11e07b27eSBarry Smith 2120bdd93SDave May #include <petsc/private/matimpl.h> 31e07b27eSBarry Smith #include <petsc/private/pcimpl.h> 45e897e82SDave May #include <petsc/private/dmimpl.h> 51e07b27eSBarry Smith #include <petscksp.h> /*I "petscksp.h" I*/ 61e07b27eSBarry Smith #include <petscdm.h> 71e07b27eSBarry Smith #include <petscdmda.h> 81e07b27eSBarry Smith 9575a0592SBarry Smith #include "../src/ksp/pc/impls/telescope/telescope.h" 101e07b27eSBarry Smith 11bf00f589SPatrick Sanan static PetscBool cited = PETSC_FALSE; 129371c9d4SSatish Balay static const char citation[] = "@inproceedings{MaySananRuppKnepleySmith2016,\n" 13bf00f589SPatrick Sanan " title = {Extreme-Scale Multigrid Components within PETSc},\n" 14bf00f589SPatrick Sanan " author = {Dave A. May and Patrick Sanan and Karl Rupp and Matthew G. Knepley and Barry F. Smith},\n" 15bf00f589SPatrick Sanan " booktitle = {Proceedings of the Platform for Advanced Scientific Computing Conference},\n" 16bf00f589SPatrick Sanan " series = {PASC '16},\n" 17bf00f589SPatrick Sanan " isbn = {978-1-4503-4126-4},\n" 18bf00f589SPatrick Sanan " location = {Lausanne, Switzerland},\n" 19bf00f589SPatrick Sanan " pages = {5:1--5:12},\n" 20bf00f589SPatrick Sanan " articleno = {5},\n" 21bf00f589SPatrick Sanan " numpages = {12},\n" 22a8d69d7bSBarry Smith " url = {https://doi.acm.org/10.1145/2929908.2929913},\n" 23bf00f589SPatrick Sanan " doi = {10.1145/2929908.2929913},\n" 24bf00f589SPatrick Sanan " acmid = {2929913},\n" 25bf00f589SPatrick Sanan " publisher = {ACM},\n" 26bf00f589SPatrick Sanan " address = {New York, NY, USA},\n" 27bf00f589SPatrick Sanan " keywords = {GPU, HPC, agglomeration, coarse-level solver, multigrid, parallel computing, preconditioning},\n" 28bf00f589SPatrick Sanan " year = {2016}\n" 29bf00f589SPatrick Sanan "}\n"; 30bf00f589SPatrick Sanan 319371c9d4SSatish Balay static PetscErrorCode _DMDADetermineRankFromGlobalIJK(PetscInt dim, PetscInt i, PetscInt j, PetscInt k, PetscInt Mp, PetscInt Np, PetscInt Pp, PetscInt start_i[], PetscInt start_j[], PetscInt start_k[], PetscInt span_i[], PetscInt span_j[], PetscInt span_k[], PetscMPIInt *_pi, PetscMPIInt *_pj, PetscMPIInt *_pk, PetscMPIInt *rank_re) { 321e07b27eSBarry Smith PetscInt pi, pj, pk, n; 331e07b27eSBarry Smith 341e07b27eSBarry Smith PetscFunctionBegin; 35137d0469SJed Brown *rank_re = -1; 36137d0469SJed Brown if (_pi) *_pi = -1; 37137d0469SJed Brown if (_pj) *_pj = -1; 38137d0469SJed Brown if (_pk) *_pk = -1; 391e07b27eSBarry Smith pi = pj = pk = -1; 401e07b27eSBarry Smith if (_pi) { 411e07b27eSBarry Smith for (n = 0; n < Mp; n++) { 421e07b27eSBarry Smith if ((i >= start_i[n]) && (i < start_i[n] + span_i[n])) { 431e07b27eSBarry Smith pi = n; 441e07b27eSBarry Smith break; 451e07b27eSBarry Smith } 461e07b27eSBarry Smith } 4763a3b9bcSJacob Faibussowitsch PetscCheck(pi != -1, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmda-ijk] pi cannot be determined : range %" PetscInt_FMT ", val %" PetscInt_FMT, Mp, i); 481e07b27eSBarry Smith *_pi = pi; 491e07b27eSBarry Smith } 501e07b27eSBarry Smith 511e07b27eSBarry Smith if (_pj) { 521e07b27eSBarry Smith for (n = 0; n < Np; n++) { 531e07b27eSBarry Smith if ((j >= start_j[n]) && (j < start_j[n] + span_j[n])) { 541e07b27eSBarry Smith pj = n; 551e07b27eSBarry Smith break; 561e07b27eSBarry Smith } 571e07b27eSBarry Smith } 5863a3b9bcSJacob Faibussowitsch PetscCheck(pj != -1, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmda-ijk] pj cannot be determined : range %" PetscInt_FMT ", val %" PetscInt_FMT, Np, j); 591e07b27eSBarry Smith *_pj = pj; 601e07b27eSBarry