHKERRQ(ierr);
194b4319ba4SBarry Smith   }
195b4319ba4SBarry Smith 
1967c334f02SBarry Smith   ierr = ISLocalToGlobalMappingGetInfo(((Mat_IS*)(pc->mat->data))->mapping,&(pcis->n_neigh),&(pcis->neigh),&(pcis->n_shared),&(pcis->shared));CHKERRQ(ierr);
197b4319ba4SBarry Smith   pcis->ISLocalToGlobalMappingGetInfoWasCalled = PETSC_TRUE;
198b4319ba4SBarry Smith   PetscFunctionReturn(0);
199b4319ba4SBarry Smith }
200b4319ba4SBarry Smith 
201b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */
202b4319ba4SBarry Smith /*
203b4319ba4SBarry Smith    PCISDestroy -
204b4319ba4SBarry Smith */
205b4319ba4SBarry Smith #undef __FUNCT__
206b4319ba4SBarry Smith #define __FUNCT__ "PCISDestroy"
207dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCISDestroy(PC pc)
208b4319ba4SBarry Smith {
209b4319ba4SBarry Smith   PC_IS          *pcis = (PC_IS*)(pc->data);
210dfbe8321SBarry Smith   PetscErrorCode ierr;
211b4319ba4SBarry Smith 
212b4319ba4SBarry Smith   PetscFunctionBegin;
213b4319ba4SBarry Smith   if (pcis->is_B_local)  {ierr = ISDestroy(pcis->is_B_local);CHKERRQ(ierr);}
214b4319ba4SBarry Smith   if (pcis->is_I_local)  {ierr = ISDestroy(pcis->is_I_local);CHKERRQ(ierr);}
215b4319ba4SBarry Smith   if (pcis->is_B_global) {ierr = ISDestroy(pcis->is_B_global);CHKERRQ(ierr);}
216b4319ba4SBarry Smith   if (pcis->is_I_global) {ierr = ISDestroy(pcis->is_I_global);CHKERRQ(ierr);}
217b4319ba4SBarry Smith   if (pcis->A_II)        {ierr = MatDestroy(pcis->A_II);CHKERRQ(ierr);}
218b4319ba4SBarry Smith   if (pcis->A_IB)        {ierr = MatDestroy(pcis->A_IB);CHKERRQ(ierr);}
219b4319ba4SBarry Smith   if (pcis->A_BI)        {ierr = MatDestroy(pcis->A_BI);CHKERRQ(ierr);}
220b4319ba4SBarry Smith   if (pcis->A_BB)        {ierr = MatDestroy(pcis->A_BB);CHKERRQ(ierr);}
221b4319ba4SBarry Smith   if (pcis->D)           {ierr = VecDestroy(pcis->D);CHKERRQ(ierr);}
222b4319ba4SBarry Smith   if (pcis->ksp_N)      {ierr = KSPDestroy(pcis->ksp_N);CHKERRQ(ierr);}
223b4319ba4SBarry Smith   if (pcis->ksp_D)      {ierr = KSPDestroy(pcis->ksp_D);CHKERRQ(ierr);}
224b4319ba4SBarry Smith   if (pcis->vec1_N)      {ierr = VecDestroy(pcis->vec1_N);CHKERRQ(ierr);}
225b4319ba4SBarry Smith   if (pcis->vec2_N)      {ierr = VecDestroy(pcis->vec2_N);CHKERRQ(ierr);}
226b4319ba4SBarry Smith   if (pcis->vec1_D)      {ierr = VecDestroy(pcis->vec1_D);CHKERRQ(ierr);}
227b4319ba4SBarry Smith   if (pcis->vec2_D)      {ierr = VecDestroy(pcis->vec2_D);CHKERRQ(ierr);}
228b4319ba4SBarry Smith   if (pcis->vec3_D)      {ierr = VecDestroy(pcis->vec3_D);CHKERRQ(ierr);}
229b4319ba4SBarry Smith   if (pcis->vec1_B)      {ierr = VecDestroy(pcis->vec1_B);CHKERRQ(ierr);}
230b4319ba4SBarry Smith   if (pcis->vec2_B)      {ierr = VecDestroy(pcis->vec2_B);CHKERRQ(ierr);}
231b4319ba4SBarry Smith   if (pcis->vec3_B)      {ierr = VecDestroy(pcis->vec3_B);CHKERRQ(ierr);}
