xref: /petsc/src/ksp/pc/impls/telescope/telescope_dmda.c (revision 35928de7f7ca26a8de4874654cc856a8423a00bd)
11e07b27eSBarry Smith 
2120bdd93SDave May 
3120bdd93SDave May #include <petsc/private/matimpl.h>
41e07b27eSBarry Smith #include <petsc/private/pcimpl.h>
55e897e82SDave May #include <petsc/private/dmimpl.h>
61e07b27eSBarry Smith #include <petscksp.h>           /*I "petscksp.h" I*/
71e07b27eSBarry Smith #include <petscdm.h>
81e07b27eSBarry Smith #include <petscdmda.h>
91e07b27eSBarry Smith 
10575a0592SBarry Smith #include "../src/ksp/pc/impls/telescope/telescope.h"
111e07b27eSBarry Smith 
12bf00f589SPatrick Sanan static PetscBool  cited = PETSC_FALSE;
13bf00f589SPatrick Sanan static const char citation[] =
14bf00f589SPatrick Sanan "@inproceedings{MaySananRuppKnepleySmith2016,\n"
15bf00f589SPatrick Sanan "  title     = {Extreme-Scale Multigrid Components within PETSc},\n"
16bf00f589SPatrick Sanan "  author    = {Dave A. May and Patrick Sanan and Karl Rupp and Matthew G. Knepley and Barry F. Smith},\n"
17bf00f589SPatrick Sanan "  booktitle = {Proceedings of the Platform for Advanced Scientific Computing Conference},\n"
18bf00f589SPatrick Sanan "  series    = {PASC '16},\n"
19bf00f589SPatrick Sanan "  isbn      = {978-1-4503-4126-4},\n"
20bf00f589SPatrick Sanan "  location  = {Lausanne, Switzerland},\n"
21bf00f589SPatrick Sanan "  pages     = {5:1--5:12},\n"
22bf00f589SPatrick Sanan "  articleno = {5},\n"
23bf00f589SPatrick Sanan "  numpages  = {12},\n"
24bf00f589SPatrick Sanan "  url       = {http://doi.acm.org/10.1145/2929908.2929913},\n"
25bf00f589SPatrick Sanan "  doi       = {10.1145/2929908.2929913},\n"
26bf00f589SPatrick Sanan "  acmid     = {2929913},\n"
27bf00f589SPatrick Sanan "  publisher = {ACM},\n"
28bf00f589SPatrick Sanan "  address   = {New York, NY, USA},\n"
29bf00f589SPatrick Sanan "  keywords  = {GPU, HPC, agglomeration, coarse-level solver, multigrid, parallel computing, preconditioning},\n"
30bf00f589SPatrick Sanan "  year      = {2016}\n"
31bf00f589SPatrick Sanan "}\n";
32bf00f589SPatrick Sanan 
331e07b27eSBarry Smith PetscErrorCode _DMDADetermineRankFromGlobalIJK(PetscInt dim,PetscInt i,PetscInt j,PetscInt k,
341e07b27eSBarry Smith                                                PetscInt Mp,PetscInt Np,PetscInt Pp,
351e07b27eSBarry Smith                                                PetscInt start_i[],PetscInt start_j[],PetscInt start_k[],
361e07b27eSBarry Smith                                                PetscInt span_i[],PetscInt span_j[],PetscInt span_k[],
371e07b27eSBarry Smith                                                PetscMPIInt *_pi,PetscMPIInt *_pj,PetscMPIInt *_pk,PetscMPIInt *rank_re)
381e07b27eSBarry Smith {
391e07b27eSBarry Smith   PetscInt pi,pj,pk,n;
401e07b27eSBarry Smith 
411e07b27eSBarry Smith   PetscFunctionBegin;
42137d0469SJed Brown   *rank_re = -1;
43137d0469SJed Brown   if (_pi) *_pi = -1;
44137d0469SJed Brown   if (_pj) *_pj = -1;
45137d0469SJed Brown   if (_pk) *_pk = -1;
461e07b27eSBarry Smith   pi = pj = pk = -1;
471e07b27eSBarry Smith   if (_pi) {
481e07b27eSBarry Smith     for (n=0; n<Mp; n++) {
491e07b27eSBarry Smith       if ( (i >= start_i[n]) && (i < start_i[n]+span_i[n]) ) {
501e07b27eSBarry Smith         pi = n;
511e07b27eSBarry Smith         break;
521e07b27eSBarry Smith       }
531e07b27eSBarry Smith     }
541e07b27eSBarry Smith     if (pi == -1) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmda-ijk] pi cannot be determined : range %D, val %D",Mp,i);
551e07b27eSBarry Smith     *_pi = pi;
561e07b27eSBarry Smith   }
571e07b27eSBarry Smith 
581e07b27eSBarry Smith   if (_pj) {
591e07b27eSBarry Smith     for (n=0; n<Np; n++) {
601e07b27eSBarry Smith       if ( (j >= start_j[n]) && (j < start_j[n]+span_j[n]) ) {
611e07b27eSBarry Smith         pj = n;
621e07b27eSBarry Smith         break;
631e07b27eSBarry Smith       }
641e07b27eSBarry Smith     }
651e07b27eSBarry Smith     if (pj == -1) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmda-ijk] pj cannot be determined : range %D, val %D",Np,j);
661e07b27eSBarry Smith     *_pj = pj;
671e07b27eSBarry Smith   }
681e07b27eSBarry Smith 
691e07b27eSBarry Smith   if (_pk) {
701e07b27eSBarry Smith     for (n=0; n<Pp; n++) {
711e07b27eSBarry Smith       if ( (k >= start_k[n]) && (k < start_k[n]+span_k[n]) ) {
721e07b27eSBarry Smith         pk = n;
731e07b27eSBarry Smith         break;
741e07b27eSBarry Smith       }
751e07b27eSBarry Smith     }
761e07b27eSBarry Smith     if (pk == -1) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmda-ijk] pk cannot be determined : range %D, val %D",Pp,k);
771e07b27eSBarry Smith     *_pk = pk;
781e07b27eSBarry Smith   }
791e07b27eSBarry Smith 
801e07b27eSBarry Smith   switch (dim) {
811e07b27eSBarry Smith     case 1:
821e07b27eSBarry Smith       *rank_re = pi;
831e07b27eSBarry Smith       break;
841e07b27eSBarry Smith     case 2:
851e07b27eSBarry Smith       *rank_re = pi + pj * Mp;
861e07b27eSBarry Smith       break;
871e07b27eSBarry Smith     case 3:
881e07b27eSBarry Smith       *rank_re = pi + pj * Mp + pk * (Mp*Np);
891e07b27eSBarry Smith       break;
901e07b27eSBarry Smith   }
911e07b27eSBarry Smith   PetscFunctionReturn(0);
921e07b27eSBarry Smith }
931e07b27eSBarry Smith 
941e07b27eSBarry Smith PetscErrorCode _DMDADetermineGlobalS0(PetscInt dim,PetscMPIInt rank_re,PetscInt Mp_re,PetscInt Np_re,PetscInt Pp_re,
951e07b27eSBarry Smith                                       PetscInt range_i_re[],PetscInt range_j_re[],PetscInt range_k_re[],PetscInt *s0)
961e07b27eSBarry Smith {
97c6a0d831SBarry Smith   PetscInt i,j,k,start_IJK = 0;
981e07b27eSBarry Smith   PetscInt rank_ijk;
991e07b27eSBarry Smith 
1001e07b27eSBarry Smith   PetscFunctionBegin;
1011e07b27eSBarry Smith   switch (dim) {
1021e07b27eSBarry Smith     case 1:
1031e07b27eSBarry Smith       for (i=0; i<Mp_re; i++) {
1041e07b27eSBarry Smith         rank_ijk = i;
1051e07b27eSBarry Smith         if (rank_ijk < rank_re) {
1061e07b27eSBarry Smith           start_IJK += range_i_re[i];
1071e07b27eSBarry Smith         }
1081e07b27eSBarry Smith       }
1091e07b27eSBarry Smith       break;
1101e07b27eSBarry Smith     case 2:
1111e07b27eSBarry Smith       for (j=0; j<Np_re; j++) {
1121e07b27eSBarry Smith         for (i=0; i<Mp_re; i++) {
1131e07b27eSBarry Smith           rank_ijk = i + j*Mp_re;
1141e07b27eSBarry Smith           if (rank_ijk < rank_re) {
1151e07b27eSBarry Smith             start_IJK += range_i_re[i]*range_j_re[j];
1161e07b27eSBarry Smith           }
1171e07b27eSBarry Smith         }
1181e07b27eSBarry Smith       }
1191e07b27eSBarry Smith       break;
1201e07b27eSBarry Smith     case 3:
1211e07b27eSBarry Smith       for (k=0; k<Pp_re; k++) {
1221e07b27eSBarry Smith         for (j=0; j<Np_re; j++) {
1231e07b27eSBarry Smith           for (i=0; i<Mp_re; i++) {
1241e07b27eSBarry Smith             rank_ijk = i + j*Mp_re + k*Mp_re*Np_re;
1251e07b27eSBarry Smith             if (rank_ijk < rank_re) {
1261e07b27eSBarry Smith               start_IJK += range_i_re[i]*range_j_re[j]*range_k_re[k];
1271e07b27eSBarry Smith             }
1281e07b27eSBarry Smith           }
1291e07b27eSBarry Smith         }
1301e07b27eSBarry Smith       }
1311e07b27eSBarry Smith       break;
1321e07b27eSBarry Smith   }
1331e07b27eSBarry Smith   *s0 = start_IJK;
1341e07b27eSBarry Smith   PetscFunctionReturn(0);
1351e07b27eSBarry Smith }
1361e07b27eSBarry Smith 
1371e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda_repart_coors2d(PetscSubcomm psubcomm,DM dm,DM subdm)
1381e07b27eSBarry Smith {
1391e07b27eSBarry Smith   PetscErrorCode ierr;
1401e07b27eSBarry Smith   DM             cdm;
1411e07b27eSBarry Smith   Vec            coor,coor_natural,perm_coors;
1421e07b27eSBarry Smith   PetscInt       i,j,si,sj,ni,nj,M,N,Ml,Nl,c,nidx;
1431e07b27eSBarry Smith   PetscInt       *fine_indices;
1441e07b27eSBarry Smith   IS             is_fine,is_local;
1451e07b27eSBarry Smith   VecScatter     sctx;
1461e07b27eSBarry Smith 
1471e07b27eSBarry Smith   PetscFunctionBegin;
1481e07b27eSBarry Smith   ierr = DMGetCoordinates(dm,&coor);CHKERRQ(ierr);
1491e07b27eSBarry Smith   if (!coor) return(0);
1501e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
1511e07b27eSBarry Smith     ierr = DMDASetUniformCoordinates(subdm,0.0,1.0,0.0,1.0,0.0,1.0);CHKERRQ(ierr);
1521e07b27eSBarry Smith   }