Smith } 611e07b27eSBarry Smith 621e07b27eSBarry Smith if (_pk) { 631e07b27eSBarry Smith for (n = 0; n < Pp; n++) { 641e07b27eSBarry Smith if ((k >= start_k[n]) && (k < start_k[n] + span_k[n])) { 651e07b27eSBarry Smith pk = n; 661e07b27eSBarry Smith break; 671e07b27eSBarry Smith } 681e07b27eSBarry Smith } 6963a3b9bcSJacob Faibussowitsch PetscCheck(pk != -1, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmda-ijk] pk cannot be determined : range %" PetscInt_FMT ", val %" PetscInt_FMT, Pp, k); 701e07b27eSBarry Smith *_pk = pk; 711e07b27eSBarry Smith } 721e07b27eSBarry Smith 731e07b27eSBarry Smith switch (dim) { 749371c9d4SSatish Balay case 1: *rank_re = pi; break; 759371c9d4SSatish Balay case 2: *rank_re = pi + pj * Mp; break; 769371c9d4SSatish Balay case 3: *rank_re = pi + pj * Mp + pk * (Mp * Np); break; 771e07b27eSBarry Smith } 781e07b27eSBarry Smith PetscFunctionReturn(0); 791e07b27eSBarry Smith } 801e07b27eSBarry Smith 819371c9d4SSatish Balay static PetscErrorCode _DMDADetermineGlobalS0(PetscInt dim, PetscMPIInt rank_re, PetscInt Mp_re, PetscInt Np_re, PetscInt Pp_re, PetscInt range_i_re[], PetscInt range_j_re[], PetscInt range_k_re[], PetscInt *s0) { 82c6a0d831SBarry Smith PetscInt i, j, k, start_IJK = 0; 831e07b27eSBarry Smith PetscInt rank_ijk; 841e07b27eSBarry Smith 851e07b27eSBarry Smith PetscFunctionBegin; 861e07b27eSBarry Smith switch (dim) { 871e07b27eSBarry Smith case 1: 881e07b27eSBarry Smith for (i = 0; i < Mp_re; i++) { 891e07b27eSBarry Smith rank_ijk = i; 909371c9d4SSatish Balay if (rank_ijk < rank_re) { start_IJK += range_i_re[i]; } 911e07b27eSBarry Smith } 921e07b27eSBarry Smith break; 931e07b27eSBarry Smith case 2: 941e07b27eSBarry Smith for (j = 0; j < Np_re; j++) { 951e07b27eSBarry Smith for (i = 0; i < Mp_re; i++) { 961e07b27eSBarry Smith rank_ijk = i + j * Mp_re; 979371c9d4SSatish Balay if (rank_ijk < rank_re) { start_IJK += range_i_re[i] * range_j_re[j]; } 981e07b27eSBarry Smith } 991e07b27eSBarry Smith } 1001e07b27eSBarry Smith break; 1011e07b27eSBarry Smith case 3: 1021e07b27eSBarry Smith for (k = 0; k < Pp_re; k++) { 1031e07b27eSBarry Smith for (j = 0; j < Np_re; j++) { 1041e07b27eSBarry Smith for (i = 0; i < Mp_re; i++) { 1051e07b27eSBarry Smith rank_ijk = i + j * Mp_re + k * Mp_re * Np_re; 1069371c9d4SSatish Balay if (rank_ijk < rank_re) { start_IJK += range_i_re[i] * range_j_re[j] * range_k_re[k]; } 1071e07b27eSBarry Smith } 1081e07b27eSBarry Smith } 1091e07b27eSBarry Smith } 1101e07b27eSBarry Smith break; 1111e07b27eSBarry Smith } 1121e07b27eSBarry Smith *s0 = start_IJK; 1131e07b27eSBarry Smith PetscFunctionReturn(0); 1141e07b27eSBarry Smith } 1151e07b27eSBarry Smith 1169371c9d4SSatish Balay static PetscErrorCode PCTelescopeSetUp_dmda_repart_coors2d(PC_Telescope sred, DM dm, DM subdm) { 1171e07b27eSBarry Smith DM cdm; 1181e07b27eSBarry Smith Vec coor, coor_natural, perm_coors; 1191e07b27eSBarry Smith PetscInt i, j, si, sj, ni, nj, M, N, Ml, Nl, c, nidx; 1201e07b27eSBarry Smith PetscInt *fine_indices; 1211e07b27eSBarry Smith IS is_fine, is_local; 1221e07b27eSBarry Smith VecScatter sctx; 1231e07b27eSBarry Smith 1241e07b27eSBarry Smith PetscFunctionBegin; 1259566063dSJacob Faibussowitsch PetscCall(DMGetCoordinates(dm, &coor)); 1261e07b27eSBarry Smith if (!coor) return (0); 127*48a46eb9SPierre Jolivet if (PCTelescope_isActiveRank(sred)) PetscCall(DMDASetUniformCoordinates(subdm, 0.0, 1.0, 0.0, 1.0, 0.0, 1.0)); 1281e07b27eSBarry Smith /* Get the coordinate vector from the distributed array */ 1299566063dSJacob Faibussowitsch PetscCall(DMGetCoordinateDM(dm, &cdm)); 