1*dba47a55SKris Buschelman #define PETSCKSP_DLL 223ce1328SBarry Smith 3b4319ba4SBarry Smith #include "src/ksp/pc/impls/is/pcis.h" 4b4319ba4SBarry Smith 5b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */ 6b4319ba4SBarry Smith /* 7b4319ba4SBarry Smith PCISSetUp - 8b4319ba4SBarry Smith */ 9b4319ba4SBarry Smith #undef __FUNCT__ 10b4319ba4SBarry Smith #define __FUNCT__ "PCISSetUp" 11*dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCISSetUp(PC pc) 12b4319ba4SBarry Smith { 13b4319ba4SBarry Smith PC_IS *pcis = (PC_IS*)(pc->data); 14b4319ba4SBarry Smith Mat_IS *matis = (Mat_IS*)pc->mat->data; 1513f74950SBarry Smith PetscInt i; 166849ba73SBarry Smith PetscErrorCode ierr; 17b4319ba4SBarry Smith PetscTruth flg; 18b4319ba4SBarry Smith 19b4319ba4SBarry Smith PetscFunctionBegin; 20b4319ba4SBarry Smith ierr = PetscTypeCompare((PetscObject)pc->mat,MATIS,&flg);CHKERRQ(ierr); 21b4319ba4SBarry Smith if (!flg){ 221302d50aSBarry Smith SETERRQ(PETSC_ERR_ARG_WRONG,"Preconditioner type of Neumann Neumman requires matrix of type MATIS"); 23b4319ba4SBarry Smith } 24b4319ba4SBarry Smith 25b4319ba4SBarry Smith pcis->pure_neumann = matis->pure_neumann; 26b4319ba4SBarry Smith 27b4319ba4SBarry Smith /* 28b4319ba4SBarry Smith Creating the local vector vec1_N, containing the inverse of the number 29b4319ba4SBarry Smith of subdomains to which each local node (either owned or ghost) 30b4319ba4SBarry Smith pertains. To accomplish that, we scatter local vectors of 1's to 31b4319ba4SBarry Smith a global vector (adding the values); scatter the result back to 32b4319ba4SBarry Smith local vectors and finally invert the result. 33b4319ba4SBarry Smith */ 34b4319ba4SBarry Smith { 35b4319ba4SBarry Smith Vec counter; 36b4319ba4SBarry Smith PetscScalar one=1.0, zero=0.0; 37b4319ba4SBarry Smith ierr = VecDuplicate(matis->x,&pcis->vec1_N);CHKERRQ(ierr); 3823ce1328SBarry Smith ierr = MatGetVecs(pc->pmat,&counter,0);CHKERRQ(ierr); /* temporary auxiliar vector */ 39b4319ba4SBarry Smith ierr = VecSet(&zero,counter);CHKERRQ(ierr); 40b4319ba4SBarry Smith ierr = VecSet(&one,pcis->vec1_N);CHKERRQ(ierr); 41b4319ba4SBarry Smith ierr = VecScatterBegin(pcis->vec1_N,counter,ADD_VALUES,SCATTER_REVERSE,matis->ctx);CHKERRQ(ierr); 42b4319ba4SBarry Smith ierr = VecScatterEnd (pcis->vec1_N,counter,ADD_VALUES,SCATTER_REVERSE,matis->ctx);CHKERRQ(ierr); 43b4319ba4SBarry Smith ierr = VecScatterBegin(counter,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD,matis->ctx);CHKERRQ(ierr); 44b4319ba4SBarry Smith ierr = VecScatterEnd (counter,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD,matis->ctx);CHKERRQ(ierr); 45b4319ba4SBarry Smith ierr = VecDestroy(counter);CHKERRQ(ierr); 46b4319ba4SBarry Smith } 47b4319ba4SBarry Smith /* 48b4319ba4SBarry Smith Creating local and global index sets for interior and 49b4319ba4SBarry Smith inteface nodes. Notice that interior nodes have D[i]==1.0. 50b4319ba4SBarry Smith */ 51b4319ba4SBarry Smith { 5213f74950SBarry Smith PetscInt n_I; 5313f74950SBarry Smith PetscInt *idx_I_local,*idx_B_local,*idx_I_global,*idx_B_global; 54b4319ba4SBarry Smith PetscScalar *array; 55b4319ba4SBarry Smith /* Identifying interior and interface nodes, in local numbering */ 56b4319ba4SBarry Smith ierr = VecGetSize(pcis->vec1_N,&pcis->n);CHKERRQ(ierr); 57b4319ba4SBarry Smith ierr = VecGetArray(pcis->vec1_N,&array);CHKERRQ(ierr); 5813f74950SBarry Smith ierr = PetscMalloc(pcis->n*sizeof(PetscInt),&idx_I_local);CHKERRQ(ierr); 5913f74950SBarry Smith