232b4319ba4SBarry Smith   if (pcis->vec1_global) {ierr = VecDestroy(pcis->vec1_global);CHKERRQ(ierr);}
233b4319ba4SBarry Smith   if (pcis->global_to_D) {ierr = VecScatterDestroy(pcis->global_to_D);CHKERRQ(ierr);}
234b4319ba4SBarry Smith   if (pcis->N_to_B)      {ierr = VecScatterDestroy(pcis->N_to_B);CHKERRQ(ierr);}
235b4319ba4SBarry Smith   if (pcis->global_to_B) {ierr = VecScatterDestroy(pcis->global_to_B);CHKERRQ(ierr);}
23605b42c5fSBarry Smith   ierr = PetscFree(pcis->work_N);CHKERRQ(ierr);
237b4319ba4SBarry Smith   if (pcis->ISLocalToGlobalMappingGetInfoWasCalled) {
238b4319ba4SBarry Smith     ierr = ISLocalToGlobalMappingRestoreInfo((ISLocalToGlobalMapping)0,&(pcis->n_neigh),&(pcis->neigh),&(pcis->n_shared),&(pcis->shared));CHKERRQ(ierr);
239b4319ba4SBarry Smith   }
240b4319ba4SBarry Smith   PetscFunctionReturn(0);
241b4319ba4SBarry Smith }
242b4319ba4SBarry Smith 
243b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */
244b4319ba4SBarry Smith /*
245b4319ba4SBarry Smith    PCISCreate -
246b4319ba4SBarry Smith */
247b4319ba4SBarry Smith #undef __FUNCT__
248b4319ba4SBarry Smith #define __FUNCT__ "PCISCreate"
249dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCISCreate(PC pc)
250b4319ba4SBarry Smith {
251b4319ba4SBarry Smith   PC_IS *pcis = (PC_IS*)(pc->data);
252b4319ba4SBarry Smith 
253b4319ba4SBarry Smith   PetscFunctionBegin;
254b4319ba4SBarry Smith   pcis->is_B_local  = 0;
255b4319ba4SBarry Smith   pcis->is_I_local  = 0;
256b4319ba4SBarry Smith   pcis->is_B_global = 0;
257b4319ba4SBarry Smith   pcis->is_I_global = 0;
258b4319ba4SBarry Smith   pcis->A_II        = 0;
259b4319ba4SBarry Smith   pcis->A_IB        = 0;
260b4319ba4SBarry Smith   pcis->A_BI        = 0;
261b4319ba4SBarry Smith   pcis->A_BB        = 0;
262b4319ba4SBarry Smith   pcis->D           = 0;
263b4319ba4SBarry Smith   pcis->ksp_N      = 0;
264b4319ba4SBarry Smith   pcis->ksp_D      = 0;
265b4319ba4SBarry Smith   pcis->vec1_N      = 0;
266b4319ba4SBarry Smith   pcis->vec2_N      = 0;
267b4319ba4SBarry Smith   pcis->vec1_D      = 0;
268b4319ba4SBarry Smith   pcis->vec2_D      = 0;
269b4319ba4SBarry Smith   pcis->vec3_D      = 0;
270b4319ba4SBarry Smith   pcis->vec1_B      = 0;
271b4319ba4SBarry Smith   pcis->vec2_B      = 0;
272b4319ba4SBarry Smith   pcis->vec3_B      = 0;
273b4319ba4SBarry Smith   pcis->vec1_global = 0;
274b4319ba4SBarry Smith   pcis->work_N      = 0;
275b4319ba4SBarry Smith   pcis->global_to_D = 0;
276b4319ba4SBarry Smith   pcis->N_to_B      = 0;
277b4319ba4SBarry Smith   pcis->global_to_B = 0;
278b4319ba4SBarry Smith   pcis->ISLocalToGlobalMappingGetInfoWasCalled = PETSC_FALSE;
279b4319ba4SBarry Smith   PetscFunctionReturn(0);
280b4319ba4SBarry Smith }
281b4319ba4SBarry Smith 
282b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */
283b4319ba4SBarry Smith /*
284b4319ba4SBarry Smith    PCISApplySchur -
285b4319ba4SBarry Smith 
286b4319ba4SBarry Smith    Input parameters:
