xref: /petsc/src/ksp/pc/impls/telescope/telescope_dmda.c (revision 28323a89dc0d365125ef8fdf13aac4a188ea9ceb)
11e07b27eSBarry Smith 
2120bdd93SDave May 
3120bdd93SDave May #include <petsc/private/matimpl.h>
41e07b27eSBarry Smith #include <petsc/private/pcimpl.h>
55e897e82SDave May #include <petsc/private/dmimpl.h>
61e07b27eSBarry Smith #include <petscksp.h>           /*I "petscksp.h" I*/
71e07b27eSBarry Smith #include <petscdm.h>
81e07b27eSBarry Smith #include <petscdmda.h>
91e07b27eSBarry Smith 
101e07b27eSBarry Smith #include "telescope.h"
111e07b27eSBarry Smith 
121e07b27eSBarry Smith #undef __FUNCT__
131e07b27eSBarry Smith #define __FUNCT__ "_DMDADetermineRankFromGlobalIJK"
141e07b27eSBarry Smith PetscErrorCode _DMDADetermineRankFromGlobalIJK(PetscInt dim,PetscInt i,PetscInt j,PetscInt k,
151e07b27eSBarry Smith                                                PetscInt Mp,PetscInt Np,PetscInt Pp,
161e07b27eSBarry Smith                                                PetscInt start_i[],PetscInt start_j[],PetscInt start_k[],
171e07b27eSBarry Smith                                                PetscInt span_i[],PetscInt span_j[],PetscInt span_k[],
181e07b27eSBarry Smith                                                PetscMPIInt *_pi,PetscMPIInt *_pj,PetscMPIInt *_pk,PetscMPIInt *rank_re)
191e07b27eSBarry Smith {
201e07b27eSBarry Smith   PetscInt pi,pj,pk,n;
211e07b27eSBarry Smith 
221e07b27eSBarry Smith   PetscFunctionBegin;
231e07b27eSBarry Smith   pi = pj = pk = -1;
241e07b27eSBarry Smith   if (_pi) {
251e07b27eSBarry Smith     for (n=0; n<Mp; n++) {
261e07b27eSBarry Smith       if ( (i >= start_i[n]) && (i < start_i[n]+span_i[n]) ) {
271e07b27eSBarry Smith         pi = n;
281e07b27eSBarry Smith         break;
291e07b27eSBarry Smith       }
301e07b27eSBarry Smith     }
311e07b27eSBarry Smith     if (pi == -1) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmda-ijk] pi cannot be determined : range %D, val %D",Mp,i);
321e07b27eSBarry Smith     *_pi = pi;
331e07b27eSBarry Smith   }
341e07b27eSBarry Smith 
351e07b27eSBarry Smith   if (_pj) {
361e07b27eSBarry Smith     for (n=0; n<Np; n++) {
371e07b27eSBarry Smith       if ( (j >= start_j[n]) && (j < start_j[n]+span_j[n]) ) {
381e07b27eSBarry Smith         pj = n;
391e07b27eSBarry Smith         break;
401e07b27eSBarry Smith       }
411e07b27eSBarry Smith     }
421e07b27eSBarry Smith     if (pj == -1) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmda-ijk] pj cannot be determined : range %D, val %D",Np,j);
431e07b27eSBarry Smith     *_pj = pj;
441e07b27eSBarry Smith   }
451e07b27eSBarry Smith 
461e07b27eSBarry Smith   if (_pk) {
471e07b27eSBarry Smith     for (n=0; n<Pp; n++) {
481e07b27eSBarry Smith       if ( (k >= start_k[n]) && (k < start_k[n]+span_k[n]) ) {
491e07b27eSBarry Smith         pk = n;
501e07b27eSBarry Smith         break;
511e07b27eSBarry Smith       }
521e07b27eSBarry Smith     }
531e07b27eSBarry Smith     if (pk == -1) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmda-ijk] pk cannot be determined : range %D, val %D",Pp,k);
541e07b27eSBarry Smith     *_pk = pk;
551e07b27eSBarry Smith   }
561e07b27eSBarry Smith 
571e07b27eSBarry Smith   switch (dim) {
581e07b27eSBarry Smith     case 1:
591e07b27eSBarry Smith       *rank_re = pi;
601e07b27eSBarry Smith       break;
611e07b27eSBarry Smith     case 2:
621e07b27eSBarry Smith       *rank_re = pi + pj * Mp;
631e07b27eSBarry Smith       break;
641e07b27eSBarry Smith     case 3:
651e07b27eSBarry Smith       *rank_re = pi + pj * Mp + pk * (Mp*Np);
661e07b27eSBarry Smith       break;
671e07b27eSBarry Smith   }
681e07b27eSBarry Smith   PetscFunctionReturn(0);
691e07b27eSBarry Smith }
701e07b27eSBarry Smith 
711e07b27eSBarry Smith #undef __FUNCT__
721e07b27eSBarry Smith #define __FUNCT__ "_DMDADetermineGlobalS0"
731e07b27eSBarry Smith PetscErrorCode _DMDADetermineGlobalS0(PetscInt dim,PetscMPIInt rank_re,PetscInt Mp_re,PetscInt Np_re,PetscInt Pp_re,
741e07b27eSBarry Smith                                       PetscInt range_i_re[],PetscInt range_j_re[],PetscInt range_k_re[],PetscInt *s0)
751e07b27eSBarry Smith {
76c6a0d831SBarry Smith   PetscInt i,j,k,start_IJK = 0;
771e07b27eSBarry Smith   PetscInt rank_ijk;
781e07b27eSBarry Smith 
791e07b27eSBarry Smith   PetscFunctionBegin;
801e07b27eSBarry Smith   switch (dim) {
811e07b27eSBarry Smith     case 1:
821e07b27eSBarry Smith       for (i=0; i<Mp_re; i++) {
831e07b27eSBarry Smith         rank_ijk = i;
841e07b27eSBarry Smith         if (rank_ijk < rank_re) {
851e07b27eSBarry Smith           start_IJK += range_i_re[i];
861e07b27eSBarry Smith         }
871e07b27eSBarry Smith       }
881e07b27eSBarry Smith       break;
891e07b27eSBarry Smith     case 2:
901e07b27eSBarry Smith       for (j=0; j<Np_re; j++) {
911e07b27eSBarry Smith         for (i=0; i<Mp_re; i++) {
921e07b27eSBarry Smith           rank_ijk = i + j*Mp_re;
931e07b27eSBarry Smith           if (rank_ijk < rank_re) {
941e07b27eSBarry Smith             start_IJK += range_i_re[i]*range_j_re[j];
951e07b27eSBarry Smith           }
961e07b27eSBarry Smith         }
971e07b27eSBarry Smith       }
981e07b27eSBarry Smith       break;
991e07b27eSBarry Smith     case 3:
1001e07b27eSBarry Smith       for (k=0; k<Pp_re; k++) {
1011e07b27eSBarry Smith         for (j=0; j<Np_re; j++) {
1021e07b27eSBarry Smith           for (i=0; i<Mp_re; i++) {
1031e07b27eSBarry Smith             rank_ijk = i + j*Mp_re + k*Mp_re*Np_re;
1041e07b27eSBarry Smith             if (rank_ijk < rank_re) {
1051e07b27eSBarry Smith               start_IJK += range_i_re[i]*range_j_re[j]*range_k_re[k];
1061e07b27eSBarry Smith             }
1071e07b27eSBarry Smith           }
1081e07b27eSBarry Smith         }
1091e07b27eSBarry Smith       }
1101e07b27eSBarry Smith       break;
1111e07b27eSBarry Smith   }
1121e07b27eSBarry Smith   *s0 = start_IJK;
1131e07b27eSBarry Smith   PetscFunctionReturn(0);
1141e07b27eSBarry Smith }
1151e07b27eSBarry Smith 
1161e07b27eSBarry Smith #undef __FUNCT__
1171e07b27eSBarry Smith #define __FUNCT__ "PCTelescopeSetUp_dmda_repart_coors2d"
1181e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda_repart_coors2d(PetscSubcomm psubcomm,DM dm,DM subdm)
1191e07b27eSBarry Smith {
1201e07b27eSBarry Smith   PetscErrorCode ierr;
1211e07b27eSBarry Smith   DM             cdm;
1221e07b27eSBarry Smith   Vec            coor,coor_natural,perm_coors;
1231e07b27eSBarry Smith   PetscInt       i,j,si,sj,ni,nj,M,N,Ml,Nl,c,nidx;
1241e07b27eSBarry Smith   PetscInt       *fine_indices;
1251e07b27eSBarry Smith   IS             is_fine,is_local;
1261e07b27eSBarry Smith   VecScatter     sctx;
1271e07b27eSBarry Smith 
1281e07b27eSBarry Smith   PetscFunctionBegin;
1291e07b27eSBarry Smith   ierr = DMGetCoordinates(dm,&coor);CHKERRQ(ierr);
1301e07b27eSBarry Smith   if (!coor) return(0);
1311e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
1321e07b27eSBarry Smith     ierr = DMDASetUniformCoordinates(subdm,0.0,1.0,0.0,1.0,0.0,1.0);CHKERRQ(ierr);
1331e07b27eSBarry Smith   }
1341e07b27eSBarry Smith   /* Get the coordinate vector from the distributed array */
1351e07b27eSBarry Smith   ierr = DMGetCoordinateDM(dm,&cdm);CHKERRQ(ierr);
1361e07b27eSBarry Smith   ierr = DMDACreateNaturalVector(cdm,&coor_natural);CHKERRQ(ierr);
1371e07b27eSBarry Smith 
1381e07b27eSBarry Smith   ierr = DMDAGlobalToNaturalBegin(cdm,coor,INSERT_VALUES,coor_natural);CHKERRQ(ierr);
1391e07b27eSBarry Smith   ierr = DMDAGlobalToNaturalEnd(cdm,coor,INSERT_VALUES,coor_natural);CHKERRQ(ierr);
1401e07b27eSBarry Smith 
1411e07b27eSBarry Smith   /* get indices of the guys I want to grab */
1421e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,NULL,&M,&N,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
1431e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
1441e07b27eSBarry Smith     ierr = DMDAGetCorners(subdm,&si,&sj,NULL,&ni,&nj,NULL);CHKERRQ(ierr);
14515dd08bcSBarry Smith     Ml = ni;
14615dd08bcSBarry Smith     Nl = nj;