ierr = PetscMalloc(pcis->n*sizeof(PetscInt),&idx_B_local);CHKERRQ(ierr); 60b4319ba4SBarry Smith for (i=0, pcis->n_B=0, n_I=0; i<pcis->n; i++) { 61b4319ba4SBarry Smith if (array[i] == 1.0) { idx_I_local[n_I] = i; n_I++; } 62b4319ba4SBarry Smith else { idx_B_local[pcis->n_B] = i; pcis->n_B++; } 63b4319ba4SBarry Smith } 64b4319ba4SBarry Smith /* Getting the global numbering */ 65b4319ba4SBarry Smith idx_B_global = idx_I_local + n_I; /* Just avoiding allocating extra memory, since we have vacant space */ 66b4319ba4SBarry Smith idx_I_global = idx_B_local + pcis->n_B; 67b4319ba4SBarry Smith ierr = ISLocalToGlobalMappingApply(matis->mapping,pcis->n_B,idx_B_local,idx_B_global);CHKERRQ(ierr); 68b4319ba4SBarry Smith ierr = ISLocalToGlobalMappingApply(matis->mapping,n_I, idx_I_local,idx_I_global);CHKERRQ(ierr); 69b4319ba4SBarry Smith /* Creating the index sets. */ 70b4319ba4SBarry Smith ierr = ISCreateGeneral(MPI_COMM_SELF,pcis->n_B,idx_B_local, &pcis->is_B_local);CHKERRQ(ierr); 71b4319ba4SBarry Smith ierr = ISCreateGeneral(MPI_COMM_SELF,pcis->n_B,idx_B_global,&pcis->is_B_global);CHKERRQ(ierr); 72b4319ba4SBarry Smith ierr = ISCreateGeneral(MPI_COMM_SELF,n_I ,idx_I_local, &pcis->is_I_local);CHKERRQ(ierr); 73b4319ba4SBarry Smith ierr = ISCreateGeneral(MPI_COMM_SELF,n_I ,idx_I_global,&pcis->is_I_global);CHKERRQ(ierr); 74b4319ba4SBarry Smith /* Freeing memory and restoring arrays */ 75b4319ba4SBarry Smith ierr = PetscFree(idx_B_local);CHKERRQ(ierr); 76b4319ba4SBarry Smith ierr = PetscFree(idx_I_local);CHKERRQ(ierr); 77b4319ba4SBarry Smith ierr = VecRestoreArray(pcis->vec1_N,&array);CHKERRQ(ierr); 78b4319ba4SBarry Smith } 79b4319ba4SBarry Smith 80b4319ba4SBarry Smith /* 81b4319ba4SBarry Smith Extracting the blocks A_II, A_BI, A_IB and A_BB from A. If the numbering 82b4319ba4SBarry Smith is such that interior nodes come first than the interface ones, we have 83b4319ba4SBarry Smith 84b4319ba4SBarry Smith [ | ] 85b4319ba4SBarry Smith [ A_II | A_IB ] 86b4319ba4SBarry Smith A = [ | ] 87b4319ba4SBarry Smith [-----------+------] 88b4319ba4SBarry Smith [ A_BI | A_BB ] 89b4319ba4SBarry Smith */ 90b4319ba4SBarry Smith 91b4319ba4SBarry Smith ierr = MatGetSubMatrix(matis->A,pcis->is_I_local,pcis->is_I_local,PETSC_DECIDE,MAT_INITIAL_MATRIX,&pcis->A_II);CHKERRQ(ierr); 92b4319ba4SBarry Smith ierr = MatGetSubMatrix(matis->A,pcis->is_I_local,pcis->is_B_local,PETSC_DECIDE,MAT_INITIAL_MATRIX,&pcis->A_IB);CHKERRQ(ierr); 93b4319ba4SBarry Smith ierr = MatGetSubMatrix(matis->A,pcis->is_B_local,pcis->is_I_local,PETSC_DECIDE,MAT_INITIAL_MATRIX,&pcis->A_BI);CHKERRQ(ierr); 94b4319ba4SBarry Smith ierr = MatGetSubMatrix(matis->A,pcis->is_B_local,pcis->is_B_local,PETSC_DECIDE,MAT_INITIAL_MATRIX,&pcis->A_BB);CHKERRQ(ierr); 95b4319ba4SBarry Smith 96b4319ba4SBarry Smith /* 97b4319ba4SBarry Smith Creating work vectors and arrays 98b4319ba4SBarry Smith */ 99b4319ba4SBarry Smith /* pcis->vec1_N has already been created */ 100b4319ba4SBarry Smith ierr = VecDuplicate(pcis->vec1_N,&pcis->vec2_N);CHKERRQ(ierr); 101b4319ba4SBarry Smith ierr = VecCreateSeq(PETSC_COMM_SELF,pcis->n-pcis->n_B,&pcis->vec1_D);CHKERRQ(ierr); 102b4319ba4SBarry Smith ierr = VecDuplicate(pcis->vec1_D,&pcis->vec2_D);CHKERRQ(ierr); 103b4319ba4SBarry Smith ierr = VecDuplicate(pcis->vec1_D,&pcis->vec3_D);CHKERRQ(ierr); 104b4319ba4SBarry Smith ierr = VecCreateSeq(PETSC_COMM_SELF,pcis->n_B,&pcis->vec1_B);CHKERRQ(ierr); 105b4319ba4SBarry Smith ierr = VecDuplicate(pcis->vec1_B,&pcis->vec2_B);CHKERRQ(ierr); 