287b4319ba4SBarry Smith .  pc - preconditioner context
288b4319ba4SBarry Smith .  v - vector to which the Schur complement is to be applied (it is NOT modified inside this function, UNLESS vec2_B is null)
289b4319ba4SBarry Smith 
290b4319ba4SBarry Smith    Output parameters:
291b4319ba4SBarry Smith .  vec1_B - result of Schur complement applied to chunk
292b4319ba4SBarry Smith .  vec2_B - garbage (used as work space), or null (and v is used as workspace)
293b4319ba4SBarry Smith .  vec1_D - garbage (used as work space)
294b4319ba4SBarry Smith .  vec2_D - garbage (used as work space)
295b4319ba4SBarry Smith 
296b4319ba4SBarry Smith */
297b4319ba4SBarry Smith #undef __FUNCT__
298b4319ba4SBarry Smith #define __FUNCT__ "PCIterSuApplySchur"
299dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCISApplySchur(PC pc, Vec v, Vec vec1_B, Vec vec2_B, Vec vec1_D, Vec vec2_D)
300b4319ba4SBarry Smith {
301dfbe8321SBarry Smith   PetscErrorCode ierr;
302b4319ba4SBarry Smith   PC_IS          *pcis = (PC_IS*)(pc->data);
303b4319ba4SBarry Smith 
304b4319ba4SBarry Smith   PetscFunctionBegin;
30513f74950SBarry Smith   if (!vec2_B) { vec2_B = v; }
306b4319ba4SBarry Smith 
307b4319ba4SBarry Smith   ierr = MatMult(pcis->A_BB,v,vec1_B);CHKERRQ(ierr);
308b4319ba4SBarry Smith   ierr = MatMult(pcis->A_IB,v,vec1_D);CHKERRQ(ierr);
30923ce1328SBarry Smith   ierr = KSPSolve(pcis->ksp_D,vec1_D,vec2_D);CHKERRQ(ierr);
310b4319ba4SBarry Smith   ierr = MatMult(pcis->A_BI,vec2_D,vec2_B);CHKERRQ(ierr);
311efb30889SBarry Smith   ierr = VecAXPY(vec1_B,-1.0,vec2_B);CHKERRQ(ierr);
312b4319ba4SBarry Smith   PetscFunctionReturn(0);
313b4319ba4SBarry Smith }
314b4319ba4SBarry Smith 
315b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */
316b4319ba4SBarry Smith /*
317b4319ba4SBarry Smith    PCISScatterArrayNToVecB - Scatters interface node values from a big array (of all local nodes, interior or interface,
318b4319ba4SBarry Smith    including ghosts) into an interface vector, when in SCATTER_FORWARD mode, or vice-versa, when in SCATTER_REVERSE
319b4319ba4SBarry Smith    mode.
320b4319ba4SBarry Smith 
321b4319ba4SBarry Smith    Input parameters:
322b4319ba4SBarry Smith .  pc - preconditioner context
323b4319ba4SBarry Smith .  array_N - [when in SCATTER_FORWARD mode] Array to be scattered into the vector
324b4319ba4SBarry Smith .  v_B - [when in SCATTER_REVERSE mode] Vector to be scattered into the array
325b4319ba4SBarry Smith 
326b4319ba4SBarry Smith    Output parameter:
327b4319ba4SBarry Smith .  array_N - [when in SCATTER_REVERSE mode] Array to receive the scattered vector
328b4319ba4SBarry Smith .  v_B - [when in SCATTER_FORWARD mode] Vector to receive the scattered array
329b4319ba4SBarry Smith 
330b4319ba4SBarry Smith    Notes:
331b4319ba4SBarry Smith    The entries in the array that do not correspond to interface nodes remain unaltered.