1471e07b27eSBarry Smith   } else {
1483ac26c5eSBarry Smith     Ml = Nl = 0;
1491e07b27eSBarry Smith   }
1501e07b27eSBarry Smith 
151e3acf2f7SBarry Smith   ierr = PetscMalloc1(Ml*Nl*2,&fine_indices);CHKERRQ(ierr);
1521e07b27eSBarry Smith   c = 0;
1531e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
1541e07b27eSBarry Smith     for (j=sj; j<sj+nj; j++) {
1551e07b27eSBarry Smith       for (i=si; i<si+ni; i++) {
1561e07b27eSBarry Smith         nidx = (i) + (j)*M;
1571e07b27eSBarry Smith         fine_indices[c  ] = 2 * nidx     ;
1581e07b27eSBarry Smith         fine_indices[c+1] = 2 * nidx + 1 ;
1591e07b27eSBarry Smith         c = c + 2;
1601e07b27eSBarry Smith       }
1611e07b27eSBarry Smith     }
162c2be2c73SBarry Smith     if (c != Ml*Nl*2) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_PLIB,"c %D should equal 2 * Ml %D * Nl %D",c,Ml,Nl);
1631e07b27eSBarry Smith   }
1641e07b27eSBarry Smith 
1651e07b27eSBarry Smith   /* generate scatter */
1661e07b27eSBarry Smith   ierr = ISCreateGeneral(PetscObjectComm((PetscObject)dm),Ml*Nl*2,fine_indices,PETSC_USE_POINTER,&is_fine);CHKERRQ(ierr);
1671e07b27eSBarry Smith   ierr = ISCreateStride(PETSC_COMM_SELF,Ml*Nl*2,0,1,&is_local);CHKERRQ(ierr);
1681e07b27eSBarry Smith 
1691e07b27eSBarry Smith   /* scatter */
1701e07b27eSBarry Smith   ierr = VecCreate(PETSC_COMM_SELF,&perm_coors);CHKERRQ(ierr);
1711e07b27eSBarry Smith   ierr = VecSetSizes(perm_coors,PETSC_DECIDE,Ml*Nl*2);CHKERRQ(ierr);
1721e07b27eSBarry Smith   ierr = VecSetType(perm_coors,VECSEQ);CHKERRQ(ierr);
1731e07b27eSBarry Smith 
1741e07b27eSBarry Smith   ierr = VecScatterCreate(coor_natural,is_fine,perm_coors,is_local,&sctx);CHKERRQ(ierr);
1751e07b27eSBarry Smith   ierr = VecScatterBegin(sctx,coor_natural,perm_coors,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1761e07b27eSBarry Smith   ierr = VecScatterEnd(  sctx,coor_natural,perm_coors,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1771e07b27eSBarry Smith   /* access */
1781e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
1791e07b27eSBarry Smith     Vec               _coors;
1801e07b27eSBarry Smith     const PetscScalar *LA_perm;
1811e07b27eSBarry Smith     PetscScalar       *LA_coors;
1821e07b27eSBarry Smith 
1831e07b27eSBarry Smith     ierr = DMGetCoordinates(subdm,&_coors);CHKERRQ(ierr);
1841e07b27eSBarry Smith     ierr = VecGetArrayRead(perm_coors,&LA_perm);CHKERRQ(ierr);
1851e07b27eSBarry Smith     ierr = VecGetArray(_coors,&LA_coors);CHKERRQ(ierr);
1861e07b27eSBarry Smith     for (i=0; i<Ml*Nl*2; i++) {
1871e07b27eSBarry Smith       LA_coors[i] = LA_perm[i];
1881e07b27eSBarry Smith     }
1891e07b27eSBarry Smith     ierr = VecRestoreArray(_coors,&LA_coors);CHKERRQ(ierr);
1901e07b27eSBarry Smith     ierr = VecRestoreArrayRead(perm_coors,&LA_perm);CHKERRQ(ierr);
1911e07b27eSBarry Smith   }
1921e07b27eSBarry Smith 
1931e07b27eSBarry Smith   /* update local coords */
1941e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
1951e07b27eSBarry Smith     DM  _dmc;
1961e07b27eSBarry Smith     Vec _coors,_coors_local;
1971e07b27eSBarry Smith     ierr = DMGetCoordinateDM(subdm,&_dmc);CHKERRQ(ierr);
1981e07b27eSBarry Smith     ierr = DMGetCoordinates(subdm,&_coors);CHKERRQ(ierr);
1991e07b27eSBarry Smith     ierr = DMGetCoordinatesLocal(subdm,&_coors_local);CHKERRQ(ierr);
2001e07b27eSBarry Smith     ierr = DMGlobalToLocalBegin(_dmc,_coors,INSERT_VALUES,_coors_local);CHKERRQ(ierr);
2011e07b27eSBarry Smith     ierr = DMGlobalToLocalEnd(_dmc,_coors,INSERT_VALUES,_coors_local);CHKERRQ(ierr);
2021e07b27eSBarry Smith   }
2031e07b27eSBarry Smith   ierr = VecScatterDestroy(&sctx);CHKERRQ(ierr);
2041e07b27eSBarry Smith   ierr = ISDestroy(&is_fine);CHKERRQ(ierr);
2051e07b27eSBarry Smith   ierr = PetscFree(fine_indices);CHKERRQ(ierr);
2061e07b27eSBarry Smith   ierr = ISDestroy(&is_local);CHKERRQ(ierr);
2071e07b27eSBarry Smith   ierr = VecDestroy(&perm_coors);CHKERRQ(ierr);
2081e07b27eSBarry Smith   ierr = VecDestroy(&coor_natural);CHKERRQ(ierr);
2091e07b27eSBarry Smith   PetscFunctionReturn(0);
2101e07b27eSBarry Smith }
2111e07b27eSBarry Smith 
2121e07b27eSBarry Smith #undef __FUNCT__
2131e07b27eSBarry Smith #define __FUNCT__ "PCTelescopeSetUp_dmda_repart_coors3d"
2141e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda_repart_coors3d(PetscSubcomm psubcomm,DM dm,DM subdm)
2151e07b27eSBarry Smith {
2161e07b27eSBarry Smith   PetscErrorCode ierr;
2171e07b27eSBarry Smith   DM             cdm;
2181e07b27eSBarry Smith   Vec            coor,coor_natural,perm_coors;
2191e07b27eSBarry Smith   PetscInt       i,j,k,si,sj,sk,ni,nj,nk,M,N,P,Ml,Nl,Pl,c,nidx;
2201e07b27eSBarry Smith   PetscInt       *fine_indices;
2211e07b27eSBarry Smith   IS             is_fine,is_local;
2221e07b27eSBarry Smith   VecScatter     sctx;
2231e07b27eSBarry Smith 
2241e07b27eSBarry Smith   PetscFunctionBegin;
2251e07b27eSBarry Smith   ierr = DMGetCoordinates(dm,&coor);CHKERRQ(ierr);
2261e07b27eSBarry Smith   if (!coor) PetscFunctionReturn(0);
2271e07b27eSBarry Smith 
2281e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
2291e07b27eSBarry Smith     ierr = DMDASetUniformCoordinates(subdm,0.0,1.0,0.0,1.0,0.0,1.0);CHKERRQ(ierr);
2301e07b27eSBarry Smith   }
2311e07b27eSBarry Smith 
2321e07b27eSBarry Smith   /* Get the coordinate vector from the distributed array */
2331e07b27eSBarry Smith   ierr = DMGetCoordinateDM(dm,&cdm);CHKERRQ(ierr);
2341e07b27eSBarry Smith   ierr = DMDACreateNaturalVector(cdm,&coor_natural);CHKERRQ(ierr);
2351e07b27eSBarry Smith   ierr = DMDAGlobalToNaturalBegin(cdm,coor,INSERT_VALUES,coor_natural);CHKERRQ(ierr);
2361e07b27eSBarry Smith   ierr = DMDAGlobalToNaturalEnd(cdm,coor,INSERT_VALUES,coor_natural);CHKERRQ(ierr);
2371e07b27eSBarry Smith 
2381e07b27eSBarry Smith   /* get indices of the guys I want to grab */
2391e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,NULL,&M,&N,&P,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
2401e07b27eSBarry Smith 
2411e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
2421e07b27eSBarry Smith     ierr = DMDAGetCorners(subdm,&si,&sj,&sk,&ni,&nj,&nk);CHKERRQ(ierr);
243553d0ae9SBarry Smith     Ml = ni;
244553d0ae9SBarry Smith     Nl = nj;
245553d0ae9SBarry Smith     Pl = nk;
2461e07b27eSBarry Smith   } else {
2473ac26c5eSBarry Smith     Ml = Nl = Pl = 0;
2481e07b27eSBarry Smith   }
2491e07b27eSBarry Smith 
250e3acf2f7SBarry Smith   ierr = PetscMalloc1(Ml*Nl*Pl*3,&fine_indices);CHKERRQ(ierr);
2511e07b27eSBarry Smith 
2521e07b27eSBarry Smith   c = 0;
2531e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
2541e07b27eSBarry Smith     for (k=sk; k<sk+nk; k++) {
2551e07b27eSBarry Smith       for (j=sj; j<sj+nj; j++) {
2561e07b27eSBarry Smith         for (i=si; i<si+ni; i++) {
2571e07b27eSBarry Smith           nidx = (i) + (j)*M + (k)*M*N;
2581e07b27eSBarry Smith           fine_indices[c  ] = 3 * nidx     ;
2591e07b27eSBarry Smith           fine_indices[c+1] = 3 * nidx + 1 ;
2601e07b27eSBarry Smith           fine_indices[c+2] = 3 * nidx + 2 ;
2611e07b27eSBarry Smith           c = c + 3;
2621e07b27eSBarry Smith         }
2631e07b27eSBarry Smith       }
2641e07b27eSBarry Smith     }
2651e07b27eSBarry Smith   }
2661e07b27eSBarry Smith 
2671e07b27eSBarry Smith   /* generate scatter */
2681e07b27eSBarry Smith   ierr = ISCreateGeneral(PetscObjectComm((PetscObject)dm),Ml*Nl*Pl*3,fine_indices,PETSC_USE_POINTER,&is_fine);CHKERRQ(ierr);
2691e07b27eSBarry Smith   ierr = ISCreateStride(PETSC_COMM_SELF,Ml*Nl*Pl*3,0,1,&is_local);CHKERRQ(ierr);
2701e07b27eSBarry Smith 
2711e07b27eSBarry Smith   /* scatter */
2721e07b27eSBarry Smith   ierr = VecCreate(PETSC_COMM_SELF,&perm_coors);CHKERRQ(ierr);
2731e07b27eSBarry Smith   ierr = VecSetSizes(perm_coors,PETSC_DECIDE,Ml*Nl*Pl*3);CHKERRQ(ierr);
2741e07b27eSBarry Smith   ierr = VecSetType(perm_coors,VECSEQ);CHKERRQ(ierr);
2751e07b27eSBarry Smith   ierr = VecScatterCreate(coor_natural,is_fine,perm_coors,is_local,&sctx);CHKERRQ(ierr);
