14b9ad928SBarry Smith 24b9ad928SBarry Smith /* -------------------------------------------------------------------- 34b9ad928SBarry Smith 45a46d3faSBarry Smith This file implements a Jacobi preconditioner in PETSc as part of PC. 55a46d3faSBarry Smith You can use this as a starting point for implementing your own 65a46d3faSBarry Smith preconditioner that is not provided with PETSc. (You might also consider 75a46d3faSBarry Smith just using PCSHELL) 84b9ad928SBarry Smith 94b9ad928SBarry Smith The following basic routines are required for each preconditioner. 104b9ad928SBarry Smith PCCreate_XXX() - Creates a preconditioner context 114b9ad928SBarry Smith PCSetFromOptions_XXX() - Sets runtime options 124b9ad928SBarry Smith PCApply_XXX() - Applies the preconditioner 134b9ad928SBarry Smith PCDestroy_XXX() - Destroys the preconditioner context 144b9ad928SBarry Smith where the suffix "_XXX" denotes a particular implementation, in 154b9ad928SBarry Smith this case we use _Jacobi (e.g., PCCreate_Jacobi, PCApply_Jacobi). 164b9ad928SBarry Smith These routines are actually called via the common user interface 174b9ad928SBarry Smith routines PCCreate(), PCSetFromOptions(), PCApply(), and PCDestroy(), 184b9ad928SBarry Smith so the application code interface remains identical for all 194b9ad928SBarry Smith preconditioners. 204b9ad928SBarry Smith 214b9ad928SBarry Smith Another key routine is: 224b9ad928SBarry Smith PCSetUp_XXX() - Prepares for the use of a preconditioner 234b9ad928SBarry Smith by setting data structures and options. The interface routine PCSetUp() 244b9ad928SBarry Smith is not usually called directly by the user, but instead is called by 254b9ad928SBarry Smith PCApply() if necessary. 264b9ad928SBarry Smith 274b9ad928SBarry Smith Additional basic routines are: 284b9ad928SBarry Smith PCView_XXX() - Prints details of runtime options that 294b9ad928SBarry Smith have actually been used. 304b9ad928SBarry Smith These are called by application codes via the interface routines 314b9ad928SBarry Smith PCView(). 324b9ad928SBarry Smith 334b9ad928SBarry Smith The various types of solvers (preconditioners, Krylov subspace methods, 344b9ad928SBarry Smith nonlinear solvers, timesteppers) are all organized similarly, so the 354b9ad928SBarry Smith above description applies to these categories also. One exception is 364b9ad928SBarry Smith that the analogues of PCApply() for these components are KSPSolve(), 374b9ad928SBarry Smith SNESSolve(), and TSSolve(). 384b9ad928SBarry Smith 394b9ad928SBarry Smith Additional optional functionality unique to preconditioners is left and 404b9ad928SBarry Smith right symmetric preconditioner application via PCApplySymmetricLeft() 414b9ad928SBarry Smith and PCApplySymmetricRight(). The Jacobi implementation is 424b9ad928SBarry Smith PCApplySymmetricLeftOrRight_Jacobi(). 434b9ad928SBarry Smith 444b9ad928SBarry Smith -------------------------------------------------------------------- */ 454b9ad928SBarry Smith 464b9ad928SBarry Smith /* 474b9ad928SBarry Smith Include files needed for the Jacobi preconditioner: 484b9ad928SBarry Smith pcimpl.h - private include file intended for use by all preconditioners 494b9ad928SBarry Smith */ 504b9ad928SBarry Smith 51af0996ceSBarry Smith #include <petsc/private/pcimpl.h> /*I "petscpc.h" I*/ 524b9ad928SBarry Smith 530a545947SLisandro Dalcin const char *const PCJacobiTypes[] = {"DIAGONAL","ROWMAX","ROWSUM","PCJacobiType","PC_JACOBI_",NULL}; 54baa89ecbSBarry Smith 554b9ad928SBarry Smith /* 564b9ad928SBarry Smith Private context (data structure) for the Jacobi preconditioner. 574b9ad928SBarry Smith */ 584b9ad928SBarry Smith typedef struct { 592fa5cd67SKarl Rupp Vec diag; /* vector containing the reciprocals of the diagonal elements of the preconditioner matrix */ 604b9ad928SBarry Smith Vec diagsqrt; /* vector containing the reciprocals of the square roots of 614b9ad928SBarry Smith the diagonal elements of the preconditioner matrix (used 624b9ad928SBarry Smith only for symmetric preconditioner application) */ 63baa89ecbSBarry Smith PetscBool userowmax; /* set with PCJacobiSetType() */ 64ace3abfcSBarry Smith PetscBool userowsum; 65ace3abfcSBarry Smith PetscBool useabs; /* use the absolute values of the diagonal entries */ 6667ed0f3bSStefano Zampini PetscBool fixdiag; /* fix zero diagonal terms */ 674b9ad928SBarry Smith } PC_Jacobi; 684b9ad928SBarry Smith 69baa89ecbSBarry Smith static PetscErrorCode