xref: /petsc/src/ksp/pc/impls/is/pcis.c (revision 6849ba73f22fecb8f92ef896a42e4e8bd4cd6965)
123ce1328SBarry Smith 
2b4319ba4SBarry Smith #include "src/ksp/pc/impls/is/pcis.h"
3b4319ba4SBarry Smith 
4b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */
5b4319ba4SBarry Smith /*
6b4319ba4SBarry Smith    PCISSetUp -
7b4319ba4SBarry Smith */
8b4319ba4SBarry Smith #undef __FUNCT__
9b4319ba4SBarry Smith #define __FUNCT__ "PCISSetUp"
10dfbe8321SBarry Smith PetscErrorCode PCISSetUp(PC pc)
11b4319ba4SBarry Smith {
12b4319ba4SBarry Smith   PC_IS      *pcis = (PC_IS*)(pc->data);
13b4319ba4SBarry Smith   Mat_IS     *matis = (Mat_IS*)pc->mat->data;
14*6849ba73SBarry Smith   int        i;
15*6849ba73SBarry Smith   PetscErrorCode  ierr;
16b4319ba4SBarry Smith   PetscTruth flg;
17b4319ba4SBarry Smith 
18b4319ba4SBarry Smith   PetscFunctionBegin;
19b4319ba4SBarry Smith   ierr = PetscTypeCompare((PetscObject)pc->mat,MATIS,&flg);CHKERRQ(ierr);
20b4319ba4SBarry Smith   if (!flg){
21b4319ba4SBarry Smith     SETERRQ(1,"Preconditioner type of Neumann Neumman requires matrix of type MATIS");
22b4319ba4SBarry Smith   }
23b4319ba4SBarry Smith 
24b4319ba4SBarry Smith   pcis->pure_neumann = matis->pure_neumann;
25b4319ba4SBarry Smith 
26b4319ba4SBarry Smith   /*
27b4319ba4SBarry Smith     Creating the local vector vec1_N, containing the inverse of the number
28b4319ba4SBarry Smith     of subdomains to which each local node (either owned or ghost)
29b4319ba4SBarry Smith     pertains. To accomplish that, we scatter local vectors of 1's to
30b4319ba4SBarry Smith     a global vector (adding the values); scatter the result back to
31b4319ba4SBarry Smith     local vectors and finally invert the result.
32b4319ba4SBarry Smith   */
33b4319ba4SBarry Smith   {
34b4319ba4SBarry Smith     Vec    counter;
35b4319ba4SBarry Smith     PetscScalar one=1.0, zero=0.0;
36b4319ba4SBarry Smith     ierr = VecDuplicate(matis->x,&pcis->vec1_N);CHKERRQ(ierr);
3723ce1328SBarry Smith     ierr = MatGetVecs(pc->pmat,&counter,0);CHKERRQ(ierr); /* temporary auxiliar vector */
38b4319ba4SBarry Smith     ierr = VecSet(&zero,counter);CHKERRQ(ierr);
39b4319ba4SBarry Smith     ierr = VecSet(&one,pcis->vec1_N);CHKERRQ(ierr);
40b4319ba4SBarry Smith     ierr = VecScatterBegin(pcis->vec1_N,counter,ADD_VALUES,SCATTER_REVERSE,matis->ctx);CHKERRQ(ierr);
41b4319ba4SBarry Smith     ierr = VecScatterEnd  (pcis->vec1_N,counter,ADD_VALUES,SCATTER_REVERSE,matis->ctx);CHKERRQ(ierr);
42b4319ba4SBarry Smith     ierr = VecScatterBegin(counter,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD,matis->ctx);CHKERRQ(ierr);
43b4319ba4SBarry Smith     ierr = VecScatterEnd  (counter,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD,matis->ctx);CHKERRQ(ierr);
44b4319ba4SBarry Smith     ierr = VecDestroy(counter);CHKERRQ(ierr);
45b4319ba4SBarry Smith   }
46b4319ba4SBarry Smith   /*
47b4319ba4SBarry Smith     Creating local and global index sets for interior and
48b4319ba4SBarry Smith     inteface nodes. Notice that interior nodes have D[i]==1.0.