2761e07b27eSBarry Smith   ierr = VecScatterBegin(sctx,coor_natural,perm_coors,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2771e07b27eSBarry Smith   ierr = VecScatterEnd(  sctx,coor_natural,perm_coors,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2781e07b27eSBarry Smith 
2791e07b27eSBarry Smith   /* access */
2801e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
2811e07b27eSBarry Smith     Vec               _coors;
2821e07b27eSBarry Smith     const PetscScalar *LA_perm;
2831e07b27eSBarry Smith     PetscScalar       *LA_coors;
2841e07b27eSBarry Smith 
2851e07b27eSBarry Smith     ierr = DMGetCoordinates(subdm,&_coors);CHKERRQ(ierr);
2861e07b27eSBarry Smith     ierr = VecGetArrayRead(perm_coors,&LA_perm);CHKERRQ(ierr);
2871e07b27eSBarry Smith     ierr = VecGetArray(_coors,&LA_coors);CHKERRQ(ierr);
2881e07b27eSBarry Smith     for (i=0; i<Ml*Nl*Pl*3; i++) {
2891e07b27eSBarry Smith       LA_coors[i] = LA_perm[i];
2901e07b27eSBarry Smith     }
2911e07b27eSBarry Smith     ierr = VecRestoreArray(_coors,&LA_coors);CHKERRQ(ierr);
2921e07b27eSBarry Smith     ierr = VecRestoreArrayRead(perm_coors,&LA_perm);CHKERRQ(ierr);
2931e07b27eSBarry Smith   }
2941e07b27eSBarry Smith 
2951e07b27eSBarry Smith   /* update local coords */
2961e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
2971e07b27eSBarry Smith     DM  _dmc;
2981e07b27eSBarry Smith     Vec _coors,_coors_local;
2991e07b27eSBarry Smith 
3001e07b27eSBarry Smith     ierr = DMGetCoordinateDM(subdm,&_dmc);CHKERRQ(ierr);
3011e07b27eSBarry Smith     ierr = DMGetCoordinates(subdm,&_coors);CHKERRQ(ierr);
3021e07b27eSBarry Smith     ierr = DMGetCoordinatesLocal(subdm,&_coors_local);CHKERRQ(ierr);
3031e07b27eSBarry Smith     ierr = DMGlobalToLocalBegin(_dmc,_coors,INSERT_VALUES,_coors_local);CHKERRQ(ierr);
3041e07b27eSBarry Smith     ierr = DMGlobalToLocalEnd(_dmc,_coors,INSERT_VALUES,_coors_local);CHKERRQ(ierr);
3051e07b27eSBarry Smith   }
3061e07b27eSBarry Smith 
3071e07b27eSBarry Smith   ierr = VecScatterDestroy(&sctx);CHKERRQ(ierr);
3081e07b27eSBarry Smith   ierr = ISDestroy(&is_fine);CHKERRQ(ierr);
3091e07b27eSBarry Smith   ierr = PetscFree(fine_indices);CHKERRQ(ierr);
3101e07b27eSBarry Smith   ierr = ISDestroy(&is_local);CHKERRQ(ierr);
3111e07b27eSBarry Smith   ierr = VecDestroy(&perm_coors);CHKERRQ(ierr);
3121e07b27eSBarry Smith   ierr = VecDestroy(&coor_natural);CHKERRQ(ierr);
3131e07b27eSBarry Smith   PetscFunctionReturn(0);
3141e07b27eSBarry Smith }
3151e07b27eSBarry Smith 
3161e07b27eSBarry Smith #undef __FUNCT__
3171e07b27eSBarry Smith #define __FUNCT__ "PCTelescopeSetUp_dmda_repart_coors"
3181e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda_repart_coors(PC pc,PC_Telescope sred,PC_Telescope_DMDACtx *ctx)
3191e07b27eSBarry Smith {
3201e07b27eSBarry Smith   PetscInt       dim;
3211e07b27eSBarry Smith   DM             dm,subdm;
3221e07b27eSBarry Smith   PetscSubcomm   psubcomm;
3231e07b27eSBarry Smith   MPI_Comm       comm;
3241e07b27eSBarry Smith   Vec            coor;
3251e07b27eSBarry Smith   PetscErrorCode ierr;
3261e07b27eSBarry Smith 
3271e07b27eSBarry Smith   PetscFunctionBegin;
3281e07b27eSBarry Smith   ierr = PCGetDM(pc,&dm);CHKERRQ(ierr);
3291e07b27eSBarry Smith   ierr = DMGetCoordinates(dm,&coor);CHKERRQ(ierr);
3301e07b27eSBarry Smith   if (!coor) PetscFunctionReturn(0);
3311e07b27eSBarry Smith   psubcomm = sred->psubcomm;
3321e07b27eSBarry Smith   comm = PetscSubcommParent(psubcomm);
3331e07b27eSBarry Smith   subdm = ctx->dmrepart;
3341e07b27eSBarry Smith 
3351e07b27eSBarry Smith 
3361e07b27eSBarry Smith   ierr = PetscInfo(pc,"PCTelescope: setting up the coordinates (DMDA)\n");CHKERRQ(ierr);
3371e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,&dim,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
3381e07b27eSBarry Smith   switch (dim) {
3391e07b27eSBarry Smith   case 1: SETERRQ(comm,PETSC_ERR_SUP,"Telescope: DMDA (1D) repartitioning not provided");
3401e07b27eSBarry Smith     break;
3411e07b27eSBarry Smith   case 2: PCTelescopeSetUp_dmda_repart_coors2d(psubcomm,dm,subdm);
3421e07b27eSBarry Smith     break;
3431e07b27eSBarry Smith   case 3: PCTelescopeSetUp_dmda_repart_coors3d(psubcomm,dm,subdm);
3441e07b27eSBarry Smith     break;
3451e07b27eSBarry Smith   }
3461e07b27eSBarry Smith   PetscFunctionReturn(0);
3471e07b27eSBarry Smith }
3481e07b27eSBarry Smith 
3491e07b27eSBarry Smith /* setup repartitioned dm */
3501e07b27eSBarry Smith #undef __FUNCT__
3511e07b27eSBarry Smith #define __FUNCT__ "PCTelescopeSetUp_dmda_repart"
3521e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda_repart(PC pc,PC_Telescope sred,PC_Telescope_DMDACtx *ctx)
3531e07b27eSBarry Smith {
3541e07b27eSBarry Smith   PetscErrorCode  ierr;
3551e07b27eSBarry Smith   DM              dm;
3561e07b27eSBarry Smith   PetscInt        dim,nx,ny,nz,ndof,nsw,sum,k;
3571e07b27eSBarry Smith   DMBoundaryType  bx,by,bz;
3581e07b27eSBarry Smith   DMDAStencilType stencil;
3591e07b27eSBarry Smith   const PetscInt  *_range_i_re;
3601e07b27eSBarry Smith   const PetscInt  *_range_j_re;
3611e07b27eSBarry Smith   const PetscInt  *_range_k_re;
3621e07b27eSBarry Smith   DMDAInterpolationType itype;
3631e07b27eSBarry Smith   PetscInt              refine_x,refine_y,refine_z;
3641e07b27eSBarry Smith   MPI_Comm              comm,subcomm;
3651e07b27eSBarry Smith   const char            *prefix;
3661e07b27eSBarry Smith 
3671e07b27eSBarry Smith   PetscFunctionBegin;
3681e07b27eSBarry Smith   comm = PetscSubcommParent(sred->psubcomm);
3691e07b27eSBarry Smith   subcomm = PetscSubcommChild(sred->psubcomm);
3701e07b27eSBarry Smith   ierr = PCGetDM(pc,&dm);CHKERRQ(ierr);
3711e07b27eSBarry Smith 
3721e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,&dim,&nx,&ny,&nz,NULL,NULL,NULL,&ndof,&nsw,&bx,&by,&bz,&stencil);CHKERRQ(ierr);
3731e07b27eSBarry Smith   ierr = DMDAGetInterpolationType(dm,&itype);CHKERRQ(ierr);
3741e07b27eSBarry Smith   ierr = DMDAGetRefinementFactor(dm,&refine_x,&refine_y,&refine_z);CHKERRQ(ierr);
3751e07b27eSBarry Smith 
3761e07b27eSBarry Smith   ctx->dmrepart = NULL;
3771e07b27eSBarry Smith   _range_i_re = _range_j_re = _range_k_re = NULL;
3781e07b27eSBarry Smith   /* Create DMDA on the child communicator */
3791e07b27eSBarry Smith   if (isActiveRank(sred->psubcomm)) {
3801e07b27eSBarry Smith     switch (dim) {
3811e07b27eSBarry Smith     case 1:
3821e07b27eSBarry Smith       ierr = PetscInfo(pc,"PCTelescope: setting up the DMDA on comm subset (1D)\n");CHKERRQ(ierr);
3831e07b27eSBarry Smith       /*ierr = DMDACreate1d(subcomm,bx,nx,ndof,nsw,NULL,&ctx->dmrepart);CHKERRQ(ierr);*/
3841e07b27eSBarry Smith       ny = nz = 1;
3851e07b27eSBarry Smith       by = bz = DM_BOUNDARY_NONE;
3861e07b27eSBarry Smith       break;
3871e07b27eSBarry Smith     case 2:
3881e07b27eSBarry Smith       ierr = PetscInfo(pc,"PCTelescope: setting up the DMDA on comm subset (2D)\n");CHKERRQ(ierr);
3891e07b27eSBarry Smith       /*ierr = DMDACreate2d(subcomm,bx,by,stencil,nx,ny, PETSC_DECIDE,PETSC_DECIDE, ndof,nsw, NULL,NULL,&ctx->dmrepart);CHKERRQ(ierr);*/
3901e07b27eSBarry Smith       nz = 1;
3911e07b27eSBarry Smith       bz = DM_BOUNDARY_NONE;
3921e07b27eSBarry Smith       break;
3931e07b27eSBarry Smith     case 3:
3941e07b27eSBarry Smith       ierr = PetscInfo(pc,"PCTelescope: setting up the DMDA on comm subset (3D)\n");CHKERRQ(ierr);
3951e07b27eSBarry Smith       /*ierr = DMDACreate3d(subcomm,bx,by,bz,stencil,nx,ny,nz, PETSC_DECIDE,PETSC_DECIDE,PETSC_DECIDE, ndof,nsw, NULL,NULL,NULL,&ctx->dmrepart);CHKERRQ(ierr);*/
3961e07b27eSBarry Smith       break;
3971e07b27eSBarry Smith     }
3981e07b27eSBarry Smith     /*
3991e07b27eSBarry Smith      The API DMDACreate1d(), DMDACreate2d(), DMDACreate3d() does not allow us to set/append
4001e07b27eSBarry Smith      a unique option prefix for the DM, thus I prefer to expose the contents of these API's here.
4011e07b27eSBarry Smith      This allows users to control the partitioning of the subDM.