PCJacobiSetType_Jacobi(PC pc,PCJacobiType type) 704b9ad928SBarry Smith { 71baa89ecbSBarry Smith PC_Jacobi *j = (PC_Jacobi*)pc->data; 724b9ad928SBarry Smith 734b9ad928SBarry Smith PetscFunctionBegin; 74baa89ecbSBarry Smith j->userowmax = PETSC_FALSE; 75baa89ecbSBarry Smith j->userowsum = PETSC_FALSE; 76baa89ecbSBarry Smith if (type == PC_JACOBI_ROWMAX) { 774b9ad928SBarry Smith j->userowmax = PETSC_TRUE; 78baa89ecbSBarry Smith } else if (type == PC_JACOBI_ROWSUM) { 79baa89ecbSBarry Smith j->userowsum = PETSC_TRUE; 80baa89ecbSBarry Smith } 814b9ad928SBarry Smith PetscFunctionReturn(0); 824b9ad928SBarry Smith } 834b9ad928SBarry Smith 84baa89ecbSBarry Smith static PetscErrorCode PCJacobiGetType_Jacobi(PC pc,PCJacobiType *type) 8586697f06SMatthew Knepley { 86baa89ecbSBarry Smith PC_Jacobi *j = (PC_Jacobi*)pc->data; 8786697f06SMatthew Knepley 8886697f06SMatthew Knepley PetscFunctionBegin; 89baa89ecbSBarry Smith if (j->userowmax) { 90baa89ecbSBarry Smith *type = PC_JACOBI_ROWMAX; 91baa89ecbSBarry Smith } else if (j->userowsum) { 92baa89ecbSBarry Smith *type = PC_JACOBI_ROWSUM; 93baa89ecbSBarry Smith } else { 94baa89ecbSBarry Smith *type = PC_JACOBI_DIAGONAL; 95baa89ecbSBarry Smith } 9686697f06SMatthew Knepley PetscFunctionReturn(0); 9786697f06SMatthew Knepley } 9886697f06SMatthew Knepley 99baa89ecbSBarry Smith static PetscErrorCode PCJacobiSetUseAbs_Jacobi(PC pc,PetscBool flg) 100cd47f5d9SBarry Smith { 101baa89ecbSBarry Smith PC_Jacobi *j = (PC_Jacobi*)pc->data; 102cd47f5d9SBarry Smith 103cd47f5d9SBarry Smith PetscFunctionBegin; 104baa89ecbSBarry Smith j->useabs = flg; 105baa89ecbSBarry Smith PetscFunctionReturn(0); 106baa89ecbSBarry Smith } 107baa89ecbSBarry Smith 108baa89ecbSBarry Smith static PetscErrorCode PCJacobiGetUseAbs_Jacobi(PC pc,PetscBool *flg) 109baa89ecbSBarry Smith { 110baa89ecbSBarry Smith PC_Jacobi *j = (PC_Jacobi*)pc->data; 111baa89ecbSBarry Smith 112baa89ecbSBarry Smith PetscFunctionBegin; 113baa89ecbSBarry Smith *flg = j->useabs; 114cd47f5d9SBarry Smith PetscFunctionReturn(0); 115cd47f5d9SBarry Smith } 116cd47f5d9SBarry Smith 11767ed0f3bSStefano Zampini static PetscErrorCode PCJacobiSetFixDiagonal_Jacobi(PC pc,PetscBool flg) 11867ed0f3bSStefano Zampini { 11967ed0f3bSStefano Zampini PC_Jacobi *j = (PC_Jacobi*)pc->data; 12067ed0f3bSStefano Zampini 12167ed0f3bSStefano Zampini PetscFunctionBegin; 12267ed0f3bSStefano Zampini j->fixdiag = flg; 12367ed0f3bSStefano Zampini PetscFunctionReturn(0); 12467ed0f3bSStefano Zampini } 12567ed0f3bSStefano Zampini 12667ed0f3bSStefano Zampini static PetscErrorCode PCJacobiGetFixDiagonal_Jacobi(PC pc,PetscBool *flg) 12767ed0f3bSStefano Zampini { 12867ed0f3bSStefano Zampini PC_Jacobi *j = (PC_Jacobi*)pc->data; 12967ed0f3bSStefano Zampini 13067ed0f3bSStefano Zampini PetscFunctionBegin; 13167ed0f3bSStefano Zampini *flg = j->fixdiag; 13267ed0f3bSStefano Zampini PetscFunctionReturn(0); 13367ed0f3bSStefano Zampini } 13467ed0f3bSStefano Zampini 1354b9ad928SBarry Smith /* -------------------------------------------------------------------------- */ 1364b9ad928SBarry Smith /* 1374b9ad928SBarry Smith PCSetUp_Jacobi - Prepares for the use of the Jacobi preconditioner 1384b9ad928SBarry Smith by setting data structures and options. 1394b9ad928SBarry Smith 1404b9ad928SBarry Smith Input Parameter: 1414b9ad928SBarry Smith . pc - the preconditioner context 1424b9ad928SBarry Smith 1434b9ad928SBarry Smith Application Interface Routine: PCSetUp() 1444b9ad928SBarry Smith 1454b9ad928SBarry Smith Notes: 1464b9ad928SBarry Smith The interface routine PCSetUp() is not usually called directly by 1474b9ad928SBarry Smith the user, but instead is called by PCApply() if necessary. 1484b9ad928SBarry Smith */ 1496849ba73SBarry Smith static PetscErrorCode PCSetUp_Jacobi(PC pc) 1504b9ad928SBarry Smith { 1514b9ad928SBarry Smith PC_Jacobi *jac = (PC_Jacobi*)pc->data; 1524b9ad928SBarry Smith Vec diag,diagsqrt; 153cd47f5d9SBarry Smith PetscInt n,i; 1544b9ad928SBarry Smith PetscScalar *x; 155ace3abfcSBarry Smith PetscBool zeroflag = PETSC_FALSE; 1564b9ad928SBarry Smith 1574b9ad928SBarry Smith PetscFunctionBegin; 1584b9ad928SBarry Smith /* 1594b9ad928SBarry Smith For most preconditioners the code would begin here something like 1604b9ad928SBarry Smith 1614b9ad928SBarry Smith if (pc->setupcalled == 0) { allocate space the first time this is ever called 1629566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(pc->mat,&jac->diag)); 