1531e07b27eSBarry Smith   /* Get the coordinate vector from the distributed array */
1541e07b27eSBarry Smith   ierr = DMGetCoordinateDM(dm,&cdm);CHKERRQ(ierr);
1551e07b27eSBarry Smith   ierr = DMDACreateNaturalVector(cdm,&coor_natural);CHKERRQ(ierr);
1561e07b27eSBarry Smith 
1571e07b27eSBarry Smith   ierr = DMDAGlobalToNaturalBegin(cdm,coor,INSERT_VALUES,coor_natural);CHKERRQ(ierr);
1581e07b27eSBarry Smith   ierr = DMDAGlobalToNaturalEnd(cdm,coor,INSERT_VALUES,coor_natural);CHKERRQ(ierr);
1591e07b27eSBarry Smith 
1601e07b27eSBarry Smith   /* get indices of the guys I want to grab */
1611e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,NULL,&M,&N,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
1621e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
1631e07b27eSBarry Smith     ierr = DMDAGetCorners(subdm,&si,&sj,NULL,&ni,&nj,NULL);CHKERRQ(ierr);
16415dd08bcSBarry Smith     Ml = ni;
16515dd08bcSBarry Smith     Nl = nj;
1661e07b27eSBarry Smith   } else {
167c41e779fSDave May     si = sj = 0;
168c41e779fSDave May     ni = nj = 0;
1693ac26c5eSBarry Smith     Ml = Nl = 0;
1701e07b27eSBarry Smith   }
1711e07b27eSBarry Smith 
172e3acf2f7SBarry Smith   ierr = PetscMalloc1(Ml*Nl*2,&fine_indices);CHKERRQ(ierr);
1731e07b27eSBarry Smith   c = 0;
1741e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
1751e07b27eSBarry Smith     for (j=sj; j<sj+nj; j++) {
1761e07b27eSBarry Smith       for (i=si; i<si+ni; i++) {
1771e07b27eSBarry Smith         nidx = (i) + (j)*M;
1781e07b27eSBarry Smith         fine_indices[c  ] = 2 * nidx     ;
1791e07b27eSBarry Smith         fine_indices[c+1] = 2 * nidx + 1 ;
1801e07b27eSBarry Smith         c = c + 2;
1811e07b27eSBarry Smith       }
1821e07b27eSBarry Smith     }
183c2be2c73SBarry Smith     if (c != Ml*Nl*2) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_PLIB,"c %D should equal 2 * Ml %D * Nl %D",c,Ml,Nl);
1841e07b27eSBarry Smith   }
1851e07b27eSBarry Smith 
1861e07b27eSBarry Smith   /* generate scatter */
1871e07b27eSBarry Smith   ierr = ISCreateGeneral(PetscObjectComm((PetscObject)dm),Ml*Nl*2,fine_indices,PETSC_USE_POINTER,&is_fine);CHKERRQ(ierr);
1881e07b27eSBarry Smith   ierr = ISCreateStride(PETSC_COMM_SELF,Ml*Nl*2,0,1,&is_local);CHKERRQ(ierr);
1891e07b27eSBarry Smith 
1901e07b27eSBarry Smith   /* scatter */
1911e07b27eSBarry Smith   ierr = VecCreate(PETSC_COMM_SELF,&perm_coors);CHKERRQ(ierr);
1921e07b27eSBarry Smith   ierr = VecSetSizes(perm_coors,PETSC_DECIDE,Ml*Nl*2);CHKERRQ(ierr);
1931e07b27eSBarry Smith   ierr = VecSetType(perm_coors,VECSEQ);CHKERRQ(ierr);
1941e07b27eSBarry Smith 
195*35928de7SBarry Smith   ierr = VecScatterCreateWithData(coor_natural,is_fine,perm_coors,is_local,&sctx);CHKERRQ(ierr);
1961e07b27eSBarry Smith   ierr = VecScatterBegin(sctx,coor_natural,perm_coors,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1971e07b27eSBarry Smith   ierr = VecScatterEnd(  sctx,coor_natural,perm_coors,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1981e07b27eSBarry Smith   /* access */
1991e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
2001e07b27eSBarry Smith     Vec               _coors;
2011e07b27eSBarry Smith     const PetscScalar *LA_perm;
2021e07b27eSBarry Smith     PetscScalar       *LA_coors;
2031e07b27eSBarry Smith 
2041e07b27eSBarry Smith     ierr = DMGetCoordinates(subdm,&_coors);CHKERRQ(ierr);
2051e07b27eSBarry Smith     ierr = VecGetArrayRead(perm_coors,&LA_perm);CHKERRQ(ierr);
2061e07b27eSBarry Smith     ierr = VecGetArray(_coors,&LA_coors);CHKERRQ(ierr);
2071e07b27eSBarry Smith     for (i=0; i<Ml*Nl*2; i++) {
2081e07b27eSBarry Smith       LA_coors[i] = LA_perm[i];
2091e07b27eSBarry Smith     }
2101e07b27eSBarry Smith     ierr = VecRestoreArray(_coors,&LA_coors);CHKERRQ(ierr);
2111e07b27eSBarry Smith     ierr = VecRestoreArrayRead(perm_coors,&LA_perm);CHKERRQ(ierr);
2121e07b27eSBarry Smith   }
2131e07b27eSBarry Smith 
2141e07b27eSBarry Smith   /* update local coords */
2151e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
2161e07b27eSBarry Smith     DM  _dmc;
2171e07b27eSBarry Smith     Vec _coors,_coors_local;
2181e07b27eSBarry Smith     ierr = DMGetCoordinateDM(subdm,&_dmc);CHKERRQ(ierr);
2191e07b27eSBarry Smith     ierr = DMGetCoordinates(subdm,&_coors);CHKERRQ(ierr);
2201e07b27eSBarry Smith     ierr = DMGetCoordinatesLocal(subdm,&_coors_local);CHKERRQ(ierr);
2211e07b27eSBarry Smith     ierr = DMGlobalToLocalBegin(_dmc,_coors,INSERT_VALUES,_coors_local);CHKERRQ(ierr);
2221e07b27eSBarry Smith     ierr = DMGlobalToLocalEnd(_dmc,_coors,INSERT_VALUES,_coors_local);CHKERRQ(ierr);
2231e07b27eSBarry Smith   }
2241e07b27eSBarry Smith   ierr = VecScatterDestroy(&sctx);CHKERRQ(ierr);
2251e07b27eSBarry Smith   ierr = ISDestroy(&is_fine);CHKERRQ(ierr);
2261e07b27eSBarry Smith   ierr = PetscFree(fine_indices);CHKERRQ(ierr);
2271e07b27eSBarry Smith   ierr = ISDestroy(&is_local);CHKERRQ(ierr);
2281e07b27eSBarry Smith   ierr = VecDestroy(&perm_coors);CHKERRQ(ierr);
2291e07b27eSBarry Smith   ierr = VecDestroy(&coor_natural);CHKERRQ(ierr);
2301e07b27eSBarry Smith   PetscFunctionReturn(0);
2311e07b27eSBarry Smith }
2321e07b27eSBarry Smith 
2331e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda_repart_coors3d(PetscSubcomm psubcomm,DM dm,DM subdm)
2341e07b27eSBarry Smith {
2351e07b27eSBarry Smith   PetscErrorCode ierr;
2361e07b27eSBarry Smith   DM             cdm;
2371e07b27eSBarry Smith   Vec            coor,coor_natural,perm_coors;
2381e07b27eSBarry Smith   PetscInt       i,j,k,si,sj,sk,ni,nj,nk,M,N,P,Ml,Nl,Pl,c,nidx;
2391e07b27eSBarry Smith   PetscInt       *fine_indices;
2401e07b27eSBarry Smith   IS             is_fine,is_local;
2411e07b27eSBarry Smith   VecScatter     sctx;
2421e07b27eSBarry Smith 
2431e07b27eSBarry Smith   PetscFunctionBegin;
2441e07b27eSBarry Smith   ierr = DMGetCoordinates(dm,&coor);CHKERRQ(ierr);
2451e07b27eSBarry Smith   if (!coor) PetscFunctionReturn(0);
2461e07b27eSBarry Smith 
2471e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
2481e07b27eSBarry Smith     ierr = DMDASetUniformCoordinates(subdm,0.0,1.0,0.0,1.0,0.0,1.0);CHKERRQ(ierr);
2491e07b27eSBarry Smith   }
2501e07b27eSBarry Smith 
2511e07b27eSBarry Smith   /* Get the coordinate vector from the distributed array */
2521e07b27eSBarry Smith   ierr = DMGetCoordinateDM(dm,&cdm);CHKERRQ(ierr);
2531e07b27eSBarry Smith   ierr = DMDACreateNaturalVector(cdm,&coor_natural);CHKERRQ(ierr);
2541e07b27eSBarry Smith   ierr = DMDAGlobalToNaturalBegin(cdm,coor,INSERT_VALUES,coor_natural);CHKERRQ(ierr);
2551e07b27eSBarry Smith   ierr = DMDAGlobalToNaturalEnd(cdm,coor,INSERT_VALUES,coor_natural);CHKERRQ(ierr);
2561e07b27eSBarry Smith 
2571e07b27eSBarry Smith   /* get indices of the guys I want to grab */
2581e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,NULL,&M,&N,&P,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
2591e07b27eSBarry Smith 
2601e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
2611e07b27eSBarry Smith     ierr = DMDAGetCorners(subdm,&si,&sj,&sk,&ni,&nj,&nk);CHKERRQ(ierr);
262553d0ae9SBarry Smith     Ml = ni;
263553d0ae9SBarry Smith     Nl = nj;
264553d0ae9SBarry Smith     Pl = nk;
2651e07b27eSBarry Smith   } else {
266c41e779fSDave May     si = sj = sk = 0;
267c41e779fSDave May     ni = nj = nk = 0;
2683ac26c5eSBarry Smith     Ml = Nl = Pl = 0;
2691e07b27eSBarry Smith   }
2701e07b27eSBarry Smith 
271e3acf2f7SBarry Smith   ierr = PetscMalloc1(Ml*Nl*Pl*3,&fine_indices);CHKERRQ(ierr);
2721e07b27eSBarry Smith 
2731e07b27eSBarry Smith   c = 0;
2741e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
2751e07b27eSBarry Smith     for (k=sk; k<sk+nk; k++) {
2761e07b27eSBarry Smith       for (j=sj; j<sj+nj; j++) {
2771e07b27eSBarry Smith         for (i=si; i<si+ni; i++) {
2781e07b27eSBarry Smith           nidx = (i) + (j)*M + (k)*M*N;
2791e07b27eSBarry Smith           fine_indices[c  ] = 3 * nidx     ;
2801e07b27eSBarry Smith           fine_indices[c+1] = 3 * nidx + 1 ;
2811e07b27eSBarry Smith           fine_indices[c+2] = 3 * nidx + 2 ;
2821e07b27eSBarry Smith           c = c + 3;
2831e07b27eSBarry Smith         }
2841e07b27eSBarry Smith       }
2851e07b27eSBarry Smith     }
2861e07b27eSBarry Smith   }
2871e07b27eSBarry Smith 
2881e07b27eSBarry Smith   /* generate scatter */
2891e07b27eSBarry Smith   ierr = ISCreateGeneral(PetscObjectComm((PetscObject)dm),Ml*Nl*Pl*3,fine_indices,PETSC_USE_POINTER,&is_fine);CHKERRQ(ierr);
