1dba47a55SKris Buschelman #define PETSCKSP_DLL 2dba47a55SKris Buschelman 34b9ad928SBarry Smith /* 43f457be1SHong Zhang This file defines a "solve the problem redundantly on each subgroup of processor" preconditioner. 54b9ad928SBarry Smith */ 66356e834SBarry Smith #include "private/pcimpl.h" /*I "petscpc.h" I*/ 74b9ad928SBarry Smith #include "petscksp.h" 84b9ad928SBarry Smith 94b9ad928SBarry Smith typedef struct { 103e065800SHong Zhang KSP ksp; 114b9ad928SBarry Smith PC pc; /* actual preconditioner used on each processor */ 127adad957SLisandro Dalcin Vec xsub,ysub; /* vectors of a subcommunicator to hold parallel vectors of ((PetscObject)pc)->comm */ 133f457be1SHong Zhang Vec xdup,ydup; /* parallel vector that congregates xsub or ysub facilitating vector scattering */ 14b3804887SHong Zhang Mat pmats; /* matrix and optional preconditioner matrix belong to a subcommunicator */ 153f457be1SHong Zhang VecScatter scatterin,scatterout; /* scatter used to move all values to each processor group (subcommunicator) */ 164b9ad928SBarry Smith PetscTruth useparallelmat; 17c540e29cSHong Zhang PetscSubcomm psubcomm; 181fbd8f88SHong Zhang PetscInt nsubcomm; /* num of data structure PetscSubcomm */ 194b9ad928SBarry Smith } PC_Redundant; 204b9ad928SBarry Smith 214b9ad928SBarry Smith #undef __FUNCT__ 224b9ad928SBarry Smith #define __FUNCT__ "PCView_Redundant" 236849ba73SBarry Smith static PetscErrorCode PCView_Redundant(PC pc,PetscViewer viewer) 244b9ad928SBarry Smith { 254b9ad928SBarry Smith PC_Redundant *red = (PC_Redundant*)pc->data; 26dfbe8321SBarry Smith PetscErrorCode ierr; 2713f74950SBarry Smith PetscMPIInt rank; 2832077d6dSBarry Smith PetscTruth iascii,isstring; 29*03ccd0b4SBarry Smith PetscViewer subviewer; 304b9ad928SBarry Smith 314b9ad928SBarry Smith PetscFunctionBegin; 327adad957SLisandro Dalcin ierr = MPI_Comm_rank(((PetscObject)pc)->comm,&rank);CHKERRQ(ierr); 3332077d6dSBarry Smith ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&iascii);CHKERRQ(ierr); 344b9ad928SBarry Smith ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_STRING,&isstring);CHKERRQ(ierr); 3532077d6dSBarry Smith if (iascii) { 36*03ccd0b4SBarry Smith if (!red->psubcomm) { 37*03ccd0b4SBarry Smith ierr = PetscViewerASCIIPrintf(viewer," Redundant preconditioner: Not yet setup\n");CHKERRQ(ierr); 38*03ccd0b4SBarry Smith } else { 393e065800SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Redundant preconditioner: First (color=0) of %D PCs follows\n",red->nsubcomm);CHKERRQ(ierr); 407adad957SLisandro Dalcin ierr = PetscViewerGetSubcomm(viewer,((PetscObject)red->pc)->comm,&subviewer);CHKERRQ(ierr); 41*03ccd0b4SBarry Smith if (red->psubcomm->color) { /* only view first redundant pc */ 424b9ad928SBarry Smith ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 433e065800SHong Zhang ierr = KSPView(red->ksp,subviewer);CHKERRQ(ierr); 444b9ad928SBarry Smith ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 454b9ad928SBarry Smith } 467adad957SLisandro Dalcin ierr = PetscViewerRestoreSubcomm(viewer,((PetscObject)red->pc)->comm,&subviewer);CHKERRQ(ierr); 474b9ad928SBarry Smith } 48*03ccd0b4SBarry Smith } else if (isstring) { 49*03ccd0b4SBarry Smith ierr = PetscViewerStringSPrintf(viewer," Redundant solver preconditioner");CHKERRQ(ierr); 504b9ad928SBarry Smith } else { 5179a5c55eSBarry Smith SETERRQ1(PETSC_ERR_SUP,"Viewer type %s not supported for PC redundant",((PetscObject)viewer)->type_name); 524b9ad928SBarry Smith } 534b9ad928SBarry Smith PetscFunctionReturn(0); 544b9ad928SBarry Smith } 554b9ad928SBarry Smith 567c4f633dSBarry Smith #include "private/matimpl.h" /*I "petscmat.h" I*/ 574b9ad928SBarry Smith #undef __FUNCT__ 584b9ad928SBarry Smith #define __FUNCT__ "PCSetUp_Redundant" 596849ba73SBarry Smith static PetscErrorCode PCSetUp_Redundant(PC pc) 604b9ad928SBarry Smith { 614b9ad928SBarry Smith PC_Redundant *red = (PC_Redundant*)pc->data; 62dfbe8321SBarry Smith PetscErrorCode ierr; 6345fc02eaSBarry Smith PetscInt mstart,mend,mlocal,m,mlocal_sub,rstart_sub,rend_sub,mloc_sub; 6413f74950SBarry Smith PetscMPIInt size; 654b9ad928SBarry Smith MatReuse reuse = MAT_INITIAL_MATRIX; 664b9ad928SBarry Smith MatStructure str = DIFFERENT_NONZERO_PATTERN; 677adad957SLisandro Dalcin MPI_Comm comm = ((PetscObject)pc)->comm,subcomm; 6823ce1328SBarry Smith Vec vec; 693f457be1SHong Zhang PetscMPIInt subsize,subrank; 701fbd8f88SHong Zhang const char *prefix; 713f457be1SHong Zhang 724b9ad928SBarry Smith PetscFunctionBegin; 7323ce1328SBarry Smith ierr = MatGetVecs(pc->pmat,&vec,0);CHKERRQ(ierr); 7423ce1328SBarry Smith ierr = VecGetSize(vec,&m);CHKERRQ(ierr); 751fbd8f88SHong Zhang 764b9ad928SBarry Smith if (!pc->setupcalled) { 775f06b7aaSBarry Smith if (!red->psubcomm) { 781fbd8f88SHong Zhang ierr = PetscSubcommCreate(comm,red->nsubcomm,&red->psubcomm);CHKERRQ(ierr); 791fbd8f88SHong Zhang ierr = PetscLogObjectMemory(pc,sizeof(PetscSubcomm));CHKERRQ(ierr); 801fbd8f88SHong Zhang 811fbd8f88SHong Zhang /* create a new PC that processors in each subcomm have copy of */ 820d7810c8SBarry Smith subcomm = red->psubcomm->comm; 835f06b7aaSBarry Smith ierr = KSPCreate(subcomm,&red->ksp);CHKERRQ(ierr); 845f06b7aaSBarry Smith ierr = PetscObjectIncrementTabLevel((PetscObject)red->ksp,(PetscObject)pc,1);CHKERRQ(ierr); 855f06b7aaSBarry Smith ierr = PetscLogObjectParent(pc,red->ksp);CHKERRQ(ierr); 865f06b7aaSBarry Smith ierr = KSPSetType(red->ksp,KSPPREONLY);CHKERRQ(ierr); 875f06b7aaSBarry Smith ierr = KSPGetPC(red->ksp,&red->pc);CHKERRQ(ierr); 88cf52b8b1SHong Zhang ierr = PCSetType(red->pc,PCLU);CHKERRQ(ierr); 89cf52b8b1SHong Zhang 901fbd8f88SHong Zhang ierr = PCGetOptionsPrefix(pc,&prefix);CHKERRQ(ierr); 915f06b7aaSBarry Smith ierr = KSPSetOptionsPrefix(red->ksp,prefix);CHKERRQ(ierr); 925f06b7aaSBarry Smith ierr = KSPAppendOptionsPrefix(red->ksp,"redundant_");CHKERRQ(ierr); 935f06b7aaSBarry Smith } else { 945f06b7aaSBarry Smith subcomm = red->psubcomm->comm; 955f06b7aaSBarry Smith } 961fbd8f88SHong Zhang 973f457be1SHong Zhang /* create working vectors xsub/ysub and xdup/ydup */ 9823ce1328SBarry Smith ierr = VecGetLocalSize(vec,&mlocal);CHKERRQ(ierr); 993f457be1SHong Zhang ierr = VecGetOwnershipRange(vec,&mstart,&mend);CHKERRQ(ierr); 1004b9ad928SBarry Smith 1013f457be1SHong Zhang /* get local size of xsub/ysub */ 1021fbd8f88SHong Zhang ierr = MPI_Comm_size(subcomm,&subsize);CHKERRQ(ierr); 1031fbd8f88SHong Zhang ierr = MPI_Comm_rank(subcomm,&subrank);CHKERRQ(ierr); 104d0f46423SBarry Smith rstart_sub = pc->pmat->rmap->range[red->psubcomm->n*subrank]; /* rstart in xsub/ysub */ 1053f457be1SHong Zhang if (subrank+1 < subsize){ 106d0f46423SBarry Smith rend_sub = pc->pmat->rmap->range[red->psubcomm->n*(subrank+1)]; 1073f457be1SHong Zhang } else { 1083f457be1SHong Zhang rend_sub = m; 1093f457be1SHong Zhang } 1103f457be1SHong Zhang mloc_sub = rend_sub - rstart_sub; 1111fbd8f88SHong Zhang ierr = VecCreateMPI(subcomm,mloc_sub,PETSC_DECIDE,&red->ysub);CHKERRQ(ierr); 1123f457be1SHong Zhang /* create xsub with empty local arrays, because xdup's arrays will be placed into it */ 1131fbd8f88SHong Zhang ierr = VecCreateMPIWithArray(subcomm,mloc_sub,PETSC_DECIDE,PETSC_NULL,&red->xsub);CHKERRQ(ierr); 1143f457be1SHong Zhang 1153f457be1SHong Zhang /* create xdup and ydup. ydup has empty local arrays because ysub's arrays will be place into it. 1167adad957SLisandro Dalcin Note: we use communicator dupcomm, not ((PetscObject)pc)->comm! */ 1171fbd8f88SHong