1633bb1ff40SBarry Smith PetscLogObjectParent((PetscObject)pc,(PetscObject)jac->diag); 1644b9ad928SBarry Smith } 1654b9ad928SBarry Smith 1664b9ad928SBarry Smith But for this preconditioner we want to support use of both the matrix' diagonal 1674b9ad928SBarry Smith elements (for left or right preconditioning) and square root of diagonal elements 1684b9ad928SBarry Smith (for symmetric preconditioning). Hence we do not allocate space here, since we 1694b9ad928SBarry Smith don't know at this point which will be needed (diag and/or diagsqrt) until the user 1704b9ad928SBarry Smith applies the preconditioner, and we don't want to allocate BOTH unless we need 1714b9ad928SBarry Smith them both. Thus, the diag and diagsqrt are allocated in PCSetUp_Jacobi_NonSymmetric() 1724b9ad928SBarry Smith and PCSetUp_Jacobi_Symmetric(), respectively. 1734b9ad928SBarry Smith */ 1744b9ad928SBarry Smith 1754b9ad928SBarry Smith /* 1764b9ad928SBarry Smith Here we set up the preconditioner; that is, we copy the diagonal values from 1774b9ad928SBarry Smith the matrix and put them into a format to make them quick to apply as a preconditioner. 1784b9ad928SBarry Smith */ 1794b9ad928SBarry Smith diag = jac->diag; 1804b9ad928SBarry Smith diagsqrt = jac->diagsqrt; 1814b9ad928SBarry Smith 1824b9ad928SBarry Smith if (diag) { 18367ed0f3bSStefano Zampini PetscBool isspd; 18467ed0f3bSStefano Zampini 1854b9ad928SBarry Smith if (jac->userowmax) { 1869566063dSJacob Faibussowitsch PetscCall(MatGetRowMaxAbs(pc->pmat,diag,NULL)); 18786697f06SMatthew Knepley } else if (jac->userowsum) { 1889566063dSJacob Faibussowitsch PetscCall(MatGetRowSum(pc->pmat,diag)); 1894b9ad928SBarry Smith } else { 1909566063dSJacob Faibussowitsch PetscCall(MatGetDiagonal(pc->pmat,diag)); 1914b9ad928SBarry Smith } 1929566063dSJacob Faibussowitsch PetscCall(VecReciprocal(diag)); 193cd47f5d9SBarry Smith if (jac->useabs) { 1949566063dSJacob Faibussowitsch PetscCall(VecAbs(diag)); 195cd47f5d9SBarry Smith } 1969566063dSJacob Faibussowitsch PetscCall(MatGetOption(pc->pmat,MAT_SPD,&isspd)); 19767ed0f3bSStefano Zampini if (jac->fixdiag && !isspd) { 1989566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(diag,&n)); 1999566063dSJacob Faibussowitsch PetscCall(VecGetArray(diag,&x)); 2004b9ad928SBarry Smith for (i=0; i<n; i++) { 2014b9ad928SBarry Smith if (x[i] == 0.0) { 2024b9ad928SBarry Smith x[i] = 1.0; 203cd47f5d9SBarry Smith zeroflag = PETSC_TRUE; 2044b9ad928SBarry Smith } 2054b9ad928SBarry Smith } 2069566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(diag,&x)); 2074b9ad928SBarry Smith } 20867ed0f3bSStefano Zampini } 2094b9ad928SBarry Smith if (diagsqrt) { 2104b9ad928SBarry Smith if (jac->userowmax) { 2119566063dSJacob Faibussowitsch PetscCall(MatGetRowMaxAbs(pc->pmat,diagsqrt,NULL)); 21286697f06SMatthew Knepley } else if (jac->userowsum) { 2139566063dSJacob Faibussowitsch PetscCall(MatGetRowSum(pc->pmat,diagsqrt)); 2144b9ad928SBarry Smith } else { 2159566063dSJacob Faibussowitsch PetscCall(MatGetDiagonal(pc->pmat,diagsqrt)); 2164b9ad928SBarry Smith } 2179566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(diagsqrt,&n)); 2189566063dSJacob Faibussowitsch PetscCall(VecGetArray(diagsqrt,&x)); 2194b9ad928SBarry Smith for (i=0; i<n; i++) { 2208f1a2a5eSBarry Smith if (x[i] != 0.0) x[i] = 1.0/PetscSqrtReal(PetscAbsScalar(x[i])); 2214b9ad928SBarry Smith else { 2224b9ad928SBarry Smith x[i] = 1.0; 223cd47f5d9SBarry Smith zeroflag = PETSC_TRUE; 2244b9ad928SBarry Smith } 2254b9ad928SBarry Smith } 2269566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(diagsqrt,&x)); 2274b9ad928SBarry Smith } 2284b9ad928SBarry Smith if (zeroflag) { 2299566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc,"Zero detected in diagonal of matrix, using 1 at those locations\n")); 2304b9ad928SBarry Smith } 2314b9ad928SBarry Smith PetscFunctionReturn(0); 2324b9ad928SBarry Smith } 2334b9ad928SBarry Smith /* -------------------------------------------------------------------------- */ 2344b9ad928SBarry Smith /* 2354b9ad928SBarry Smith PCSetUp_Jacobi_Symmetric - Allocates the vector needed to store the 2364b9ad928SBarry Smith inverse of the square root of the diagonal entries of the matrix. This 2374b9ad928SBarry Smith is used for symmetric application of the Jacobi preconditioner. 