106b4319ba4SBarry Smith ierr = VecDuplicate(pcis->vec1_B,&pcis->vec3_B);CHKERRQ(ierr); 10723ce1328SBarry Smith ierr = MatGetVecs(pc->pmat,&pcis->vec1_global,0);CHKERRQ(ierr); 108b4319ba4SBarry Smith ierr = PetscMalloc((pcis->n)*sizeof(PetscScalar),&pcis->work_N);CHKERRQ(ierr); 109b4319ba4SBarry Smith 110b4319ba4SBarry Smith /* Creating the scatter contexts */ 11123ce1328SBarry Smith ierr = VecScatterCreate(pcis->vec1_global,pcis->is_I_global,pcis->vec1_D,(IS)0,&pcis->global_to_D);CHKERRQ(ierr); 112b4319ba4SBarry Smith ierr = VecScatterCreate(pcis->vec1_N,pcis->is_B_local,pcis->vec1_B,(IS)0,&pcis->N_to_B);CHKERRQ(ierr); 11323ce1328SBarry Smith ierr = VecScatterCreate(pcis->vec1_global,pcis->is_B_global,pcis->vec1_B,(IS)0,&pcis->global_to_B);CHKERRQ(ierr); 114b4319ba4SBarry Smith 115b4319ba4SBarry Smith /* Creating scaling "matrix" D, from information in vec1_N */ 116b4319ba4SBarry Smith ierr = VecDuplicate(pcis->vec1_B,&pcis->D);CHKERRQ(ierr); 117b4319ba4SBarry Smith ierr = VecScatterBegin(pcis->vec1_N,pcis->D,INSERT_VALUES,SCATTER_FORWARD,pcis->N_to_B);CHKERRQ(ierr); 118b4319ba4SBarry Smith ierr = VecScatterEnd (pcis->vec1_N,pcis->D,INSERT_VALUES,SCATTER_FORWARD,pcis->N_to_B);CHKERRQ(ierr); 119b4319ba4SBarry Smith ierr = VecReciprocal(pcis->D);CHKERRQ(ierr); 120b4319ba4SBarry Smith 121b4319ba4SBarry Smith /* See historical note 01, at the bottom of this file. */ 122b4319ba4SBarry Smith 123b4319ba4SBarry Smith /* 124b4319ba4SBarry Smith Creating the KSP contexts for the local Dirichlet and Neumann problems. 125b4319ba4SBarry Smith */ 126b4319ba4SBarry Smith { 127b4319ba4SBarry Smith PC pc_ctx; 128b4319ba4SBarry Smith /* Dirichlet */ 129b4319ba4SBarry Smith ierr = KSPCreate(PETSC_COMM_SELF,&pcis->ksp_D);CHKERRQ(ierr); 130b4319ba4SBarry Smith ierr = KSPSetOperators(pcis->ksp_D,pcis->A_II,pcis->A_II,SAME_PRECONDITIONER);CHKERRQ(ierr); 131b4319ba4SBarry Smith ierr = KSPSetOptionsPrefix(pcis->ksp_D,"is_localD_");CHKERRQ(ierr); 132b4319ba4SBarry Smith ierr = KSPGetPC(pcis->ksp_D,&pc_ctx);CHKERRQ(ierr); 133b4319ba4SBarry Smith ierr = PCSetType(pc_ctx,PCLU);CHKERRQ(ierr); 134b4319ba4SBarry Smith ierr = KSPSetType(pcis->ksp_D,KSPPREONLY);CHKERRQ(ierr); 135b4319ba4SBarry Smith ierr = KSPSetFromOptions(pcis->ksp_D);CHKERRQ(ierr); 136b4319ba4SBarry Smith /* the vectors in the following line are dummy arguments, just telling the KSP the vector size. Values are not used */ 137b4319ba4SBarry Smith ierr = KSPSetUp(pcis->ksp_D);CHKERRQ(ierr); 138b4319ba4SBarry Smith /* Neumann */ 139b4319ba4SBarry Smith ierr = KSPCreate(PETSC_COMM_SELF,&pcis->ksp_N);CHKERRQ(ierr); 140b4319ba4SBarry Smith ierr = KSPSetOperators(pcis->ksp_N,matis->A,matis->A,SAME_PRECONDITIONER);CHKERRQ(ierr); 141b4319ba4SBarry Smith ierr = KSPSetOptionsPrefix(pcis->ksp_N,"is_localN_");CHKERRQ(ierr); 142b4319ba4SBarry Smith ierr = KSPGetPC(pcis->ksp_N,&pc_ctx);CHKERRQ(ierr); 143b4319ba4SBarry Smith ierr = PCSetType(pc_ctx,PCLU);CHKERRQ(ierr); 144b4319ba4SBarry Smith ierr = KSPSetType(pcis->ksp_N,KSPPREONLY);CHKERRQ(ierr); 145b4319ba4SBarry Smith ierr = KSPSetFromOptions(pcis->ksp_N);CHKERRQ(ierr); 146b4319ba4SBarry Smith { 147b4319ba4SBarry Smith PetscTruth damp_fixed, 148b4319ba4SBarry Smith remove_nullspace_fixed, 149b4319ba4SBarry Smith set_damping_factor_floating, 150b4319ba4SBarry Smith not_damp_floating, 151b4319ba4SBarry Smith not_remove_nullspace_floating; 152b4319ba4SBarry Smith PetscReal fixed_factor, 153b4319ba4SBarry Smith