2901e07b27eSBarry Smith   ierr = ISCreateStride(PETSC_COMM_SELF,Ml*Nl*Pl*3,0,1,&is_local);CHKERRQ(ierr);
2911e07b27eSBarry Smith 
2921e07b27eSBarry Smith   /* scatter */
2931e07b27eSBarry Smith   ierr = VecCreate(PETSC_COMM_SELF,&perm_coors);CHKERRQ(ierr);
2941e07b27eSBarry Smith   ierr = VecSetSizes(perm_coors,PETSC_DECIDE,Ml*Nl*Pl*3);CHKERRQ(ierr);
2951e07b27eSBarry Smith   ierr = VecSetType(perm_coors,VECSEQ);CHKERRQ(ierr);
296*35928de7SBarry Smith   ierr = VecScatterCreateWithData(coor_natural,is_fine,perm_coors,is_local,&sctx);CHKERRQ(ierr);
2971e07b27eSBarry Smith   ierr = VecScatterBegin(sctx,coor_natural,perm_coors,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2981e07b27eSBarry Smith   ierr = VecScatterEnd(  sctx,coor_natural,perm_coors,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2991e07b27eSBarry Smith 
3001e07b27eSBarry Smith   /* access */
3011e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
3021e07b27eSBarry Smith     Vec               _coors;
3031e07b27eSBarry Smith     const PetscScalar *LA_perm;
3041e07b27eSBarry Smith     PetscScalar       *LA_coors;
3051e07b27eSBarry Smith 
3061e07b27eSBarry Smith     ierr = DMGetCoordinates(subdm,&_coors);CHKERRQ(ierr);
3071e07b27eSBarry Smith     ierr = VecGetArrayRead(perm_coors,&LA_perm);CHKERRQ(ierr);
3081e07b27eSBarry Smith     ierr = VecGetArray(_coors,&LA_coors);CHKERRQ(ierr);
3091e07b27eSBarry Smith     for (i=0; i<Ml*Nl*Pl*3; i++) {
3101e07b27eSBarry Smith       LA_coors[i] = LA_perm[i];
3111e07b27eSBarry Smith     }
3121e07b27eSBarry Smith     ierr = VecRestoreArray(_coors,&LA_coors);CHKERRQ(ierr);
3131e07b27eSBarry Smith     ierr = VecRestoreArrayRead(perm_coors,&LA_perm);CHKERRQ(ierr);
3141e07b27eSBarry Smith   }
3151e07b27eSBarry Smith 
3161e07b27eSBarry Smith   /* update local coords */
3171e07b27eSBarry Smith   if (isActiveRank(psubcomm)) {
3181e07b27eSBarry Smith     DM  _dmc;
3191e07b27eSBarry Smith     Vec _coors,_coors_local;
3201e07b27eSBarry Smith 
3211e07b27eSBarry Smith     ierr = DMGetCoordinateDM(subdm,&_dmc);CHKERRQ(ierr);
3221e07b27eSBarry Smith     ierr = DMGetCoordinates(subdm,&_coors);CHKERRQ(ierr);
3231e07b27eSBarry Smith     ierr = DMGetCoordinatesLocal(subdm,&_coors_local);CHKERRQ(ierr);
3241e07b27eSBarry Smith     ierr = DMGlobalToLocalBegin(_dmc,_coors,INSERT_VALUES,_coors_local);CHKERRQ(ierr);
3251e07b27eSBarry Smith     ierr = DMGlobalToLocalEnd(_dmc,_coors,INSERT_VALUES,_coors_local);CHKERRQ(ierr);
3261e07b27eSBarry Smith   }
3271e07b27eSBarry Smith 
3281e07b27eSBarry Smith   ierr = VecScatterDestroy(&sctx);CHKERRQ(ierr);
3291e07b27eSBarry Smith   ierr = ISDestroy(&is_fine);CHKERRQ(ierr);
3301e07b27eSBarry Smith   ierr = PetscFree(fine_indices);CHKERRQ(ierr);
3311e07b27eSBarry Smith   ierr = ISDestroy(&is_local);CHKERRQ(ierr);
3321e07b27eSBarry Smith   ierr = VecDestroy(&perm_coors);CHKERRQ(ierr);
3331e07b27eSBarry Smith   ierr = VecDestroy(&coor_natural);CHKERRQ(ierr);
3341e07b27eSBarry Smith   PetscFunctionReturn(0);
3351e07b27eSBarry Smith }
3361e07b27eSBarry Smith 
3371e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda_repart_coors(PC pc,PC_Telescope sred,PC_Telescope_DMDACtx *ctx)
3381e07b27eSBarry Smith {
3391e07b27eSBarry Smith   PetscInt       dim;
3401e07b27eSBarry Smith   DM             dm,subdm;
3411e07b27eSBarry Smith   PetscSubcomm   psubcomm;
3421e07b27eSBarry Smith   MPI_Comm       comm;
3431e07b27eSBarry Smith   Vec            coor;
3441e07b27eSBarry Smith   PetscErrorCode ierr;
3451e07b27eSBarry Smith 
3461e07b27eSBarry Smith   PetscFunctionBegin;
3471e07b27eSBarry Smith   ierr = PCGetDM(pc,&dm);CHKERRQ(ierr);
3481e07b27eSBarry Smith   ierr = DMGetCoordinates(dm,&coor);CHKERRQ(ierr);
3491e07b27eSBarry Smith   if (!coor) PetscFunctionReturn(0);
3501e07b27eSBarry Smith   psubcomm = sred->psubcomm;
3511e07b27eSBarry Smith   comm = PetscSubcommParent(psubcomm);
3521e07b27eSBarry Smith   subdm = ctx->dmrepart;
3531e07b27eSBarry Smith 
3541e07b27eSBarry Smith 
3551e07b27eSBarry Smith   ierr = PetscInfo(pc,"PCTelescope: setting up the coordinates (DMDA)\n");CHKERRQ(ierr);
3561e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,&dim,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
3571e07b27eSBarry Smith   switch (dim) {
3581e07b27eSBarry Smith   case 1: SETERRQ(comm,PETSC_ERR_SUP,"Telescope: DMDA (1D) repartitioning not provided");
3591e07b27eSBarry Smith     break;
3601e07b27eSBarry Smith   case 2: PCTelescopeSetUp_dmda_repart_coors2d(psubcomm,dm,subdm);
3611e07b27eSBarry Smith     break;
3621e07b27eSBarry Smith   case 3: PCTelescopeSetUp_dmda_repart_coors3d(psubcomm,dm,subdm);
3631e07b27eSBarry Smith     break;
3641e07b27eSBarry Smith   }
3651e07b27eSBarry Smith   PetscFunctionReturn(0);
3661e07b27eSBarry Smith }
3671e07b27eSBarry Smith 
3681e07b27eSBarry Smith /* setup repartitioned dm */
3691e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda_repart(PC pc,PC_Telescope sred,PC_Telescope_DMDACtx *ctx)
3701e07b27eSBarry Smith {
3711e07b27eSBarry Smith   PetscErrorCode  ierr;
3721e07b27eSBarry Smith   DM              dm;
3731e07b27eSBarry Smith   PetscInt        dim,nx,ny,nz,ndof,nsw,sum,k;
3741e07b27eSBarry Smith   DMBoundaryType  bx,by,bz;
3751e07b27eSBarry Smith   DMDAStencilType stencil;
3761e07b27eSBarry Smith   const PetscInt  *_range_i_re;
3771e07b27eSBarry Smith   const PetscInt  *_range_j_re;
3781e07b27eSBarry Smith   const PetscInt  *_range_k_re;
3791e07b27eSBarry Smith   DMDAInterpolationType itype;
3801e07b27eSBarry Smith   PetscInt              refine_x,refine_y,refine_z;
3811e07b27eSBarry Smith   MPI_Comm              comm,subcomm;
3821e07b27eSBarry Smith   const char            *prefix;
3831e07b27eSBarry Smith 
3841e07b27eSBarry Smith   PetscFunctionBegin;
3851e07b27eSBarry Smith   comm = PetscSubcommParent(sred->psubcomm);
3861e07b27eSBarry Smith   subcomm = PetscSubcommChild(sred->psubcomm);
3871e07b27eSBarry Smith   ierr = PCGetDM(pc,&dm);CHKERRQ(ierr);
3881e07b27eSBarry Smith 
3891e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,&dim,&nx,&ny,&nz,NULL,NULL,NULL,&ndof,&nsw,&bx,&by,&bz,&stencil);CHKERRQ(ierr);
3901e07b27eSBarry Smith   ierr = DMDAGetInterpolationType(dm,&itype);CHKERRQ(ierr);
3911e07b27eSBarry Smith   ierr = DMDAGetRefinementFactor(dm,&refine_x,&refine_y,&refine_z);CHKERRQ(ierr);
3921e07b27eSBarry Smith 
3931e07b27eSBarry Smith   ctx->dmrepart = NULL;
3941e07b27eSBarry Smith   _range_i_re = _range_j_re = _range_k_re = NULL;
3951e07b27eSBarry Smith   /* Create DMDA on the child communicator */
3961e07b27eSBarry Smith   if (isActiveRank(sred->psubcomm)) {
3971e07b27eSBarry Smith     switch (dim) {
3981e07b27eSBarry Smith     case 1:
3991e07b27eSBarry Smith       ierr = PetscInfo(pc,"PCTelescope: setting up the DMDA on comm subset (1D)\n");CHKERRQ(ierr);
4001e07b27eSBarry Smith       /*ierr = DMDACreate1d(subcomm,bx,nx,ndof,nsw,NULL,&ctx->dmrepart);CHKERRQ(ierr);*/
4011e07b27eSBarry Smith       ny = nz = 1;
4021e07b27eSBarry Smith       by = bz = DM_BOUNDARY_NONE;
4031e07b27eSBarry Smith       break;
4041e07b27eSBarry Smith     case 2:
4051e07b27eSBarry Smith       ierr = PetscInfo(pc,"PCTelescope: setting up the DMDA on comm subset (2D)\n");CHKERRQ(ierr);
4061e07b27eSBarry Smith       /*ierr = DMDACreate2d(subcomm,bx,by,stencil,nx,ny, PETSC_DECIDE,PETSC_DECIDE, ndof,nsw, NULL,NULL,&ctx->dmrepart);CHKERRQ(ierr);*/
4071e07b27eSBarry Smith       nz = 1;
4081e07b27eSBarry Smith       bz = DM_BOUNDARY_NONE;
4091e07b27eSBarry Smith       break;
4101e07b27eSBarry Smith     case 3:
4111e07b27eSBarry Smith       ierr = PetscInfo(pc,"PCTelescope: setting up the DMDA on comm subset (3D)\n");CHKERRQ(ierr);
4121e07b27eSBarry Smith       /*ierr = DMDACreate3d(subcomm,bx,by,bz,stencil,nx,ny,nz, PETSC_DECIDE,PETSC_DECIDE,PETSC_DECIDE, ndof,nsw, NULL,NULL,NULL,&ctx->dmrepart);CHKERRQ(ierr);*/
4131e07b27eSBarry Smith       break;
4141e07b27eSBarry Smith     }
4151e07b27eSBarry Smith     /*
4161e07b27eSBarry Smith      The API DMDACreate1d(), DMDACreate2d(), DMDACreate3d() does not allow us to set/append
4171e07b27eSBarry Smith      a unique option prefix for the DM, thus I prefer to expose the contents of these API's here.
4181e07b27eSBarry Smith      This allows users to control the partitioning of the subDM.