49b4319ba4SBarry Smith   */
50b4319ba4SBarry Smith   {
51b4319ba4SBarry Smith     int     n_I;
52b4319ba4SBarry Smith     int    *idx_I_local,*idx_B_local,*idx_I_global,*idx_B_global;
53b4319ba4SBarry Smith     PetscScalar *array;
54b4319ba4SBarry Smith     /* Identifying interior and interface nodes, in local numbering */
55b4319ba4SBarry Smith     ierr = VecGetSize(pcis->vec1_N,&pcis->n);CHKERRQ(ierr);
56b4319ba4SBarry Smith     ierr = VecGetArray(pcis->vec1_N,&array);CHKERRQ(ierr);
57b4319ba4SBarry Smith     ierr = PetscMalloc(pcis->n*sizeof(int),&idx_I_local);CHKERRQ(ierr);
58b4319ba4SBarry Smith     ierr = PetscMalloc(pcis->n*sizeof(int),&idx_B_local);CHKERRQ(ierr);
59b4319ba4SBarry Smith     for (i=0, pcis->n_B=0, n_I=0; i<pcis->n; i++) {
60b4319ba4SBarry Smith       if (array[i] == 1.0) { idx_I_local[n_I]       = i; n_I++;       }
61b4319ba4SBarry Smith       else                 { idx_B_local[pcis->n_B] = i; pcis->n_B++; }
62b4319ba4SBarry Smith     }
63b4319ba4SBarry Smith     /* Getting the global numbering */
64b4319ba4SBarry Smith     idx_B_global = idx_I_local + n_I; /* Just avoiding allocating extra memory, since we have vacant space */
65b4319ba4SBarry Smith     idx_I_global = idx_B_local + pcis->n_B;
66b4319ba4SBarry Smith     ierr = ISLocalToGlobalMappingApply(matis->mapping,pcis->n_B,idx_B_local,idx_B_global);CHKERRQ(ierr);
67b4319ba4SBarry Smith     ierr = ISLocalToGlobalMappingApply(matis->mapping,n_I,      idx_I_local,idx_I_global);CHKERRQ(ierr);
68b4319ba4SBarry Smith     /* Creating the index sets. */
69b4319ba4SBarry Smith     ierr = ISCreateGeneral(MPI_COMM_SELF,pcis->n_B,idx_B_local, &pcis->is_B_local);CHKERRQ(ierr);
70b4319ba4SBarry Smith     ierr = ISCreateGeneral(MPI_COMM_SELF,pcis->n_B,idx_B_global,&pcis->is_B_global);CHKERRQ(ierr);
71b4319ba4SBarry Smith     ierr = ISCreateGeneral(MPI_COMM_SELF,n_I      ,idx_I_local, &pcis->is_I_local);CHKERRQ(ierr);
72b4319ba4SBarry Smith     ierr = ISCreateGeneral(MPI_COMM_SELF,n_I      ,idx_I_global,&pcis->is_I_global);CHKERRQ(ierr);
73b4319ba4SBarry Smith     /* Freeing memory and restoring arrays */
74b4319ba4SBarry Smith     ierr = PetscFree(idx_B_local);CHKERRQ(ierr);
75b4319ba4SBarry Smith     ierr = PetscFree(idx_I_local);CHKERRQ(ierr);
76b4319ba4SBarry Smith     ierr = VecRestoreArray(pcis->vec1_N,&array);CHKERRQ(ierr);
77b4319ba4SBarry Smith   }
78b4319ba4SBarry Smith 
79b4319ba4SBarry Smith   /*
80b4319ba4SBarry Smith     Extracting the blocks A_II, A_BI, A_IB and A_BB from A. If the numbering
81b4319ba4SBarry Smith     is such that interior nodes come first than the interface ones, we have
82b4319ba4SBarry Smith 
83b4319ba4SBarry Smith     [           |      ]
84b4319ba4SBarry Smith     [    A_II   | A_IB ]
85b4319ba4SBarry Smith     A = [           |      ]
86b4319ba4SBarry Smith     [-----------+------]
87b4319ba4SBarry Smith     [    A_BI   | A_BB ]
88b4319ba4SBarry Smith   */
89b4319ba4SBarry Smith 
90b4319ba4SBarry Smith   ierr = MatGetSubMatrix(matis->A,pcis->is_I_local,pcis->is_I_local,PETSC_DECIDE,MAT_INITIAL_MATRIX,&pcis->A_II);CHKERRQ(ierr);
91b4319ba4SBarry Smith   ierr = MatGetSubMatrix(matis->A,pcis->is_I_local,pcis->is_B_local,PETSC_DECIDE,MAT_INITIAL_MATRIX,&pcis->A_IB);CHKERRQ(ierr);
92b4319ba4SBarry Smith   ierr = MatGetSubMatrix(matis->A,pcis->is_B_local,pcis->is_I_local,PETSC_DECIDE,MAT_INITIAL_MATRIX,&pcis->A_BI);CHKERRQ(ierr);
93b4319ba4SBarry Smith   ierr = MatGetSubMatrix(matis->A,pcis->is_B_local,pcis->is_B_local,PETSC_DECIDE,MAT_INITIAL_MATRIX,&pcis->A_BB);CHKERRQ(ierr);
94b4319ba4SBarry Smith 
95b4319ba4SBarry Smith   /*
96b4319ba4SBarry Smith     Creating work vectors and arrays
97b4319ba4SBarry Smith   */
98b4319ba4SBarry Smith   /* pcis->vec1_N has already been created */
99b4319ba4SBarry Smith   ierr = VecDuplicate(pcis->vec1_N,&pcis->vec2_N);CHKERRQ(ierr);