1309566063dSJacob Faibussowitsch PetscCall(DMDACreateNaturalVector(cdm, &coor_natural)); 1311e07b27eSBarry Smith 1329566063dSJacob Faibussowitsch PetscCall(DMDAGlobalToNaturalBegin(cdm, coor, INSERT_VALUES, coor_natural)); 1339566063dSJacob Faibussowitsch PetscCall(DMDAGlobalToNaturalEnd(cdm, coor, INSERT_VALUES, coor_natural)); 1341e07b27eSBarry Smith 1351e07b27eSBarry Smith /* get indices of the guys I want to grab */ 1369566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, NULL, &M, &N, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL)); 13757f12427SDave May if (PCTelescope_isActiveRank(sred)) { 1389566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(subdm, &si, &sj, NULL, &ni, &nj, NULL)); 13915dd08bcSBarry Smith Ml = ni; 14015dd08bcSBarry Smith Nl = nj; 1411e07b27eSBarry Smith } else { 142c41e779fSDave May si = sj = 0; 143c41e779fSDave May ni = nj = 0; 1443ac26c5eSBarry Smith Ml = Nl = 0; 1451e07b27eSBarry Smith } 1461e07b27eSBarry Smith 1479566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(Ml * Nl * 2, &fine_indices)); 1481e07b27eSBarry Smith c = 0; 14957f12427SDave May if (PCTelescope_isActiveRank(sred)) { 1501e07b27eSBarry Smith for (j = sj; j < sj + nj; j++) { 1511e07b27eSBarry Smith for (i = si; i < si + ni; i++) { 1521e07b27eSBarry Smith nidx = (i) + (j)*M; 1531e07b27eSBarry Smith fine_indices[c] = 2 * nidx; 1541e07b27eSBarry Smith fine_indices[c + 1] = 2 * nidx + 1; 1551e07b27eSBarry Smith c = c + 2; 1561e07b27eSBarry Smith } 1571e07b27eSBarry Smith } 15863a3b9bcSJacob Faibussowitsch PetscCheck(c == Ml * Nl * 2, PETSC_COMM_SELF, PETSC_ERR_PLIB, "c %" PetscInt_FMT " should equal 2 * Ml %" PetscInt_FMT " * Nl %" PetscInt_FMT, c, Ml, Nl); 1591e07b27eSBarry Smith } 1601e07b27eSBarry Smith 1611e07b27eSBarry Smith /* generate scatter */ 1629566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PetscObjectComm((PetscObject)dm), Ml * Nl * 2, fine_indices, PETSC_USE_POINTER, &is_fine)); 1639566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, Ml * Nl * 2, 0, 1, &is_local)); 1641e07b27eSBarry Smith 1651e07b27eSBarry Smith /* scatter */ 1669566063dSJacob Faibussowitsch PetscCall(VecCreate(PETSC_COMM_SELF, &perm_coors)); 1679566063dSJacob Faibussowitsch PetscCall(VecSetSizes(perm_coors, PETSC_DECIDE, Ml * Nl * 2)); 1689566063dSJacob Faibussowitsch PetscCall(VecSetType(perm_coors, VECSEQ)); 1691e07b27eSBarry Smith 1709566063dSJacob Faibussowitsch PetscCall(VecScatterCreate(coor_natural, is_fine, perm_coors, is_local, &sctx)); 1719566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(sctx, coor_natural, perm_coors, INSERT_VALUES, SCATTER_FORWARD)); 1729566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(sctx, coor_natural, perm_coors, INSERT_VALUES, SCATTER_FORWARD)); 1731e07b27eSBarry Smith /* access */ 17457f12427SDave May if (PCTelescope_isActiveRank(sred)) { 1751e07b27eSBarry Smith Vec _coors; 1761e07b27eSBarry Smith const PetscScalar *LA_perm; 1771e07b27eSBarry Smith PetscScalar *LA_coors; 1781e07b27eSBarry Smith 1799566063dSJacob Faibussowitsch PetscCall(DMGetCoordinates(subdm, &_coors)); 1809566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(perm_coors, &LA_perm)); 1819566063dSJacob Faibussowitsch PetscCall(VecGetArray(_coors, &LA_coors)); 1829371c9d4SSatish Balay for (i = 0; i < Ml * Nl * 2; i++) { LA_coors[i] = LA_perm[i]; } 1839566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(_coors, &LA_coors)); 1849566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(perm_coors, &LA_perm)); 1851e07b27eSBarry Smith } 1861e07b27eSBarry Smith 