4021e07b27eSBarry Smith     */
4031e07b27eSBarry Smith     ierr = DMDACreate(subcomm,&ctx->dmrepart);CHKERRQ(ierr);
4041e07b27eSBarry Smith     /* Set unique option prefix name */
4057c5279cbSDave May     ierr = KSPGetOptionsPrefix(sred->ksp,&prefix);CHKERRQ(ierr);
4061e07b27eSBarry Smith     ierr = DMSetOptionsPrefix(ctx->dmrepart,prefix);CHKERRQ(ierr);
4071e07b27eSBarry Smith     ierr = DMAppendOptionsPrefix(ctx->dmrepart,"repart_");CHKERRQ(ierr);
4081e07b27eSBarry Smith     /* standard setup from DMDACreate{1,2,3}d() */
4091e07b27eSBarry Smith     ierr = DMSetDimension(ctx->dmrepart,dim);CHKERRQ(ierr);
4101e07b27eSBarry Smith     ierr = DMDASetSizes(ctx->dmrepart,nx,ny,nz);CHKERRQ(ierr);
4111e07b27eSBarry Smith     ierr = DMDASetNumProcs(ctx->dmrepart,PETSC_DECIDE,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
4121e07b27eSBarry Smith     ierr = DMDASetBoundaryType(ctx->dmrepart,bx,by,bz);CHKERRQ(ierr);
4131e07b27eSBarry Smith     ierr = DMDASetDof(ctx->dmrepart,ndof);CHKERRQ(ierr);
4141e07b27eSBarry Smith     ierr = DMDASetStencilType(ctx->dmrepart,stencil);CHKERRQ(ierr);
4151e07b27eSBarry Smith     ierr = DMDASetStencilWidth(ctx->dmrepart,nsw);CHKERRQ(ierr);
4161e07b27eSBarry Smith     ierr = DMDASetOwnershipRanges(ctx->dmrepart,NULL,NULL,NULL);CHKERRQ(ierr);
4171e07b27eSBarry Smith     ierr = DMSetFromOptions(ctx->dmrepart);CHKERRQ(ierr);
4181e07b27eSBarry Smith     ierr = DMSetUp(ctx->dmrepart);CHKERRQ(ierr);
4191e07b27eSBarry Smith     /* Set refinement factors and interpolation type from the partent */
4201e07b27eSBarry Smith     ierr = DMDASetRefinementFactor(ctx->dmrepart,refine_x,refine_y,refine_z);CHKERRQ(ierr);
4211e07b27eSBarry Smith     ierr = DMDASetInterpolationType(ctx->dmrepart,itype);CHKERRQ(ierr);
4221e07b27eSBarry Smith 
4231e07b27eSBarry Smith     ierr = DMDAGetInfo(ctx->dmrepart,NULL,NULL,NULL,NULL,&ctx->Mp_re,&ctx->Np_re,&ctx->Pp_re,NULL,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
4241e07b27eSBarry Smith     ierr = DMDAGetOwnershipRanges(ctx->dmrepart,&_range_i_re,&_range_j_re,&_range_k_re);CHKERRQ(ierr);
4255e897e82SDave May 
4265e897e82SDave May     ctx->dmrepart->ops->creatematrix = dm->ops->creatematrix;
4275e897e82SDave May     ctx->dmrepart->ops->createdomaindecomposition = dm->ops->createdomaindecomposition;
4281e07b27eSBarry Smith   }
4291e07b27eSBarry Smith 
4301e07b27eSBarry Smith   /* generate ranges for repartitioned dm */
4311e07b27eSBarry Smith   /* note - assume rank 0 always participates */
4321e07b27eSBarry Smith   ierr = MPI_Bcast(&ctx->Mp_re,1,MPIU_INT,0,comm);CHKERRQ(ierr);
4331e07b27eSBarry Smith   ierr = MPI_Bcast(&ctx->Np_re,1,MPIU_INT,0,comm);CHKERRQ(ierr);
4341e07b27eSBarry Smith   ierr = MPI_Bcast(&ctx->Pp_re,1,MPIU_INT,0,comm);CHKERRQ(ierr);
4351e07b27eSBarry Smith 
436c2be2c73SBarry Smith   ierr = PetscCalloc1(ctx->Mp_re,&ctx->range_i_re);CHKERRQ(ierr);
437c2be2c73SBarry Smith   ierr = PetscCalloc1(ctx->Np_re,&ctx->range_j_re);CHKERRQ(ierr);
438c2be2c73SBarry Smith   ierr = PetscCalloc1(ctx->Pp_re,&ctx->range_k_re);CHKERRQ(ierr);
4391e07b27eSBarry Smith 
440e3acf2f7SBarry Smith   if (_range_i_re) {ierr = PetscMemcpy(ctx->range_i_re,_range_i_re,sizeof(PetscInt)*ctx->Mp_re);CHKERRQ(ierr);}
441e3acf2f7SBarry Smith   if (_range_j_re) {ierr = PetscMemcpy(ctx->range_j_re,_range_j_re,sizeof(PetscInt)*ctx->Np_re);CHKERRQ(ierr);}
442e3acf2f7SBarry Smith   if (_range_k_re) {ierr = PetscMemcpy(ctx->range_k_re,_range_k_re,sizeof(PetscInt)*ctx->Pp_re);CHKERRQ(ierr);}
4431e07b27eSBarry Smith 
4441e07b27eSBarry Smith   ierr = MPI_Bcast(ctx->range_i_re,ctx->Mp_re,MPIU_INT,0,comm);CHKERRQ(ierr);
4451e07b27eSBarry Smith   ierr = MPI_Bcast(ctx->range_j_re,ctx->Np_re,MPIU_INT,0,comm);CHKERRQ(ierr);
4461e07b27eSBarry Smith   ierr = MPI_Bcast(ctx->range_k_re,ctx->Pp_re,MPIU_INT,0,comm);CHKERRQ(ierr);
4471e07b27eSBarry Smith 
448e3acf2f7SBarry Smith   ierr = PetscMalloc1(ctx->Mp_re,&ctx->start_i_re);CHKERRQ(ierr);
449e3acf2f7SBarry Smith   ierr = PetscMalloc1(ctx->Np_re,&ctx->start_j_re);CHKERRQ(ierr);
450e3acf2f7SBarry Smith   ierr = PetscMalloc1(ctx->Pp_re,&ctx->start_k_re);CHKERRQ(ierr);
4511e07b27eSBarry Smith 
4521e07b27eSBarry Smith   sum = 0;
4531e07b27eSBarry Smith   for (k=0; k<ctx->Mp_re; k++) {
4541e07b27eSBarry Smith     ctx->start_i_re[k] = sum;
4551e07b27eSBarry Smith     sum += ctx->range_i_re[k];
4561e07b27eSBarry Smith   }
4571e07b27eSBarry Smith 
4581e07b27eSBarry Smith   sum = 0;
4591e07b27eSBarry Smith   for (k=0; k<ctx->Np_re; k++) {
4601e07b27eSBarry Smith     ctx->start_j_re[k] = sum;
4611e07b27eSBarry Smith     sum += ctx->range_j_re[k];
4621e07b27eSBarry Smith   }
4631e07b27eSBarry Smith 
4641e07b27eSBarry Smith   sum = 0;
4651e07b27eSBarry Smith   for (k=0; k<ctx->Pp_re; k++) {
4661e07b27eSBarry Smith     ctx->start_k_re[k] = sum;
4671e07b27eSBarry Smith     sum += ctx->range_k_re[k];
4681e07b27eSBarry Smith   }
4691e07b27eSBarry Smith 
470ba1c3560SDave May   /* attach repartitioned dm to child ksp */
471ba1c3560SDave May   {
472ba1c3560SDave May     PetscErrorCode (*dmksp_func)(KSP,Mat,Mat,void*);
473ba1c3560SDave May     void           *dmksp_ctx;
474ba1c3560SDave May 
475ba1c3560SDave May     ierr = DMKSPGetComputeOperators(dm,&dmksp_func,&dmksp_ctx);CHKERRQ(ierr);
476ba1c3560SDave May 
4771e07b27eSBarry Smith     /* attach dm to ksp on sub communicator */
4781e07b27eSBarry Smith     if (isActiveRank(sred->psubcomm)) {
4791e07b27eSBarry Smith       ierr = KSPSetDM(sred->ksp,ctx->dmrepart);CHKERRQ(ierr);
480ba1c3560SDave May 
481c5db1f53SDave May       if (!dmksp_func || sred->ignore_kspcomputeoperators) {
4821e07b27eSBarry Smith         ierr = KSPSetDMActive(sred->ksp,PETSC_FALSE);CHKERRQ(ierr);
483ba1c3560SDave May       } else {
484ba1c3560SDave May         /* sub ksp inherits dmksp_func and context provided by user */
485ba1c3560SDave May         ierr = KSPSetComputeOperators(sred->ksp,dmksp_func,dmksp_ctx);CHKERRQ(ierr);
486ba1c3560SDave May         ierr = KSPSetDMActive(sred->ksp,PETSC_TRUE);CHKERRQ(ierr);
487ba1c3560SDave May       }
488ba1c3560SDave May     }
4891e07b27eSBarry Smith   }
4901e07b27eSBarry Smith   PetscFunctionReturn(0);
4911e07b27eSBarry Smith }
4921e07b27eSBarry Smith 
4931e07b27eSBarry Smith #undef __FUNCT__
4941e07b27eSBarry Smith #define __FUNCT__ "PCTelescopeSetUp_dmda_permutation_3d"
4951e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda_permutation_3d(PC pc,PC_Telescope sred,PC_Telescope_DMDACtx *ctx)
4961e07b27eSBarry Smith {
4971e07b27eSBarry Smith   PetscErrorCode ierr;
4981e07b27eSBarry Smith   DM             dm;
4991e07b27eSBarry Smith   MPI_Comm       comm;
5001e07b27eSBarry Smith   Mat            Pscalar,P;
5011e07b27eSBarry Smith   PetscInt       ndof;
5021e07b27eSBarry Smith   PetscInt       i,j,k,location,startI[3],endI[3],lenI[3],nx,ny,nz;
5031e07b27eSBarry Smith   PetscInt       sr,er,Mr;
5041e07b27eSBarry Smith   Vec            V;
5051e07b27eSBarry Smith 
5061e07b27eSBarry Smith   PetscFunctionBegin;
5071e07b27eSBarry Smith   ierr = PetscInfo(pc,"PCTelescope: setting up the permutation matrix (DMDA-3D)\n");CHKERRQ(ierr);
5081e07b27eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr);
5091e07b27eSBarry Smith 
5101e07b27eSBarry Smith   ierr = PCGetDM(pc,&dm);CHKERRQ(ierr);
5111e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,NULL,&nx,&ny,&nz,NULL,NULL,NULL,&ndof,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
5121e07b27eSBarry Smith 
5131e07b27eSBarry Smith   ierr = DMGetGlobalVector(dm,&V);CHKERRQ(ierr);
5141e07b27eSBarry Smith   ierr = VecGetSize(V,&Mr);CHKERRQ(ierr);
5151e07b27eSBarry Smith   ierr = VecGetOwnershipRange(V,&sr,&er);CHKERRQ(ierr);
5161e07b27eSBarry Smith   ierr = DMRestoreGlobalVector(dm,&V);CHKERRQ(ierr);
5171e07b27eSBarry Smith   sr = sr / ndof;
5181e07b27eSBarry Smith   er = er / ndof;
5191e07b27eSBarry Smith   Mr = Mr / ndof;
5201e07b27eSBarry Smith 
5211e07b27eSBarry Smith   ierr = MatCreate(comm,&Pscalar);CHKERRQ(ierr);
5221e07b27eSBarry Smith   ierr = MatSetSizes(Pscalar,(er-sr),(er-sr),Mr,Mr);CHKERRQ(ierr);
5231e07b27eSBarry Smith   ierr = MatSetType(Pscalar,MATAIJ);CHKERRQ(ierr);
524308c2a70SDave May   ierr = MatSeqAIJSetPreallocation(Pscalar,1,NULL);CHKERRQ(ierr);