4191e07b27eSBarry Smith     */
4201e07b27eSBarry Smith     ierr = DMDACreate(subcomm,&ctx->dmrepart);CHKERRQ(ierr);
4211e07b27eSBarry Smith     /* Set unique option prefix name */
4227c5279cbSDave May     ierr = KSPGetOptionsPrefix(sred->ksp,&prefix);CHKERRQ(ierr);
4231e07b27eSBarry Smith     ierr = DMSetOptionsPrefix(ctx->dmrepart,prefix);CHKERRQ(ierr);
4241e07b27eSBarry Smith     ierr = DMAppendOptionsPrefix(ctx->dmrepart,"repart_");CHKERRQ(ierr);
4251e07b27eSBarry Smith     /* standard setup from DMDACreate{1,2,3}d() */
4261e07b27eSBarry Smith     ierr = DMSetDimension(ctx->dmrepart,dim);CHKERRQ(ierr);
4271e07b27eSBarry Smith     ierr = DMDASetSizes(ctx->dmrepart,nx,ny,nz);CHKERRQ(ierr);
4281e07b27eSBarry Smith     ierr = DMDASetNumProcs(ctx->dmrepart,PETSC_DECIDE,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
4291e07b27eSBarry Smith     ierr = DMDASetBoundaryType(ctx->dmrepart,bx,by,bz);CHKERRQ(ierr);
4301e07b27eSBarry Smith     ierr = DMDASetDof(ctx->dmrepart,ndof);CHKERRQ(ierr);
4311e07b27eSBarry Smith     ierr = DMDASetStencilType(ctx->dmrepart,stencil);CHKERRQ(ierr);
4321e07b27eSBarry Smith     ierr = DMDASetStencilWidth(ctx->dmrepart,nsw);CHKERRQ(ierr);
4331e07b27eSBarry Smith     ierr = DMDASetOwnershipRanges(ctx->dmrepart,NULL,NULL,NULL);CHKERRQ(ierr);
4341e07b27eSBarry Smith     ierr = DMSetFromOptions(ctx->dmrepart);CHKERRQ(ierr);
4351e07b27eSBarry Smith     ierr = DMSetUp(ctx->dmrepart);CHKERRQ(ierr);
4361e07b27eSBarry Smith     /* Set refinement factors and interpolation type from the partent */
4371e07b27eSBarry Smith     ierr = DMDASetRefinementFactor(ctx->dmrepart,refine_x,refine_y,refine_z);CHKERRQ(ierr);
4381e07b27eSBarry Smith     ierr = DMDASetInterpolationType(ctx->dmrepart,itype);CHKERRQ(ierr);
4391e07b27eSBarry Smith 
4401e07b27eSBarry Smith     ierr = DMDAGetInfo(ctx->dmrepart,NULL,NULL,NULL,NULL,&ctx->Mp_re,&ctx->Np_re,&ctx->Pp_re,NULL,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
4411e07b27eSBarry Smith     ierr = DMDAGetOwnershipRanges(ctx->dmrepart,&_range_i_re,&_range_j_re,&_range_k_re);CHKERRQ(ierr);
4425e897e82SDave May 
4435e897e82SDave May     ctx->dmrepart->ops->creatematrix = dm->ops->creatematrix;
4445e897e82SDave May     ctx->dmrepart->ops->createdomaindecomposition = dm->ops->createdomaindecomposition;
4451e07b27eSBarry Smith   }
4461e07b27eSBarry Smith 
4471e07b27eSBarry Smith   /* generate ranges for repartitioned dm */
4481e07b27eSBarry Smith   /* note - assume rank 0 always participates */
4491e07b27eSBarry Smith   ierr = MPI_Bcast(&ctx->Mp_re,1,MPIU_INT,0,comm);CHKERRQ(ierr);
4501e07b27eSBarry Smith   ierr = MPI_Bcast(&ctx->Np_re,1,MPIU_INT,0,comm);CHKERRQ(ierr);
4511e07b27eSBarry Smith   ierr = MPI_Bcast(&ctx->Pp_re,1,MPIU_INT,0,comm);CHKERRQ(ierr);
4521e07b27eSBarry Smith 
453c2be2c73SBarry Smith   ierr = PetscCalloc1(ctx->Mp_re,&ctx->range_i_re);CHKERRQ(ierr);
454c2be2c73SBarry Smith   ierr = PetscCalloc1(ctx->Np_re,&ctx->range_j_re);CHKERRQ(ierr);
455c2be2c73SBarry Smith   ierr = PetscCalloc1(ctx->Pp_re,&ctx->range_k_re);CHKERRQ(ierr);
4561e07b27eSBarry Smith 
457e3acf2f7SBarry Smith   if (_range_i_re) {ierr = PetscMemcpy(ctx->range_i_re,_range_i_re,sizeof(PetscInt)*ctx->Mp_re);CHKERRQ(ierr);}
458e3acf2f7SBarry Smith   if (_range_j_re) {ierr = PetscMemcpy(ctx->range_j_re,_range_j_re,sizeof(PetscInt)*ctx->Np_re);CHKERRQ(ierr);}
459e3acf2f7SBarry Smith   if (_range_k_re) {ierr = PetscMemcpy(ctx->range_k_re,_range_k_re,sizeof(PetscInt)*ctx->Pp_re);CHKERRQ(ierr);}
4601e07b27eSBarry Smith 
4611e07b27eSBarry Smith   ierr = MPI_Bcast(ctx->range_i_re,ctx->Mp_re,MPIU_INT,0,comm);CHKERRQ(ierr);
4621e07b27eSBarry Smith   ierr = MPI_Bcast(ctx->range_j_re,ctx->Np_re,MPIU_INT,0,comm);CHKERRQ(ierr);
4631e07b27eSBarry Smith   ierr = MPI_Bcast(ctx->range_k_re,ctx->Pp_re,MPIU_INT,0,comm);CHKERRQ(ierr);
4641e07b27eSBarry Smith 
465e3acf2f7SBarry Smith   ierr = PetscMalloc1(ctx->Mp_re,&ctx->start_i_re);CHKERRQ(ierr);
466e3acf2f7SBarry Smith   ierr = PetscMalloc1(ctx->Np_re,&ctx->start_j_re);CHKERRQ(ierr);
467e3acf2f7SBarry Smith   ierr = PetscMalloc1(ctx->Pp_re,&ctx->start_k_re);CHKERRQ(ierr);
4681e07b27eSBarry Smith 
4691e07b27eSBarry Smith   sum = 0;
4701e07b27eSBarry Smith   for (k=0; k<ctx->Mp_re; k++) {
4711e07b27eSBarry Smith     ctx->start_i_re[k] = sum;
4721e07b27eSBarry Smith     sum += ctx->range_i_re[k];
4731e07b27eSBarry Smith   }
4741e07b27eSBarry Smith 
4751e07b27eSBarry Smith   sum = 0;
4761e07b27eSBarry Smith   for (k=0; k<ctx->Np_re; k++) {
4771e07b27eSBarry Smith     ctx->start_j_re[k] = sum;
4781e07b27eSBarry Smith     sum += ctx->range_j_re[k];
4791e07b27eSBarry Smith   }
4801e07b27eSBarry Smith 
4811e07b27eSBarry Smith   sum = 0;
4821e07b27eSBarry Smith   for (k=0; k<ctx->Pp_re; k++) {
4831e07b27eSBarry Smith     ctx->start_k_re[k] = sum;
4841e07b27eSBarry Smith     sum += ctx->range_k_re[k];
4851e07b27eSBarry Smith   }
4861e07b27eSBarry Smith 
487ba1c3560SDave May   /* attach repartitioned dm to child ksp */
488ba1c3560SDave May   {
489ba1c3560SDave May     PetscErrorCode (*dmksp_func)(KSP,Mat,Mat,void*);
490ba1c3560SDave May     void           *dmksp_ctx;
491ba1c3560SDave May 
492ba1c3560SDave May     ierr = DMKSPGetComputeOperators(dm,&dmksp_func,&dmksp_ctx);CHKERRQ(ierr);
493ba1c3560SDave May 
4941e07b27eSBarry Smith     /* attach dm to ksp on sub communicator */
4951e07b27eSBarry Smith     if (isActiveRank(sred->psubcomm)) {
4961e07b27eSBarry Smith       ierr = KSPSetDM(sred->ksp,ctx->dmrepart);CHKERRQ(ierr);
497ba1c3560SDave May 
498c5db1f53SDave May       if (!dmksp_func || sred->ignore_kspcomputeoperators) {
4991e07b27eSBarry Smith         ierr = KSPSetDMActive(sred->ksp,PETSC_FALSE);CHKERRQ(ierr);
500ba1c3560SDave May       } else {
501ba1c3560SDave May         /* sub ksp inherits dmksp_func and context provided by user */
502ba1c3560SDave May         ierr = KSPSetComputeOperators(sred->ksp,dmksp_func,dmksp_ctx);CHKERRQ(ierr);
503ba1c3560SDave May         ierr = KSPSetDMActive(sred->ksp,PETSC_TRUE);CHKERRQ(ierr);
504ba1c3560SDave May       }
505ba1c3560SDave May     }
5061e07b27eSBarry Smith   }
5071e07b27eSBarry Smith   PetscFunctionReturn(0);
5081e07b27eSBarry Smith }
5091e07b27eSBarry Smith 
5101e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda_permutation_3d(PC pc,PC_Telescope sred,PC_Telescope_DMDACtx *ctx)
5111e07b27eSBarry Smith {
5121e07b27eSBarry Smith   PetscErrorCode ierr;
5131e07b27eSBarry Smith   DM             dm;
5141e07b27eSBarry Smith   MPI_Comm       comm;
5151e07b27eSBarry Smith   Mat            Pscalar,P;
5161e07b27eSBarry Smith   PetscInt       ndof;
5171e07b27eSBarry Smith   PetscInt       i,j,k,location,startI[3],endI[3],lenI[3],nx,ny,nz;
5181e07b27eSBarry Smith   PetscInt       sr,er,Mr;
5191e07b27eSBarry Smith   Vec            V;
5201e07b27eSBarry Smith 
5211e07b27eSBarry Smith   PetscFunctionBegin;
5221e07b27eSBarry Smith   ierr = PetscInfo(pc,"PCTelescope: setting up the permutation matrix (DMDA-3D)\n");CHKERRQ(ierr);
5231e07b27eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr);
5241e07b27eSBarry Smith 
5251e07b27eSBarry Smith   ierr = PCGetDM(pc,&dm);CHKERRQ(ierr);
5261e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,NULL,&nx,&ny,&nz,NULL,NULL,NULL,&ndof,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
5271e07b27eSBarry Smith 
5281e07b27eSBarry Smith   ierr = DMGetGlobalVector(dm,&V);CHKERRQ(ierr);
5291e07b27eSBarry Smith   ierr = VecGetSize(V,&Mr);CHKERRQ(ierr);
5301e07b27eSBarry Smith   ierr = VecGetOwnershipRange(V,&sr,&er);CHKERRQ(ierr);
5311e07b27eSBarry Smith   ierr = DMRestoreGlobalVector(dm,&V);CHKERRQ(ierr);
5321e07b27eSBarry Smith   sr = sr / ndof;
5331e07b27eSBarry Smith   er = er / ndof;
5341e07b27eSBarry Smith   Mr = Mr / ndof;
5351e07b27eSBarry Smith 
5361e07b27eSBarry Smith   ierr = MatCreate(comm,&Pscalar);CHKERRQ(ierr);
5371e07b27eSBarry Smith   ierr = MatSetSizes(Pscalar,(er-sr),(er-sr),Mr,Mr);CHKERRQ(ierr);
5381e07b27eSBarry Smith   ierr = MatSetType(Pscalar,MATAIJ);CHKERRQ(ierr);
539308c2a70SDave May   ierr = MatSeqAIJSetPreallocation(Pscalar,1,NULL);CHKERRQ(ierr);
540308c2a70SDave May   ierr = MatMPIAIJSetPreallocation(Pscalar,1,NULL,1,NULL);CHKERRQ(ierr);
5411e07b27eSBarry Smith 
5421e07b27eSBarry Smith   ierr = DMDAGetCorners(dm,NULL,NULL,NULL,&lenI[0],&lenI[1],&lenI[2]);CHKERRQ(ierr);
5431e07b27eSBarry Smith   ierr = DMDAGetCorners(dm,&startI[0],&startI[1],&startI[2],&endI[0],&endI[1],&endI[2]);CHKERRQ(ierr);
5441e07b27eSBarry Smith   endI[0] += startI[0];
5451e07b27eSBarry Smith   endI[1] += startI[1];
5461e07b27eSBarry Smith   endI[2] += startI[2];
5471e07b27eSBarry Smith 
5481e07b27eSBarry Smith   for (k=startI[2]; k<endI[2]; k++) {
5491e07b27eSBarry Smith     for (j=startI[1]; j<endI[1]; j++) {
5501e07b27eSBarry Smith       for (i=startI[0]; i<endI[0]; i++) {