Zhang ierr = VecCreateMPI(red->psubcomm->dupparent,mloc_sub,PETSC_DECIDE,&red->xdup);CHKERRQ(ierr); 1181fbd8f88SHong Zhang ierr = VecCreateMPIWithArray(red->psubcomm->dupparent,mloc_sub,PETSC_DECIDE,PETSC_NULL,&red->ydup);CHKERRQ(ierr); 1193f457be1SHong Zhang 1203f457be1SHong Zhang /* create vec scatters */ 1213f457be1SHong Zhang if (!red->scatterin){ 1223f457be1SHong Zhang IS is1,is2; 1233f457be1SHong Zhang PetscInt *idx1,*idx2,i,j,k; 12445fc02eaSBarry Smith 1251d79065fSBarry Smith ierr = PetscMalloc2(red->psubcomm->n*mlocal,PetscInt,&idx1,red->psubcomm->n*mlocal,PetscInt,&idx2);CHKERRQ(ierr); 1263f457be1SHong Zhang j = 0; 1271fbd8f88SHong Zhang for (k=0; k<red->psubcomm->n; k++){ 1283f457be1SHong Zhang for (i=mstart; i<mend; i++){ 1293f457be1SHong Zhang idx1[j] = i; 1303f457be1SHong Zhang idx2[j++] = i + m*k; 1313f457be1SHong Zhang } 1323f457be1SHong Zhang } 1331fbd8f88SHong Zhang ierr = ISCreateGeneral(comm,red->psubcomm->n*mlocal,idx1,&is1);CHKERRQ(ierr); 1341fbd8f88SHong Zhang ierr = ISCreateGeneral(comm,red->psubcomm->n*mlocal,idx2,&is2);CHKERRQ(ierr); 1353f457be1SHong Zhang ierr = VecScatterCreate(vec,is1,red->xdup,is2,&red->scatterin);CHKERRQ(ierr); 1363f457be1SHong Zhang ierr = ISDestroy(is1);CHKERRQ(ierr); 1373f457be1SHong Zhang ierr = ISDestroy(is2);CHKERRQ(ierr); 1383f457be1SHong Zhang 1391fbd8f88SHong Zhang ierr = ISCreateStride(comm,mlocal,mstart+ red->psubcomm->color*m,1,&is1);CHKERRQ(ierr); 1403f457be1SHong Zhang ierr = ISCreateStride(comm,mlocal,mstart,1,&is2);CHKERRQ(ierr); 1413f457be1SHong Zhang ierr = VecScatterCreate(red->xdup,is1,vec,is2,&red->scatterout);CHKERRQ(ierr); 1423f457be1SHong Zhang ierr = ISDestroy(is1);CHKERRQ(ierr); 1433f457be1SHong Zhang ierr = ISDestroy(is2);CHKERRQ(ierr); 1441d79065fSBarry Smith ierr = PetscFree2(idx1,idx2);CHKERRQ(ierr); 1454b9ad928SBarry Smith } 1464b9ad928SBarry Smith } 14723ce1328SBarry Smith ierr = VecDestroy(vec);CHKERRQ(ierr); 1484b9ad928SBarry Smith 1494b9ad928SBarry Smith /* if pmatrix set by user is sequential then we do not need to gather the parallel matrix */ 1503f457be1SHong Zhang ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 1514b9ad928SBarry Smith if (size == 1) { 1524b9ad928SBarry Smith red->useparallelmat = PETSC_FALSE; 1534b9ad928SBarry Smith } 1544b9ad928SBarry Smith 1554b9ad928SBarry Smith if (red->useparallelmat) { 1564b9ad928SBarry Smith if (pc->setupcalled == 1 && pc->flag == DIFFERENT_NONZERO_PATTERN) { 1574b9ad928SBarry Smith /* destroy old matrices */ 1584b9ad928SBarry Smith if (red->pmats) { 159b3804887SHong Zhang ierr = MatDestroy(red->pmats);CHKERRQ(ierr); 1604b9ad928SBarry Smith } 1614b9ad928SBarry Smith } else if (pc->setupcalled == 1) { 1624b9ad928SBarry Smith reuse = MAT_REUSE_MATRIX; 1634b9ad928SBarry Smith str = SAME_NONZERO_PATTERN; 1644b9ad928SBarry Smith } 1654b9ad928SBarry Smith 1663f457be1SHong Zhang /* grab the parallel matrix and put it into processors of a subcomminicator */ 167f664ae05SHong Zhang /*--------------------------------------------------------------------------*/ 168f664ae05SHong Zhang ierr = VecGetLocalSize(red->ysub,&mlocal_sub);CHKERRQ(ierr); 16969db28dcSHong Zhang ierr = MatGetRedundantMatrix(pc->pmat,red->psubcomm->n,red->psubcomm->comm,mlocal_sub,reuse,&red->pmats);CHKERRQ(ierr); 1703f457be1SHong Zhang /* tell PC of the subcommunicator its operators */ 17190f1c854SHong Zhang ierr = KSPSetOperators(red->ksp,red->pmats,red->pmats,str);CHKERRQ(ierr); 1724b9ad928SBarry Smith } else { 17390f1c854SHong Zhang ierr = KSPSetOperators(red->ksp,pc->mat,pc->pmat,pc->flag);CHKERRQ(ierr); 1744b9ad928SBarry Smith } 1750c24e6a1SHong Zhang if (pc->setfromoptionscalled){ 1763e065800SHong Zhang ierr = KSPSetFromOptions(red->ksp);CHKERRQ(ierr); 1770c24e6a1SHong Zhang } 1783e065800SHong Zhang ierr = KSPSetUp(red->ksp);CHKERRQ(ierr); 1794b9ad928SBarry Smith PetscFunctionReturn(0); 1804b9ad928SBarry Smith } 1814b9ad928SBarry Smith 1824b9ad928SBarry Smith #undef __FUNCT__ 1834b9ad928SBarry Smith #define __FUNCT__ "PCApply_Redundant" 1846849ba73SBarry Smith static PetscErrorCode PCApply_Redundant(PC pc,Vec x,Vec y) 1854b9ad928SBarry Smith { 1864b9ad928SBarry Smith PC_Redundant *red = (PC_Redundant*)pc->data; 187dfbe8321SBarry Smith PetscErrorCode ierr; 1883f457be1SHong Zhang PetscScalar *array; 1894b9ad928SBarry Smith 1904b9ad928SBarry Smith PetscFunctionBegin; 1913f457be1SHong Zhang /* scatter x to xdup */ 192ca9f406cSSatish Balay ierr = VecScatterBegin(red->scatterin,x,red->xdup,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 193ca9f406cSSatish Balay ierr = VecScatterEnd(red->scatterin,x,red->xdup,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1943f457be1SHong Zhang 1953f457be1SHong Zhang /* place xdup's local array into xsub */ 1963f457be1SHong Zhang ierr = VecGetArray(red->xdup,&array);CHKERRQ(ierr); 1973f457be1SHong Zhang ierr = VecPlaceArray(red->xsub,(const PetscScalar*)array);CHKERRQ(ierr); 1984b9ad928SBarry Smith 1994b9ad928SBarry Smith /* apply preconditioner on each processor */ 2003f457be1SHong Zhang ierr = PCApply(red->pc,red->xsub,red->ysub);CHKERRQ(ierr); 2013f457be1SHong Zhang ierr = VecResetArray(red->xsub);CHKERRQ(ierr); 2023f457be1SHong Zhang ierr = VecRestoreArray(red->xdup,&array);CHKERRQ(ierr); 2034b9ad928SBarry Smith 2043f457be1SHong Zhang /* place ysub's local array into ydup */ 2053f457be1SHong Zhang ierr = VecGetArray(red->ysub,&array);CHKERRQ(ierr); 2063f457be1SHong Zhang ierr = VecPlaceArray(red->ydup,(const PetscScalar*)array);CHKERRQ(ierr); 2073f457be1SHong Zhang 2083f457be1SHong Zhang /* scatter ydup to y */ 209ca9f406cSSatish Balay ierr = VecScatterBegin(red->scatterout,red->ydup,y,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 210ca9f406cSSatish Balay ierr = VecScatterEnd(red->scatterout,red->ydup,y,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 2113f457be1SHong Zhang ierr = VecResetArray(red->ydup);CHKERRQ(ierr); 2123f457be1SHong Zhang ierr = VecRestoreArray(red->ysub,&array);CHKERRQ(ierr); 2134b9ad928SBarry Smith PetscFunctionReturn(0); 2144b9ad928SBarry Smith } 2154b9ad928SBarry Smith 2164b9ad928SBarry Smith #undef __FUNCT__ 2174b9ad928SBarry Smith #define __FUNCT__ "PCDestroy_Redundant" 2186849ba73SBarry Smith static PetscErrorCode PCDestroy_Redundant(PC pc) 2194b9ad928SBarry Smith { 2204b9ad928SBarry Smith PC_Redundant *red = (PC_Redundant*)pc->data; 221dfbe8321SBarry Smith PetscErrorCode ierr; 2224b9ad928SBarry Smith 2234b9ad928SBarry Smith PetscFunctionBegin; 2244b9ad928SBarry Smith if (red->scatterin) {ierr = VecScatterDestroy(red->scatterin);CHKERRQ(ierr);} 2254b9ad928SBarry Smith if (red->scatterout) {ierr = VecScatterDestroy(red->scatterout);CHKERRQ(ierr);} 2263f457be1SHong Zhang if (red->ysub) {ierr = VecDestroy(red->ysub);CHKERRQ(ierr);} 2273f457be1SHong Zhang if (red->xsub) {ierr = VecDestroy(red->xsub);CHKERRQ(ierr);} 2283f457be1SHong Zhang if (red->xdup) {ierr = VecDestroy(red->xdup);CHKERRQ(ierr);} 2293f457be1SHong Zhang if (red->ydup) {ierr = VecDestroy(red->ydup);CHKERRQ(ierr);} 230b3804887SHong Zhang if (red->pmats) { 231b3804887SHong Zhang ierr = MatDestroy(red->pmats);CHKERRQ(ierr); 2323f457be1SHong Zhang } 233e5a9bf91SBarry Smith if (red->psubcomm) {ierr = PetscSubcommDestroy(red->psubcomm);CHKERRQ(ierr);} 2343e065800SHong Zhang if (red->ksp) {ierr = KSPDestroy(red->ksp);CHKERRQ(ierr);} 2354b9ad928SBarry Smith ierr = PetscFree(red);CHKERRQ(ierr); 2364b9ad928SBarry