100b4319ba4SBarry Smith   ierr = VecCreateSeq(PETSC_COMM_SELF,pcis->n-pcis->n_B,&pcis->vec1_D);CHKERRQ(ierr);
101b4319ba4SBarry Smith   ierr = VecDuplicate(pcis->vec1_D,&pcis->vec2_D);CHKERRQ(ierr);
102b4319ba4SBarry Smith   ierr = VecDuplicate(pcis->vec1_D,&pcis->vec3_D);CHKERRQ(ierr);
103b4319ba4SBarry Smith   ierr = VecCreateSeq(PETSC_COMM_SELF,pcis->n_B,&pcis->vec1_B);CHKERRQ(ierr);
104b4319ba4SBarry Smith   ierr = VecDuplicate(pcis->vec1_B,&pcis->vec2_B);CHKERRQ(ierr);
105b4319ba4SBarry Smith   ierr = VecDuplicate(pcis->vec1_B,&pcis->vec3_B);CHKERRQ(ierr);
10623ce1328SBarry Smith   ierr = MatGetVecs(pc->pmat,&pcis->vec1_global,0);CHKERRQ(ierr);
107b4319ba4SBarry Smith   ierr = PetscMalloc((pcis->n)*sizeof(PetscScalar),&pcis->work_N);CHKERRQ(ierr);
108b4319ba4SBarry Smith 
109b4319ba4SBarry Smith   /* Creating the scatter contexts */
11023ce1328SBarry Smith   ierr = VecScatterCreate(pcis->vec1_global,pcis->is_I_global,pcis->vec1_D,(IS)0,&pcis->global_to_D);CHKERRQ(ierr);
111b4319ba4SBarry Smith   ierr = VecScatterCreate(pcis->vec1_N,pcis->is_B_local,pcis->vec1_B,(IS)0,&pcis->N_to_B);CHKERRQ(ierr);
11223ce1328SBarry Smith   ierr = VecScatterCreate(pcis->vec1_global,pcis->is_B_global,pcis->vec1_B,(IS)0,&pcis->global_to_B);CHKERRQ(ierr);
113b4319ba4SBarry Smith 
114b4319ba4SBarry Smith   /* Creating scaling "matrix" D, from information in vec1_N */
115b4319ba4SBarry Smith   ierr = VecDuplicate(pcis->vec1_B,&pcis->D);CHKERRQ(ierr);
116b4319ba4SBarry Smith   ierr = VecScatterBegin(pcis->vec1_N,pcis->D,INSERT_VALUES,SCATTER_FORWARD,pcis->N_to_B);CHKERRQ(ierr);
117b4319ba4SBarry Smith   ierr = VecScatterEnd  (pcis->vec1_N,pcis->D,INSERT_VALUES,SCATTER_FORWARD,pcis->N_to_B);CHKERRQ(ierr);
118b4319ba4SBarry Smith   ierr = VecReciprocal(pcis->D);CHKERRQ(ierr);
119b4319ba4SBarry Smith 
120b4319ba4SBarry Smith   /* See historical note 01, at the bottom of this file. */
121b4319ba4SBarry Smith 
122b4319ba4SBarry Smith   /*
123b4319ba4SBarry Smith     Creating the KSP contexts for the local Dirichlet and Neumann problems.
124b4319ba4SBarry Smith   */
125b4319ba4SBarry Smith   {
126b4319ba4SBarry Smith     PC  pc_ctx;
127b4319ba4SBarry Smith     /* Dirichlet */
128b4319ba4SBarry Smith     ierr = KSPCreate(PETSC_COMM_SELF,&pcis->ksp_D);CHKERRQ(ierr);
129b4319ba4SBarry Smith     ierr = KSPSetOperators(pcis->ksp_D,pcis->A_II,pcis->A_II,SAME_PRECONDITIONER);CHKERRQ(ierr);
130b4319ba4SBarry Smith     ierr = KSPSetOptionsPrefix(pcis->ksp_D,"is_localD_");CHKERRQ(ierr);
131b4319ba4SBarry Smith     ierr = KSPGetPC(pcis->ksp_D,&pc_ctx);CHKERRQ(ierr);
132b4319ba4SBarry Smith     ierr = PCSetType(pc_ctx,PCLU);CHKERRQ(ierr);
133b4319ba4SBarry Smith     ierr = KSPSetType(pcis->ksp_D,KSPPREONLY);CHKERRQ(ierr);
134b4319ba4SBarry Smith     ierr = KSPSetFromOptions(pcis->ksp_D);CHKERRQ(ierr);
135b4319ba4SBarry Smith     /* the vectors in the following line are dummy arguments, just telling the KSP the vector size. Values are not used */
136b4319ba4SBarry Smith     ierr = KSPSetUp(pcis->ksp_D);CHKERRQ(ierr);
137b4319ba4SBarry Smith     /* Neumann */
138b4319ba4SBarry Smith     ierr = KSPCreate(PETSC_COMM_SELF,&pcis->ksp_N);CHKERRQ(ierr);
139b4319ba4SBarry Smith     ierr = KSPSetOperators(pcis->ksp_N,matis->A,matis->A,SAME_PRECONDITIONER);CHKERRQ(ierr);
140b4319ba4SBarry Smith     ierr = KSPSetOptionsPrefix(pcis->ksp_N,"is_localN_");CHKERRQ(ierr);
141b4319ba4SBarry Smith     ierr = KSPGetPC(pcis->ksp_N,&pc_ctx);CHKERRQ(ierr);
142b4319ba4SBarry Smith     ierr = PCSetType(pc_ctx,PCLU);CHKERRQ(ierr);
143b4319ba4SBarry Smith     ierr = KSPSetType(pcis->ksp_N,KSPPREONLY);CHKERRQ(ierr);
144b4319ba4SBarry Smith     ierr = KSPSetFromOptions(pcis->ksp_N);CHKERRQ(ierr);
145b4319ba4SBarry Smith     {
146b4319ba4SBarry Smith       PetscTruth damp_fixed,
147b4319ba4SBarry Smith                  remove_nullspace_fixed,
148b4319ba4SBarry Smith                  set_damping_factor_floating,