5511e07b27eSBarry Smith         PetscMPIInt rank_ijk_re,rank_reI[3];
5521e07b27eSBarry Smith         PetscInt    s0_re;
553c6a0d831SBarry Smith         PetscInt    ii,jj,kk,local_ijk_re,mapped_ijk;
5541e07b27eSBarry Smith         PetscInt    lenI_re[3];
5551e07b27eSBarry Smith 
5561e07b27eSBarry Smith         location = (i - startI[0]) + (j - startI[1])*lenI[0] + (k - startI[2])*lenI[0]*lenI[1];
5571e07b27eSBarry Smith         ierr = _DMDADetermineRankFromGlobalIJK(3,i,j,k,   ctx->Mp_re,ctx->Np_re,ctx->Pp_re,
5581e07b27eSBarry Smith                                                ctx->start_i_re,ctx->start_j_re,ctx->start_k_re,
5591e07b27eSBarry Smith                                                ctx->range_i_re,ctx->range_j_re,ctx->range_k_re,
5601e07b27eSBarry Smith                                                &rank_reI[0],&rank_reI[1],&rank_reI[2],&rank_ijk_re);CHKERRQ(ierr);
5611e07b27eSBarry Smith         ierr = _DMDADetermineGlobalS0(3,rank_ijk_re, ctx->Mp_re,ctx->Np_re,ctx->Pp_re, ctx->range_i_re,ctx->range_j_re,ctx->range_k_re, &s0_re);CHKERRQ(ierr);
5621e07b27eSBarry Smith         ii = i - ctx->start_i_re[ rank_reI[0] ];
5631e07b27eSBarry Smith         if (ii < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmdarepart-perm3d] index error ii");
5641e07b27eSBarry Smith         jj = j - ctx->start_j_re[ rank_reI[1] ];
5651e07b27eSBarry Smith         if (jj < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmdarepart-perm3d] index error jj");
5661e07b27eSBarry Smith         kk = k - ctx->start_k_re[ rank_reI[2] ];
5671e07b27eSBarry Smith         if (kk < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmdarepart-perm3d] index error kk");
5681e07b27eSBarry Smith         lenI_re[0] = ctx->range_i_re[ rank_reI[0] ];
5691e07b27eSBarry Smith         lenI_re[1] = ctx->range_j_re[ rank_reI[1] ];
5701e07b27eSBarry Smith         lenI_re[2] = ctx->range_k_re[ rank_reI[2] ];
5711e07b27eSBarry Smith         local_ijk_re = ii + jj * lenI_re[0] + kk * lenI_re[0] * lenI_re[1];
5721e07b27eSBarry Smith         mapped_ijk = s0_re + local_ijk_re;
5731e07b27eSBarry Smith         ierr = MatSetValue(Pscalar,sr+location,mapped_ijk,1.0,INSERT_VALUES);CHKERRQ(ierr);
5741e07b27eSBarry Smith       }
5751e07b27eSBarry Smith     }
5761e07b27eSBarry Smith   }
5771e07b27eSBarry Smith   ierr = MatAssemblyBegin(Pscalar,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
5781e07b27eSBarry Smith   ierr = MatAssemblyEnd(Pscalar,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
5791e07b27eSBarry Smith   ierr = MatCreateMAIJ(Pscalar,ndof,&P);CHKERRQ(ierr);
5801e07b27eSBarry Smith   ierr = MatDestroy(&Pscalar);CHKERRQ(ierr);
5811e07b27eSBarry Smith   ctx->permutation = P;
5821e07b27eSBarry Smith   PetscFunctionReturn(0);
5831e07b27eSBarry Smith }
5841e07b27eSBarry Smith 
5851e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda_permutation_2d(PC pc,PC_Telescope sred,PC_Telescope_DMDACtx *ctx)
5861e07b27eSBarry Smith {
5871e07b27eSBarry Smith   PetscErrorCode ierr;
5881e07b27eSBarry Smith   DM             dm;
5891e07b27eSBarry Smith   MPI_Comm       comm;
5901e07b27eSBarry Smith   Mat            Pscalar,P;
5911e07b27eSBarry Smith   PetscInt       ndof;
5921e07b27eSBarry Smith   PetscInt       i,j,location,startI[2],endI[2],lenI[2],nx,ny,nz;
5931e07b27eSBarry Smith   PetscInt       sr,er,Mr;
5941e07b27eSBarry Smith   Vec            V;
5951e07b27eSBarry Smith 
5961e07b27eSBarry Smith   PetscFunctionBegin;
5971e07b27eSBarry Smith   ierr = PetscInfo(pc,"PCTelescope: setting up the permutation matrix (DMDA-2D)\n");CHKERRQ(ierr);
5981e07b27eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr);
5991e07b27eSBarry Smith   ierr = PCGetDM(pc,&dm);CHKERRQ(ierr);
6001e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,NULL,&nx,&ny,&nz,NULL,NULL,NULL,&ndof,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
6011e07b27eSBarry Smith   ierr = DMGetGlobalVector(dm,&V);CHKERRQ(ierr);
6021e07b27eSBarry Smith   ierr = VecGetSize(V,&Mr);CHKERRQ(ierr);
6031e07b27eSBarry Smith   ierr = VecGetOwnershipRange(V,&sr,&er);CHKERRQ(ierr);
6041e07b27eSBarry Smith   ierr = DMRestoreGlobalVector(dm,&V);CHKERRQ(ierr);
6051e07b27eSBarry Smith   sr = sr / ndof;
6061e07b27eSBarry Smith   er = er / ndof;
6071e07b27eSBarry Smith   Mr = Mr / ndof;
6081e07b27eSBarry Smith 
6091e07b27eSBarry Smith   ierr = MatCreate(comm,&Pscalar);CHKERRQ(ierr);
6101e07b27eSBarry Smith   ierr = MatSetSizes(Pscalar,(er-sr),(er-sr),Mr,Mr);CHKERRQ(ierr);
6111e07b27eSBarry Smith   ierr = MatSetType(Pscalar,MATAIJ);CHKERRQ(ierr);
612308c2a70SDave May   ierr = MatSeqAIJSetPreallocation(Pscalar,1,NULL);CHKERRQ(ierr);
613308c2a70SDave May   ierr = MatMPIAIJSetPreallocation(Pscalar,1,NULL,1,NULL);CHKERRQ(ierr);
6141e07b27eSBarry Smith 
6151e07b27eSBarry Smith   ierr = DMDAGetCorners(dm,NULL,NULL,NULL,&lenI[0],&lenI[1],NULL);CHKERRQ(ierr);
6161e07b27eSBarry Smith   ierr = DMDAGetCorners(dm,&startI[0],&startI[1],NULL,&endI[0],&endI[1],NULL);CHKERRQ(ierr);
6171e07b27eSBarry Smith   endI[0] += startI[0];
6181e07b27eSBarry Smith   endI[1] += startI[1];
6191e07b27eSBarry Smith 
6201e07b27eSBarry Smith   for (j=startI[1]; j<endI[1]; j++) {
6211e07b27eSBarry Smith     for (i=startI[0]; i<endI[0]; i++) {
6221e07b27eSBarry Smith       PetscMPIInt rank_ijk_re,rank_reI[3];
6231e07b27eSBarry Smith       PetscInt    s0_re;
624c6a0d831SBarry Smith       PetscInt    ii,jj,local_ijk_re,mapped_ijk;
6251e07b27eSBarry Smith       PetscInt    lenI_re[3];
6261e07b27eSBarry Smith 
6271e07b27eSBarry Smith       location = (i - startI[0]) + (j - startI[1])*lenI[0];
6281e07b27eSBarry Smith       ierr = _DMDADetermineRankFromGlobalIJK(2,i,j,0,   ctx->Mp_re,ctx->Np_re,ctx->Pp_re,
6291e07b27eSBarry Smith                                              ctx->start_i_re,ctx->start_j_re,ctx->start_k_re,
6301e07b27eSBarry Smith                                              ctx->range_i_re,ctx->range_j_re,ctx->range_k_re,
6311e07b27eSBarry Smith                                              &rank_reI[0],&rank_reI[1],NULL,&rank_ijk_re);CHKERRQ(ierr);
6321e07b27eSBarry Smith 
6331e07b27eSBarry Smith       ierr = _DMDADetermineGlobalS0(2,rank_ijk_re, ctx->Mp_re,ctx->Np_re,ctx->Pp_re, ctx->range_i_re,ctx->range_j_re,ctx->range_k_re, &s0_re);CHKERRQ(ierr);
6341e07b27eSBarry Smith 
6351e07b27eSBarry Smith       ii = i - ctx->start_i_re[ rank_reI[0] ];
6361e07b27eSBarry Smith       if (ii < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmdarepart-perm2d] index error ii");
6371e07b27eSBarry Smith       jj = j - ctx->start_j_re[ rank_reI[1] ];
6381e07b27eSBarry Smith       if (jj < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"[dmdarepart-perm2d] index error jj");
6391e07b27eSBarry Smith 
6401e07b27eSBarry Smith       lenI_re[0] = ctx->range_i_re[ rank_reI[0] ];
6411e07b27eSBarry Smith       lenI_re[1] = ctx->range_j_re[ rank_reI[1] ];
6421e07b27eSBarry Smith       local_ijk_re = ii + jj * lenI_re[0];
6431e07b27eSBarry Smith       mapped_ijk = s0_re + local_ijk_re;
6441e07b27eSBarry Smith       ierr = MatSetValue(Pscalar,sr+location,mapped_ijk,1.0,INSERT_VALUES);CHKERRQ(ierr);
6451e07b27eSBarry Smith     }
6461e07b27eSBarry Smith   }
6471e07b27eSBarry Smith   ierr = MatAssemblyBegin(Pscalar,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
6481e07b27eSBarry Smith   ierr = MatAssemblyEnd(Pscalar,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
6491e07b27eSBarry Smith   ierr = MatCreateMAIJ(Pscalar,ndof,&P);CHKERRQ(ierr);
6501e07b27eSBarry Smith   ierr = MatDestroy(&Pscalar);CHKERRQ(ierr);
6511e07b27eSBarry Smith   ctx->permutation = P;
6521e07b27eSBarry Smith   PetscFunctionReturn(0);
6531e07b27eSBarry Smith }
6541e07b27eSBarry Smith 
6551e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda_scatters(PC pc,PC_Telescope sred,PC_Telescope_DMDACtx *ctx)
6561e07b27eSBarry Smith {
6571e07b27eSBarry Smith   PetscErrorCode ierr;
6581e07b27eSBarry Smith   Vec            xred,yred,xtmp,x,xp;
6591e07b27eSBarry Smith   VecScatter     scatter;
6601e07b27eSBarry Smith   IS             isin;
6611e07b27eSBarry Smith   Mat            B;
6621e07b27eSBarry Smith   PetscInt       m,bs,st,ed;
6631e07b27eSBarry Smith   MPI_Comm       comm;
6641e07b27eSBarry Smith 
6651e07b27eSBarry Smith   PetscFunctionBegin;
6661e07b27eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr);
6671e07b27eSBarry Smith   ierr = PCGetOperators(pc,NULL,&B);CHKERRQ(ierr);
6681e07b27eSBarry Smith   ierr = MatCreateVecs(B,&x,NULL);CHKERRQ(ierr);
6691e07b27eSBarry Smith   ierr = MatGetBlockSize(B,&bs);CHKERRQ(ierr);
6701e07b27eSBarry Smith   ierr = VecDuplicate(x,&xp);CHKERRQ(ierr);
6713ac26c5eSBarry Smith   m = 0;
6721e07b27eSBarry Smith   xred = NULL;
6731e07b27eSBarry Smith   yred = NULL;