2384b9ad928SBarry Smith 2394b9ad928SBarry Smith Input Parameter: 2404b9ad928SBarry Smith . pc - the preconditioner context 2414b9ad928SBarry Smith */ 2426849ba73SBarry Smith static PetscErrorCode PCSetUp_Jacobi_Symmetric(PC pc) 2434b9ad928SBarry Smith { 2444b9ad928SBarry Smith PC_Jacobi *jac = (PC_Jacobi*)pc->data; 2454b9ad928SBarry Smith 2464b9ad928SBarry Smith PetscFunctionBegin; 2479566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(pc->pmat,&jac->diagsqrt,NULL)); 2489566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)jac->diagsqrt)); 2499566063dSJacob Faibussowitsch PetscCall(PCSetUp_Jacobi(pc)); 2504b9ad928SBarry Smith PetscFunctionReturn(0); 2514b9ad928SBarry Smith } 2524b9ad928SBarry Smith /* -------------------------------------------------------------------------- */ 2534b9ad928SBarry Smith /* 2544b9ad928SBarry Smith PCSetUp_Jacobi_NonSymmetric - Allocates the vector needed to store the 2554b9ad928SBarry Smith inverse of the diagonal entries of the matrix. This is used for left of 2564b9ad928SBarry Smith right application of the Jacobi preconditioner. 2574b9ad928SBarry Smith 2584b9ad928SBarry Smith Input Parameter: 2594b9ad928SBarry Smith . pc - the preconditioner context 2604b9ad928SBarry Smith */ 2616849ba73SBarry Smith static PetscErrorCode PCSetUp_Jacobi_NonSymmetric(PC pc) 2624b9ad928SBarry Smith { 2634b9ad928SBarry Smith PC_Jacobi *jac = (PC_Jacobi*)pc->data; 2644b9ad928SBarry Smith 2654b9ad928SBarry Smith PetscFunctionBegin; 2669566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(pc->pmat,&jac->diag,NULL)); 2679566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)pc,(PetscObject)jac->diag)); 2689566063dSJacob Faibussowitsch PetscCall(PCSetUp_Jacobi(pc)); 2694b9ad928SBarry Smith PetscFunctionReturn(0); 2704b9ad928SBarry Smith } 2714b9ad928SBarry Smith /* -------------------------------------------------------------------------- */ 2724b9ad928SBarry Smith /* 2734b9ad928SBarry Smith PCApply_Jacobi - Applies the Jacobi preconditioner to a vector. 2744b9ad928SBarry Smith 2754b9ad928SBarry Smith Input Parameters: 2764b9ad928SBarry Smith . pc - the preconditioner context 2774b9ad928SBarry Smith . x - input vector 2784b9ad928SBarry Smith 2794b9ad928SBarry Smith Output Parameter: 2804b9ad928SBarry Smith . y - output vector 2814b9ad928SBarry Smith 2824b9ad928SBarry Smith Application Interface Routine: PCApply() 2834b9ad928SBarry Smith */ 2846849ba73SBarry Smith static PetscErrorCode PCApply_Jacobi(PC pc,Vec x,Vec y) 2854b9ad928SBarry Smith { 2864b9ad928SBarry Smith PC_Jacobi *jac = (PC_Jacobi*)pc->data; 2874b9ad928SBarry Smith 2884b9ad928SBarry Smith PetscFunctionBegin; 2894b9ad928SBarry Smith if (!jac->diag) { 2909566063dSJacob Faibussowitsch PetscCall(PCSetUp_Jacobi_NonSymmetric(pc)); 2914b9ad928SBarry Smith } 2929566063dSJacob Faibussowitsch PetscCall(VecPointwiseMult(y,x,jac->diag)); 2934b9ad928SBarry Smith PetscFunctionReturn(0); 2944b9ad928SBarry Smith } 2954b9ad928SBarry Smith /* -------------------------------------------------------------------------- */ 2964b9ad928SBarry Smith /* 2974b9ad928SBarry Smith PCApplySymmetricLeftOrRight_Jacobi - Applies the left or right part of a 2984b9ad928SBarry Smith symmetric preconditioner to a vector. 2994b9ad928SBarry Smith 3004b9ad928SBarry Smith Input Parameters: 3014b9ad928SBarry Smith . pc - the preconditioner context 3024b9ad928SBarry Smith . x - input vector 3034b9ad928SBarry Smith 3044b9ad928SBarry Smith Output Parameter: 3054b9ad928SBarry Smith . y - output vector 3064b9ad928SBarry Smith 3074b9ad928SBarry Smith Application Interface Routines: PCApplySymmetricLeft(), PCApplySymmetricRight() 3084b9ad928SBarry Smith */ 3096849ba73SBarry Smith static PetscErrorCode PCApplySymmetricLeftOrRight_Jacobi(PC pc,Vec x,Vec y) 3104b9ad928SBarry Smith { 3114b9ad928SBarry Smith PC_Jacobi *jac = (PC_Jacobi*)pc->data; 3124b9ad928SBarry Smith 3134b9ad928SBarry Smith PetscFunctionBegin; 3144b9ad928SBarry Smith if (!jac->diagsqrt) { 3159566063dSJacob Faibussowitsch PetscCall(PCSetUp_Jacobi_Symmetric(pc)); 3164b9ad928SBarry Smith } 3179566063dSJacob Faibussowitsch PetscCall(VecPointwiseMult(y,x,jac->diagsqrt)); 3184b9ad928SBarry Smith PetscFunctionReturn(0); 3194b9ad928SBarry Smith } 32067ed0f3bSStefano Zampini 3214b9ad928SBarry Smith /* -------------------------------------------------------------------------- */ 322a06653b4SBarry Smith static PetscErrorCode PCReset_Jacobi(PC pc) 323a06653b4SBarry Smith { 324a06653b4SBarry Smith PC_Jacobi *jac = (PC_Jacobi*)pc->data; 325a06653b4SBarry Smith 326a06653b4SBarry Smith PetscFunctionBegin; 3279566063dSJacob Faibussowitsch PetscCall(VecDestroy(&jac->diag)); 3289566063dSJacob Faibussowitsch PetscCall(VecDestroy(&jac->diagsqrt)); 329a06653b4SBarry Smith PetscFunctionReturn(0); 330a06653b4SBarry Smith } 331a06653b4SBarry Smith 3324b9ad928SBarry Smith /* 3334b9ad928SBarry Smith PCDestroy_Jacobi - Destroys the private context for the Jacobi preconditioner 3344b9ad928SBarry Smith that was created with PCCreate_Jacobi(). 