1871e07b27eSBarry Smith /* update local coords */ 18857f12427SDave May if (PCTelescope_isActiveRank(sred)) { 1891e07b27eSBarry Smith DM _dmc; 1901e07b27eSBarry Smith Vec _coors, _coors_local; 1919566063dSJacob Faibussowitsch PetscCall(DMGetCoordinateDM(subdm, &_dmc)); 1929566063dSJacob Faibussowitsch PetscCall(DMGetCoordinates(subdm, &_coors)); 1939566063dSJacob Faibussowitsch PetscCall(DMGetCoordinatesLocal(subdm, &_coors_local)); 1949566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(_dmc, _coors, INSERT_VALUES, _coors_local)); 1959566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(_dmc, _coors, INSERT_VALUES, _coors_local)); 1961e07b27eSBarry Smith } 1979566063dSJacob Faibussowitsch PetscCall(VecScatterDestroy(&sctx)); 1989566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is_fine)); 1999566063dSJacob Faibussowitsch PetscCall(PetscFree(fine_indices)); 2009566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is_local)); 2019566063dSJacob Faibussowitsch PetscCall(VecDestroy(&perm_coors)); 2029566063dSJacob Faibussowitsch PetscCall(VecDestroy(&coor_natural)); 2031e07b27eSBarry Smith PetscFunctionReturn(0); 2041e07b27eSBarry Smith } 2051e07b27eSBarry Smith 2069371c9d4SSatish Balay static PetscErrorCode PCTelescopeSetUp_dmda_repart_coors3d(PC_Telescope sred, DM dm, DM subdm) { 2071e07b27eSBarry Smith DM cdm; 2081e07b27eSBarry Smith Vec coor, coor_natural, perm_coors; 2091e07b27eSBarry Smith PetscInt i, j, k, si, sj, sk, ni, nj, nk, M, N, P, Ml, Nl, Pl, c, nidx; 2101e07b27eSBarry Smith PetscInt *fine_indices; 2111e07b27eSBarry Smith IS is_fine, is_local; 2121e07b27eSBarry Smith VecScatter sctx; 2131e07b27eSBarry Smith 2141e07b27eSBarry Smith PetscFunctionBegin; 2159566063dSJacob Faibussowitsch PetscCall(DMGetCoordinates(dm, &coor)); 2161e07b27eSBarry Smith if (!coor) PetscFunctionReturn(0); 2171e07b27eSBarry Smith 218*48a46eb9SPierre Jolivet if (PCTelescope_isActiveRank(sred)) PetscCall(DMDASetUniformCoordinates(subdm, 0.0, 1.0, 0.0, 1.0, 0.0, 1.0)); 2191e07b27eSBarry Smith 2201e07b27eSBarry Smith /* Get the coordinate vector from the distributed array */ 2219566063dSJacob Faibussowitsch PetscCall(DMGetCoordinateDM(dm, &cdm)); 2229566063dSJacob Faibussowitsch PetscCall(DMDACreateNaturalVector(cdm, &coor_natural)); 2239566063dSJacob Faibussowitsch PetscCall(DMDAGlobalToNaturalBegin(cdm, coor, INSERT_VALUES, coor_natural)); 2249566063dSJacob Faibussowitsch PetscCall(DMDAGlobalToNaturalEnd(cdm, coor, INSERT_VALUES, coor_natural)); 2251e07b27eSBarry Smith 2261e07b27eSBarry Smith /* get indices of the guys I want to grab */ 2279566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, NULL, &M, &N, &P, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL)); 2281e07b27eSBarry Smith 22957f12427SDave May if (PCTelescope_isActiveRank(sred)) { 2309566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(subdm, &si, &sj, &sk, &ni, &nj, &nk)); 231553d0ae9SBarry Smith Ml = ni; 232553d0ae9SBarry Smith Nl = nj; 233553d0ae9SBarry Smith Pl = nk; 2341e07b27eSBarry Smith } else { 235c41e779fSDave May si = sj = sk = 0; 236c41e779fSDave May ni = nj = nk = 0; 2373ac26c5eSBarry Smith Ml = Nl = Pl = 0; 2381e07b27eSBarry Smith } 2391e07b27eSBarry Smith 2409566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(Ml * Nl * Pl * 3, &fine_indices)); 2411e07b27eSBarry Smith 2421e07b27eSBarry Smith c = 0; 24357f12427SDave May if (PCTelescope_isActiveRank(sred)) { 2441e07b27eSBarry Smith for (k = sk; k < sk + nk; k++) { 2451e07b27eSBarry Smith for (j = sj; j < sj + nj; j++) { 2461e07b27eSBarry Smith for (i = si; i < si + ni; i++) { 2471e07b27eSBarry Smith nidx = (i) + (j)*M + (k)*M * N; 2481e07b27eSBarry Smith fine_indices[c] = 3 * nidx; 2491e07b27eSBarry Smith fine_indices[c + 1] = 3 * nidx + 1; 2501e07b27eSBarry Smith fine_indices[c + 2] = 3 * nidx + 2; 2511e07b27eSBarry Smith c = c + 3; 2521e07b27eSBarry Smith } 2531e07b27eSBarry Smith } 2541e07b27eSBarry Smith } 2551e07b27eSBarry Smith } 2561e07b27eSBarry Smith 2571e07b27eSBarry Smith /* generate scatter */ 2589566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PetscObjectComm((PetscObject)dm), Ml * Nl * Pl * 3, fine_indices, PETSC_USE_POINTER, &is_fine)); 2599566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, Ml * Nl * Pl * 3, 0, 1, &is_local)); 2601e07b27eSBarry Smith 2611e07b27eSBarry Smith /* scatter */ 2629566063dSJacob Faibussowitsch PetscCall(VecCreate(PETSC_COMM_SELF, &perm_coors)); 2639566063dSJacob Faibussowitsch PetscCall(VecSetSizes(perm_coors, PETSC_DECIDE, Ml * Nl * Pl * 3)); 2649566063dSJacob Faibussowitsch PetscCall(VecSetType(perm_coors, VECSEQ)); 2659566063dSJacob Faibussowitsch PetscCall(VecScatterCreate(coor_natural, is_fine, perm_coors, is_local, &sctx)); 2669566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(sctx, coor_natural, perm_coors, INSERT_VALUES, SCATTER_FORWARD)); 2679566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(sctx, coor_natural, perm_coors, INSERT_VALUES, SCATTER_FORWARD)); 2681e07b27eSBarry Smith 2691e07b27eSBarry Smith /* access */ 27057f12427SDave May if (PCTelescope_isActiveRank(sred)) { 2711e07b27eSBarry Smith Vec _coors; 2721e07b27eSBarry Smith const PetscScalar *LA_perm; 2731e07b27eSBarry Smith PetscScalar *LA_coors; 2741e07b27eSBarry Smith 2759566063dSJacob Faibussowitsch PetscCall(DMGetCoordinates(subdm, &_coors)); 2769566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(perm_coors, &LA_perm)); 2779566063dSJacob Faibussowitsch PetscCall(VecGetArray(_coors, &LA_coors)); 2789371c9d4SSatish Balay for (i = 0; i < Ml * Nl * Pl * 3; i++) { LA_coors[i] = LA_perm[i]; } 2799566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(_coors, &LA_coors)); 2809566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(perm_coors, &LA_perm)); 2811e07b27eSBarry Smith } 2821e07b27eSBarry Smith 2831e07b27eSBarry Smith /* update local coords */ 28457f12427SDave May if (PCTelescope_isActiveRank(sred)) { 2851e07b27eSBarry Smith DM _dmc; 2861e07b27eSBarry Smith Vec _coors, _coors_local; 2871e07b27eSBarry Smith 2889566063dSJacob Faibussowitsch PetscCall(DMGetCoordinateDM(subdm, &_dmc)); 2899566063dSJacob Faibussowitsch PetscCall(DMGetCoordinates(subdm, &_coors)); 2909566063dSJacob Faibussowitsch PetscCall(DMGetCoordinatesLocal(subdm, &_coors_local)); 2919566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(_dmc, _coors, INSERT_VALUES, _coors_local)); 2929566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(_dmc, _coors, INSERT_VALUES, _coors_local)); 2931e07b27eSBarry Smith } 2941e07b27eSBarry Smith 2959566063dSJacob Faibussowitsch PetscCall(VecScatterDestroy(&sctx)); 2969566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is_fine)); 2979566063dSJacob Faibussowitsch PetscCall(PetscFree(fine_indices)); 2989566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is_local)); 2999566063dSJacob Faibussowitsch PetscCall(VecDestroy(&perm_coors)); 3009566063dSJacob Faibussowitsch PetscCall(VecDestroy(&coor_natural)); 3011e07b27eSBarry Smith PetscFunctionReturn(0); 3021e07b27eSBarry Smith } 3031e07b27eSBarry Smith 3049371c9d4SSatish Balay static PetscErrorCode PCTelescopeSetUp_dmda_repart_coors(PC