525308c2a70SDave May   ierr = MatMPIAIJSetPreallocation(Pscalar,1,NULL,1,NULL);CHKERRQ(ierr);
5261e07b27eSBarry Smith 
5271e07b27eSBarry Smith   ierr = DMDAGetCorners(dm,NULL,NULL,NULL,&lenI[0],&lenI[1],&lenI[2]);CHKERRQ(ierr);
5281e07b27eSBarry Smith   ierr = DMDAGetCorners(dm,&startI[0],&startI[1],&startI[2],&endI[0],&endI[1],&endI[2]);CHKERRQ(ierr);
5291e07b27eSBarry Smith   endI[0] += startI[0];
5301e07b27eSBarry Smith   endI[1] += startI[1];
5311e07b27eSBarry Smith   endI[2] += startI[2];
5321e07b27eSBarry Smith 
5331e07b27eSBarry Smith   for (k=startI[2]; k<endI[2]; k++) {
5341e07b27eSBarry Smith     for (j=startI[1]; j<endI[1]; j++) {
5351e07b27eSBarry Smith       for (i=startI[0]; i<endI[0]; i++) {
5361e07b27eSBarry Smith         PetscMPIInt rank_ijk_re,rank_reI[3];
5371e07b27eSBarry Smith         PetscInt    s0_re;
538c6a0d831SBarry Smith         PetscInt    ii,jj,kk,local_ijk_re,mapped_ijk;
5391e07b27eSBarry Smith         PetscInt    lenI_re[3];
5401e07b27eSBarry Smith 
5411e07b27eSBarry Smith         location = (i - startI[0]) + (j - startI[1])*lenI[0] + (k - startI[2])*lenI[0]*lenI[1];
5421e07b27eSBarry Smith         ierr = _DMDADetermineRankFromGlobalIJK(3,i,j,k,   ctx->Mp_re,ctx->Np_re,ctx->Pp_re,
5431e07b27eSBarry Smith                                                ctx->start_i_re,ctx->start_j_re,ctx->start_k_re,
5441e07b27eSBarry Smith                                                ctx->range_i_re,ctx->range_j_re,ctx->range_k_re,
5451e07b27eSBarry Smith                                                &rank_reI[0],&rank_reI[1],&rank_reI[2],&rank_ijk_re);CHKERRQ(ierr);
5461e07b27eSBarry Smith         ierr = _DMDADetermineGlobalS0(3,rank_ijk_re, ctx->Mp_re,ctx->Np_re,ctx->Pp_re, ctx->range_i_re,ctx->range_j_re,ctx->range_k_re, &s0_re);CHKERRQ(ierr);
5471e07b27eSBarry Smith         ii = i - ctx->start_i_re[ rank_reI[0] ];
5481e07b27eSBarry Smith         if (ii < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmdarepart-perm3d] index error ii");
5491e07b27eSBarry Smith         jj = j - ctx->start_j_re[ rank_reI[1] ];
5501e07b27eSBarry Smith         if (jj < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmdarepart-perm3d] index error jj");
5511e07b27eSBarry Smith         kk = k - ctx->start_k_re[ rank_reI[2] ];
5521e07b27eSBarry Smith         if (kk < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmdarepart-perm3d] index error kk");
5531e07b27eSBarry Smith         lenI_re[0] = ctx->range_i_re[ rank_reI[0] ];
5541e07b27eSBarry Smith         lenI_re[1] = ctx->range_j_re[ rank_reI[1] ];
5551e07b27eSBarry Smith         lenI_re[2] = ctx->range_k_re[ rank_reI[2] ];
5561e07b27eSBarry Smith         local_ijk_re = ii + jj * lenI_re[0] + kk * lenI_re[0] * lenI_re[1];
5571e07b27eSBarry Smith         mapped_ijk = s0_re + local_ijk_re;
5581e07b27eSBarry Smith         ierr = MatSetValue(Pscalar,sr+location,mapped_ijk,1.0,INSERT_VALUES);CHKERRQ(ierr);
5591e07b27eSBarry Smith       }
5601e07b27eSBarry Smith     }
5611e07b27eSBarry Smith   }
5621e07b27eSBarry Smith   ierr = MatAssemblyBegin(Pscalar,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
5631e07b27eSBarry Smith   ierr = MatAssemblyEnd(Pscalar,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
5641e07b27eSBarry Smith   ierr = MatCreateMAIJ(Pscalar,ndof,&P);CHKERRQ(ierr);
5651e07b27eSBarry Smith   ierr = MatDestroy(&Pscalar);CHKERRQ(ierr);
5661e07b27eSBarry Smith   ctx->permutation = P;
5671e07b27eSBarry Smith   PetscFunctionReturn(0);
5681e07b27eSBarry Smith }
5691e07b27eSBarry Smith 
5701e07b27eSBarry Smith #undef __FUNCT__
5711e07b27eSBarry Smith #define __FUNCT__ "PCTelescopeSetUp_dmda_permutation_2d"
5721e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda_permutation_2d(PC pc,PC_Telescope sred,PC_Telescope_DMDACtx *ctx)
5731e07b27eSBarry Smith {
5741e07b27eSBarry Smith   PetscErrorCode ierr;
5751e07b27eSBarry Smith   DM             dm;
5761e07b27eSBarry Smith   MPI_Comm       comm;
5771e07b27eSBarry Smith   Mat            Pscalar,P;
5781e07b27eSBarry Smith   PetscInt       ndof;
5791e07b27eSBarry Smith   PetscInt       i,j,location,startI[2],endI[2],lenI[2],nx,ny,nz;
5801e07b27eSBarry Smith   PetscInt       sr,er,Mr;
5811e07b27eSBarry Smith   Vec            V;
5821e07b27eSBarry Smith 
5831e07b27eSBarry Smith   PetscFunctionBegin;
5841e07b27eSBarry Smith   ierr = PetscInfo(pc,"PCTelescope: setting up the permutation matrix (DMDA-2D)\n");CHKERRQ(ierr);
5851e07b27eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr);
5861e07b27eSBarry Smith   ierr = PCGetDM(pc,&dm);CHKERRQ(ierr);
5871e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,NULL,&nx,&ny,&nz,NULL,NULL,NULL,&ndof,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
5881e07b27eSBarry Smith   ierr = DMGetGlobalVector(dm,&V);CHKERRQ(ierr);
5891e07b27eSBarry Smith   ierr = VecGetSize(V,&Mr);CHKERRQ(ierr);
5901e07b27eSBarry Smith   ierr = VecGetOwnershipRange(V,&sr,&er);CHKERRQ(ierr);
5911e07b27eSBarry Smith   ierr = DMRestoreGlobalVector(dm,&V);CHKERRQ(ierr);
5921e07b27eSBarry Smith   sr = sr / ndof;
5931e07b27eSBarry Smith   er = er / ndof;
5941e07b27eSBarry Smith   Mr = Mr / ndof;
5951e07b27eSBarry Smith 
5961e07b27eSBarry Smith   ierr = MatCreate(comm,&Pscalar);CHKERRQ(ierr);
5971e07b27eSBarry Smith   ierr = MatSetSizes(Pscalar,(er-sr),(er-sr),Mr,Mr);CHKERRQ(ierr);
5981e07b27eSBarry Smith   ierr = MatSetType(Pscalar,MATAIJ);CHKERRQ(ierr);
599308c2a70SDave May   ierr = MatSeqAIJSetPreallocation(Pscalar,1,NULL);CHKERRQ(ierr);
600308c2a70SDave May   ierr = MatMPIAIJSetPreallocation(Pscalar,1,NULL,1,NULL);CHKERRQ(ierr);
6011e07b27eSBarry Smith 
6021e07b27eSBarry Smith   ierr = DMDAGetCorners(dm,NULL,NULL,NULL,&lenI[0],&lenI[1],NULL);CHKERRQ(ierr);
6031e07b27eSBarry Smith   ierr = DMDAGetCorners(dm,&startI[0],&startI[1],NULL,&endI[0],&endI[1],NULL);CHKERRQ(ierr);
6041e07b27eSBarry Smith   endI[0] += startI[0];
6051e07b27eSBarry Smith   endI[1] += startI[1];
6061e07b27eSBarry Smith 
6071e07b27eSBarry Smith   for (j=startI[1]; j<endI[1]; j++) {
6081e07b27eSBarry Smith     for (i=startI[0]; i<endI[0]; i++) {
6091e07b27eSBarry Smith       PetscMPIInt rank_ijk_re,rank_reI[3];
6101e07b27eSBarry Smith       PetscInt    s0_re;
611c6a0d831SBarry Smith       PetscInt    ii,jj,local_ijk_re,mapped_ijk;
6121e07b27eSBarry Smith       PetscInt    lenI_re[3];
6131e07b27eSBarry Smith 
6141e07b27eSBarry Smith       location = (i - startI[0]) + (j - startI[1])*lenI[0];
6151e07b27eSBarry Smith       ierr = _DMDADetermineRankFromGlobalIJK(2,i,j,0,   ctx->Mp_re,ctx->Np_re,ctx->Pp_re,
6161e07b27eSBarry Smith                                              ctx->start_i_re,ctx->start_j_re,ctx->start_k_re,
6171e07b27eSBarry Smith                                              ctx->range_i_re,ctx->range_j_re,ctx->range_k_re,
6181e07b27eSBarry Smith                                              &rank_reI[0],&rank_reI[1],NULL,&rank_ijk_re);CHKERRQ(ierr);
6191e07b27eSBarry Smith 
6201e07b27eSBarry Smith       ierr = _DMDADetermineGlobalS0(2,rank_ijk_re, ctx->Mp_re,ctx->Np_re,ctx->Pp_re, ctx->range_i_re,ctx->range_j_re,ctx->range_k_re, &s0_re);CHKERRQ(ierr);
6211e07b27eSBarry Smith 
6221e07b27eSBarry Smith       ii = i - ctx->start_i_re[ rank_reI[0] ];
6231e07b27eSBarry Smith       if (ii < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmdarepart-perm2d] index error ii");
6241e07b27eSBarry Smith       jj = j - ctx->start_j_re[ rank_reI[1] ];
6251e07b27eSBarry Smith       if (jj < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmdarepart-perm2d] index error jj");
6261e07b27eSBarry Smith 
6271e07b27eSBarry Smith       lenI_re[0] = ctx->range_i_re[ rank_reI[0] ];
6281e07b27eSBarry Smith       lenI_re[1] = ctx->range_j_re[ rank_reI[1] ];
6291e07b27eSBarry Smith       local_ijk_re = ii + jj * lenI_re[0];
6301e07b27eSBarry Smith       mapped_ijk = s0_re + local_ijk_re;
6311e07b27eSBarry Smith       ierr = MatSetValue(Pscalar,sr+location,mapped_ijk,1.0,INSERT_VALUES);CHKERRQ(ierr);
6321e07b27eSBarry Smith     }
6331e07b27eSBarry Smith   }
6341e07b27eSBarry Smith   ierr = MatAssemblyBegin(Pscalar,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