6741e07b27eSBarry Smith   if (isActiveRank(sred->psubcomm)) {
6751e07b27eSBarry Smith     ierr = DMCreateGlobalVector(ctx->dmrepart,&xred);CHKERRQ(ierr);
6761e07b27eSBarry Smith     ierr = VecDuplicate(xred,&yred);CHKERRQ(ierr);
6771e07b27eSBarry Smith     ierr = VecGetOwnershipRange(xred,&st,&ed);CHKERRQ(ierr);
6781e07b27eSBarry Smith     ierr = ISCreateStride(comm,ed-st,st,1,&isin);CHKERRQ(ierr);
679ca43db0aSBarry Smith     ierr = VecGetLocalSize(xred,&m);CHKERRQ(ierr);
6801e07b27eSBarry Smith   } else {
6811e07b27eSBarry Smith     ierr = VecGetOwnershipRange(x,&st,&ed);CHKERRQ(ierr);
6823ac26c5eSBarry Smith     ierr = ISCreateStride(comm,0,st,1,&isin);CHKERRQ(ierr);
6831e07b27eSBarry Smith   }
6841e07b27eSBarry Smith   ierr = ISSetBlockSize(isin,bs);CHKERRQ(ierr);
6851e07b27eSBarry Smith   ierr = VecCreate(comm,&xtmp);CHKERRQ(ierr);
6861e07b27eSBarry Smith   ierr = VecSetSizes(xtmp,m,PETSC_DECIDE);CHKERRQ(ierr);
6871e07b27eSBarry Smith   ierr = VecSetBlockSize(xtmp,bs);CHKERRQ(ierr);
6881e07b27eSBarry Smith   ierr = VecSetType(xtmp,((PetscObject)x)->type_name);CHKERRQ(ierr);
689*35928de7SBarry Smith   ierr = VecScatterCreateWithData(x,isin,xtmp,NULL,&scatter);CHKERRQ(ierr);
6901e07b27eSBarry Smith   sred->xred    = xred;
6911e07b27eSBarry Smith   sred->yred    = yred;
6921e07b27eSBarry Smith   sred->isin    = isin;
6931e07b27eSBarry Smith   sred->scatter = scatter;
6941e07b27eSBarry Smith   sred->xtmp    = xtmp;
6951e07b27eSBarry Smith 
6961e07b27eSBarry Smith   ctx->xp       = xp;
6971e07b27eSBarry Smith   ierr = VecDestroy(&x);CHKERRQ(ierr);
6981e07b27eSBarry Smith   PetscFunctionReturn(0);
6991e07b27eSBarry Smith }
7001e07b27eSBarry Smith 
7011e07b27eSBarry Smith PetscErrorCode PCTelescopeSetUp_dmda(PC pc,PC_Telescope sred)
7021e07b27eSBarry Smith {
7031e07b27eSBarry Smith   PC_Telescope_DMDACtx *ctx;
7041e07b27eSBarry Smith   PetscInt                 dim;
7051e07b27eSBarry Smith   DM                       dm;
7061e07b27eSBarry Smith   MPI_Comm                 comm;
7071e07b27eSBarry Smith   PetscErrorCode           ierr;
7081e07b27eSBarry Smith 
7091e07b27eSBarry Smith   PetscFunctionBegin;
7101e07b27eSBarry Smith   ierr = PetscInfo(pc,"PCTelescope: setup (DMDA)\n");CHKERRQ(ierr);
711e3acf2f7SBarry Smith   PetscMalloc1(1,&ctx);
7121e07b27eSBarry Smith   PetscMemzero(ctx,sizeof(PC_Telescope_DMDACtx));
7131e07b27eSBarry Smith   sred->dm_ctx = (void*)ctx;
7141e07b27eSBarry Smith 
7151e07b27eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr);
7161e07b27eSBarry Smith   ierr = PCGetDM(pc,&dm);CHKERRQ(ierr);
7171e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,&dim,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
7181e07b27eSBarry Smith 
7191e07b27eSBarry Smith   PCTelescopeSetUp_dmda_repart(pc,sred,ctx);
7201e07b27eSBarry Smith   PCTelescopeSetUp_dmda_repart_coors(pc,sred,ctx);
7211e07b27eSBarry Smith   switch (dim) {
7221e07b27eSBarry Smith   case 1: SETERRQ(comm,PETSC_ERR_SUP,"Telescope: DMDA (1D) repartitioning not provided");
7231e07b27eSBarry Smith     break;
7241e07b27eSBarry Smith   case 2: ierr = PCTelescopeSetUp_dmda_permutation_2d(pc,sred,ctx);CHKERRQ(ierr);
7251e07b27eSBarry Smith     break;
7261e07b27eSBarry Smith   case 3: ierr = PCTelescopeSetUp_dmda_permutation_3d(pc,sred,ctx);CHKERRQ(ierr);
7271e07b27eSBarry Smith     break;
7281e07b27eSBarry Smith   }
7291e07b27eSBarry Smith   ierr = PCTelescopeSetUp_dmda_scatters(pc,sred,ctx);CHKERRQ(ierr);
7301e07b27eSBarry Smith   PetscFunctionReturn(0);
7311e07b27eSBarry Smith }
7321e07b27eSBarry Smith 
733ba1c3560SDave May PetscErrorCode PCTelescopeMatCreate_dmda_dmactivefalse(PC pc,PC_Telescope sred,MatReuse reuse,Mat *A)
7341e07b27eSBarry Smith {
7351e07b27eSBarry Smith   PetscErrorCode ierr;
7361e07b27eSBarry Smith   PC_Telescope_DMDACtx *ctx;
7371e07b27eSBarry Smith   MPI_Comm       comm,subcomm;
7381e07b27eSBarry Smith   Mat            Bperm,Bred,B,P;
7391e07b27eSBarry Smith   PetscInt       nr,nc;
7401e07b27eSBarry Smith   IS             isrow,iscol;
7411e07b27eSBarry Smith   Mat            Blocal,*_Blocal;
7421e07b27eSBarry Smith 
7431e07b27eSBarry Smith   PetscFunctionBegin;
7441e07b27eSBarry Smith   ierr = PetscInfo(pc,"PCTelescope: updating the redundant preconditioned operator (DMDA)\n");CHKERRQ(ierr);
7451e07b27eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr);
7461e07b27eSBarry Smith   subcomm = PetscSubcommChild(sred->psubcomm);
7471e07b27eSBarry Smith   ctx = (PC_Telescope_DMDACtx*)sred->dm_ctx;
7481e07b27eSBarry Smith 
7491e07b27eSBarry Smith   ierr = PCGetOperators(pc,NULL,&B);CHKERRQ(ierr);
7501e07b27eSBarry Smith   ierr = MatGetSize(B,&nr,&nc);CHKERRQ(ierr);
7511e07b27eSBarry Smith 
7521e07b27eSBarry Smith   P = ctx->permutation;
7531e07b27eSBarry Smith   ierr = MatPtAP(B,P,MAT_INITIAL_MATRIX,1.1,&Bperm);CHKERRQ(ierr);
7541e07b27eSBarry Smith 
7551e07b27eSBarry Smith   /* Get submatrices */
7561e07b27eSBarry Smith   isrow = sred->isin;
7571e07b27eSBarry Smith   ierr = ISCreateStride(comm,nc,0,1,&iscol);CHKERRQ(ierr);
7581e07b27eSBarry Smith 
7597dae84e0SHong Zhang   ierr = MatCreateSubMatrices(Bperm,1,&isrow,&iscol,MAT_INITIAL_MATRIX,&_Blocal);CHKERRQ(ierr);
7601e07b27eSBarry Smith   Blocal = *_Blocal;
7611e07b27eSBarry Smith   Bred = NULL;
7621e07b27eSBarry Smith   if (isActiveRank(sred->psubcomm)) {
7631e07b27eSBarry Smith     PetscInt mm;
7641e07b27eSBarry Smith 
7651e07b27eSBarry Smith     if (reuse != MAT_INITIAL_MATRIX) {Bred = *A;}
7661e07b27eSBarry Smith     ierr = MatGetSize(Blocal,&mm,NULL);CHKERRQ(ierr);
767bfd6bcc6SSatish Balay     /* ierr = MatCreateMPIMatConcatenateSeqMat(subcomm,Blocal,PETSC_DECIDE,reuse,&Bred);CHKERRQ(ierr); */
7681e07b27eSBarry Smith     ierr = MatCreateMPIMatConcatenateSeqMat(subcomm,Blocal,mm,reuse,&Bred);CHKERRQ(ierr);
7691e07b27eSBarry Smith   }
7701e07b27eSBarry Smith   *A = Bred;
7711e07b27eSBarry Smith 
7721e07b27eSBarry Smith   ierr = ISDestroy(&iscol);CHKERRQ(ierr);
7731e07b27eSBarry Smith   ierr = MatDestroy(&Bperm);CHKERRQ(ierr);
7741e07b27eSBarry Smith   ierr = MatDestroyMatrices(1,&_Blocal);CHKERRQ(ierr);
7751e07b27eSBarry Smith   PetscFunctionReturn(0);
7761e07b27eSBarry Smith }
7771e07b27eSBarry Smith 
778ba1c3560SDave May PetscErrorCode PCTelescopeMatCreate_dmda(PC pc,PC_Telescope sred,MatReuse reuse,Mat *A)
779ba1c3560SDave May {
780ba1c3560SDave May   PetscErrorCode ierr;
781ba1c3560SDave May   DM             dm;
782ba1c3560SDave May   PetscErrorCode (*dmksp_func)(KSP,Mat,Mat,void*);
783ba1c3560SDave May   void           *dmksp_ctx;
784ba1c3560SDave May 
785ba1c3560SDave May   PetscFunctionBegin;
786ba1c3560SDave May   ierr = PCGetDM(pc,&dm);CHKERRQ(ierr);
787ba1c3560SDave May   ierr = DMKSPGetComputeOperators(dm,&dmksp_func,&dmksp_ctx);CHKERRQ(ierr);
788dc9ee9fdSDave May   /* We assume that dmksp_func = NULL, is equivalent to dmActive = PETSC_FALSE */
7897c5279cbSDave May   if (dmksp_func && !sred->ignore_kspcomputeoperators) {
790ba1c3560SDave May     DM  dmrepart;
79128323a89SDave May     Mat Ak;
792ba1c3560SDave May 
793ba1c3560SDave May     *A = NULL;
794ba1c3560SDave May     if (isActiveRank(sred->psubcomm)) {
795ba1c3560SDave May       ierr = KSPGetDM(sred->ksp,&dmrepart);CHKERRQ(ierr);
796ba1c3560SDave May       if (reuse == MAT_INITIAL_MATRIX) {
797ba1c3560SDave May         ierr = DMCreateMatrix(dmrepart,&Ak);CHKERRQ(ierr);
798ba1c3560SDave May         *A = Ak;
799ba1c3560SDave May       } else if (reuse == MAT_REUSE_MATRIX) {
800ba1c3560SDave May         Ak = *A;
801ba1c3560SDave May       }
8025c5dbb1cSDave May       /*
8035c5dbb1cSDave May        There is no need to explicitly assemble the operator now,
8045c5dbb1cSDave May        the sub-KSP will call the method provided to KSPSetComputeOperators() during KSPSetUp()
8055c5dbb1cSDave May       */
806ba1c3560SDave May     }
807ba1c3560SDave May   } else {
808ba1c3560SDave May     ierr = PCTelescopeMatCreate_dmda_dmactivefalse(pc,sred,reuse,A);CHKERRQ(ierr);
809ba1c3560SDave May   }
810ba1c3560SDave May   PetscFunctionReturn(0);
811ba1c3560SDave May }
812ba1c3560SDave May 
813392968a1SPatrick Sanan PetscErrorCode PCTelescopeSubNullSpaceCreate_dmda_Telescope(PC pc,PC_Telescope sred,MatNullSpace nullspace,MatNullSpace *sub_nullspace)
8141e07b27eSBarry Smith {
8151e07b27eSBarry Smith   PetscErrorCode   ierr;
8161e07b27eSBarry Smith   PetscBool        has_const;
817a947c41eSDave May   PetscInt         i,k,n = 0;
8181e07b27eSBarry Smith   const Vec        *vecs;
819c41e779fSDave May   Vec              *sub_vecs = NULL;
8201e07b27eSBarry Smith   MPI_Comm         subcomm;
8211e07b27eSBarry Smith   PC_Telescope_DMDACtx *ctx;
8221e07b27eSBarry Smith 
8231e07b27eSBarry Smith   PetscFunctionBegin;
8241e07b27eSBarry Smith   ctx = (PC_Telescope_DMDACtx*)sred->dm_ctx;
8251e07b27eSBarry Smith   subcomm = PetscSubcommChild(sred->psubcomm);