floating_factor; 154b4319ba4SBarry Smith 155b4319ba4SBarry Smith ierr = PetscOptionsGetReal(pc_ctx->prefix,"-pc_is_damp_fixed",&fixed_factor,&damp_fixed);CHKERRQ(ierr); 156b4319ba4SBarry Smith if (!damp_fixed) { fixed_factor = 0.0; } 157b4319ba4SBarry Smith ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_damp_fixed",&damp_fixed);CHKERRQ(ierr); 158b4319ba4SBarry Smith 159b4319ba4SBarry Smith ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_remove_nullspace_fixed",&remove_nullspace_fixed);CHKERRQ(ierr); 160b4319ba4SBarry Smith 161b4319ba4SBarry Smith ierr = PetscOptionsGetReal(pc_ctx->prefix,"-pc_is_set_damping_factor_floating", 162b4319ba4SBarry Smith &floating_factor,&set_damping_factor_floating);CHKERRQ(ierr); 163b4319ba4SBarry Smith if (!set_damping_factor_floating) { floating_factor = 0.0; } 164b4319ba4SBarry Smith ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_set_damping_factor_floating",&set_damping_factor_floating);CHKERRQ(ierr); 165b4319ba4SBarry Smith if (!set_damping_factor_floating) { floating_factor = 1.e-12; } 166b4319ba4SBarry Smith 167b4319ba4SBarry Smith ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_not_damp_floating",¬_damp_floating);CHKERRQ(ierr); 168b4319ba4SBarry Smith 169b4319ba4SBarry Smith ierr = PetscOptionsHasName(pc_ctx->prefix,"-pc_is_not_remove_nullspace_floating",¬_remove_nullspace_floating);CHKERRQ(ierr); 170b4319ba4SBarry Smith 171b4319ba4SBarry Smith if (pcis->pure_neumann) { /* floating subdomain */ 172b4319ba4SBarry Smith if (!(not_damp_floating)) { 173afaefe49SHong Zhang ierr = PCFactorSetShiftNonzero(pc_ctx,floating_factor);CHKERRQ(ierr); 174b4319ba4SBarry Smith } 175b4319ba4SBarry Smith if (!(not_remove_nullspace_floating)){ 176b4319ba4SBarry Smith MatNullSpace nullsp; 177ee512c37SSatish Balay ierr = MatNullSpaceCreate(PETSC_COMM_SELF,PETSC_TRUE,0,PETSC_NULL,&nullsp);CHKERRQ(ierr); 178d8fd42c4SBarry Smith ierr = KSPSetNullSpace(pcis->ksp_N,nullsp);CHKERRQ(ierr); 179b4319ba4SBarry Smith ierr = MatNullSpaceDestroy(nullsp);CHKERRQ(ierr); 180b4319ba4SBarry Smith } 181b4319ba4SBarry Smith } else { /* fixed subdomain */ 182b4319ba4SBarry Smith if (damp_fixed) { 183afaefe49SHong Zhang ierr = PCFactorSetShiftNonzero(pc_ctx,fixed_factor);CHKERRQ(ierr); 184b4319ba4SBarry Smith } 185b4319ba4SBarry Smith if (remove_nullspace_fixed) { 186b4319ba4SBarry Smith MatNullSpace nullsp; 187ee512c37SSatish Balay ierr = MatNullSpaceCreate(PETSC_COMM_SELF,PETSC_TRUE,0,PETSC_NULL,&nullsp);CHKERRQ(ierr); 188d8fd42c4SBarry Smith ierr = KSPSetNullSpace(pcis->ksp_N,nullsp);CHKERRQ(ierr); 189b4319ba4SBarry Smith ierr = MatNullSpaceDestroy(nullsp);CHKERRQ(ierr); 190b4319ba4SBarry Smith } 191b4319ba4SBarry Smith } 192b4319ba4SBarry Smith } 193b4319ba4SBarry Smith /* the vectors in the following line are dummy arguments, just telling the KSP the vector size. Values are not used */ 194b4319ba4SBarry Smith ierr = KSPSetUp(pcis->ksp_N);CHKERRQ(ierr); 195b4319ba4SBarry Smith } 196b4319ba4SBarry Smith 1977c334f02SBarry Smith ierr = ISLocalToGlobalMappingGetInfo(((Mat_IS*)(pc->mat->data))->mapping,&(pcis->n_neigh),&(pcis->neigh),&(pcis->n_shared),&(pcis->shared));CHKERRQ(ierr); 198b4319ba4SBarry Smith pcis->ISLocalToGlobalMappingGetInfoWasCalled = PETSC_TRUE; 199b4319ba4SBarry Smith PetscFunctionReturn(0); 200b4319ba4SBarry Smith } 201b4319ba4SBarry Smith 202b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */ 203b4319ba4SBarry Smith /* 204b4319ba4SBarry Smith PCISDestroy - 