Smith PetscFunctionReturn(0); 2374b9ad928SBarry Smith } 2384b9ad928SBarry Smith 2394b9ad928SBarry Smith #undef __FUNCT__ 2404b9ad928SBarry Smith #define __FUNCT__ "PCSetFromOptions_Redundant" 2416849ba73SBarry Smith static PetscErrorCode PCSetFromOptions_Redundant(PC pc) 2424b9ad928SBarry Smith { 243a98ce0f4SHong Zhang PetscErrorCode ierr; 244a98ce0f4SHong Zhang PC_Redundant *red = (PC_Redundant*)pc->data; 245a98ce0f4SHong Zhang 2464b9ad928SBarry Smith PetscFunctionBegin; 247a98ce0f4SHong Zhang ierr = PetscOptionsHead("Redundant options");CHKERRQ(ierr); 24809a6bc64SHong Zhang ierr = PetscOptionsInt("-pc_redundant_number","Number of redundant pc","PCRedundantSetNumber",red->nsubcomm,&red->nsubcomm,0);CHKERRQ(ierr); 249a98ce0f4SHong Zhang ierr = PetscOptionsTail();CHKERRQ(ierr); 2504b9ad928SBarry Smith PetscFunctionReturn(0); 2514b9ad928SBarry Smith } 2524b9ad928SBarry Smith 2534b9ad928SBarry Smith EXTERN_C_BEGIN 2544b9ad928SBarry Smith #undef __FUNCT__ 25509a6bc64SHong Zhang #define __FUNCT__ "PCRedundantSetNumber_Redundant" 25609a6bc64SHong Zhang PetscErrorCode PETSCKSP_DLLEXPORT PCRedundantSetNumber_Redundant(PC pc,PetscInt nreds) 25709a6bc64SHong Zhang { 25809a6bc64SHong Zhang PC_Redundant *red = (PC_Redundant*)pc->data; 25909a6bc64SHong Zhang 26009a6bc64SHong Zhang PetscFunctionBegin; 26109a6bc64SHong Zhang red->nsubcomm = nreds; 26209a6bc64SHong Zhang PetscFunctionReturn(0); 26309a6bc64SHong Zhang } 26409a6bc64SHong Zhang EXTERN_C_END 26509a6bc64SHong Zhang 26609a6bc64SHong Zhang #undef __FUNCT__ 26709a6bc64SHong Zhang #define __FUNCT__ "PCRedundantSetNumber" 26809a6bc64SHong Zhang /*@ 26909a6bc64SHong Zhang PCRedundantSetNumber - Sets the number of redundant preconditioner contexts. 27009a6bc64SHong Zhang 27109a6bc64SHong Zhang Collective on PC 27209a6bc64SHong Zhang 27309a6bc64SHong Zhang Input Parameters: 27409a6bc64SHong Zhang + pc - the preconditioner context 2759b21d695SBarry Smith - nredundant - number of redundant preconditioner contexts; for example if you are using 64 MPI processes and 2769b21d695SBarry Smith use an nredundant of 4 there will be 4 parallel solves each on 16 = 64/4 processes. 27709a6bc64SHong Zhang 27809a6bc64SHong Zhang Level: advanced 27909a6bc64SHong Zhang 28009a6bc64SHong Zhang .keywords: PC, redundant solve 28109a6bc64SHong Zhang @*/ 28209a6bc64SHong Zhang PetscErrorCode PETSCKSP_DLLEXPORT PCRedundantSetNumber(PC pc,PetscInt nredundant) 28309a6bc64SHong Zhang { 28409a6bc64SHong Zhang PetscErrorCode ierr,(*f)(PC,PetscInt); 28509a6bc64SHong Zhang 28609a6bc64SHong Zhang PetscFunctionBegin; 28709a6bc64SHong Zhang PetscValidHeaderSpecific(pc,PC_COOKIE,1); 28809a6bc64SHong Zhang if (nredundant <= 0) SETERRQ1(PETSC_ERR_ARG_WRONG, "num of redundant pc %D must be positive",nredundant); 28909a6bc64SHong Zhang ierr = PetscObjectQueryFunction((PetscObject)pc,"PCRedundantSetNumber_C",(void (**)(void))&f);CHKERRQ(ierr); 29009a6bc64SHong Zhang if (f) { 29109a6bc64SHong Zhang ierr = (*f)(pc,nredundant);CHKERRQ(ierr); 29209a6bc64SHong Zhang } 29309a6bc64SHong Zhang PetscFunctionReturn(0); 29409a6bc64SHong Zhang } 29509a6bc64SHong Zhang 29609a6bc64SHong Zhang EXTERN_C_BEGIN 29709a6bc64SHong Zhang #undef __FUNCT__ 2984b9ad928SBarry Smith #define __FUNCT__ "PCRedundantSetScatter_Redundant" 299dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCRedundantSetScatter_Redundant(PC pc,VecScatter in,VecScatter out) 3004b9ad928SBarry Smith { 3014b9ad928SBarry Smith PC_Redundant *red = (PC_Redundant*)pc->data; 302dfbe8321SBarry Smith PetscErrorCode ierr; 3034b9ad928SBarry Smith 3044b9ad928SBarry Smith PetscFunctionBegin; 3054b9ad928SBarry Smith ierr = PetscObjectReference((PetscObject)in);CHKERRQ(ierr); 306c3122656SLisandro