pc, PC_Telescope sred, PC_Telescope_DMDACtx *ctx) { 3051e07b27eSBarry Smith PetscInt dim; 3061e07b27eSBarry Smith DM dm, subdm; 3071e07b27eSBarry Smith PetscSubcomm psubcomm; 3081e07b27eSBarry Smith MPI_Comm comm; 3091e07b27eSBarry Smith Vec coor; 3101e07b27eSBarry Smith 3111e07b27eSBarry Smith PetscFunctionBegin; 3129566063dSJacob Faibussowitsch PetscCall(PCGetDM(pc, &dm)); 3139566063dSJacob Faibussowitsch PetscCall(DMGetCoordinates(dm, &coor)); 3141e07b27eSBarry Smith if (!coor) PetscFunctionReturn(0); 3151e07b27eSBarry Smith psubcomm = sred->psubcomm; 3161e07b27eSBarry Smith comm = PetscSubcommParent(psubcomm); 3171e07b27eSBarry Smith subdm = ctx->dmrepart; 3181e07b27eSBarry Smith 3199566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: setting up the coordinates (DMDA)\n")); 3209566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, &dim, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL)); 3211e07b27eSBarry Smith switch (dim) { 3229371c9d4SSatish Balay case 1: SETERRQ(comm, PETSC_ERR_SUP, "Telescope: DMDA (1D) repartitioning not provided"); 3239371c9d4SSatish Balay case 2: PetscCall(PCTelescopeSetUp_dmda_repart_coors2d(sred, dm, subdm)); break; 3249371c9d4SSatish Balay case 3: PetscCall(PCTelescopeSetUp_dmda_repart_coors3d(sred, dm, subdm)); break; 3251e07b27eSBarry Smith } 3261e07b27eSBarry Smith PetscFunctionReturn(0); 3271e07b27eSBarry Smith } 3281e07b27eSBarry Smith 3291e07b27eSBarry Smith /* setup repartitioned dm */ 3309371c9d4SSatish Balay PetscErrorCode PCTelescopeSetUp_dmda_repart(PC pc, PC_Telescope sred, PC_Telescope_DMDACtx *ctx) { 3311e07b27eSBarry Smith DM dm; 3321e07b27eSBarry Smith PetscInt dim, nx, ny, nz, ndof, nsw, sum, k; 3331e07b27eSBarry Smith DMBoundaryType bx, by, bz; 3341e07b27eSBarry Smith DMDAStencilType stencil; 3351e07b27eSBarry Smith const PetscInt *_range_i_re; 3361e07b27eSBarry Smith const PetscInt *_range_j_re; 3371e07b27eSBarry Smith const PetscInt *_range_k_re; 3381e07b27eSBarry Smith DMDAInterpolationType itype; 3391e07b27eSBarry Smith PetscInt refine_x, refine_y, refine_z; 3401e07b27eSBarry Smith MPI_Comm comm, subcomm; 3411e07b27eSBarry Smith const char *prefix; 3421e07b27eSBarry Smith 3431e07b27eSBarry Smith PetscFunctionBegin; 3441e07b27eSBarry Smith comm = PetscSubcommParent(sred->psubcomm); 3451e07b27eSBarry Smith subcomm = PetscSubcommChild(sred->psubcomm); 3469566063dSJacob Faibussowitsch PetscCall(PCGetDM(pc, &dm)); 3471e07b27eSBarry Smith 3489566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, &dim, &nx, &ny, &nz, NULL, NULL, NULL, &ndof, &nsw, &bx, &by, &bz, &stencil)); 3499566063dSJacob Faibussowitsch PetscCall(DMDAGetInterpolationType(dm, &itype)); 3509566063dSJacob Faibussowitsch PetscCall(DMDAGetRefinementFactor(dm, &refine_x, &refine_y, &refine_z)); 3511e07b27eSBarry Smith 3521e07b27eSBarry Smith ctx->dmrepart = NULL; 3531e07b27eSBarry Smith _range_i_re = _range_j_re = _range_k_re = NULL; 3541e07b27eSBarry Smith /* Create DMDA on the child communicator */ 35557f12427SDave May if (PCTelescope_isActiveRank(sred)) { 3561e07b27eSBarry Smith switch (dim) { 3571e07b27eSBarry Smith case 1: 3589566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: setting up the DMDA on comm subset (1D)\n")); 3599566063dSJacob Faibussowitsch /* PetscCall(DMDACreate1d(subcomm,bx,nx,ndof,nsw,NULL,&ctx->dmrepart)); */ 3601e07b27eSBarry Smith ny = nz = 1; 3611e07b27eSBarry Smith by = bz = DM_BOUNDARY_NONE; 3621e07b27eSBarry Smith break; 3631e07b27eSBarry Smith case 2: 3649566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: setting up the DMDA