6351e07b27eSBarry Smith   ierr = MatAssemblyEnd(Pscalar,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
6361e07b27eSBarry Smith   ierr = MatCreateMAIJ(Pscalar,ndof,&P);CHKERRQ(ierr);
6371e07b27eSBarry Smith   ierr = MatDestroy(&Pscalar);CHKERRQ(ierr);
6381e07b27eSBarry Smith   ctx->permutation = P;
6391e07b27eSBarry Smith   PetscFunctionReturn(0);
6401e07b27eSBarry Smith }
6411e07b27eSBarry Smith 
6421e07b27eSBarry Smith #undef __FUNCT__
6431e07b27eSBarry Smith #define __FUNCT__ "PCTelescopeSetUp_dmda_scatters"
6441e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda_scatters(PC pc,PC_Telescope sred,PC_Telescope_DMDACtx *ctx)
6451e07b27eSBarry Smith {
6461e07b27eSBarry Smith   PetscErrorCode ierr;
6471e07b27eSBarry Smith   Vec            xred,yred,xtmp,x,xp;
6481e07b27eSBarry Smith   VecScatter     scatter;
6491e07b27eSBarry Smith   IS             isin;
6501e07b27eSBarry Smith   Mat            B;
6511e07b27eSBarry Smith   PetscInt       m,bs,st,ed;
6521e07b27eSBarry Smith   MPI_Comm       comm;
6531e07b27eSBarry Smith 
6541e07b27eSBarry Smith   PetscFunctionBegin;
6551e07b27eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr);
6561e07b27eSBarry Smith   ierr = PCGetOperators(pc,NULL,&B);CHKERRQ(ierr);
6571e07b27eSBarry Smith   ierr = MatCreateVecs(B,&x,NULL);CHKERRQ(ierr);
6581e07b27eSBarry Smith   ierr = MatGetBlockSize(B,&bs);CHKERRQ(ierr);
6591e07b27eSBarry Smith   ierr = VecDuplicate(x,&xp);CHKERRQ(ierr);
6603ac26c5eSBarry Smith   m = 0;
6611e07b27eSBarry Smith   xred = NULL;
6621e07b27eSBarry Smith   yred = NULL;
6631e07b27eSBarry Smith   if (isActiveRank(sred->psubcomm)) {
6641e07b27eSBarry Smith     ierr = DMCreateGlobalVector(ctx->dmrepart,&xred);CHKERRQ(ierr);
6651e07b27eSBarry Smith     ierr = VecDuplicate(xred,&yred);CHKERRQ(ierr);
6661e07b27eSBarry Smith     ierr = VecGetOwnershipRange(xred,&st,&ed);CHKERRQ(ierr);
6671e07b27eSBarry Smith     ierr = ISCreateStride(comm,ed-st,st,1,&isin);CHKERRQ(ierr);
6681e07b27eSBarry Smith     ierr = VecGetLocalSize(xred,&m);
6691e07b27eSBarry Smith   } else {
6701e07b27eSBarry Smith     ierr = VecGetOwnershipRange(x,&st,&ed);CHKERRQ(ierr);
6713ac26c5eSBarry Smith     ierr = ISCreateStride(comm,0,st,1,&isin);CHKERRQ(ierr);
6721e07b27eSBarry Smith   }
6731e07b27eSBarry Smith   ierr = ISSetBlockSize(isin,bs);CHKERRQ(ierr);
6741e07b27eSBarry Smith   ierr = VecCreate(comm,&xtmp);CHKERRQ(ierr);
6751e07b27eSBarry Smith   ierr = VecSetSizes(xtmp,m,PETSC_DECIDE);CHKERRQ(ierr);
6761e07b27eSBarry Smith   ierr = VecSetBlockSize(xtmp,bs);CHKERRQ(ierr);
6771e07b27eSBarry Smith   ierr = VecSetType(xtmp,((PetscObject)x)->type_name);CHKERRQ(ierr);
6781e07b27eSBarry Smith   ierr = VecScatterCreate(x,isin,xtmp,NULL,&scatter);CHKERRQ(ierr);
6791e07b27eSBarry Smith   sred->xred    = xred;
6801e07b27eSBarry Smith   sred->yred    = yred;
6811e07b27eSBarry Smith   sred->isin    = isin;
6821e07b27eSBarry Smith   sred->scatter = scatter;
6831e07b27eSBarry Smith   sred->xtmp    = xtmp;
6841e07b27eSBarry Smith 
6851e07b27eSBarry Smith   ctx->xp       = xp;
6861e07b27eSBarry Smith   ierr = VecDestroy(&x);CHKERRQ(ierr);
6871e07b27eSBarry Smith   PetscFunctionReturn(0);
6881e07b27eSBarry Smith }
6891e07b27eSBarry Smith 
6901e07b27eSBarry Smith #undef __FUNCT__
6911e07b27eSBarry Smith #define __FUNCT__ "PCTelescopeSetUp_dmda"
6921e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda(PC pc,PC_Telescope sred)
6931e07b27eSBarry Smith {
6941e07b27eSBarry Smith   PC_Telescope_DMDACtx *ctx;
6951e07b27eSBarry Smith   PetscInt                 dim;
6961e07b27eSBarry Smith   DM                       dm;
6971e07b27eSBarry Smith   MPI_Comm                 comm;
6981e07b27eSBarry Smith   PetscErrorCode           ierr;
6991e07b27eSBarry Smith 
7001e07b27eSBarry Smith   PetscFunctionBegin;
7011e07b27eSBarry Smith   ierr = PetscInfo(pc,"PCTelescope: setup (DMDA)\n");CHKERRQ(ierr);
702e3acf2f7SBarry Smith   PetscMalloc1(1,&ctx);
7031e07b27eSBarry Smith   PetscMemzero(ctx,sizeof(PC_Telescope_DMDACtx));
7041e07b27eSBarry Smith   sred->dm_ctx = (void*)ctx;
7051e07b27eSBarry Smith 
7061e07b27eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr);
7071e07b27eSBarry Smith   ierr = PCGetDM(pc,&dm);CHKERRQ(ierr);
7081e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,&dim,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
7091e07b27eSBarry Smith 
7101e07b27eSBarry Smith   PCTelescopeSetUp_dmda_repart(pc,sred,ctx);
7111e07b27eSBarry Smith   PCTelescopeSetUp_dmda_repart_coors(pc,sred,ctx);
7121e07b27eSBarry Smith   switch (dim) {
7131e07b27eSBarry Smith   case 1: SETERRQ(comm,PETSC_ERR_SUP,"Telescope: DMDA (1D) repartitioning not provided");
7141e07b27eSBarry Smith     break;
7151e07b27eSBarry Smith   case 2: ierr = PCTelescopeSetUp_dmda_permutation_2d(pc,sred,ctx);CHKERRQ(ierr);
7161e07b27eSBarry Smith     break;
7171e07b27eSBarry Smith   case 3: ierr = PCTelescopeSetUp_dmda_permutation_3d(pc,sred,ctx);CHKERRQ(ierr);
7181e07b27eSBarry Smith     break;
7191e07b27eSBarry Smith   }
7201e07b27eSBarry Smith   ierr = PCTelescopeSetUp_dmda_scatters(pc,sred,ctx);CHKERRQ(ierr);
7211e07b27eSBarry Smith   PetscFunctionReturn(0);
7221e07b27eSBarry Smith }
7231e07b27eSBarry Smith 
7241e07b27eSBarry Smith #undef __FUNCT__
725ba1c3560SDave May #define __FUNCT__ "PCTelescopeMatCreate_dmda_dmactivefalse"
726ba1c3560SDave May PetscErrorCode PCTelescopeMatCreate_dmda_dmactivefalse(PC pc,PC_Telescope sred,MatReuse reuse,Mat *A)
7271e07b27eSBarry Smith {
7281e07b27eSBarry Smith   PetscErrorCode ierr;
7291e07b27eSBarry Smith   PC_Telescope_DMDACtx *ctx;
7301e07b27eSBarry Smith   MPI_Comm       comm,subcomm;
7311e07b27eSBarry Smith   Mat            Bperm,Bred,B,P;
7321e07b27eSBarry Smith   PetscInt       nr,nc;
7331e07b27eSBarry Smith   IS             isrow,iscol;
7341e07b27eSBarry Smith   Mat            Blocal,*_Blocal;
7351e07b27eSBarry Smith 
7361e07b27eSBarry Smith   PetscFunctionBegin;
7371e07b27eSBarry Smith   ierr = PetscInfo(pc,"PCTelescope: updating the redundant preconditioned operator (DMDA)\n");CHKERRQ(ierr);
7381e07b27eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr);
7391e07b27eSBarry Smith   subcomm = PetscSubcommChild(sred->psubcomm);
7401e07b27eSBarry Smith   ctx = (PC_Telescope_DMDACtx*)sred->dm_ctx;
7411e07b27eSBarry Smith 
7421e07b27eSBarry Smith   ierr = PCGetOperators(pc,NULL,&B);CHKERRQ(ierr);
7431e07b27eSBarry Smith   ierr = MatGetSize(B,&nr,&nc);CHKERRQ(ierr);
7441e07b27eSBarry Smith 
7451e07b27eSBarry Smith   P = ctx->permutation;
7461e07b27eSBarry Smith   ierr = MatPtAP(B,P,MAT_INITIAL_MATRIX,1.1,&Bperm);CHKERRQ(ierr);
7471e07b27eSBarry Smith 
7481e07b27eSBarry Smith   /* Get submatrices */
7491e07b27eSBarry Smith   isrow = sred->isin;
7501e07b27eSBarry Smith   ierr = ISCreateStride(comm,nc,0,1,&iscol);CHKERRQ(ierr);
7511e07b27eSBarry Smith 
7521e07b27eSBarry Smith   ierr = MatGetSubMatrices(Bperm,1,&isrow,&iscol,MAT_INITIAL_MATRIX,&_Blocal);CHKERRQ(ierr);
7531e07b27eSBarry Smith   Blocal = *_Blocal;
7541e07b27eSBarry Smith   Bred = NULL;
7551e07b27eSBarry Smith   if (isActiveRank(sred->psubcomm)) {
7561e07b27eSBarry Smith     PetscInt mm;
7571e07b27eSBarry Smith 
7581e07b27eSBarry Smith     if (reuse != MAT_INITIAL_MATRIX) {Bred = *A;}
7591e07b27eSBarry Smith     ierr = MatGetSize(Blocal,&mm,NULL);CHKERRQ(ierr);
760bfd6bcc6SSatish Balay     /* ierr = MatCreateMPIMatConcatenateSeqMat(subcomm,Blocal,PETSC_DECIDE,reuse,&Bred);CHKERRQ(ierr); */
7611e07b27eSBarry Smith     ierr = MatCreateMPIMatConcatenateSeqMat(subcomm,Blocal,mm,reuse,&Bred);CHKERRQ(ierr);
7621e07b27eSBarry Smith   }
7631e07b27eSBarry Smith   *A = Bred;
7641e07b27eSBarry Smith 
7651e07b27eSBarry Smith   ierr = ISDestroy(&iscol);CHKERRQ(ierr);
7661e07b27eSBarry Smith   ierr = MatDestroy(&Bperm);CHKERRQ(ierr);
7671e07b27eSBarry Smith   ierr = MatDestroyMatrices(1,&_Blocal);CHKERRQ(ierr);
7681e07b27eSBarry Smith   PetscFunctionReturn(0);
7691e07b27eSBarry Smith }
7701e07b27eSBarry Smith 
7711e07b27eSBarry Smith #undef __FUNCT__
772ba1c3560SDave May #define __FUNCT__ "PCTelescopeMatCreate_dmda"
773ba1c3560SDave May PetscErrorCode PCTelescopeMatCreate_dmda(PC pc,PC_Telescope sred,MatReuse reuse,Mat *A)