149b4319ba4SBarry Smith                  not_damp_floating,
150b4319ba4SBarry Smith                  not_remove_nullspace_floating;
151b4319ba4SBarry Smith       PetscReal  fixed_factor,
152b4319ba4SBarry Smith                  floating_factor;
153b4319ba4SBarry Smith 
154b4319ba4SBarry Smith       ierr = PetscOptionsGetReal(pc_ctx->prefix,"-pc_is_damp_fixed",&fixed_factor,&damp_fixed);CHKERRQ(ierr);
155b4319ba4SBarry Smith       if (!damp_fixed) { fixed_factor = 0.0; }
156b4319ba4SBarry Smith       ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_damp_fixed",&damp_fixed);CHKERRQ(ierr);
157b4319ba4SBarry Smith 
158b4319ba4SBarry Smith       ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_remove_nullspace_fixed",&remove_nullspace_fixed);CHKERRQ(ierr);
159b4319ba4SBarry Smith 
160b4319ba4SBarry Smith       ierr = PetscOptionsGetReal(pc_ctx->prefix,"-pc_is_set_damping_factor_floating",
161b4319ba4SBarry Smith 			      &floating_factor,&set_damping_factor_floating);CHKERRQ(ierr);
162b4319ba4SBarry Smith       if (!set_damping_factor_floating) { floating_factor = 0.0; }
163b4319ba4SBarry Smith       ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_set_damping_factor_floating",&set_damping_factor_floating);CHKERRQ(ierr);
164b4319ba4SBarry Smith       if (!set_damping_factor_floating) { floating_factor = 1.e-12; }
165b4319ba4SBarry Smith 
166b4319ba4SBarry Smith       ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_not_damp_floating",&not_damp_floating);CHKERRQ(ierr);
167b4319ba4SBarry Smith 
168b4319ba4SBarry Smith       ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_not_remove_nullspace_floating",&not_remove_nullspace_floating);CHKERRQ(ierr);
169b4319ba4SBarry Smith 
170b4319ba4SBarry Smith       if (pcis->pure_neumann) {  /* floating subdomain */
171b4319ba4SBarry Smith 	if (!(not_damp_floating)) {
172b4319ba4SBarry Smith 	  ierr = PCLUSetDamping (pc_ctx,floating_factor);CHKERRQ(ierr);
173b4319ba4SBarry Smith 	  ierr = PCILUSetDamping(pc_ctx,floating_factor);CHKERRQ(ierr);
174b4319ba4SBarry Smith 	}
175b4319ba4SBarry Smith 	if (!(not_remove_nullspace_floating)){
176b4319ba4SBarry Smith 	  MatNullSpace nullsp;
177b4319ba4SBarry Smith 	  ierr = MatNullSpaceCreate(PETSC_COMM_SELF,1,0,PETSC_NULL,&nullsp);CHKERRQ(ierr);
178d8fd42c4SBarry Smith 	  ierr = KSPSetNullSpace(pcis->ksp_N,nullsp);CHKERRQ(ierr);
179b4319ba4SBarry Smith 	  ierr = MatNullSpaceDestroy(nullsp);CHKERRQ(ierr);
180b4319ba4SBarry Smith 	}
181b4319ba4SBarry Smith       } else {  /* fixed subdomain */
182b4319ba4SBarry Smith 	if (damp_fixed) {
183b4319ba4SBarry Smith 	  ierr = PCLUSetDamping (pc_ctx,fixed_factor);CHKERRQ(ierr);
184b4319ba4SBarry Smith 	  ierr = PCILUSetDamping(pc_ctx,fixed_factor);CHKERRQ(ierr);
185b4319ba4SBarry Smith 	}
186b4319ba4SBarry Smith 	if (remove_nullspace_fixed) {
187b4319ba4SBarry Smith 	  MatNullSpace nullsp;
188b4319ba4SBarry Smith 	  ierr = MatNullSpaceCreate(PETSC_COMM_SELF,1,0,PETSC_NULL,&nullsp);CHKERRQ(ierr);
189d8fd42c4SBarry Smith 	  ierr = KSPSetNullSpace(pcis->ksp_N,nullsp);CHKERRQ(ierr);
190b4319ba4SBarry Smith 	  ierr = MatNullSpaceDestroy(nullsp);CHKERRQ(ierr);
191b4319ba4SBarry Smith 	}
192b4319ba4SBarry Smith       }
193b4319ba4SBarry Smith     }
194b4319ba4SBarry Smith     /* the vectors in the following line are dummy arguments, just telling the KSP the vector size. Values are not used */
195b4319ba4SBarry Smith     ierr = KSPSetUp(pcis->ksp_N);CHKERRQ(ierr);
196b4319ba4SBarry Smith   }
197b4319ba4SBarry Smith 
198b4319ba4SBarry Smith   ierr = ISLocalToGlobalMappingGetInfo(((Mat_IS*)(pc->mat->data))->mapping,&(pcis->n_neigh),&(pcis->neigh),
199b4319ba4SBarry Smith                                        &(pcis->n_shared),&(pcis->shared));CHKERRQ(ierr);
200b4319ba4SBarry Smith   pcis->ISLocalToGlobalMappingGetInfoWasCalled = PETSC_TRUE;