on comm subset (2D)\n")); 3659566063dSJacob Faibussowitsch /* PetscCall(DMDACreate2d(subcomm,bx,by,stencil,nx,ny, PETSC_DECIDE,PETSC_DECIDE, 3669566063dSJacob Faibussowitsch ndof,nsw, NULL,NULL,&ctx->dmrepart)); */ 3671e07b27eSBarry Smith nz = 1; 3681e07b27eSBarry Smith bz = DM_BOUNDARY_NONE; 3691e07b27eSBarry Smith break; 3701e07b27eSBarry Smith case 3: 3719566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: setting up the DMDA on comm subset (3D)\n")); 3729566063dSJacob Faibussowitsch /* PetscCall(DMDACreate3d(subcomm,bx,by,bz,stencil,nx,ny,nz, 3739566063dSJacob Faibussowitsch PETSC_DECIDE,PETSC_DECIDE,PETSC_DECIDE, ndof,nsw, NULL,NULL,NULL,&ctx->dmrepart)); */ 3741e07b27eSBarry Smith break; 3751e07b27eSBarry Smith } 3761e07b27eSBarry Smith /* 3771e07b27eSBarry Smith The API DMDACreate1d(), DMDACreate2d(), DMDACreate3d() does not allow us to set/append 3781e07b27eSBarry Smith a unique option prefix for the DM, thus I prefer to expose the contents of these API's here. 3791e07b27eSBarry Smith This allows users to control the partitioning of the subDM. 3801e07b27eSBarry Smith */ 3819566063dSJacob Faibussowitsch PetscCall(DMDACreate(subcomm, &ctx->dmrepart)); 3821e07b27eSBarry Smith /* Set unique option prefix name */ 3839566063dSJacob Faibussowitsch PetscCall(KSPGetOptionsPrefix(sred->ksp, &prefix)); 3849566063dSJacob Faibussowitsch PetscCall(DMSetOptionsPrefix(ctx->dmrepart, prefix)); 3859566063dSJacob Faibussowitsch PetscCall(DMAppendOptionsPrefix(ctx->dmrepart, "repart_")); 3861e07b27eSBarry Smith /* standard setup from DMDACreate{1,2,3}d() */ 3879566063dSJacob Faibussowitsch PetscCall(DMSetDimension(ctx->dmrepart, dim)); 3889566063dSJacob Faibussowitsch PetscCall(DMDASetSizes(ctx->dmrepart, nx, ny, nz)); 3899566063dSJacob Faibussowitsch PetscCall(DMDASetNumProcs(ctx->dmrepart, PETSC_DECIDE, PETSC_DECIDE, PETSC_DECIDE)); 3909566063dSJacob Faibussowitsch PetscCall(DMDASetBoundaryType(ctx->dmrepart, bx, by, bz)); 3919566063dSJacob Faibussowitsch PetscCall(DMDASetDof(ctx->dmrepart, ndof)); 3929566063dSJacob Faibussowitsch PetscCall(DMDASetStencilType(ctx->dmrepart, stencil)); 3939566063dSJacob Faibussowitsch PetscCall(DMDASetStencilWidth(ctx->dmrepart, nsw)); 3949566063dSJacob Faibussowitsch PetscCall(DMDASetOwnershipRanges(ctx->dmrepart, NULL, NULL, NULL)); 3959566063dSJacob Faibussowitsch PetscCall(DMSetFromOptions(ctx->dmrepart)); 3969566063dSJacob Faibussowitsch PetscCall(DMSetUp(ctx->dmrepart)); 3971e07b27eSBarry Smith /* Set refinement factors and interpolation type from the partent */ 3989566063dSJacob Faibussowitsch PetscCall(DMDASetRefinementFactor(ctx->dmrepart, refine_x, refine_y, refine_z)); 3999566063dSJacob Faibussowitsch PetscCall(DMDASetInterpolationType(ctx->dmrepart, itype)); 4001e07b27eSBarry Smith 4019566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(ctx->dmrepart, NULL, NULL, NULL, NULL, &ctx->Mp_re, &ctx->Np_re, &ctx->Pp_re, NULL, NULL, NULL, NULL, NULL, NULL)); 4029566063dSJacob Faibussowitsch PetscCall(DMDAGetOwnershipRanges(ctx->dmrepart, &_range_i_re, &_range_j_re, &_range_k_re)); 4035e897e82SDave May 4045e897e82SDave May ctx->dmrepart->ops->creatematrix = dm->ops->creatematrix; 4055e897e82SDave May ctx->dmrepart->ops->createdomaindecomposition = dm->ops->createdomaindecomposition; 4061e07b27eSBarry Smith } 4071e07b27eSBarry Smith 4081e07b27eSBarry Smith /* generate ranges for repartitioned dm */ 4091e07b27eSBarry Smith /* note - assume rank 0 always participates */ 410071fcb05SBarry Smith /* TODO: use a single MPI call */ 4119566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(&ctx->Mp_re, 