332b4319ba4SBarry Smith */
333b4319ba4SBarry Smith #undef __FUNCT__
334b4319ba4SBarry Smith #define __FUNCT__ "PCISScatterArrayNToVecB"
335dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCISScatterArrayNToVecB (PetscScalar *array_N, Vec v_B, InsertMode imode, ScatterMode smode, PC pc)
336b4319ba4SBarry Smith {
33713f74950SBarry Smith   PetscInt       i, *idex;
3386849ba73SBarry Smith   PetscErrorCode ierr;
339b4319ba4SBarry Smith   PetscScalar    *array_B;
340b4319ba4SBarry Smith   PC_IS          *pcis = (PC_IS*)(pc->data);
341b4319ba4SBarry Smith 
342b4319ba4SBarry Smith   PetscFunctionBegin;
343b4319ba4SBarry Smith   ierr = VecGetArray(v_B,&array_B);CHKERRQ(ierr);
344b4319ba4SBarry Smith   ierr = ISGetIndices(pcis->is_B_local,&idex);CHKERRQ(ierr);
345b4319ba4SBarry Smith 
346b4319ba4SBarry Smith   if (smode == SCATTER_FORWARD) {
347b4319ba4SBarry Smith     if (imode == INSERT_VALUES) {
348b4319ba4SBarry Smith       for (i=0; i<pcis->n_B; i++) { array_B[i]  = array_N[idex[i]]; }
349b4319ba4SBarry Smith     } else {  /* ADD_VALUES */
350b4319ba4SBarry Smith       for (i=0; i<pcis->n_B; i++) { array_B[i] += array_N[idex[i]]; }
351b4319ba4SBarry Smith     }
352b4319ba4SBarry Smith   } else {  /* SCATTER_REVERSE */
353b4319ba4SBarry Smith     if (imode == INSERT_VALUES) {
354b4319ba4SBarry Smith       for (i=0; i<pcis->n_B; i++) { array_N[idex[i]]  = array_B[i]; }
355b4319ba4SBarry Smith     } else {  /* ADD_VALUES */
356b4319ba4SBarry Smith       for (i=0; i<pcis->n_B; i++) { array_N[idex[i]] += array_B[i]; }
357b4319ba4SBarry Smith     }
358b4319ba4SBarry Smith   }
359b4319ba4SBarry Smith   ierr = ISRestoreIndices(pcis->is_B_local,&idex);CHKERRQ(ierr);
360b4319ba4SBarry Smith   ierr = VecRestoreArray(v_B,&array_B);CHKERRQ(ierr);
361b4319ba4SBarry Smith   PetscFunctionReturn(0);
362b4319ba4SBarry Smith }
363b4319ba4SBarry Smith 
364b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */
365b4319ba4SBarry Smith /*
366b4319ba4SBarry Smith    PCISApplyInvSchur - Solves the Neumann problem related to applying the inverse of the Schur complement.
367b4319ba4SBarry Smith    More precisely, solves the problem:
368b4319ba4SBarry Smith                                         [ A_II  A_IB ] [ . ]   [ 0 ]
369b4319ba4SBarry Smith                                         [            ] [   ] = [   ]
370b4319ba4SBarry Smith                                         [ A_BI  A_BB ] [ x ]   [ b ]
371b4319ba4SBarry Smith 
372b4319ba4SBarry Smith    Input parameters:
373b4319ba4SBarry Smith .  pc - preconditioner context
374b4319ba4SBarry Smith .  b - vector of local interface nodes (including ghosts)
375b4319ba4SBarry Smith 
376b4319ba4SBarry Smith    Output parameters:
377b4319ba4SBarry Smith .  x - vector of local interface nodes (including ghosts); returns the application of the inverse of the Schur
378b4319ba4SBarry Smith        complement to b
379b4319ba4SBarry Smith .  vec1_N - vector of local nodes (interior and interface, including ghosts); returns garbage (used as work space)
380b4319ba4SBarry Smith .  vec2_N - vector of local nodes (interior and interface, including ghosts); returns garbage (used as work space)
381b4319ba4SBarry Smith 
382b4319ba4SBarry Smith */
383b4319ba4SBarry Smith #undef __FUNCT__
384b4319ba4SBarry Smith #define __FUNCT__ "PCISApplyInvSchur"
385dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCISApplyInvSchur (PC pc, Vec b, Vec x, Vec vec1_N, Vec vec2_N)
386b4319ba4SBarry Smith {
387dfbe8321SBarry Smith   PetscErrorCode ierr;
388b4319ba4SBarry Smith   PC_IS          *pcis = (PC_IS*)(pc->data);
389b4319ba4SBarry Smith 
390b4319ba4SBarry Smith   PetscFunctionBegin;
391b4319ba4SBarry Smith   /*
392b4319ba4SBarry Smith     Neumann solvers.