8261e07b27eSBarry Smith   ierr = MatNullSpaceGetVecs(nullspace,&has_const,&n,&vecs);CHKERRQ(ierr);
8271e07b27eSBarry Smith 
8281e07b27eSBarry Smith   if (isActiveRank(sred->psubcomm)) {
8291e07b27eSBarry Smith     /* create new vectors */
830e3acf2f7SBarry Smith     if (n) {
831e3acf2f7SBarry Smith       ierr = VecDuplicateVecs(sred->xred,n,&sub_vecs);CHKERRQ(ierr);
8321e07b27eSBarry Smith     }
8331e07b27eSBarry Smith   }
8341e07b27eSBarry Smith 
8351e07b27eSBarry Smith   /* copy entries */
8361e07b27eSBarry Smith   for (k=0; k<n; k++) {
8371e07b27eSBarry Smith     const PetscScalar *x_array;
8381e07b27eSBarry Smith     PetscScalar       *LA_sub_vec;
83913c30530SDave May     PetscInt          st,ed;
8401e07b27eSBarry Smith 
8411e07b27eSBarry Smith     /* permute vector into ordering associated with re-partitioned dmda */
8421e07b27eSBarry Smith     ierr = MatMultTranspose(ctx->permutation,vecs[k],ctx->xp);CHKERRQ(ierr);
8431e07b27eSBarry Smith 
8441e07b27eSBarry Smith     /* pull in vector x->xtmp */
8451e07b27eSBarry Smith     ierr = VecScatterBegin(sred->scatter,ctx->xp,sred->xtmp,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
8461e07b27eSBarry Smith     ierr = VecScatterEnd(sred->scatter,ctx->xp,sred->xtmp,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
8471e07b27eSBarry Smith 
848392968a1SPatrick Sanan     /* copy vector entries into xred */
8491e07b27eSBarry Smith     ierr = VecGetArrayRead(sred->xtmp,&x_array);CHKERRQ(ierr);
850ea2b237eSDave May     if (sub_vecs) {
851ea2b237eSDave May       if (sub_vecs[k]) {
8521e07b27eSBarry Smith         ierr = VecGetOwnershipRange(sub_vecs[k],&st,&ed);CHKERRQ(ierr);
8531e07b27eSBarry Smith         ierr = VecGetArray(sub_vecs[k],&LA_sub_vec);CHKERRQ(ierr);
8541e07b27eSBarry Smith         for (i=0; i<ed-st; i++) {
8551e07b27eSBarry Smith           LA_sub_vec[i] = x_array[i];
8561e07b27eSBarry Smith         }
8571e07b27eSBarry Smith         ierr = VecRestoreArray(sub_vecs[k],&LA_sub_vec);CHKERRQ(ierr);
8581e07b27eSBarry Smith       }
859ea2b237eSDave May     }
8601e07b27eSBarry Smith     ierr = VecRestoreArrayRead(sred->xtmp,&x_array);CHKERRQ(ierr);
8611e07b27eSBarry Smith   }
8621e07b27eSBarry Smith 
8631e07b27eSBarry Smith   if (isActiveRank(sred->psubcomm)) {
864d8b9d5b7SPatrick Sanan     /* create new (near) nullspace for redundant object */
865392968a1SPatrick Sanan     ierr = MatNullSpaceCreate(subcomm,has_const,n,sub_vecs,sub_nullspace);CHKERRQ(ierr);
866392968a1SPatrick Sanan     ierr = VecDestroyVecs(n,&sub_vecs);CHKERRQ(ierr);
867d8b9d5b7SPatrick Sanan     if (nullspace->remove) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Propagation of custom remove callbacks not supported when propagating (near) nullspaces with PCTelescope");
868d8b9d5b7SPatrick Sanan     if (nullspace->rmctx) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Propagation of custom remove callback context not supported when propagating (near) nullspaces with PCTelescope");
869d8b9d5b7SPatrick Sanan   }
870392968a1SPatrick Sanan 
871392968a1SPatrick Sanan   PetscFunctionReturn(0);
872392968a1SPatrick Sanan }
873392968a1SPatrick Sanan 
874392968a1SPatrick Sanan PetscErrorCode PCTelescopeMatNullSpaceCreate_dmda(PC pc,PC_Telescope sred,Mat sub_mat)
875392968a1SPatrick Sanan {
876392968a1SPatrick Sanan   PetscErrorCode   ierr;
877392968a1SPatrick Sanan   Mat              B;
878392968a1SPatrick Sanan 
879392968a1SPatrick Sanan   PetscFunctionBegin;
880392968a1SPatrick Sanan   ierr = PCGetOperators(pc,NULL,&B);CHKERRQ(ierr);
881392968a1SPatrick Sanan 
882392968a1SPatrick Sanan   {
883392968a1SPatrick Sanan     MatNullSpace nullspace,sub_nullspace;
884392968a1SPatrick Sanan     ierr = MatGetNullSpace(B,&nullspace);CHKERRQ(ierr);
885392968a1SPatrick Sanan     if (nullspace) {
886392968a1SPatrick Sanan       ierr = PetscInfo(pc,"PCTelescope: generating nullspace (DMDA)\n");CHKERRQ(ierr);
887392968a1SPatrick Sanan       ierr = PCTelescopeSubNullSpaceCreate_dmda_Telescope(pc,sred,nullspace,&sub_nullspace);CHKERRQ(ierr);
888392968a1SPatrick Sanan       if (isActiveRank(sred->psubcomm)) {
889392968a1SPatrick Sanan         ierr = MatSetNullSpace(sub_mat,sub_nullspace);CHKERRQ(ierr);
89041ff1ee9SPatrick Sanan         ierr = MatNullSpaceDestroy(&sub_nullspace);CHKERRQ(ierr);
8911e07b27eSBarry Smith       }
892392968a1SPatrick Sanan     }
893392968a1SPatrick Sanan   }
894392968a1SPatrick Sanan 
895392968a1SPatrick Sanan   {
896392968a1SPatrick Sanan     MatNullSpace nearnullspace,sub_nearnullspace;
897392968a1SPatrick Sanan     ierr = MatGetNullSpace(B,&nearnullspace);CHKERRQ(ierr);
898392968a1SPatrick Sanan     if (nearnullspace) {
899392968a1SPatrick Sanan       ierr = PetscInfo(pc,"PCTelescope: generating near nullspace (DMDA)\n");CHKERRQ(ierr);
900392968a1SPatrick Sanan       ierr = PCTelescopeSubNullSpaceCreate_dmda_Telescope(pc,sred,nearnullspace,&sub_nearnullspace);CHKERRQ(ierr);
901392968a1SPatrick Sanan       if (isActiveRank(sred->psubcomm)) {
902392968a1SPatrick Sanan         ierr = MatSetNullSpace(sub_mat,sub_nearnullspace);CHKERRQ(ierr);
903392968a1SPatrick Sanan         ierr = MatNullSpaceDestroy(&sub_nearnullspace);CHKERRQ(ierr);
904392968a1SPatrick Sanan       }
905392968a1SPatrick Sanan     }
906392968a1SPatrick Sanan   }
9071e07b27eSBarry Smith   PetscFunctionReturn(0);
9081e07b27eSBarry Smith }
9091e07b27eSBarry Smith 
9101e07b27eSBarry Smith PetscErrorCode PCApply_Telescope_dmda(PC pc,Vec x,Vec y)
9111e07b27eSBarry Smith {
9121e07b27eSBarry Smith   PC_Telescope      sred = (PC_Telescope)pc->data;
9131e07b27eSBarry Smith   PetscErrorCode    ierr;
9141e07b27eSBarry Smith   Mat               perm;
9151e07b27eSBarry Smith   Vec               xtmp,xp,xred,yred;
91613c30530SDave May   PetscInt          i,st,ed;
9171e07b27eSBarry Smith   VecScatter        scatter;
9181e07b27eSBarry Smith   PetscScalar       *array;
9191e07b27eSBarry Smith   const PetscScalar *x_array;
9201e07b27eSBarry Smith   PC_Telescope_DMDACtx *ctx;
9211e07b27eSBarry Smith 
9221e07b27eSBarry Smith   ctx = (PC_Telescope_DMDACtx*)sred->dm_ctx;
9231e07b27eSBarry Smith   xtmp    = sred->xtmp;
9241e07b27eSBarry Smith   scatter = sred->scatter;
9251e07b27eSBarry Smith   xred    = sred->xred;
9261e07b27eSBarry Smith   yred    = sred->yred;
9271e07b27eSBarry Smith   perm  = ctx->permutation;
9281e07b27eSBarry Smith   xp    = ctx->xp;
9291e07b27eSBarry Smith 
9301e07b27eSBarry Smith   PetscFunctionBegin;
931bf00f589SPatrick Sanan   ierr = PetscCitationsRegister(citation,&cited);CHKERRQ(ierr);
93214c9fce5SDave May 
9331e07b27eSBarry Smith   /* permute vector into ordering associated with re-partitioned dmda */
9341e07b27eSBarry Smith   ierr = MatMultTranspose(perm,x,xp);CHKERRQ(ierr);
9351e07b27eSBarry Smith 
9361e07b27eSBarry Smith   /* pull in vector x->xtmp */
9371e07b27eSBarry Smith   ierr = VecScatterBegin(scatter,xp,xtmp,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
9381e07b27eSBarry Smith   ierr = VecScatterEnd(scatter,xp,xtmp,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
9391e07b27eSBarry Smith 
9401e07b27eSBarry Smith   /* copy vector entires into xred */
9411e07b27eSBarry Smith   ierr = VecGetArrayRead(xtmp,&x_array);CHKERRQ(ierr);
9421e07b27eSBarry Smith   if (xred) {
9431e07b27eSBarry Smith     PetscScalar *LA_xred;
9441e07b27eSBarry Smith     ierr = VecGetOwnershipRange(xred,&st,&ed);CHKERRQ(ierr);
9451e07b27eSBarry Smith 
9461e07b27eSBarry Smith     ierr = VecGetArray(xred,&LA_xred);CHKERRQ(ierr);
9471e07b27eSBarry Smith     for (i=0; i<ed-st; i++) {
9481e07b27eSBarry Smith       LA_xred[i] = x_array[i];
9491e07b27eSBarry Smith     }
9501e07b27eSBarry Smith     ierr = VecRestoreArray(xred,&LA_xred);CHKERRQ(ierr);
9511e07b27eSBarry Smith   }
9521e07b27eSBarry Smith   ierr = VecRestoreArrayRead(xtmp,&x_array);CHKERRQ(ierr);
9531e07b27eSBarry Smith 
9541e07b27eSBarry Smith   /* solve */
9551e07b27eSBarry Smith   if (isActiveRank(sred->psubcomm)) {
9561e07b27eSBarry Smith     ierr = KSPSolve(sred->ksp,xred,yred);CHKERRQ(ierr);
9571e07b27eSBarry Smith   }
9581e07b27eSBarry Smith 
9591e07b27eSBarry Smith   /* return vector */
9601e07b27eSBarry Smith   ierr = VecGetArray(xtmp,&array);CHKERRQ(ierr);
9611e07b27eSBarry Smith   if (yred) {
9621e07b27eSBarry Smith     const PetscScalar *LA_yred;
9631e07b27eSBarry Smith     ierr = VecGetOwnershipRange(yred,&st,&ed);CHKERRQ(ierr);
9641e07b27eSBarry Smith     ierr = VecGetArrayRead(yred,&LA_yred);CHKERRQ(ierr);
9651e07b27eSBarry Smith     for (i=0; i<ed-st; i++) {
9661e07b27eSBarry Smith       array[i] = LA_yred[i];
9671e07b27eSBarry Smith     }
9681e07b27eSBarry Smith     ierr = VecRestoreArrayRead(yred,&LA_yred);CHKERRQ(ierr);
9691e07b27eSBarry Smith   }
9701e07b27eSBarry Smith   ierr = VecRestoreArray(xtmp,&array);CHKERRQ(ierr);