201b4319ba4SBarry Smith 
202b4319ba4SBarry Smith   PetscFunctionReturn(0);
203b4319ba4SBarry Smith }
204b4319ba4SBarry Smith 
205b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */
206b4319ba4SBarry Smith /*
207b4319ba4SBarry Smith    PCISDestroy -
208b4319ba4SBarry Smith */
209b4319ba4SBarry Smith #undef __FUNCT__
210b4319ba4SBarry Smith #define __FUNCT__ "PCISDestroy"
211dfbe8321SBarry Smith PetscErrorCode PCISDestroy(PC pc)
212b4319ba4SBarry Smith {
213b4319ba4SBarry Smith   PC_IS *pcis = (PC_IS*)(pc->data);
214dfbe8321SBarry Smith   PetscErrorCode ierr;
215b4319ba4SBarry Smith 
216b4319ba4SBarry Smith   PetscFunctionBegin;
217b4319ba4SBarry Smith 
218b4319ba4SBarry Smith   if (pcis->is_B_local)  {ierr = ISDestroy(pcis->is_B_local);CHKERRQ(ierr);}
219b4319ba4SBarry Smith   if (pcis->is_I_local)  {ierr = ISDestroy(pcis->is_I_local);CHKERRQ(ierr);}
220b4319ba4SBarry Smith   if (pcis->is_B_global) {ierr = ISDestroy(pcis->is_B_global);CHKERRQ(ierr);}
221b4319ba4SBarry Smith   if (pcis->is_I_global) {ierr = ISDestroy(pcis->is_I_global);CHKERRQ(ierr);}
222b4319ba4SBarry Smith   if (pcis->A_II)        {ierr = MatDestroy(pcis->A_II);CHKERRQ(ierr);}
223b4319ba4SBarry Smith   if (pcis->A_IB)        {ierr = MatDestroy(pcis->A_IB);CHKERRQ(ierr);}
224b4319ba4SBarry Smith   if (pcis->A_BI)        {ierr = MatDestroy(pcis->A_BI);CHKERRQ(ierr);}
225b4319ba4SBarry Smith   if (pcis->A_BB)        {ierr = MatDestroy(pcis->A_BB);CHKERRQ(ierr);}
226b4319ba4SBarry Smith   if (pcis->D)           {ierr = VecDestroy(pcis->D);CHKERRQ(ierr);}
227b4319ba4SBarry Smith   if (pcis->ksp_N)      {ierr = KSPDestroy(pcis->ksp_N);CHKERRQ(ierr);}
228b4319ba4SBarry Smith   if (pcis->ksp_D)      {ierr = KSPDestroy(pcis->ksp_D);CHKERRQ(ierr);}
229b4319ba4SBarry Smith   if (pcis->vec1_N)      {ierr = VecDestroy(pcis->vec1_N);CHKERRQ(ierr);}
230b4319ba4SBarry Smith   if (pcis->vec2_N)      {ierr = VecDestroy(pcis->vec2_N);CHKERRQ(ierr);}
231b4319ba4SBarry Smith   if (pcis->vec1_D)      {ierr = VecDestroy(pcis->vec1_D);CHKERRQ(ierr);}
232b4319ba4SBarry Smith   if (pcis->vec2_D)      {ierr = VecDestroy(pcis->vec2_D);CHKERRQ(ierr);}
233b4319ba4SBarry Smith   if (pcis->vec3_D)      {ierr = VecDestroy(pcis->vec3_D);CHKERRQ(ierr);}
234b4319ba4SBarry Smith   if (pcis->vec1_B)      {ierr = VecDestroy(pcis->vec1_B);CHKERRQ(ierr);}
235b4319ba4SBarry Smith   if (pcis->vec2_B)      {ierr = VecDestroy(pcis->vec2_B);CHKERRQ(ierr);}
236b4319ba4SBarry Smith   if (pcis->vec3_B)      {ierr = VecDestroy(pcis->vec3_B);CHKERRQ(ierr);}
237b4319ba4SBarry Smith   if (pcis->vec1_global) {ierr = VecDestroy(pcis->vec1_global);CHKERRQ(ierr);}
238b4319ba4SBarry Smith   if (pcis->work_N)      {ierr = PetscFree(pcis->work_N);CHKERRQ(ierr);}
239b4319ba4SBarry Smith   if (pcis->global_to_D) {ierr = VecScatterDestroy(pcis->global_to_D);CHKERRQ(ierr);}
240b4319ba4SBarry Smith   if (pcis->N_to_B)      {ierr = VecScatterDestroy(pcis->N_to_B);CHKERRQ(ierr);}
241b4319ba4SBarry Smith   if (pcis->global_to_B) {ierr = VecScatterDestroy(pcis->global_to_B);CHKERRQ(ierr);}
242b4319ba4SBarry Smith   if (pcis->ISLocalToGlobalMappingGetInfoWasCalled) {
243b4319ba4SBarry Smith     ierr = ISLocalToGlobalMappingRestoreInfo((ISLocalToGlobalMapping)0,&(pcis->n_neigh),&(pcis->neigh),&(pcis->n_shared),&(pcis->shared));CHKERRQ(ierr);
244b4319ba4SBarry Smith   }
245b4319ba4SBarry Smith 
246b4319ba4SBarry Smith   PetscFunctionReturn(0);
247b4319ba4SBarry Smith }
248b4319ba4SBarry Smith 
249b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */
250b4319ba4SBarry Smith /*
251b4319ba4SBarry Smith    PCISCreate -
252b4319ba4SBarry Smith */
253b4319ba4SBarry Smith #undef __FUNCT__
254b4319ba4SBarry Smith #define __FUNCT__ "PCISCreate"
255*6849ba73SBarry Smith PetscErrorCode PCISCreate(PC pc)
256b4319ba4SBarry Smith {
257b4319ba4SBarry Smith   PC_IS *pcis = (PC_IS*)(pc->data);