3354b9ad928SBarry Smith 3364b9ad928SBarry Smith Input Parameter: 3374b9ad928SBarry Smith . pc - the preconditioner context 3384b9ad928SBarry Smith 3394b9ad928SBarry Smith Application Interface Routine: PCDestroy() 3404b9ad928SBarry Smith */ 3416849ba73SBarry Smith static PetscErrorCode PCDestroy_Jacobi(PC pc) 3424b9ad928SBarry Smith { 3434b9ad928SBarry Smith PetscFunctionBegin; 3449566063dSJacob Faibussowitsch PetscCall(PCReset_Jacobi(pc)); 3459566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)pc,"PCJacobiSetType_C",NULL)); 3469566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)pc,"PCJacobiGetType_C",NULL)); 3479566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)pc,"PCJacobiSetUseAbs_C",NULL)); 3489566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)pc,"PCJacobiGetUseAbs_C",NULL)); 3499566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)pc,"PCJacobiSetFixDiagonal_C",NULL)); 3509566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)pc,"PCJacobiGetFixDiagonal_C",NULL)); 3514b9ad928SBarry Smith 3524b9ad928SBarry Smith /* 3534b9ad928SBarry Smith Free the private data structure that was hanging off the PC 3544b9ad928SBarry Smith */ 3559566063dSJacob Faibussowitsch PetscCall(PetscFree(pc->data)); 3564b9ad928SBarry Smith PetscFunctionReturn(0); 3574b9ad928SBarry Smith } 3584b9ad928SBarry Smith 3594416b707SBarry Smith static PetscErrorCode PCSetFromOptions_Jacobi(PetscOptionItems *PetscOptionsObject,PC pc) 3604b9ad928SBarry Smith { 3614b9ad928SBarry Smith PC_Jacobi *jac = (PC_Jacobi*)pc->data; 362baa89ecbSBarry Smith PetscBool flg; 363baa89ecbSBarry Smith PCJacobiType deflt,type; 3644b9ad928SBarry Smith 3654b9ad928SBarry Smith PetscFunctionBegin; 3669566063dSJacob Faibussowitsch PetscCall(PCJacobiGetType(pc,&deflt)); 367d0609cedSBarry Smith PetscOptionsHeadBegin(PetscOptionsObject,"Jacobi options"); 3689566063dSJacob Faibussowitsch PetscCall(PetscOptionsEnum("-pc_jacobi_type","How to construct diagonal matrix","PCJacobiSetType",PCJacobiTypes,(PetscEnum)deflt,(PetscEnum*)&type,&flg)); 369baa89ecbSBarry Smith if (flg) { 3709566063dSJacob Faibussowitsch PetscCall(PCJacobiSetType(pc,type)); 371baa89ecbSBarry Smith } 3729566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-pc_jacobi_abs","Use absolute values of diagonal entries","PCJacobiSetUseAbs",jac->useabs,&jac->useabs,NULL)); 3739566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-pc_jacobi_fixdiagonal","Fix null terms on diagonal","PCJacobiSetFixDiagonal",jac->fixdiag,&jac->fixdiag,NULL)); 374d0609cedSBarry Smith PetscOptionsHeadEnd(); 3754b9ad928SBarry Smith PetscFunctionReturn(0); 3764b9ad928SBarry Smith } 3774b9ad928SBarry Smith 378569e28a7SMatthew G. Knepley static PetscErrorCode PCView_Jacobi(PC pc, PetscViewer viewer) 379569e28a7SMatthew G. Knepley { 380569e28a7SMatthew G. Knepley PC_Jacobi *jac = (PC_Jacobi *) pc->data; 381569e28a7SMatthew G. Knepley PetscBool iascii; 382569e28a7SMatthew G. Knepley 383569e28a7SMatthew G. Knepley PetscFunctionBegin; 3849566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERASCII, &iascii)); 385569e28a7SMatthew G. Knepley if (iascii) { 386569e28a7SMatthew G. Knepley PCJacobiType type; 38767ed0f3bSStefano Zampini PetscBool useAbs,fixdiag; 388569e28a7SMatthew G. Knepley PetscViewerFormat format; 389569e28a7SMatthew G. Knepley 3909566063dSJacob Faibussowitsch PetscCall(PCJacobiGetType(pc, &type)); 3919566063dSJacob Faibussowitsch PetscCall(PCJacobiGetUseAbs(pc, &useAbs)); 3929566063dSJacob Faibussowitsch PetscCall(PCJacobiGetFixDiagonal(pc, &fixdiag)); 3939566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, " type %s%s%s\n", PCJacobiTypes[type], useAbs ? ", using absolute value of entries" : "", !fixdiag ? ", not checking null diagonal entries" : "")); 3949566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 395569e28a7SMatthew G. Knepley if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 3969566063dSJacob Faibussowitsch PetscCall(VecView(jac->diag, viewer)); 397569e28a7SMatthew G. Knepley } 398569e28a7SMatthew G. Knepley } 399569e28a7SMatthew G. Knepley PetscFunctionReturn(0); 400569e28a7SMatthew G. Knepley } 401569e28a7SMatthew G. Knepley 4024b9ad928SBarry Smith /* -------------------------------------------------------------------------- */ 4034b9ad928SBarry Smith /* 4044b9ad928SBarry Smith PCCreate_Jacobi - Creates a Jacobi preconditioner context, PC_Jacobi, 4054b9ad928SBarry Smith and sets this as the private data within the generic preconditioning 4064b9ad928SBarry Smith context, PC, that was created within PCCreate(). 