Dalcin if (red->scatterin) { ierr = VecScatterDestroy(red->scatterin);CHKERRQ(ierr); } 307c3122656SLisandro Dalcin red->scatterin = in; 3084b9ad928SBarry Smith ierr = PetscObjectReference((PetscObject)out);CHKERRQ(ierr); 309c3122656SLisandro Dalcin if (red->scatterout) { ierr = VecScatterDestroy(red->scatterout);CHKERRQ(ierr); } 310c3122656SLisandro Dalcin red->scatterout = out; 3114b9ad928SBarry Smith PetscFunctionReturn(0); 3124b9ad928SBarry Smith } 3134b9ad928SBarry Smith EXTERN_C_END 3144b9ad928SBarry Smith 3154b9ad928SBarry Smith #undef __FUNCT__ 3164b9ad928SBarry Smith #define __FUNCT__ "PCRedundantSetScatter" 3174b9ad928SBarry Smith /*@ 3184b9ad928SBarry Smith PCRedundantSetScatter - Sets the scatter used to copy values into the 3194b9ad928SBarry Smith redundant local solve and the scatter to move them back into the global 3204b9ad928SBarry Smith vector. 3214b9ad928SBarry Smith 3224b9ad928SBarry Smith Collective on PC 3234b9ad928SBarry Smith 3244b9ad928SBarry Smith Input Parameters: 3254b9ad928SBarry Smith + pc - the preconditioner context 3264b9ad928SBarry Smith . in - the scatter to move the values in 3274b9ad928SBarry Smith - out - the scatter to move them out 3284b9ad928SBarry Smith 3294b9ad928SBarry Smith Level: advanced 3304b9ad928SBarry Smith 3314b9ad928SBarry Smith .keywords: PC, redundant solve 3324b9ad928SBarry Smith @*/ 333dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCRedundantSetScatter(PC pc,VecScatter in,VecScatter out) 3344b9ad928SBarry Smith { 335dfbe8321SBarry Smith PetscErrorCode ierr,(*f)(PC,VecScatter,VecScatter); 3364b9ad928SBarry Smith 3374b9ad928SBarry Smith PetscFunctionBegin; 3384482741eSBarry Smith PetscValidHeaderSpecific(pc,PC_COOKIE,1); 3394482741eSBarry Smith PetscValidHeaderSpecific(in,VEC_SCATTER_COOKIE,2); 3404482741eSBarry Smith PetscValidHeaderSpecific(out,VEC_SCATTER_COOKIE,3); 3414b9ad928SBarry Smith ierr = PetscObjectQueryFunction((PetscObject)pc,"PCRedundantSetScatter_C",(void (**)(void))&f);CHKERRQ(ierr); 3424b9ad928SBarry Smith if (f) { 3434b9ad928SBarry Smith ierr = (*f)(pc,in,out);CHKERRQ(ierr); 3444b9ad928SBarry Smith } 3454b9ad928SBarry Smith PetscFunctionReturn(0); 3464b9ad928SBarry Smith } 3474b9ad928SBarry Smith 3484b9ad928SBarry Smith EXTERN_C_BEGIN 3494b9ad928SBarry Smith #undef __FUNCT__ 3504b9ad928SBarry Smith #define __FUNCT__ "PCRedundantGetPC_Redundant" 351dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCRedundantGetPC_Redundant(PC pc,PC *innerpc) 3524b9ad928SBarry Smith { 3535f06b7aaSBarry Smith PetscErrorCode ierr; 3544b9ad928SBarry Smith PC_Redundant *red = (PC_Redundant*)pc->data; 3555f06b7aaSBarry Smith MPI_Comm comm,subcomm; 3565f06b7aaSBarry Smith const char *prefix; 3574b9ad928SBarry Smith 3584b9ad928SBarry Smith PetscFunctionBegin; 3595f06b7aaSBarry Smith if (!red->psubcomm) { 3605f06b7aaSBarry Smith ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr); 3615f06b7aaSBarry Smith ierr = PetscSubcommCreate(comm,red->nsubcomm,&red->psubcomm);CHKERRQ(ierr); 3625f06b7aaSBarry Smith ierr = PetscLogObjectMemory(pc,sizeof(PetscSubcomm));CHKERRQ(ierr); 3635f06b7aaSBarry Smith 3645f06b7aaSBarry Smith /* create a new PC that processors in each subcomm have copy of */ 3655f06b7aaSBarry Smith subcomm = red->psubcomm->comm; 3665f06b7aaSBarry Smith ierr = KSPCreate(subcomm,&red->ksp);CHKERRQ(ierr); 3675f06b7aaSBarry Smith ierr = PetscObjectIncrementTabLevel((PetscObject)red->ksp,(PetscObject)pc,1);CHKERRQ(ierr); 3685f06b7aaSBarry Smith ierr = PetscLogObjectParent(pc,red->ksp);CHKERRQ(ierr); 3695f06b7aaSBarry Smith ierr = KSPSetType(red->ksp,KSPPREONLY);CHKERRQ(ierr); 3705f06b7aaSBarry Smith ierr = KSPGetPC(red->ksp,&red->pc);CHKERRQ(ierr); 3715f06b7aaSBarry