258b4319ba4SBarry Smith 
259b4319ba4SBarry Smith   PetscFunctionBegin;
260b4319ba4SBarry Smith 
261b4319ba4SBarry Smith   pcis->is_B_local  = 0;
262b4319ba4SBarry Smith   pcis->is_I_local  = 0;
263b4319ba4SBarry Smith   pcis->is_B_global = 0;
264b4319ba4SBarry Smith   pcis->is_I_global = 0;
265b4319ba4SBarry Smith   pcis->A_II        = 0;
266b4319ba4SBarry Smith   pcis->A_IB        = 0;
267b4319ba4SBarry Smith   pcis->A_BI        = 0;
268b4319ba4SBarry Smith   pcis->A_BB        = 0;
269b4319ba4SBarry Smith   pcis->D           = 0;
270b4319ba4SBarry Smith   pcis->ksp_N      = 0;
271b4319ba4SBarry Smith   pcis->ksp_D      = 0;
272b4319ba4SBarry Smith   pcis->vec1_N      = 0;
273b4319ba4SBarry Smith   pcis->vec2_N      = 0;
274b4319ba4SBarry Smith   pcis->vec1_D      = 0;
275b4319ba4SBarry Smith   pcis->vec2_D      = 0;
276b4319ba4SBarry Smith   pcis->vec3_D      = 0;
277b4319ba4SBarry Smith   pcis->vec1_B      = 0;
278b4319ba4SBarry Smith   pcis->vec2_B      = 0;
279b4319ba4SBarry Smith   pcis->vec3_B      = 0;
280b4319ba4SBarry Smith   pcis->vec1_global = 0;
281b4319ba4SBarry Smith   pcis->work_N      = 0;
282b4319ba4SBarry Smith   pcis->global_to_D = 0;
283b4319ba4SBarry Smith   pcis->N_to_B      = 0;
284b4319ba4SBarry Smith   pcis->global_to_B = 0;
285b4319ba4SBarry Smith   pcis->ISLocalToGlobalMappingGetInfoWasCalled = PETSC_FALSE;
286b4319ba4SBarry Smith 
287b4319ba4SBarry Smith   PetscFunctionReturn(0);
288b4319ba4SBarry Smith }
289b4319ba4SBarry Smith 
290b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */
291b4319ba4SBarry Smith /*
292b4319ba4SBarry Smith    PCISApplySchur -
293b4319ba4SBarry Smith 
294b4319ba4SBarry Smith    Input parameters:
295b4319ba4SBarry Smith .  pc - preconditioner context
296b4319ba4SBarry Smith .  v - vector to which the Schur complement is to be applied (it is NOT modified inside this function, UNLESS vec2_B is null)
297b4319ba4SBarry Smith 
298b4319ba4SBarry Smith    Output parameters:
299b4319ba4SBarry Smith .  vec1_B - result of Schur complement applied to chunk
300b4319ba4SBarry Smith .  vec2_B - garbage (used as work space), or null (and v is used as workspace)
301b4319ba4SBarry Smith .  vec1_D - garbage (used as work space)
302b4319ba4SBarry Smith .  vec2_D - garbage (used as work space)
303b4319ba4SBarry Smith 
304b4319ba4SBarry Smith */
305b4319ba4SBarry Smith #undef __FUNCT__
306b4319ba4SBarry Smith #define __FUNCT__ "PCIterSuApplySchur"
307*6849ba73SBarry Smith PetscErrorCode PCISApplySchur(PC pc, Vec v, Vec vec1_B, Vec vec2_B, Vec vec1_D, Vec vec2_D)
308b4319ba4SBarry Smith {
309dfbe8321SBarry Smith   PetscErrorCode ierr;
310b4319ba4SBarry Smith   PetscScalar m_one = -1.0;
311b4319ba4SBarry Smith   PC_IS       *pcis = (PC_IS*)(pc->data);
312b4319ba4SBarry Smith 
313b4319ba4SBarry Smith   PetscFunctionBegin;
314b4319ba4SBarry Smith 
315b4319ba4SBarry Smith   if (vec2_B == (Vec)0) { vec2_B = v; }
316b4319ba4SBarry Smith 
317b4319ba4SBarry Smith   ierr = MatMult(pcis->A_BB,v,vec1_B);CHKERRQ(ierr);
318b4319ba4SBarry Smith   ierr = MatMult(pcis->A_IB,v,vec1_D);CHKERRQ(ierr);
31923ce1328SBarry Smith   ierr = KSPSolve(pcis->ksp_D,vec1_D,vec2_D);CHKERRQ(ierr);
320b4319ba4SBarry Smith   ierr = MatMult(pcis->A_BI,vec2_D,vec2_B);CHKERRQ(ierr);
321b4319ba4SBarry Smith   ierr = VecAXPY(&m_one,vec2_B,vec1_B);CHKERRQ(ierr);
322b4319ba4SBarry Smith 
323b4319ba4SBarry Smith   PetscFunctionReturn(0);
324b4319ba4SBarry Smith }
325b4319ba4SBarry Smith 
326b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */
327b4319ba4SBarry Smith /*
328b4319ba4SBarry Smith    PCISScatterArrayNToVecB - Scatters interface node values from a big array (of all local nodes, interior or interface,
329b4319ba4SBarry Smith    including ghosts) into an interface vector, when in SCATTER_FORWARD mode, or vice-versa, when in SCATTER_REVERSE
330b4319ba4SBarry Smith    mode.