4074b9ad928SBarry Smith 4084b9ad928SBarry Smith Input Parameter: 4094b9ad928SBarry Smith . pc - the preconditioner context 4104b9ad928SBarry Smith 4114b9ad928SBarry Smith Application Interface Routine: PCCreate() 4124b9ad928SBarry Smith */ 4134b9ad928SBarry Smith 4144b9ad928SBarry Smith /*MC 4155a46d3faSBarry Smith PCJACOBI - Jacobi (i.e. diagonal scaling preconditioning) 4164b9ad928SBarry Smith 4174b9ad928SBarry Smith Options Database Key: 418967c93d3SBarry Smith + -pc_jacobi_type <diagonal,rowmax,rowsum> - approach for forming the preconditioner 41967ed0f3bSStefano Zampini . -pc_jacobi_abs - use the absolute value of the diagonal entry 420147403d9SBarry Smith - -pc_jacobi_fixdiag - fix for zero diagonal terms by placing 1.0 in those locations 4214b9ad928SBarry Smith 4224b9ad928SBarry Smith Level: beginner 4234b9ad928SBarry Smith 42495452b02SPatrick Sanan Notes: 42595452b02SPatrick Sanan By using KSPSetPCSide(ksp,PC_SYMMETRIC) or -ksp_pc_side symmetric 4264b9ad928SBarry Smith can scale each side of the matrix by the square root of the diagonal entries. 4274b9ad928SBarry Smith 4284b9ad928SBarry Smith Zero entries along the diagonal are replaced with the value 1.0 4294b9ad928SBarry Smith 430*468ae2e8SBarry Smith See PCPBJACOBI for fixed-size point block, PCVPBJACOBI for variable-sized point block, and PCBJACOBI for large size blocks 431422a814eSBarry Smith 4324b9ad928SBarry Smith .seealso: PCCreate(), PCSetType(), PCType (for list of available types), PC, 43367ed0f3bSStefano Zampini PCJacobiSetType(), PCJacobiSetUseAbs(), PCJacobiGetUseAbs(), 434*468ae2e8SBarry Smith PCJacobiSetFixDiagonal(), PCJacobiGetFixDiagonal() 435*468ae2e8SBarry Smith PCJacobiSetType(), PCJacobiSetUseAbs(), PCJacobiGetUseAbs(), PCPBJACOBI, PCBJACOBI, PCVPBJACOBI 4364b9ad928SBarry Smith M*/ 4374b9ad928SBarry Smith 4388cc058d9SJed Brown PETSC_EXTERN PetscErrorCode PCCreate_Jacobi(PC pc) 4394b9ad928SBarry Smith { 4404b9ad928SBarry Smith PC_Jacobi *jac; 4414b9ad928SBarry Smith 4424b9ad928SBarry Smith PetscFunctionBegin; 4434b9ad928SBarry Smith /* 4444b9ad928SBarry Smith Creates the private data structure for this preconditioner and 4454b9ad928SBarry Smith attach it to the PC object. 4464b9ad928SBarry Smith */ 4479566063dSJacob Faibussowitsch PetscCall(PetscNewLog(pc,&jac)); 4484b9ad928SBarry Smith pc->data = (void*)jac; 4494b9ad928SBarry Smith 4504b9ad928SBarry Smith /* 4514b9ad928SBarry Smith Initialize the pointers to vectors to ZERO; these will be used to store 4524b9ad928SBarry Smith diagonal entries of the matrix for fast preconditioner application. 4534b9ad928SBarry Smith */ 4540a545947SLisandro Dalcin jac->diag = NULL; 4550a545947SLisandro Dalcin jac->diagsqrt = NULL; 4564b9ad928SBarry Smith jac->userowmax = PETSC_FALSE; 45786697f06SMatthew Knepley jac->userowsum = PETSC_FALSE; 458cd47f5d9SBarry Smith jac->useabs = PETSC_FALSE; 45967ed0f3bSStefano Zampini jac->fixdiag = PETSC_TRUE; 4604b9ad928SBarry Smith 4614b9ad928SBarry Smith /* 4624b9ad928SBarry Smith Set the pointers for the functions that are provided above. 4634b9ad928SBarry Smith Now when the user-level routines (such as PCApply(), PCDestroy(), etc.) 4644b9ad928SBarry Smith are called, they will automatically call these functions. Note we 4654b9ad928SBarry Smith choose not to provide a couple of these functions since they are 4664b9ad928SBarry Smith not needed. 