Smith ierr = PCSetType(red->pc,PCLU);CHKERRQ(ierr); 3725f06b7aaSBarry Smith 3735f06b7aaSBarry Smith ierr = PCGetOptionsPrefix(pc,&prefix);CHKERRQ(ierr); 3745f06b7aaSBarry Smith ierr = KSPSetOptionsPrefix(red->ksp,prefix);CHKERRQ(ierr); 3755f06b7aaSBarry Smith ierr = KSPAppendOptionsPrefix(red->ksp,"redundant_");CHKERRQ(ierr); 3765f06b7aaSBarry Smith } 3775f06b7aaSBarry Smith 3785f06b7aaSBarry Smith ierr = KSPGetPC(red->ksp,innerpc);CHKERRQ(ierr); 3794b9ad928SBarry Smith PetscFunctionReturn(0); 3804b9ad928SBarry Smith } 3814b9ad928SBarry Smith EXTERN_C_END 3824b9ad928SBarry Smith 3834b9ad928SBarry Smith #undef __FUNCT__ 3844b9ad928SBarry Smith #define __FUNCT__ "PCRedundantGetPC" 3854b9ad928SBarry Smith /*@ 3864b9ad928SBarry Smith PCRedundantGetPC - Gets the sequential PC created by the redundant PC. 3874b9ad928SBarry Smith 3884b9ad928SBarry Smith Not Collective 3894b9ad928SBarry Smith 3904b9ad928SBarry Smith Input Parameter: 3914b9ad928SBarry Smith . pc - the preconditioner context 3924b9ad928SBarry Smith 3934b9ad928SBarry Smith Output Parameter: 3944b9ad928SBarry Smith . innerpc - the sequential PC 3954b9ad928SBarry Smith 3964b9ad928SBarry Smith Level: advanced 3974b9ad928SBarry Smith 3984b9ad928SBarry Smith .keywords: PC, redundant solve 3994b9ad928SBarry Smith @*/ 400dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCRedundantGetPC(PC pc,PC *innerpc) 4014b9ad928SBarry Smith { 402dfbe8321SBarry Smith PetscErrorCode ierr,(*f)(PC,PC*); 4034b9ad928SBarry Smith 4044b9ad928SBarry Smith PetscFunctionBegin; 4054482741eSBarry Smith PetscValidHeaderSpecific(pc,PC_COOKIE,1); 4064482741eSBarry Smith PetscValidPointer(innerpc,2); 4074b9ad928SBarry Smith ierr = PetscObjectQueryFunction((PetscObject)pc,"PCRedundantGetPC_C",(void (**)(void))&f);CHKERRQ(ierr); 4084b9ad928SBarry Smith if (f) { 4094b9ad928SBarry Smith ierr = (*f)(pc,innerpc);CHKERRQ(ierr); 4104b9ad928SBarry Smith } 4114b9ad928SBarry Smith PetscFunctionReturn(0); 4124b9ad928SBarry Smith } 4134b9ad928SBarry Smith 4144b9ad928SBarry Smith EXTERN_C_BEGIN 4154b9ad928SBarry Smith #undef __FUNCT__ 4164b9ad928SBarry Smith #define __FUNCT__ "PCRedundantGetOperators_Redundant" 417dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCRedundantGetOperators_Redundant(PC pc,Mat *mat,Mat *pmat) 4184b9ad928SBarry Smith { 4194b9ad928SBarry Smith PC_Redundant *red = (PC_Redundant*)pc->data; 4204b9ad928SBarry Smith 4214b9ad928SBarry Smith PetscFunctionBegin; 422b3804887SHong Zhang if (mat) *mat = red->pmats; 423b3804887SHong Zhang if (pmat) *pmat = red->pmats; 4244b9ad928SBarry Smith PetscFunctionReturn(0); 4254b9ad928SBarry Smith } 4264b9ad928SBarry Smith EXTERN_C_END 4274b9ad928SBarry Smith 4284b9ad928SBarry Smith #undef __FUNCT__ 4294b9ad928SBarry Smith #define __FUNCT__ "PCRedundantGetOperators" 4304b9ad928SBarry Smith /*@ 4314b9ad928SBarry Smith PCRedundantGetOperators - gets the sequential matrix and preconditioner matrix 4324b9ad928SBarry Smith 4334b9ad928SBarry Smith Not Collective 4344b9ad928SBarry Smith 4354b9ad928SBarry Smith Input Parameter: 4364b9ad928SBarry Smith . pc - the preconditioner context 4374b9ad928SBarry Smith 4384b9ad928SBarry Smith Output Parameters: 4394b9ad928SBarry Smith + mat - the matrix 4404b9ad928SBarry Smith - pmat - the (possibly different) preconditioner matrix 4414b9ad928SBarry Smith 4424b9ad928SBarry Smith Level: advanced 4434b9ad928SBarry Smith 4444b9ad928SBarry Smith .keywords: PC, redundant solve 4454b9ad928SBarry Smith @*/ 446dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCRedundantGetOperators(PC pc,Mat *mat,Mat *pmat) 4474b9ad928SBarry Smith { 448dfbe8321SBarry Smith PetscErrorCode ierr,(*f)(PC,Mat*,Mat*); 4494b9ad928SBarry Smith 