774ba1c3560SDave May {
775ba1c3560SDave May   PetscErrorCode ierr;
776ba1c3560SDave May   DM             dm;
777ba1c3560SDave May   PetscErrorCode (*dmksp_func)(KSP,Mat,Mat,void*);
778ba1c3560SDave May   void           *dmksp_ctx;
779ba1c3560SDave May 
780ba1c3560SDave May   PetscFunctionBegin;
781ba1c3560SDave May   ierr = PCGetDM(pc,&dm);CHKERRQ(ierr);
782ba1c3560SDave May   ierr = DMKSPGetComputeOperators(dm,&dmksp_func,&dmksp_ctx);CHKERRQ(ierr);
783dc9ee9fdSDave May   /* We assume that dmksp_func = NULL, is equivalent to dmActive = PETSC_FALSE */
7847c5279cbSDave May   if (dmksp_func && !sred->ignore_kspcomputeoperators) {
785ba1c3560SDave May     DM  dmrepart;
786*28323a89SDave May     Mat Ak;
787ba1c3560SDave May 
788ba1c3560SDave May     *A = NULL;
789ba1c3560SDave May     if (isActiveRank(sred->psubcomm)) {
790ba1c3560SDave May       ierr = KSPGetDM(sred->ksp,&dmrepart);CHKERRQ(ierr);
791ba1c3560SDave May       if (reuse == MAT_INITIAL_MATRIX) {
792ba1c3560SDave May         ierr = DMCreateMatrix(dmrepart,&Ak);CHKERRQ(ierr);
793ba1c3560SDave May         *A = Ak;
794ba1c3560SDave May       } else if (reuse == MAT_REUSE_MATRIX) {
795ba1c3560SDave May         Ak = *A;
796ba1c3560SDave May       }
7975c5dbb1cSDave May       /*
7985c5dbb1cSDave May        There is no need to explicitly assemble the operator now,
7995c5dbb1cSDave May        the sub-KSP will call the method provided to KSPSetComputeOperators() during KSPSetUp()
8005c5dbb1cSDave May       */
801ba1c3560SDave May     }
802ba1c3560SDave May   } else {
803ba1c3560SDave May     ierr = PCTelescopeMatCreate_dmda_dmactivefalse(pc,sred,reuse,A);CHKERRQ(ierr);
804ba1c3560SDave May   }
805ba1c3560SDave May   PetscFunctionReturn(0);
806ba1c3560SDave May }
807ba1c3560SDave May 
808ba1c3560SDave May #undef __FUNCT__
8091e07b27eSBarry Smith #define __FUNCT__ "PCTelescopeMatNullSpaceCreate_dmda"
8101e07b27eSBarry Smith PetscErrorCode PCTelescopeMatNullSpaceCreate_dmda(PC pc,PC_Telescope sred,Mat sub_mat)
8111e07b27eSBarry Smith {
8121e07b27eSBarry Smith   PetscErrorCode   ierr;
8131e07b27eSBarry Smith   MatNullSpace     nullspace,sub_nullspace;
8141e07b27eSBarry Smith   Mat              A,B;
8151e07b27eSBarry Smith   PetscBool        has_const;
8161e07b27eSBarry Smith   PetscInt         i,k,n;
8171e07b27eSBarry Smith   const Vec        *vecs;
8181e07b27eSBarry Smith   Vec              *sub_vecs;
8191e07b27eSBarry Smith   MPI_Comm         subcomm;
8201e07b27eSBarry Smith   PC_Telescope_DMDACtx *ctx;
8211e07b27eSBarry Smith 
8221e07b27eSBarry Smith   PetscFunctionBegin;
8231e07b27eSBarry Smith   ierr = PCGetOperators(pc,&A,&B);CHKERRQ(ierr);
8241e07b27eSBarry Smith   ierr = MatGetNullSpace(B,&nullspace);CHKERRQ(ierr);
8251e07b27eSBarry Smith   if (!nullspace) return(0);
8261e07b27eSBarry Smith 
8271e07b27eSBarry Smith   ierr = PetscInfo(pc,"PCTelescope: generating nullspace (DMDA)\n");CHKERRQ(ierr);
8281e07b27eSBarry Smith   ctx = (PC_Telescope_DMDACtx*)sred->dm_ctx;
8291e07b27eSBarry Smith   subcomm = PetscSubcommChild(sred->psubcomm);
8301e07b27eSBarry Smith   ierr = MatNullSpaceGetVecs(nullspace,&has_const,&n,&vecs);CHKERRQ(ierr);
8311e07b27eSBarry Smith 
8321e07b27eSBarry Smith   if (isActiveRank(sred->psubcomm)) {
8331e07b27eSBarry Smith     /* create new vectors */
834e3acf2f7SBarry Smith     if (n) {
835e3acf2f7SBarry Smith       ierr = VecDuplicateVecs(sred->xred,n,&sub_vecs);CHKERRQ(ierr);
8361e07b27eSBarry Smith     }
8371e07b27eSBarry Smith   }
8381e07b27eSBarry Smith 
8391e07b27eSBarry Smith   /* copy entries */
8401e07b27eSBarry Smith   for (k=0; k<n; k++) {
8411e07b27eSBarry Smith     const PetscScalar *x_array;
8421e07b27eSBarry Smith     PetscScalar       *LA_sub_vec;
84313c30530SDave May     PetscInt          st,ed;
8441e07b27eSBarry Smith 
8451e07b27eSBarry Smith     /* permute vector into ordering associated with re-partitioned dmda */
8461e07b27eSBarry Smith     ierr = MatMultTranspose(ctx->permutation,vecs[k],ctx->xp);CHKERRQ(ierr);
8471e07b27eSBarry Smith 
8481e07b27eSBarry Smith     /* pull in vector x->xtmp */
8491e07b27eSBarry Smith     ierr = VecScatterBegin(sred->scatter,ctx->xp,sred->xtmp,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
8501e07b27eSBarry Smith     ierr = VecScatterEnd(sred->scatter,ctx->xp,sred->xtmp,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
8511e07b27eSBarry Smith 
8521e07b27eSBarry Smith     /* copy vector entires into xred */
8531e07b27eSBarry Smith     ierr = VecGetArrayRead(sred->xtmp,&x_array);CHKERRQ(ierr);
8541e07b27eSBarry Smith     if (sub_vecs[k]) {
8551e07b27eSBarry Smith       ierr = VecGetOwnershipRange(sub_vecs[k],&st,&ed);CHKERRQ(ierr);
8561e07b27eSBarry Smith       ierr = VecGetArray(sub_vecs[k],&LA_sub_vec);CHKERRQ(ierr);
8571e07b27eSBarry Smith       for (i=0; i<ed-st; i++) {
8581e07b27eSBarry Smith         LA_sub_vec[i] = x_array[i];
8591e07b27eSBarry Smith       }
8601e07b27eSBarry Smith       ierr = VecRestoreArray(sub_vecs[k],&LA_sub_vec);CHKERRQ(ierr);
8611e07b27eSBarry Smith     }
8621e07b27eSBarry Smith     ierr = VecRestoreArrayRead(sred->xtmp,&x_array);CHKERRQ(ierr);
8631e07b27eSBarry Smith   }
8641e07b27eSBarry Smith 
8651e07b27eSBarry Smith   if (isActiveRank(sred->psubcomm)) {
8661e07b27eSBarry Smith     /* create new nullspace for redundant object */
8671e07b27eSBarry Smith     ierr = MatNullSpaceCreate(subcomm,has_const,n,sub_vecs,&sub_nullspace);CHKERRQ(ierr);
868120bdd93SDave May     sub_nullspace->remove = nullspace->remove;
869120bdd93SDave May     sub_nullspace->rmctx = nullspace->rmctx;
8701e07b27eSBarry Smith 
8711e07b27eSBarry Smith     /* attach redundant nullspace to Bred */
8721e07b27eSBarry Smith     ierr = MatSetNullSpace(sub_mat,sub_nullspace);CHKERRQ(ierr);
873e3acf2f7SBarry Smith     ierr = VecDestroyVecs(n,&sub_vecs);CHKERRQ(ierr);
8741e07b27eSBarry Smith   }
8751e07b27eSBarry Smith   PetscFunctionReturn(0);
8761e07b27eSBarry Smith }
8771e07b27eSBarry Smith 
8781e07b27eSBarry Smith #undef __FUNCT__
8791e07b27eSBarry Smith #define __FUNCT__ "PCApply_Telescope_dmda"
8801e07b27eSBarry Smith PetscErrorCode PCApply_Telescope_dmda(PC pc,Vec x,Vec y)
8811e07b27eSBarry Smith {
8821e07b27eSBarry Smith   PC_Telescope      sred = (PC_Telescope)pc->data;
8831e07b27eSBarry Smith   PetscErrorCode    ierr;
8841e07b27eSBarry Smith   Mat               perm;
8851e07b27eSBarry Smith   Vec               xtmp,xp,xred,yred;
88613c30530SDave May   PetscInt          i,st,ed;
8871e07b27eSBarry Smith   VecScatter        scatter;
8881e07b27eSBarry Smith   PetscScalar       *array;
8891e07b27eSBarry Smith   const PetscScalar *x_array;
8901e07b27eSBarry Smith   PC_Telescope_DMDACtx *ctx;
8911e07b27eSBarry Smith 
8921e07b27eSBarry Smith   ctx = (PC_Telescope_DMDACtx*)sred->dm_ctx;
8931e07b27eSBarry Smith   xtmp    = sred->xtmp;
8941e07b27eSBarry Smith   scatter = sred->scatter;
8951e07b27eSBarry Smith   xred    = sred->xred;
8961e07b27eSBarry Smith   yred    = sred->yred;
8971e07b27eSBarry Smith   perm  = ctx->permutation;
8981e07b27eSBarry Smith   xp    = ctx->xp;
8991e07b27eSBarry Smith 
9001e07b27eSBarry Smith   PetscFunctionBegin;
90114c9fce5SDave May 
90214c9fce5SDave May   if (pc->nonzero_guess) {
90314c9fce5SDave May     ierr = PetscInfo(pc,"PCTelescopeDMDA: Scattering y for non-zero-initial guess\n");CHKERRQ(ierr);
90414c9fce5SDave May     /* permute vector into ordering associated with re-partitioned dmda */
90514c9fce5SDave May     ierr = MatMultTranspose(perm,y,xp);CHKERRQ(ierr);
90614c9fce5SDave May 
90714c9fce5SDave May     /* pull in vector x->xtmp */
90814c9fce5SDave May     ierr = VecScatterBegin(scatter,xp,xtmp,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
90914c9fce5SDave May     ierr = VecScatterEnd(scatter,xp,xtmp,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
91014c9fce5SDave May 
91114c9fce5SDave May     /* copy vector entires into xred */
91214c9fce5SDave May     ierr = VecGetArrayRead(xtmp,&x_array);CHKERRQ(ierr);
91314c9fce5SDave May     if (yred) {
91414c9fce5SDave May       PetscScalar *LA_yred;
91514c9fce5SDave May       ierr = VecGetOwnershipRange(yred,&st,&ed);CHKERRQ(ierr);