4674b9ad928SBarry Smith */ 4684b9ad928SBarry Smith pc->ops->apply = PCApply_Jacobi; 4694b9ad928SBarry Smith pc->ops->applytranspose = PCApply_Jacobi; 4704b9ad928SBarry Smith pc->ops->setup = PCSetUp_Jacobi; 471a06653b4SBarry Smith pc->ops->reset = PCReset_Jacobi; 4724b9ad928SBarry Smith pc->ops->destroy = PCDestroy_Jacobi; 4734b9ad928SBarry Smith pc->ops->setfromoptions = PCSetFromOptions_Jacobi; 474569e28a7SMatthew G. Knepley pc->ops->view = PCView_Jacobi; 4750a545947SLisandro Dalcin pc->ops->applyrichardson = NULL; 4764b9ad928SBarry Smith pc->ops->applysymmetricleft = PCApplySymmetricLeftOrRight_Jacobi; 4774b9ad928SBarry Smith pc->ops->applysymmetricright = PCApplySymmetricLeftOrRight_Jacobi; 4782fa5cd67SKarl Rupp 4799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)pc,"PCJacobiSetType_C",PCJacobiSetType_Jacobi)); 4809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)pc,"PCJacobiGetType_C",PCJacobiGetType_Jacobi)); 4819566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)pc,"PCJacobiSetUseAbs_C",PCJacobiSetUseAbs_Jacobi)); 4829566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)pc,"PCJacobiGetUseAbs_C",PCJacobiGetUseAbs_Jacobi)); 4839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)pc,"PCJacobiSetFixDiagonal_C",PCJacobiSetFixDiagonal_Jacobi)); 4849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)pc,"PCJacobiGetFixDiagonal_C",PCJacobiGetFixDiagonal_Jacobi)); 4854b9ad928SBarry Smith PetscFunctionReturn(0); 4864b9ad928SBarry Smith } 487cd47f5d9SBarry Smith 488cd47f5d9SBarry Smith /*@ 489cd47f5d9SBarry Smith PCJacobiSetUseAbs - Causes the Jacobi preconditioner to use the 49067ed0f3bSStefano Zampini absolute values of the diagonal divisors in the preconditioner 491cd47f5d9SBarry Smith 492ad4df100SBarry Smith Logically Collective on PC 493cd47f5d9SBarry Smith 494cd47f5d9SBarry Smith Input Parameters: 495baa89ecbSBarry Smith + pc - the preconditioner context 496baa89ecbSBarry Smith - flg - whether to use absolute values or not 497baa89ecbSBarry Smith 498baa89ecbSBarry Smith Options Database Key: 499147403d9SBarry Smith . -pc_jacobi_abs <bool> - use absolute values 500baa89ecbSBarry Smith 50195452b02SPatrick Sanan Notes: 50295452b02SPatrick Sanan This takes affect at the next construction of the preconditioner 503baa89ecbSBarry Smith 504baa89ecbSBarry Smith Level: intermediate 505baa89ecbSBarry Smith 506baa89ecbSBarry Smith .seealso: PCJacobiaSetType(), PCJacobiGetUseAbs() 507baa89ecbSBarry Smith 508baa89ecbSBarry Smith @*/ 509baa89ecbSBarry Smith PetscErrorCode PCJacobiSetUseAbs(PC pc,PetscBool flg) 510baa89ecbSBarry Smith { 511baa89ecbSBarry Smith PetscFunctionBegin; 512baa89ecbSBarry Smith PetscValidHeaderSpecific(pc,PC_CLASSID,1); 513cac4c232SBarry Smith PetscTryMethod(pc,"PCJacobiSetUseAbs_C",(PC,PetscBool),(pc,flg)); 514baa89ecbSBarry Smith PetscFunctionReturn(0); 515baa89ecbSBarry Smith } 516baa89ecbSBarry Smith 517baa89ecbSBarry Smith /*@ 518baa89ecbSBarry Smith PCJacobiGetUseAbs - Determines if the Jacobi preconditioner uses the 51967ed0f3bSStefano Zampini absolute values of the diagonal divisors in the preconditioner 520baa89ecbSBarry Smith 521baa89ecbSBarry Smith Logically Collective on PC 522baa89ecbSBarry Smith 523baa89ecbSBarry Smith Input Parameter: 524cd47f5d9SBarry Smith . pc - the preconditioner context 525cd47f5d9SBarry Smith 526baa89ecbSBarry Smith Output Parameter: 527baa89ecbSBarry Smith . flg - whether to use absolute values or not 528cd47f5d9SBarry Smith 529cd47f5d9SBarry Smith Level: intermediate 530cd47f5d9SBarry Smith 531baa89ecbSBarry Smith .seealso: PCJacobiaSetType(), PCJacobiSetUseAbs(), PCJacobiGetType() 532cd47f5d9SBarry Smith 533cd47f5d9SBarry Smith @*/ 534baa89ecbSBarry Smith PetscErrorCode PCJacobiGetUseAbs(PC pc,PetscBool *flg) 535cd47f5d9SBarry Smith { 536cd47f5d9SBarry Smith PetscFunctionBegin; 5370700a824SBarry Smith PetscValidHeaderSpecific(pc,PC_CLASSID,1); 538cac4c232SBarry Smith PetscUseMethod(pc,"PCJacobiGetUseAbs_C",(PC,PetscBool*),(pc,flg)); 539cd47f5d9SBarry Smith PetscFunctionReturn(0); 540cd47f5d9SBarry Smith } 541cd47f5d9SBarry Smith 5424b9ad928SBarry Smith /*@ 543147403d9SBarry Smith PCJacobiSetFixDiagonal - Check for zero values on the diagonal and replace them with 1.0 54467ed0f3bSStefano Zampini 54567ed0f3bSStefano Zampini Logically Collective on PC 54667ed0f3bSStefano Zampini 54767ed0f3bSStefano Zampini Input Parameters: 54867ed0f3bSStefano Zampini + pc - the preconditioner context 54967ed0f3bSStefano Zampini - flg - the boolean flag 55067ed0f3bSStefano Zampini 55167ed0f3bSStefano Zampini Options Database Key: 552147403d9SBarry Smith . -pc_jacobi_fixdiagonal <bool> - check for zero values on the diagonal 55367ed0f3bSStefano Zampini 55467ed0f3bSStefano Zampini Notes: 55567ed0f3bSStefano Zampini This takes affect at the next construction of the preconditioner 55667ed0f3bSStefano Zampini 55767ed0f3bSStefano Zampini Level: intermediate 55867ed0f3bSStefano Zampini 55967ed0f3bSStefano Zampini .seealso: PCJacobiSetType(), PCJacobiGetFixDiagonal() 56067ed0f3bSStefano Zampini 56167ed0f3bSStefano Zampini @*/ 56267ed0f3bSStefano Zampini PetscErrorCode PCJacobiSetFixDiagonal(PC pc,PetscBool flg) 56367ed0f3bSStefano Zampini { 56467ed0f3bSStefano Zampini PetscFunctionBegin; 56567ed0f3bSStefano Zampini PetscValidHeaderSpecific(pc,PC_CLASSID,1); 566cac4c232SBarry Smith PetscTryMethod(pc,"PCJacobiSetFixDiagonal_C",(PC,PetscBool),(pc,flg)); 56767ed0f3bSStefano Zampini PetscFunctionReturn(0); 56867ed0f3bSStefano Zampini } 56967ed0f3bSStefano Zampini 57067ed0f3bSStefano Zampini /*@ 57167ed0f3bSStefano Zampini PCJacobiGetFixDiagonal - Determines if the Jacobi preconditioner checks for zero diagonal terms 57267ed0f3bSStefano Zampini 57367ed0f3bSStefano Zampini Logically Collective on PC 57467ed0f3bSStefano Zampini 57567ed0f3bSStefano Zampini Input Parameter: 57667ed0f3bSStefano Zampini . pc - the preconditioner context 57767ed0f3bSStefano Zampini 57867ed0f3bSStefano Zampini Output Parameter: 57967ed0f3bSStefano Zampini . flg - the boolean flag 58067ed0f3bSStefano Zampini 58167ed0f3bSStefano Zampini Options Database Key: 58267b8a455SSatish Balay . -pc_jacobi_fixdiagonal <bool> - Fix 0 terms on diagonal by using 1 58367ed0f3bSStefano Zampini 58467ed0f3bSStefano Zampini Level: intermediate 58567ed0f3bSStefano Zampini 58667ed0f3bSStefano Zampini .seealso: PCJacobiSetType(), PCJacobiSetFixDiagonal() 58767ed0f3bSStefano Zampini 58867ed0f3bSStefano Zampini @*/ 58967ed0f3bSStefano Zampini PetscErrorCode PCJacobiGetFixDiagonal(PC pc,PetscBool *flg) 59067ed0f3bSStefano Zampini { 59167ed0f3bSStefano Zampini PetscFunctionBegin; 59267ed0f3bSStefano Zampini PetscValidHeaderSpecific(pc,PC_CLASSID,1); 593cac4c232SBarry Smith PetscUseMethod(pc,"PCJacobiGetFixDiagonal_C",(PC,PetscBool*),(pc,flg)); 59467ed0f3bSStefano Zampini PetscFunctionReturn(0); 59567ed0f3bSStefano Zampini } 59667ed0f3bSStefano Zampini 59767ed0f3bSStefano Zampini /*@ 598baa89ecbSBarry Smith PCJacobiSetType - Causes the Jacobi preconditioner to use either the diagonal, the maximum entry in each row, 599baa89ecbSBarry Smith of the sum of rows entries for the diagonal preconditioner 6004b9ad928SBarry Smith 601ad4df100SBarry Smith Logically Collective on PC 6024b9ad928SBarry Smith 6034b9ad928SBarry Smith Input Parameters: 604baa89ecbSBarry Smith + pc - the preconditioner context 605baa89ecbSBarry Smith - type - PC_JACOBI_DIAGONAL, PC_JACOBI_ROWMAX, PC_JACOBI_ROWSUM 6064b9ad928SBarry Smith 6074b9ad928SBarry Smith Options Database Key: 608147403d9SBarry Smith . -pc_jacobi_type <diagonal,rowmax,rowsum> - the type of diagonal matrix to use for Jacobi 6094b9ad928SBarry Smith 6104b9ad928SBarry Smith Level: intermediate 6114b9ad928SBarry Smith 612baa89ecbSBarry Smith .seealso: PCJacobiaUseAbs(), PCJacobiGetType() 6134b9ad928SBarry Smith @*/ 614baa89ecbSBarry Smith PetscErrorCode PCJacobiSetType(PC pc,PCJacobiType type) 6154b9ad928SBarry Smith { 6164b9ad928SBarry Smith PetscFunctionBegin; 6170700a824SBarry Smith PetscValidHeaderSpecific(pc,PC_CLASSID,1); 618cac4c232SBarry Smith PetscTryMethod(pc,"PCJacobiSetType_C",(PC,PCJacobiType),(pc,type)); 6194b9ad928SBarry Smith PetscFunctionReturn(0); 6204b9ad928SBarry Smith } 6214b9ad928SBarry Smith 62286697f06SMatthew Knepley /*@ 623baa89ecbSBarry Smith PCJacobiGetType - Gets how the diagonal matrix is produced for the preconditioner 62486697f06SMatthew Knepley 625baa89ecbSBarry Smith Not Collective on PC 62686697f06SMatthew Knepley 627baa89ecbSBarry Smith Input Parameter: 62886697f06SMatthew Knepley . pc - the preconditioner context 62986697f06SMatthew Knepley 630baa89ecbSBarry Smith Output Parameter: 631baa89ecbSBarry Smith . type - PC_JACOBI_DIAGONAL, PC_JACOBI_ROWMAX, PC_JACOBI_ROWSUM 63286697f06SMatthew Knepley 63386697f06SMatthew Knepley Level: intermediate 63486697f06SMatthew Knepley 635baa89ecbSBarry Smith .seealso: PCJacobiaUseAbs(), PCJacobiSetType() 63686697f06SMatthew Knepley @*/ 637baa89ecbSBarry Smith PetscErrorCode PCJacobiGetType(PC pc,PCJacobiType *type) 63886697f06SMatthew Knepley { 63986697f06SMatthew Knepley PetscFunctionBegin; 6400700a824SBarry Smith PetscValidHeaderSpecific(pc,PC_CLASSID,1); 641cac4c232SBarry Smith PetscUseMethod(pc,"PCJacobiGetType_C",(PC,PCJacobiType*),(pc,type)); 64286697f06SMatthew Knepley PetscFunctionReturn(0); 64386697f06SMatthew Knepley } 644