4504b9ad928SBarry Smith PetscFunctionBegin; 4514482741eSBarry Smith PetscValidHeaderSpecific(pc,PC_COOKIE,1); 4524482741eSBarry Smith if (mat) PetscValidPointer(mat,2); 4534482741eSBarry Smith if (pmat) PetscValidPointer(pmat,3); 4544b9ad928SBarry Smith ierr = PetscObjectQueryFunction((PetscObject)pc,"PCRedundantGetOperators_C",(void (**)(void))&f);CHKERRQ(ierr); 4554b9ad928SBarry Smith if (f) { 4564b9ad928SBarry Smith ierr = (*f)(pc,mat,pmat);CHKERRQ(ierr); 4574b9ad928SBarry Smith } 4584b9ad928SBarry Smith PetscFunctionReturn(0); 4594b9ad928SBarry Smith } 4604b9ad928SBarry Smith 4614b9ad928SBarry Smith /* -------------------------------------------------------------------------------------*/ 46237a17b4dSBarry Smith /*MC 463a98ce0f4SHong Zhang PCREDUNDANT - Runs a preconditioner for the entire problem on subgroups of processors 46437a17b4dSBarry Smith 46537a17b4dSBarry Smith Options for the redundant preconditioners can be set with -redundant_pc_xxx 46637a17b4dSBarry Smith 46709391456SBarry Smith Options Database: 4689b21d695SBarry Smith . -pc_redundant_number <n> - number of redundant solves, for example if you are using 64 MPI processes and 4699b21d695SBarry Smith use an n of 4 there will be 4 parallel solves each on 16 = 64/4 processes. 47009391456SBarry Smith 47137a17b4dSBarry Smith Level: intermediate 47237a17b4dSBarry Smith 47337a17b4dSBarry Smith .seealso: PCCreate(), PCSetType(), PCType (for list of available types), PCRedundantSetScatter(), 4749b21d695SBarry Smith PCRedundantGetPC(), PCRedundantGetOperators(), PCRedundantSetNumber() 47537a17b4dSBarry Smith M*/ 47637a17b4dSBarry Smith 4774b9ad928SBarry Smith EXTERN_C_BEGIN 4784b9ad928SBarry Smith #undef __FUNCT__ 4794b9ad928SBarry Smith #define __FUNCT__ "PCCreate_Redundant" 480dba47a55SKris Buschelman PetscErrorCode PETSCKSP_DLLEXPORT PCCreate_Redundant(PC pc) 4814b9ad928SBarry Smith { 482dfbe8321SBarry Smith PetscErrorCode ierr; 4834b9ad928SBarry Smith PC_Redundant *red; 48469db28dcSHong Zhang PetscMPIInt size; 4853f457be1SHong Zhang 4864b9ad928SBarry Smith PetscFunctionBegin; 48738f2d2fdSLisandro Dalcin ierr = PetscNewLog(pc,PC_Redundant,&red);CHKERRQ(ierr); 4887adad957SLisandro Dalcin ierr = MPI_Comm_size(((PetscObject)pc)->comm,&size);CHKERRQ(ierr); 48969db28dcSHong Zhang red->nsubcomm = size; 4904b9ad928SBarry Smith red->useparallelmat = PETSC_TRUE; 4911fbd8f88SHong Zhang pc->data = (void*)red; 4924b9ad928SBarry Smith 4934b9ad928SBarry Smith pc->ops->apply = PCApply_Redundant; 4944b9ad928SBarry Smith pc->ops->applytranspose = 0; 4954b9ad928SBarry Smith pc->ops->setup = PCSetUp_Redundant; 4964b9ad928SBarry Smith pc->ops->destroy = PCDestroy_Redundant; 4974b9ad928SBarry Smith pc->ops->setfromoptions = PCSetFromOptions_Redundant; 4984b9ad928SBarry Smith pc->ops->view = PCView_Redundant; 4994b9ad928SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCRedundantSetScatter_C","PCRedundantSetScatter_Redundant", 5004b9ad928SBarry Smith PCRedundantSetScatter_Redundant);CHKERRQ(ierr); 50109a6bc64SHong Zhang ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCRedundantSetNumber_C","PCRedundantSetNumber_Redundant", 50209a6bc64SHong Zhang PCRedundantSetNumber_Redundant);CHKERRQ(ierr); 5034b9ad928SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCRedundantGetPC_C","PCRedundantGetPC_Redundant", 5044b9ad928SBarry Smith PCRedundantGetPC_Redundant);CHKERRQ(ierr); 5054b9ad928SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)pc,"PCRedundantGetOperators_C","PCRedundantGetOperators_Redundant", 5064b9ad928SBarry Smith PCRedundantGetOperators_Redundant);CHKERRQ(ierr); 5074b9ad928SBarry Smith PetscFunctionReturn(0); 5084b9ad928SBarry Smith } 5094b9ad928SBarry Smith EXTERN_C_END 510