205b4319ba4SBarry Smith */ 206b4319ba4SBarry Smith #undef __FUNCT__ 207b4319ba4SBarry Smith #define __FUNCT__ "PCISDestroy" 208*dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCISDestroy(PC pc) 209b4319ba4SBarry Smith { 210b4319ba4SBarry Smith PC_IS *pcis = (PC_IS*)(pc->data); 211dfbe8321SBarry Smith PetscErrorCode ierr; 212b4319ba4SBarry Smith 213b4319ba4SBarry Smith PetscFunctionBegin; 214b4319ba4SBarry Smith if (pcis->is_B_local) {ierr = ISDestroy(pcis->is_B_local);CHKERRQ(ierr);} 215b4319ba4SBarry Smith if (pcis->is_I_local) {ierr = ISDestroy(pcis->is_I_local);CHKERRQ(ierr);} 216b4319ba4SBarry Smith if (pcis->is_B_global) {ierr = ISDestroy(pcis->is_B_global);CHKERRQ(ierr);} 217b4319ba4SBarry Smith if (pcis->is_I_global) {ierr = ISDestroy(pcis->is_I_global);CHKERRQ(ierr);} 218b4319ba4SBarry Smith if (pcis->A_II) {ierr = MatDestroy(pcis->A_II);CHKERRQ(ierr);} 219b4319ba4SBarry Smith if (pcis->A_IB) {ierr = MatDestroy(pcis->A_IB);CHKERRQ(ierr);} 220b4319ba4SBarry Smith if (pcis->A_BI) {ierr = MatDestroy(pcis->A_BI);CHKERRQ(ierr);} 221b4319ba4SBarry Smith if (pcis->A_BB) {ierr = MatDestroy(pcis->A_BB);CHKERRQ(ierr);} 222b4319ba4SBarry Smith if (pcis->D) {ierr = VecDestroy(pcis->D);CHKERRQ(ierr);} 223b4319ba4SBarry Smith if (pcis->ksp_N) {ierr = KSPDestroy(pcis->ksp_N);CHKERRQ(ierr);} 224b4319ba4SBarry Smith if (pcis->ksp_D) {ierr = KSPDestroy(pcis->ksp_D);CHKERRQ(ierr);} 225b4319ba4SBarry Smith if (pcis->vec1_N) {ierr = VecDestroy(pcis->vec1_N);CHKERRQ(ierr);} 226b4319ba4SBarry Smith if (pcis->vec2_N) {ierr = VecDestroy(pcis->vec2_N);CHKERRQ(ierr);} 227b4319ba4SBarry Smith if (pcis->vec1_D) {ierr = VecDestroy(pcis->vec1_D);CHKERRQ(ierr);} 228b4319ba4SBarry Smith if (pcis->vec2_D) {ierr = VecDestroy(pcis->vec2_D);CHKERRQ(ierr);} 229b4319ba4SBarry Smith if (pcis->vec3_D) {ierr = VecDestroy(pcis->vec3_D);CHKERRQ(ierr);} 230b4319ba4SBarry Smith if (pcis->vec1_B) {ierr = VecDestroy(pcis->vec1_B);CHKERRQ(ierr);} 231b4319ba4SBarry Smith if (pcis->vec2_B) {ierr = VecDestroy(pcis->vec2_B);CHKERRQ(ierr);} 232b4319ba4SBarry Smith if (pcis->vec3_B) {ierr = VecDestroy(pcis->vec3_B);CHKERRQ(ierr);} 233b4319ba4SBarry Smith if (pcis->vec1_global) {ierr = VecDestroy(pcis->vec1_global);CHKERRQ(ierr);} 234b4319ba4SBarry Smith if (pcis->work_N) {ierr = PetscFree(pcis->work_N);CHKERRQ(ierr);} 235b4319ba4SBarry Smith if (pcis->global_to_D) {ierr = VecScatterDestroy(pcis->global_to_D);CHKERRQ(ierr);} 236b4319ba4SBarry Smith if (pcis->N_to_B) {ierr = VecScatterDestroy(pcis->N_to_B);CHKERRQ(ierr);} 237b4319ba4SBarry Smith if (pcis->global_to_B) {ierr = VecScatterDestroy(pcis->global_to_B);CHKERRQ(ierr);} 238b4319ba4SBarry Smith if (pcis->ISLocalToGlobalMappingGetInfoWasCalled) { 239b4319ba4SBarry Smith ierr = ISLocalToGlobalMappingRestoreInfo((ISLocalToGlobalMapping)0,&(pcis->n_neigh),&(pcis->neigh),&(pcis->n_shared),&(pcis->shared));CHKERRQ(ierr); 240b4319ba4SBarry Smith } 241b4319ba4SBarry Smith PetscFunctionReturn(0); 242b4319ba4SBarry Smith } 243b4319ba4SBarry Smith 244b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */ 245b4319ba4SBarry Smith /* 246b4319ba4SBarry Smith PCISCreate - 247b4319ba4SBarry Smith */ 248b4319ba4SBarry Smith #undef __FUNCT__ 249b4319ba4SBarry Smith #define __FUNCT__ "PCISCreate" 250*dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCISCreate(PC pc) 251b4319ba4SBarry Smith { 252b4319ba4SBarry Smith PC_IS *pcis = (PC_IS*)(pc->data); 253b4319ba4SBarry Smith 254b4319ba4SBarry Smith PetscFunctionBegin; 