331b4319ba4SBarry Smith 
332b4319ba4SBarry Smith    Input parameters:
333b4319ba4SBarry Smith .  pc - preconditioner context
334b4319ba4SBarry Smith .  array_N - [when in SCATTER_FORWARD mode] Array to be scattered into the vector
335b4319ba4SBarry Smith .  v_B - [when in SCATTER_REVERSE mode] Vector to be scattered into the array
336b4319ba4SBarry Smith 
337b4319ba4SBarry Smith    Output parameter:
338b4319ba4SBarry Smith .  array_N - [when in SCATTER_REVERSE mode] Array to receive the scattered vector
339b4319ba4SBarry Smith .  v_B - [when in SCATTER_FORWARD mode] Vector to receive the scattered array
340b4319ba4SBarry Smith 
341b4319ba4SBarry Smith    Notes:
342b4319ba4SBarry Smith    The entries in the array that do not correspond to interface nodes remain unaltered.
343b4319ba4SBarry Smith */
344b4319ba4SBarry Smith #undef __FUNCT__
345b4319ba4SBarry Smith #define __FUNCT__ "PCISScatterArrayNToVecB"
346*6849ba73SBarry Smith PetscErrorCode PCISScatterArrayNToVecB (PetscScalar *array_N, Vec v_B, InsertMode imode, ScatterMode smode, PC pc)
347b4319ba4SBarry Smith {
348*6849ba73SBarry Smith   int         i, *idex;
349*6849ba73SBarry Smith   PetscErrorCode ierr;
350b4319ba4SBarry Smith   PetscScalar *array_B;
351b4319ba4SBarry Smith   PC_IS       *pcis = (PC_IS*)(pc->data);
352b4319ba4SBarry Smith 
353b4319ba4SBarry Smith   PetscFunctionBegin;
354b4319ba4SBarry Smith 
355b4319ba4SBarry Smith   ierr = VecGetArray(v_B,&array_B);CHKERRQ(ierr);
356b4319ba4SBarry Smith   ierr = ISGetIndices(pcis->is_B_local,&idex);CHKERRQ(ierr);
357b4319ba4SBarry Smith 
358b4319ba4SBarry Smith   if (smode == SCATTER_FORWARD) {
359b4319ba4SBarry Smith     if (imode == INSERT_VALUES) {
360b4319ba4SBarry Smith       for (i=0; i<pcis->n_B; i++) { array_B[i]  = array_N[idex[i]]; }
361b4319ba4SBarry Smith     } else {  /* ADD_VALUES */
362b4319ba4SBarry Smith       for (i=0; i<pcis->n_B; i++) { array_B[i] += array_N[idex[i]]; }
363b4319ba4SBarry Smith     }
364b4319ba4SBarry Smith   } else {  /* SCATTER_REVERSE */
365b4319ba4SBarry Smith     if (imode == INSERT_VALUES) {
366b4319ba4SBarry Smith       for (i=0; i<pcis->n_B; i++) { array_N[idex[i]]  = array_B[i]; }
367b4319ba4SBarry Smith     } else {  /* ADD_VALUES */
368b4319ba4SBarry Smith       for (i=0; i<pcis->n_B; i++) { array_N[idex[i]] += array_B[i]; }
369b4319ba4SBarry Smith     }
370b4319ba4SBarry Smith   }
371b4319ba4SBarry Smith 
372b4319ba4SBarry Smith   ierr = ISRestoreIndices(pcis->is_B_local,&idex);CHKERRQ(ierr);
373b4319ba4SBarry Smith   ierr = VecRestoreArray(v_B,&array_B);CHKERRQ(ierr);
374b4319ba4SBarry Smith 
375b4319ba4SBarry Smith   PetscFunctionReturn(0);
376b4319ba4SBarry Smith }
377b4319ba4SBarry Smith 
378b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */
379b4319ba4SBarry Smith /*
380b4319ba4SBarry Smith    PCISApplyInvSchur - Solves the Neumann problem related to applying the inverse of the Schur complement.