91614c9fce5SDave May       ierr = VecGetArray(yred,&LA_yred);CHKERRQ(ierr);
91714c9fce5SDave May       for (i=0; i<ed-st; i++) {
91814c9fce5SDave May         LA_yred[i] = x_array[i];
91914c9fce5SDave May       }
92014c9fce5SDave May       ierr = VecRestoreArray(yred,&LA_yred);CHKERRQ(ierr);
92114c9fce5SDave May     }
92214c9fce5SDave May     ierr = VecRestoreArrayRead(xtmp,&x_array);CHKERRQ(ierr);
92314c9fce5SDave May   }
92414c9fce5SDave May 
9251e07b27eSBarry Smith   /* permute vector into ordering associated with re-partitioned dmda */
9261e07b27eSBarry Smith   ierr = MatMultTranspose(perm,x,xp);CHKERRQ(ierr);
9271e07b27eSBarry Smith 
9281e07b27eSBarry Smith   /* pull in vector x->xtmp */
9291e07b27eSBarry Smith   ierr = VecScatterBegin(scatter,xp,xtmp,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
9301e07b27eSBarry Smith   ierr = VecScatterEnd(scatter,xp,xtmp,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
9311e07b27eSBarry Smith 
9321e07b27eSBarry Smith   /* copy vector entires into xred */
9331e07b27eSBarry Smith   ierr = VecGetArrayRead(xtmp,&x_array);CHKERRQ(ierr);
9341e07b27eSBarry Smith   if (xred) {
9351e07b27eSBarry Smith     PetscScalar *LA_xred;
9361e07b27eSBarry Smith     ierr = VecGetOwnershipRange(xred,&st,&ed);CHKERRQ(ierr);
9371e07b27eSBarry Smith 
9381e07b27eSBarry Smith     ierr = VecGetArray(xred,&LA_xred);CHKERRQ(ierr);
9391e07b27eSBarry Smith     for (i=0; i<ed-st; i++) {
9401e07b27eSBarry Smith       LA_xred[i] = x_array[i];
9411e07b27eSBarry Smith     }
9421e07b27eSBarry Smith     ierr = VecRestoreArray(xred,&LA_xred);CHKERRQ(ierr);
9431e07b27eSBarry Smith   }
9441e07b27eSBarry Smith   ierr = VecRestoreArrayRead(xtmp,&x_array);CHKERRQ(ierr);
9451e07b27eSBarry Smith 
9461e07b27eSBarry Smith   /* solve */
9471e07b27eSBarry Smith   if (isActiveRank(sred->psubcomm)) {
9481e07b27eSBarry Smith     ierr = KSPSolve(sred->ksp,xred,yred);CHKERRQ(ierr);
9491e07b27eSBarry Smith   }
9501e07b27eSBarry Smith 
9511e07b27eSBarry Smith   /* return vector */
9521e07b27eSBarry Smith   ierr = VecGetArray(xtmp,&array);CHKERRQ(ierr);
9531e07b27eSBarry Smith   if (yred) {
9541e07b27eSBarry Smith     const PetscScalar *LA_yred;
9551e07b27eSBarry Smith     ierr = VecGetOwnershipRange(yred,&st,&ed);CHKERRQ(ierr);
9561e07b27eSBarry Smith     ierr = VecGetArrayRead(yred,&LA_yred);CHKERRQ(ierr);
9571e07b27eSBarry Smith     for (i=0; i<ed-st; i++) {
9581e07b27eSBarry Smith       array[i] = LA_yred[i];
9591e07b27eSBarry Smith     }
9601e07b27eSBarry Smith     ierr = VecRestoreArrayRead(yred,&LA_yred);CHKERRQ(ierr);
9611e07b27eSBarry Smith   }
9621e07b27eSBarry Smith   ierr = VecRestoreArray(xtmp,&array);CHKERRQ(ierr);
9631e07b27eSBarry Smith   ierr = VecScatterBegin(scatter,xtmp,xp,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
9641e07b27eSBarry Smith   ierr = VecScatterEnd(scatter,xtmp,xp,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
9651e07b27eSBarry Smith   ierr = MatMult(perm,xp,y);CHKERRQ(ierr);
9661e07b27eSBarry Smith   PetscFunctionReturn(0);
9671e07b27eSBarry Smith }
9681e07b27eSBarry Smith 
9691e07b27eSBarry Smith #undef __FUNCT__
9701e07b27eSBarry Smith #define __FUNCT__ "PCReset_Telescope_dmda"
9711e07b27eSBarry Smith PetscErrorCode PCReset_Telescope_dmda(PC pc)
9721e07b27eSBarry Smith {
9731e07b27eSBarry Smith   PetscErrorCode       ierr;
9741e07b27eSBarry Smith   PC_Telescope         sred = (PC_Telescope)pc->data;
9751e07b27eSBarry Smith   PC_Telescope_DMDACtx *ctx;
9761e07b27eSBarry Smith 
9771e07b27eSBarry Smith   PetscFunctionBegin;
9781e07b27eSBarry Smith   ctx = (PC_Telescope_DMDACtx*)sred->dm_ctx;
9791e07b27eSBarry Smith   ierr = VecDestroy(&ctx->xp);CHKERRQ(ierr);
9801e07b27eSBarry Smith   ierr = MatDestroy(&ctx->permutation);CHKERRQ(ierr);
9811e07b27eSBarry Smith   ierr = DMDestroy(&ctx->dmrepart);CHKERRQ(ierr);
9821e07b27eSBarry Smith   ierr = PetscFree(ctx->range_i_re);CHKERRQ(ierr);
9831e07b27eSBarry Smith   ierr = PetscFree(ctx->range_j_re);CHKERRQ(ierr);
9841e07b27eSBarry Smith   ierr = PetscFree(ctx->range_k_re);CHKERRQ(ierr);
9851e07b27eSBarry Smith   ierr = PetscFree(ctx->start_i_re);CHKERRQ(ierr);
9861e07b27eSBarry Smith   ierr = PetscFree(ctx->start_j_re);CHKERRQ(ierr);
9871e07b27eSBarry Smith   ierr = PetscFree(ctx->start_k_re);CHKERRQ(ierr);
9881e07b27eSBarry Smith   PetscFunctionReturn(0);
9891e07b27eSBarry Smith }
9901e07b27eSBarry Smith 
9911e07b27eSBarry Smith #undef __FUNCT__
9921e07b27eSBarry Smith #define __FUNCT__ "DMView_DMDAShort_3d"
9931e07b27eSBarry Smith PetscErrorCode DMView_DMDAShort_3d(DM dm,PetscViewer v)
9941e07b27eSBarry Smith {
9951e07b27eSBarry Smith   PetscInt       M,N,P,m,n,p,ndof,nsw;
9961e07b27eSBarry Smith   MPI_Comm       comm;
9971e07b27eSBarry Smith   PetscMPIInt    size;
9981e07b27eSBarry Smith   const char*    prefix;
9991e07b27eSBarry Smith   PetscErrorCode ierr;
10001e07b27eSBarry Smith 
10011e07b27eSBarry Smith   PetscFunctionBegin;
10021e07b27eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)dm,&comm);CHKERRQ(ierr);
10031e07b27eSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
10041e07b27eSBarry Smith   ierr = DMGetOptionsPrefix(dm,&prefix);CHKERRQ(ierr);
10051e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,NULL,&M,&N,&P,&m,&n,&p,&ndof,&nsw,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
10061e07b27eSBarry Smith   if (prefix) {ierr = PetscViewerASCIIPrintf(v,"DMDA Object:    (%s)    %d MPI processes\n",prefix,size);CHKERRQ(ierr);}
10071e07b27eSBarry Smith   else {ierr = PetscViewerASCIIPrintf(v,"DMDA Object:    %d MPI processes\n",size);CHKERRQ(ierr);}
10081e07b27eSBarry Smith   ierr = PetscViewerASCIIPrintf(v,"  M %D N %D P %D m %D n %D p %D dof %D overlap %D\n",M,N,P,m,n,p,ndof,nsw);CHKERRQ(ierr);
10091e07b27eSBarry Smith   PetscFunctionReturn(0);
10101e07b27eSBarry Smith }
10111e07b27eSBarry Smith 
10121e07b27eSBarry Smith #undef __FUNCT__
10131e07b27eSBarry Smith #define __FUNCT__ "DMView_DMDAShort_2d"
10141e07b27eSBarry Smith PetscErrorCode DMView_DMDAShort_2d(DM dm,PetscViewer v)
10151e07b27eSBarry Smith {
10161e07b27eSBarry Smith   PetscInt       M,N,m,n,ndof,nsw;
10171e07b27eSBarry Smith   MPI_Comm       comm;
10181e07b27eSBarry Smith   PetscMPIInt    size;
10191e07b27eSBarry Smith   const char*    prefix;
10201e07b27eSBarry Smith   PetscErrorCode ierr;
10211e07b27eSBarry Smith 
10221e07b27eSBarry Smith   PetscFunctionBegin;
10231e07b27eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)dm,&comm);CHKERRQ(ierr);
10241e07b27eSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
10251e07b27eSBarry Smith   ierr = DMGetOptionsPrefix(dm,&prefix);CHKERRQ(ierr);
10261e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,NULL,&M,&N,NULL,&m,&n,NULL,&ndof,&nsw,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
10271e07b27eSBarry Smith   if (prefix) {PetscViewerASCIIPrintf(v,"DMDA Object:    (%s)    %d MPI processes\n",prefix,size);CHKERRQ(ierr);}
10281e07b27eSBarry Smith   else {ierr = PetscViewerASCIIPrintf(v,"DMDA Object:    %d MPI processes\n",size);CHKERRQ(ierr);}
10291e07b27eSBarry Smith   ierr = PetscViewerASCIIPrintf(v,"  M %D N %D m %D n %D dof %D overlap %D\n",M,N,m,n,ndof,nsw);CHKERRQ(ierr);
10301e07b27eSBarry Smith   PetscFunctionReturn(0);
10311e07b27eSBarry Smith }
10321e07b27eSBarry Smith 
10331e07b27eSBarry Smith #undef __FUNCT__
10341e07b27eSBarry Smith #define __FUNCT__ "DMView_DMDAShort"
10351e07b27eSBarry Smith PetscErrorCode DMView_DMDAShort(DM dm,PetscViewer v)
10361e07b27eSBarry Smith {
10371e07b27eSBarry Smith   PetscErrorCode ierr;
10381e07b27eSBarry Smith   PetscInt       dim;
10391e07b27eSBarry Smith 
10401e07b27eSBarry Smith   PetscFunctionBegin;
10411e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,&dim,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
10421e07b27eSBarry Smith   switch (dim) {
10431e07b27eSBarry Smith   case 2: ierr = DMView_DMDAShort_2d(dm,v);CHKERRQ(ierr);
10441e07b27eSBarry Smith     break;
10451e07b27eSBarry Smith   case 3: ierr = DMView_DMDAShort_3d(dm,v);CHKERRQ(ierr);
10461e07b27eSBarry Smith     break;
10471e07b27eSBarry Smith   }
10481e07b27eSBarry Smith   PetscFunctionReturn(0);
10491e07b27eSBarry Smith }
10501e07b27eSBarry Smith 
1051