9711e07b27eSBarry Smith   ierr = VecScatterBegin(scatter,xtmp,xp,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
9721e07b27eSBarry Smith   ierr = VecScatterEnd(scatter,xtmp,xp,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
9731e07b27eSBarry Smith   ierr = MatMult(perm,xp,y);CHKERRQ(ierr);
9741e07b27eSBarry Smith   PetscFunctionReturn(0);
9751e07b27eSBarry Smith }
9761e07b27eSBarry Smith 
977f650675bSDave May PetscErrorCode PCApplyRichardson_Telescope_dmda(PC pc,Vec x,Vec y,Vec w,PetscReal rtol,PetscReal abstol, PetscReal dtol,PetscInt its,PetscBool zeroguess,PetscInt *outits,PCRichardsonConvergedReason *reason)
978f650675bSDave May {
979f650675bSDave May   PC_Telescope      sred = (PC_Telescope)pc->data;
980f650675bSDave May   PetscErrorCode    ierr;
981f650675bSDave May   Mat               perm;
982a1d91a28SDave May   Vec               xtmp,xp,yred;
983f650675bSDave May   PetscInt          i,st,ed;
984f650675bSDave May   VecScatter        scatter;
985f650675bSDave May   const PetscScalar *x_array;
986c41e779fSDave May   PetscBool         default_init_guess_value = PETSC_FALSE;
987f650675bSDave May   PC_Telescope_DMDACtx *ctx;
988f650675bSDave May 
989f650675bSDave May   ctx = (PC_Telescope_DMDACtx*)sred->dm_ctx;
990f650675bSDave May   xtmp    = sred->xtmp;
991f650675bSDave May   scatter = sred->scatter;
992f650675bSDave May   yred    = sred->yred;
993f650675bSDave May   perm  = ctx->permutation;
994f650675bSDave May   xp    = ctx->xp;
995f650675bSDave May 
996f650675bSDave May   if (its > 1) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"PCApplyRichardson_Telescope_dmda only supports max_it = 1");
997f650675bSDave May   *reason = (PCRichardsonConvergedReason)0;
998f650675bSDave May 
999f650675bSDave May   if (!zeroguess) {
1000f650675bSDave May     ierr = PetscInfo(pc,"PCTelescopeDMDA: Scattering y for non-zero-initial guess\n");CHKERRQ(ierr);
1001f650675bSDave May     /* permute vector into ordering associated with re-partitioned dmda */
1002f650675bSDave May     ierr = MatMultTranspose(perm,y,xp);CHKERRQ(ierr);
1003f650675bSDave May 
1004f650675bSDave May     /* pull in vector x->xtmp */
1005f650675bSDave May     ierr = VecScatterBegin(scatter,xp,xtmp,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1006f650675bSDave May     ierr = VecScatterEnd(scatter,xp,xtmp,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1007f650675bSDave May 
1008f650675bSDave May     /* copy vector entires into xred */
1009f650675bSDave May     ierr = VecGetArrayRead(xtmp,&x_array);CHKERRQ(ierr);
1010f650675bSDave May     if (yred) {
1011f650675bSDave May       PetscScalar *LA_yred;
1012f650675bSDave May       ierr = VecGetOwnershipRange(yred,&st,&ed);CHKERRQ(ierr);
1013f650675bSDave May       ierr = VecGetArray(yred,&LA_yred);CHKERRQ(ierr);
1014f650675bSDave May       for (i=0; i<ed-st; i++) {
1015f650675bSDave May         LA_yred[i] = x_array[i];
1016f650675bSDave May       }
1017f650675bSDave May       ierr = VecRestoreArray(yred,&LA_yred);CHKERRQ(ierr);
1018f650675bSDave May     }
1019f650675bSDave May     ierr = VecRestoreArrayRead(xtmp,&x_array);CHKERRQ(ierr);
1020f650675bSDave May   }
1021f650675bSDave May 
1022f650675bSDave May   if (isActiveRank(sred->psubcomm)) {
1023f650675bSDave May     ierr = KSPGetInitialGuessNonzero(sred->ksp,&default_init_guess_value);CHKERRQ(ierr);
1024f650675bSDave May     if (!zeroguess) ierr = KSPSetInitialGuessNonzero(sred->ksp,PETSC_TRUE);CHKERRQ(ierr);
1025f650675bSDave May   }
1026f650675bSDave May 
1027f650675bSDave May   ierr = PCApply_Telescope_dmda(pc,x,y);CHKERRQ(ierr);
1028f650675bSDave May 
1029f650675bSDave May   if (isActiveRank(sred->psubcomm)) {
1030f650675bSDave May     ierr = KSPSetInitialGuessNonzero(sred->ksp,default_init_guess_value);CHKERRQ(ierr);
1031f650675bSDave May   }
1032f650675bSDave May 
1033f650675bSDave May   if (!*reason) *reason = PCRICHARDSON_CONVERGED_ITS;
1034f650675bSDave May   *outits = 1;
1035f650675bSDave May   PetscFunctionReturn(0);
1036f650675bSDave May }
1037f650675bSDave May 
10381e07b27eSBarry Smith PetscErrorCode PCReset_Telescope_dmda(PC pc)
10391e07b27eSBarry Smith {
10401e07b27eSBarry Smith   PetscErrorCode       ierr;
10411e07b27eSBarry Smith   PC_Telescope         sred = (PC_Telescope)pc->data;
10421e07b27eSBarry Smith   PC_Telescope_DMDACtx *ctx;
10431e07b27eSBarry Smith 
10441e07b27eSBarry Smith   PetscFunctionBegin;
10451e07b27eSBarry Smith   ctx = (PC_Telescope_DMDACtx*)sred->dm_ctx;
10461e07b27eSBarry Smith   ierr = VecDestroy(&ctx->xp);CHKERRQ(ierr);
10471e07b27eSBarry Smith   ierr = MatDestroy(&ctx->permutation);CHKERRQ(ierr);
10481e07b27eSBarry Smith   ierr = DMDestroy(&ctx->dmrepart);CHKERRQ(ierr);
10491e07b27eSBarry Smith   ierr = PetscFree(ctx->range_i_re);CHKERRQ(ierr);
10501e07b27eSBarry Smith   ierr = PetscFree(ctx->range_j_re);CHKERRQ(ierr);
10511e07b27eSBarry Smith   ierr = PetscFree(ctx->range_k_re);CHKERRQ(ierr);
10521e07b27eSBarry Smith   ierr = PetscFree(ctx->start_i_re);CHKERRQ(ierr);
10531e07b27eSBarry Smith   ierr = PetscFree(ctx->start_j_re);CHKERRQ(ierr);
10541e07b27eSBarry Smith   ierr = PetscFree(ctx->start_k_re);CHKERRQ(ierr);
10551e07b27eSBarry Smith   PetscFunctionReturn(0);
10561e07b27eSBarry Smith }
10571e07b27eSBarry Smith 
10588ef9ca65SPatrick Sanan PetscErrorCode DMView_DA_Short_3d(DM dm,PetscViewer v)
10591e07b27eSBarry Smith {
10601e07b27eSBarry Smith   PetscInt       M,N,P,m,n,p,ndof,nsw;
10611e07b27eSBarry Smith   MPI_Comm       comm;
10621e07b27eSBarry Smith   PetscMPIInt    size;
10631e07b27eSBarry Smith   const char*    prefix;
10641e07b27eSBarry Smith   PetscErrorCode ierr;
10651e07b27eSBarry Smith 
10661e07b27eSBarry Smith   PetscFunctionBegin;
10671e07b27eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)dm,&comm);CHKERRQ(ierr);
10681e07b27eSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
10691e07b27eSBarry Smith   ierr = DMGetOptionsPrefix(dm,&prefix);CHKERRQ(ierr);
10701e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,NULL,&M,&N,&P,&m,&n,&p,&ndof,&nsw,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
10711e07b27eSBarry Smith   if (prefix) {ierr = PetscViewerASCIIPrintf(v,"DMDA Object:    (%s)    %d MPI processes\n",prefix,size);CHKERRQ(ierr);}
10721e07b27eSBarry Smith   else {ierr = PetscViewerASCIIPrintf(v,"DMDA Object:    %d MPI processes\n",size);CHKERRQ(ierr);}
10731e07b27eSBarry Smith   ierr = PetscViewerASCIIPrintf(v,"  M %D N %D P %D m %D n %D p %D dof %D overlap %D\n",M,N,P,m,n,p,ndof,nsw);CHKERRQ(ierr);
10741e07b27eSBarry Smith   PetscFunctionReturn(0);
10751e07b27eSBarry Smith }
10761e07b27eSBarry Smith 
10778ef9ca65SPatrick Sanan PetscErrorCode DMView_DA_Short_2d(DM dm,PetscViewer v)
10781e07b27eSBarry Smith {
10791e07b27eSBarry Smith   PetscInt       M,N,m,n,ndof,nsw;
10801e07b27eSBarry Smith   MPI_Comm       comm;
10811e07b27eSBarry Smith   PetscMPIInt    size;
10821e07b27eSBarry Smith   const char*    prefix;
10831e07b27eSBarry Smith   PetscErrorCode ierr;
10841e07b27eSBarry Smith 
10851e07b27eSBarry Smith   PetscFunctionBegin;
10861e07b27eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)dm,&comm);CHKERRQ(ierr);
10871e07b27eSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
10881e07b27eSBarry Smith   ierr = DMGetOptionsPrefix(dm,&prefix);CHKERRQ(ierr);
10891e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,NULL,&M,&N,NULL,&m,&n,NULL,&ndof,&nsw,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
10901e07b27eSBarry Smith   if (prefix) {PetscViewerASCIIPrintf(v,"DMDA Object:    (%s)    %d MPI processes\n",prefix,size);CHKERRQ(ierr);}
10911e07b27eSBarry Smith   else {ierr = PetscViewerASCIIPrintf(v,"DMDA Object:    %d MPI processes\n",size);CHKERRQ(ierr);}
10921e07b27eSBarry Smith   ierr = PetscViewerASCIIPrintf(v,"  M %D N %D m %D n %D dof %D overlap %D\n",M,N,m,n,ndof,nsw);CHKERRQ(ierr);
10931e07b27eSBarry Smith   PetscFunctionReturn(0);
10941e07b27eSBarry Smith }
10951e07b27eSBarry Smith 
10968ef9ca65SPatrick Sanan PetscErrorCode DMView_DA_Short(DM dm,PetscViewer v)
10971e07b27eSBarry Smith {
10981e07b27eSBarry Smith   PetscErrorCode ierr;
10991e07b27eSBarry Smith   PetscInt       dim;
11001e07b27eSBarry Smith 
11011e07b27eSBarry Smith   PetscFunctionBegin;
11021e07b27eSBarry Smith   ierr = DMDAGetInfo(dm,&dim,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL);CHKERRQ(ierr);
11031e07b27eSBarry Smith   switch (dim) {
11048ef9ca65SPatrick Sanan   case 2: ierr = DMView_DA_Short_2d(dm,v);CHKERRQ(ierr);
11051e07b27eSBarry Smith     break;
11068ef9ca65SPatrick Sanan   case 3: ierr = DMView_DA_Short_3d(dm,v);CHKERRQ(ierr);
11071e07b27eSBarry Smith     break;
11081e07b27eSBarry Smith   }
11091e07b27eSBarry Smith   PetscFunctionReturn(0);
11101e07b27eSBarry Smith }
11111e07b27eSBarry Smith 
1112