381b4319ba4SBarry Smith    More precisely, solves the problem:
382b4319ba4SBarry Smith                                         [ A_II  A_IB ] [ . ]   [ 0 ]
383b4319ba4SBarry Smith                                         [            ] [   ] = [   ]
384b4319ba4SBarry Smith                                         [ A_BI  A_BB ] [ x ]   [ b ]
385b4319ba4SBarry Smith 
386b4319ba4SBarry Smith    Input parameters:
387b4319ba4SBarry Smith .  pc - preconditioner context
388b4319ba4SBarry Smith .  b - vector of local interface nodes (including ghosts)
389b4319ba4SBarry Smith 
390b4319ba4SBarry Smith    Output parameters:
391b4319ba4SBarry Smith .  x - vector of local interface nodes (including ghosts); returns the application of the inverse of the Schur
392b4319ba4SBarry Smith        complement to b
393b4319ba4SBarry Smith .  vec1_N - vector of local nodes (interior and interface, including ghosts); returns garbage (used as work space)
394b4319ba4SBarry Smith .  vec2_N - vector of local nodes (interior and interface, including ghosts); returns garbage (used as work space)
395b4319ba4SBarry Smith 
396b4319ba4SBarry Smith */
397b4319ba4SBarry Smith #undef __FUNCT__
398b4319ba4SBarry Smith #define __FUNCT__ "PCISApplyInvSchur"
399*6849ba73SBarry Smith PetscErrorCode PCISApplyInvSchur (PC pc, Vec b, Vec x, Vec vec1_N, Vec vec2_N)
400b4319ba4SBarry Smith {
401dfbe8321SBarry Smith   PetscErrorCode ierr;
402b4319ba4SBarry Smith   PC_IS       *pcis = (PC_IS*)(pc->data);
403b4319ba4SBarry Smith   PetscScalar zero  = 0.0;
404b4319ba4SBarry Smith 
405b4319ba4SBarry Smith   PetscFunctionBegin;
406b4319ba4SBarry Smith 
407b4319ba4SBarry Smith   /*
408b4319ba4SBarry Smith     Neumann solvers.
409b4319ba4SBarry Smith     Applying the inverse of the local Schur complement, i.e, solving a Neumann
410b4319ba4SBarry Smith     Problem with zero at the interior nodes of the RHS and extracting the interface
411b4319ba4SBarry Smith     part of the solution. inverse Schur complement is applied to b and the result
412b4319ba4SBarry Smith     is stored in x.
413b4319ba4SBarry Smith   */
414b4319ba4SBarry Smith   /* Setting the RHS vec1_N */
415b4319ba4SBarry Smith   ierr = VecSet(&zero,vec1_N);CHKERRQ(ierr);
416b4319ba4SBarry Smith   ierr = VecScatterBegin(b,vec1_N,INSERT_VALUES,SCATTER_REVERSE,pcis->N_to_B);CHKERRQ(ierr);
417b4319ba4SBarry Smith   ierr = VecScatterEnd  (b,vec1_N,INSERT_VALUES,SCATTER_REVERSE,pcis->N_to_B);CHKERRQ(ierr);
418b4319ba4SBarry Smith   /* Checking for consistency of the RHS */
419b4319ba4SBarry Smith   {
420b4319ba4SBarry Smith     PetscTruth flg;
421b4319ba4SBarry Smith     ierr = PetscOptionsHasName(PETSC_NULL,"-pc_is_check_consistency",&flg);CHKERRQ(ierr);
422b4319ba4SBarry Smith     if (flg) {
423b4319ba4SBarry Smith       PetscScalar average;
424b4319ba4SBarry Smith       ierr = VecSum(vec1_N,&average);CHKERRQ(ierr);
425b4319ba4SBarry Smith       average = average / ((PetscReal)pcis->n);
426b4319ba4SBarry Smith       if (pcis->pure_neumann) {
427b4319ba4SBarry Smith         ierr = PetscViewerASCIISynchronizedPrintf(PETSC_VIEWER_STDOUT_(pc->comm),"Subdomain %04d is floating. Average = % 1.14e\n",
428b4319ba4SBarry Smith                                              PetscGlobalRank,PetscAbsScalar(average));CHKERRQ(ierr);
429b4319ba4SBarry Smith       } else {
430b4319ba4SBarry Smith         ierr = PetscViewerASCIISynchronizedPrintf(PETSC_VIEWER_STDOUT_(pc->comm),"Subdomain %04d is fixed.    Average = % 1.14e\n",
431b4319ba4SBarry Smith                                              PetscGlobalRank,PetscAbsScalar(average));CHKERRQ(ierr);
432b4319ba4SBarry Smith       }
433b4319ba4SBarry Smith       PetscViewerFlush(PETSC_VIEWER_STDOUT_(pc->comm));
434b4319ba4SBarry Smith     }
435b4319ba4SBarry Smith   }
436b4319ba4SBarry Smith   /* Solving the system for vec2_N */
43723ce1328SBarry Smith   ierr = KSPSolve(pcis->ksp_N,vec1_N,vec2_N);CHKERRQ(ierr);
438b4319ba4SBarry Smith   /* Extracting the local interface vector out of the solution */
439b4319ba4SBarry Smith   ierr = VecScatterBegin(vec2_N,x,INSERT_VALUES,SCATTER_FORWARD,pcis->N_to_B);CHKERRQ(ierr);
440b4319ba4SBarry Smith   ierr = VecScatterEnd  (vec2_N,x,INSERT_VALUES,SCATTER_FORWARD,pcis->N_to_B);CHKERRQ(ierr);
441b4319ba4SBarry Smith 
442b4319ba4SBarry Smith   PetscFunctionReturn(0);
443b4319ba4SBarry Smith }
444b4319ba4SBarry Smith 
445b4319ba4SBarry Smith 
446b4319ba4SBarry Smith 
447b4319ba4SBarry Smith 
448b4319ba4SBarry Smith 
449b4319ba4SBarry Smith 
450b4319ba4SBarry Smith 
451b4319ba4SBarry Smith 
452b4319ba4SBarry Smith 
453