255b4319ba4SBarry Smith pcis->is_B_local = 0; 256b4319ba4SBarry Smith pcis->is_I_local = 0; 257b4319ba4SBarry Smith pcis->is_B_global = 0; 258b4319ba4SBarry Smith pcis->is_I_global = 0; 259b4319ba4SBarry Smith pcis->A_II = 0; 260b4319ba4SBarry Smith pcis->A_IB = 0; 261b4319ba4SBarry Smith pcis->A_BI = 0; 262b4319ba4SBarry Smith pcis->A_BB = 0; 263b4319ba4SBarry Smith pcis->D = 0; 264b4319ba4SBarry Smith pcis->ksp_N = 0; 265b4319ba4SBarry Smith pcis->ksp_D = 0; 266b4319ba4SBarry Smith pcis->vec1_N = 0; 267b4319ba4SBarry Smith pcis->vec2_N = 0; 268b4319ba4SBarry Smith pcis->vec1_D = 0; 269b4319ba4SBarry Smith pcis->vec2_D = 0; 270b4319ba4SBarry Smith pcis->vec3_D = 0; 271b4319ba4SBarry Smith pcis->vec1_B = 0; 272b4319ba4SBarry Smith pcis->vec2_B = 0; 273b4319ba4SBarry Smith pcis->vec3_B = 0; 274b4319ba4SBarry Smith pcis->vec1_global = 0; 275b4319ba4SBarry Smith pcis->work_N = 0; 276b4319ba4SBarry Smith pcis->global_to_D = 0; 277b4319ba4SBarry Smith pcis->N_to_B = 0; 278b4319ba4SBarry Smith pcis->global_to_B = 0; 279b4319ba4SBarry Smith pcis->ISLocalToGlobalMappingGetInfoWasCalled = PETSC_FALSE; 280b4319ba4SBarry Smith PetscFunctionReturn(0); 281b4319ba4SBarry Smith } 282b4319ba4SBarry Smith 283b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */ 284b4319ba4SBarry Smith /* 285b4319ba4SBarry Smith PCISApplySchur - 286b4319ba4SBarry Smith 287b4319ba4SBarry Smith Input parameters: 288b4319ba4SBarry Smith . pc - preconditioner context 289b4319ba4SBarry Smith . v - vector to which the Schur complement is to be applied (it is NOT modified inside this function, UNLESS vec2_B is null) 290b4319ba4SBarry Smith 291b4319ba4SBarry Smith Output parameters: 292b4319ba4SBarry Smith . vec1_B - result of Schur complement applied to chunk 293b4319ba4SBarry Smith . vec2_B - garbage (used as work space), or null (and v is used as workspace) 294b4319ba4SBarry Smith . vec1_D - garbage (used as work space) 295b4319ba4SBarry Smith . vec2_D - garbage (used as work space) 296b4319ba4SBarry Smith 297b4319ba4SBarry Smith */ 298b4319ba4SBarry Smith #undef __FUNCT__ 299b4319ba4SBarry Smith #define __FUNCT__ "PCIterSuApplySchur" 300*dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCISApplySchur(PC pc, Vec v, Vec vec1_B, Vec vec2_B, Vec vec1_D, Vec vec2_D) 301b4319ba4SBarry Smith { 302dfbe8321SBarry Smith PetscErrorCode ierr; 303b4319ba4SBarry Smith PetscScalar m_one = -1.0; 304b4319ba4SBarry Smith PC_IS *pcis = (PC_IS*)(pc->data); 305b4319ba4SBarry Smith 306b4319ba4SBarry Smith PetscFunctionBegin; 30713f74950SBarry Smith if (!vec2_B) { vec2_B = v; } 308b4319ba4SBarry Smith 309b4319ba4SBarry Smith ierr = MatMult(pcis->A_BB,v,vec1_B);CHKERRQ(ierr); 310b4319ba4SBarry Smith ierr = MatMult(pcis->A_IB,v,vec1_D);CHKERRQ(ierr); 31123ce1328SBarry Smith ierr = KSPSolve(pcis->ksp_D,vec1_D,vec2_D);CHKERRQ(ierr); 312b4319ba4SBarry Smith ierr = MatMult(pcis->A_BI,vec2_D,vec2_B);CHKERRQ(ierr); 313b4319ba4SBarry Smith ierr = VecAXPY(&m_one,vec2_B,vec1_B);CHKERRQ(ierr); 314b4319ba4SBarry Smith PetscFunctionReturn(0); 315b4319ba4SBarry Smith } 316b4319ba4SBarry Smith 317b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */ 318b4319ba4SBarry Smith /* 319b4319ba4SBarry Smith PCISScatterArrayNToVecB - Scatters interface node values from a big array (of all local nodes, interior or interface, 320b4319ba4SBarry Smith including ghosts) into an interface vector, when in SCATTER_FORWARD mode, or vice-versa, when in SCATTER_REVERSE 321b4319ba4SBarry