393b4319ba4SBarry Smith     Applying the inverse of the local Schur complement, i.e, solving a Neumann
394b4319ba4SBarry Smith     Problem with zero at the interior nodes of the RHS and extracting the interface
395b4319ba4SBarry Smith     part of the solution. inverse Schur complement is applied to b and the result
396b4319ba4SBarry Smith     is stored in x.
397b4319ba4SBarry Smith   */
398b4319ba4SBarry Smith   /* Setting the RHS vec1_N */
399efb30889SBarry Smith   ierr = VecSet(vec1_N,0.0);CHKERRQ(ierr);
400b4319ba4SBarry Smith   ierr = VecScatterBegin(b,vec1_N,INSERT_VALUES,SCATTER_REVERSE,pcis->N_to_B);CHKERRQ(ierr);
401b4319ba4SBarry Smith   ierr = VecScatterEnd  (b,vec1_N,INSERT_VALUES,SCATTER_REVERSE,pcis->N_to_B);CHKERRQ(ierr);
402b4319ba4SBarry Smith   /* Checking for consistency of the RHS */
403b4319ba4SBarry Smith   {
404b4319ba4SBarry Smith     PetscTruth flg;
405b4319ba4SBarry Smith     ierr = PetscOptionsHasName(PETSC_NULL,"-pc_is_check_consistency",&flg);CHKERRQ(ierr);
406b4319ba4SBarry Smith     if (flg) {
407b4319ba4SBarry Smith       PetscScalar average;
408*3050cee2SBarry Smith       PetscViewer viewer;
409*3050cee2SBarry Smith       ierr = PetscViewerASCIIGetStdout(pc->comm,&viewer);CHKERRQ(ierr);
410*3050cee2SBarry Smith 
411b4319ba4SBarry Smith       ierr = VecSum(vec1_N,&average);CHKERRQ(ierr);
412b4319ba4SBarry Smith       average = average / ((PetscReal)pcis->n);
413b4319ba4SBarry Smith       if (pcis->pure_neumann) {
414*3050cee2SBarry Smith 
415*3050cee2SBarry Smith         ierr = PetscViewerASCIISynchronizedPrintf(viewer,"Subdomain %04d is floating. Average = % 1.14e\n",
416b4319ba4SBarry Smith                                              PetscGlobalRank,PetscAbsScalar(average));CHKERRQ(ierr);
417b4319ba4SBarry Smith       } else {
418*3050cee2SBarry Smith         ierr = PetscViewerASCIISynchronizedPrintf(viewer,"Subdomain %04d is fixed.    Average = % 1.14e\n",
419b4319ba4SBarry Smith                                              PetscGlobalRank,PetscAbsScalar(average));CHKERRQ(ierr);
420b4319ba4SBarry Smith       }
421*3050cee2SBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
422b4319ba4SBarry Smith     }
423b4319ba4SBarry Smith   }
424b4319ba4SBarry Smith   /* Solving the system for vec2_N */
42523ce1328SBarry Smith   ierr = KSPSolve(pcis->ksp_N,vec1_N,vec2_N);CHKERRQ(ierr);
426b4319ba4SBarry Smith   /* Extracting the local interface vector out of the solution */
427b4319ba4SBarry Smith   ierr = VecScatterBegin(vec2_N,x,INSERT_VALUES,SCATTER_FORWARD,pcis->N_to_B);CHKERRQ(ierr);
428b4319ba4SBarry Smith   ierr = VecScatterEnd  (vec2_N,x,INSERT_VALUES,SCATTER_FORWARD,pcis->N_to_B);CHKERRQ(ierr);
429b4319ba4SBarry Smith   PetscFunctionReturn(0);
430b4319ba4SBarry Smith }
431b4319ba4SBarry Smith 
432b4319ba4SBarry Smith 
433b4319ba4SBarry Smith 
434b4319ba4SBarry Smith 
435b4319ba4SBarry Smith 
436b4319ba4SBarry Smith 
437b4319ba4SBarry Smith 
438b4319ba4SBarry Smith 
439b4319ba4SBarry Smith 
440