Smith mode. 322b4319ba4SBarry Smith 323b4319ba4SBarry Smith Input parameters: 324b4319ba4SBarry Smith . pc - preconditioner context 325b4319ba4SBarry Smith . array_N - [when in SCATTER_FORWARD mode] Array to be scattered into the vector 326b4319ba4SBarry Smith . v_B - [when in SCATTER_REVERSE mode] Vector to be scattered into the array 327b4319ba4SBarry Smith 328b4319ba4SBarry Smith Output parameter: 329b4319ba4SBarry Smith . array_N - [when in SCATTER_REVERSE mode] Array to receive the scattered vector 330b4319ba4SBarry Smith . v_B - [when in SCATTER_FORWARD mode] Vector to receive the scattered array 331b4319ba4SBarry Smith 332b4319ba4SBarry Smith Notes: 333b4319ba4SBarry Smith The entries in the array that do not correspond to interface nodes remain unaltered. 334b4319ba4SBarry Smith */ 335b4319ba4SBarry Smith #undef __FUNCT__ 336b4319ba4SBarry Smith #define __FUNCT__ "PCISScatterArrayNToVecB" 337*dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCISScatterArrayNToVecB (PetscScalar *array_N, Vec v_B, InsertMode imode, ScatterMode smode, PC pc) 338b4319ba4SBarry Smith { 33913f74950SBarry Smith PetscInt i, *idex; 3406849ba73SBarry Smith PetscErrorCode ierr; 341b4319ba4SBarry Smith PetscScalar *array_B; 342b4319ba4SBarry Smith PC_IS *pcis = (PC_IS*)(pc->data); 343b4319ba4SBarry Smith 344b4319ba4SBarry Smith PetscFunctionBegin; 345b4319ba4SBarry Smith ierr = VecGetArray(v_B,&array_B);CHKERRQ(ierr); 346b4319ba4SBarry Smith ierr = ISGetIndices(pcis->is_B_local,&idex);CHKERRQ(ierr); 347b4319ba4SBarry Smith 348b4319ba4SBarry Smith if (smode == SCATTER_FORWARD) { 349b4319ba4SBarry Smith if (imode == INSERT_VALUES) { 350b4319ba4SBarry Smith for (i=0; i<pcis->n_B; i++) { array_B[i] = array_N[idex[i]]; } 351b4319ba4SBarry Smith } else { /* ADD_VALUES */ 352b4319ba4SBarry Smith for (i=0; i<pcis->n_B; i++) { array_B[i] += array_N[idex[i]]; } 353b4319ba4SBarry Smith } 354b4319ba4SBarry Smith } else { /* SCATTER_REVERSE */ 355b4319ba4SBarry Smith if (imode == INSERT_VALUES) { 356b4319ba4SBarry Smith for (i=0; i<pcis->n_B; i++) { array_N[idex[i]] = array_B[i]; } 357b4319ba4SBarry Smith } else { /* ADD_VALUES */ 358b4319ba4SBarry Smith for (i=0; i<pcis->n_B; i++) { array_N[idex[i]] += array_B[i]; } 359b4319ba4SBarry Smith } 360b4319ba4SBarry Smith } 361b4319ba4SBarry Smith ierr = ISRestoreIndices(pcis->is_B_local,&idex);CHKERRQ(ierr); 362b4319ba4SBarry Smith ierr = VecRestoreArray(v_B,&array_B);CHKERRQ(ierr); 363b4319ba4SBarry Smith PetscFunctionReturn(0); 364b4319ba4SBarry Smith } 365b4319ba4SBarry Smith 366b4319ba4SBarry Smith /* -------------------------------------------------------------------------- */ 367b4319ba4SBarry Smith /* 368b4319ba4SBarry Smith PCISApplyInvSchur - Solves the Neumann problem related to applying the inverse of the Schur complement. 369b4319ba4SBarry Smith More precisely, solves the problem: 370b4319ba4SBarry Smith [ A_II A_IB ] [ . ] [ 0 ] 371b4319ba4SBarry Smith [ ] [ ] = [ ] 372b4319ba4SBarry Smith [ A_BI A_BB ] [ x ] [ b ] 373b4319ba4SBarry Smith 374b4319ba4SBarry Smith Input parameters: 375b4319ba4SBarry Smith . pc - preconditioner context 376b4319ba4SBarry Smith . b - vector of local interface nodes (including ghosts) 377b4319ba4SBarry Smith 378b4319ba4SBarry Smith Output parameters: 379b4319ba4SBarry Smith . x - vector of local interface nodes (including ghosts); returns the application of the inverse of the Schur 380b4319ba4SBarry Smith complement to b 381b4319ba4SBarry Smith . vec1_N - vector of local nodes (interior and interface, including ghosts); returns garbage (used as work space) 382b4319ba4SBarry Smith . vec2_N - vector of local nodes (interior and interface, including ghosts); returns garbage (used as work space) 383b4319ba4SBarry Smith 384b4319ba4SBarry Smith */ 385b4319ba4SBarry Smith #undef __FUNCT__ 386b4319ba4SBarry Smith #define __FUNCT__ "PCISApplyInvSchur" 387*dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCISApplyInvSchur (PC pc, Vec b, Vec x, Vec vec1_N, Vec vec2_N) 388b4319ba4SBarry Smith { 389dfbe8321SBarry Smith PetscErrorCode ierr; 390b4319ba4SBarry Smith PC_IS *pcis = (PC_IS*)(pc->data); 391b4319ba4SBarry Smith PetscScalar zero = 0.0; 392b4319ba4SBarry Smith 393b4319ba4SBarry Smith PetscFunctionBegin; 394b4319ba4SBarry Smith /* 395b4319ba4SBarry Smith Neumann solvers. 396b4319ba4SBarry Smith Applying the inverse of the local Schur complement, i.e, solving a Neumann 397b4319ba4SBarry Smith Problem with zero at the interior nodes of the RHS and extracting the interface 398b4319ba4SBarry Smith part of the solution. inverse Schur complement is applied to b and the result 399b4319ba4SBarry Smith is stored in x. 400b4319ba4SBarry Smith */ 401b4319ba4SBarry Smith /* Setting the RHS vec1_N */ 402b4319ba4SBarry Smith ierr = VecSet(&zero,vec1_N);CHKERRQ(ierr); 403b4319ba4SBarry Smith ierr = VecScatterBegin(b,vec1_N,INSERT_VALUES,SCATTER_REVERSE,pcis->N_to_B);CHKERRQ(ierr); 404b4319ba4SBarry Smith ierr = VecScatterEnd (b,vec1_N,INSERT_VALUES,SCATTER_REVERSE,pcis->N_to_B);CHKERRQ(ierr); 405b4319ba4SBarry Smith /* Checking for consistency of the RHS */ 406b4319ba4SBarry Smith { 407b4319ba4SBarry Smith PetscTruth flg; 408b4319ba4SBarry Smith ierr = PetscOptionsHasName(PETSC_NULL,"-pc_is_check_consistency",&flg);CHKERRQ(ierr); 409b4319ba4SBarry Smith if (flg) { 410b4319ba4SBarry Smith PetscScalar average; 411b4319ba4SBarry Smith ierr = VecSum(vec1_N,&average);CHKERRQ(ierr); 412b4319ba4SBarry Smith average = average / ((PetscReal)pcis->n); 413b4319ba4SBarry Smith if (pcis->pure_neumann) { 414b4319ba4SBarry Smith ierr = PetscViewerASCIISynchronizedPrintf(PETSC_VIEWER_STDOUT_(pc->comm),"Subdomain %04d is floating. Average = % 1.14e\n", 415b4319ba4SBarry Smith PetscGlobalRank,PetscAbsScalar(average));CHKERRQ(ierr); 416b4319ba4SBarry Smith } else { 417b4319ba4SBarry Smith ierr = PetscViewerASCIISynchronizedPrintf(PETSC_VIEWER_STDOUT_(pc->comm),"Subdomain %04d is fixed. Average = % 1.14e\n", 418b4319ba4SBarry Smith PetscGlobalRank,PetscAbsScalar(average));CHKERRQ(ierr); 419b4319ba4SBarry Smith } 420b4319ba4SBarry Smith PetscViewerFlush(PETSC_VIEWER_STDOUT_(pc->comm)); 421b4319ba4SBarry Smith } 422b4319ba4SBarry Smith } 423b4319ba4SBarry Smith /* Solving the system for vec2_N */ 42423ce1328SBarry Smith ierr = KSPSolve(pcis->ksp_N,vec1_N,vec2_N);CHKERRQ(ierr); 425b4319ba4SBarry Smith /* Extracting the local interface vector out of the solution */ 426b4319ba4SBarry Smith ierr = VecScatterBegin(vec2_N,x,INSERT_VALUES,SCATTER_FORWARD,pcis->N_to_B);CHKERRQ(ierr); 427b4319ba4SBarry Smith ierr = VecScatterEnd (vec2_N,x,INSERT_VALUES,SCATTER_FORWARD,pcis->N_to_B);CHKERRQ(ierr); 428b4319ba4SBarry Smith PetscFunctionReturn(0); 429b4319ba4SBarry Smith } 430b4319ba4SBarry Smith 431b4319ba4SBarry Smith 432b4319ba4SBarry Smith 433b4319ba4SBarry Smith 434b4319ba4SBarry Smith 435b4319ba4SBarry Smith 436b4319ba4SBarry Smith 437b4319ba4SBarry Smith 438b4319ba4SBarry Smith 439