1, MPIU_INT, 0, comm)); 4129566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(&ctx->Np_re, 1, MPIU_INT, 0, comm)); 4139566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(&ctx->Pp_re, 1, MPIU_INT, 0, comm)); 4141e07b27eSBarry Smith 4159566063dSJacob Faibussowitsch PetscCall(PetscCalloc3(ctx->Mp_re, &ctx->range_i_re, ctx->Np_re, &ctx->range_j_re, ctx->Pp_re, &ctx->range_k_re)); 4161e07b27eSBarry Smith 4179566063dSJacob Faibussowitsch if (_range_i_re) PetscCall(PetscArraycpy(ctx->range_i_re, _range_i_re, ctx->Mp_re)); 4189566063dSJacob Faibussowitsch if (_range_j_re) PetscCall(PetscArraycpy(ctx->range_j_re, _range_j_re, ctx->Np_re)); 4199566063dSJacob Faibussowitsch if (_range_k_re) PetscCall(PetscArraycpy(ctx->range_k_re, _range_k_re, ctx->Pp_re)); 4201e07b27eSBarry Smith 421071fcb05SBarry Smith /* TODO: use a single MPI call */ 4229566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(ctx->range_i_re, ctx->Mp_re, MPIU_INT, 0, comm)); 4239566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(ctx->range_j_re, ctx->Np_re, MPIU_INT, 0, comm)); 4249566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(ctx->range_k_re, ctx->Pp_re, MPIU_INT, 0, comm)); 4251e07b27eSBarry Smith 4269566063dSJacob Faibussowitsch PetscCall(PetscMalloc3(ctx->Mp_re, &ctx->start_i_re, ctx->Np_re, &ctx->start_j_re, ctx->Pp_re, &ctx->start_k_re)); 4271e07b27eSBarry Smith 4281e07b27eSBarry Smith sum = 0; 4291e07b27eSBarry Smith for (k = 0; k < ctx->Mp_re; k++) { 4301e07b27eSBarry Smith ctx->start_i_re[k] = sum; 4311e07b27eSBarry Smith sum += ctx->range_i_re[k]; 4321e07b27eSBarry Smith } 4331e07b27eSBarry Smith 4341e07b27eSBarry Smith sum = 0; 4351e07b27eSBarry Smith for (k = 0; k < ctx->Np_re; k++) { 4361e07b27eSBarry Smith ctx->start_j_re[k] = sum; 4371e07b27eSBarry Smith sum += ctx->range_j_re[k]; 4381e07b27eSBarry Smith } 4391e07b27eSBarry Smith 4401e07b27eSBarry Smith sum = 0; 4411e07b27eSBarry Smith for (k = 0; k < ctx->Pp_re; k++) { 4421e07b27eSBarry Smith ctx->start_k_re[k] = sum; 4431e07b27eSBarry Smith sum += ctx->range_k_re[k]; 4441e07b27eSBarry Smith } 4451e07b27eSBarry Smith 446ba1c3560SDave May /* attach repartitioned dm to child ksp */ 447ba1c3560SDave May { 448ba1c3560SDave May PetscErrorCode (*dmksp_func)(KSP, Mat, Mat, void *); 449ba1c3560SDave May void *dmksp_ctx; 450ba1c3560SDave May 4519566063dSJacob Faibussowitsch PetscCall(DMKSPGetComputeOperators(dm, &dmksp_func, &dmksp_ctx)); 452ba1c3560SDave May 4531e07b27eSBarry Smith /* attach dm to ksp on sub communicator */ 45457f12427SDave May if (PCTelescope_isActiveRank(sred)) { 4559566063dSJacob Faibussowitsch PetscCall(KSPSetDM(sred->ksp, ctx->dmrepart)); 456ba1c3560SDave May 457c5db1f53SDave May if (!dmksp_func || sred->ignore_kspcomputeoperators) { 4589566063dSJacob Faibussowitsch PetscCall(KSPSetDMActive(sred->ksp, PETSC_FALSE)); 459ba1c3560SDave May } else { 460ba1c3560SDave May /* sub ksp inherits dmksp_func and context provided by user */ 4619566063dSJacob Faibussowitsch PetscCall(KSPSetComputeOperators(sred->ksp, dmksp_func, dmksp_ctx)); 4629566063dSJacob Faibussowitsch PetscCall(KSPSetDMActive(sred->ksp, PETSC_TRUE)); 463ba1c3560SDave May } 464ba1c3560SDave May } 4651e07b27eSBarry Smith } 4661e07b27eSBarry Smith PetscFunctionReturn(0); 4671e07b27eSBarry Smith } 4681e07b27eSBarry Smith 4699371c9d4SSatish Balay PetscErrorCode PCTelescopeSetUp_dmda_permutation_3d(PC pc, PC_Telescope sred, PC_Telescope_DMDACtx *ctx) { 4701e07b27eSBarry Smith DM dm; 4711e07b27eSBarry Smith MPI_Comm comm; 4721e07b27eSBarry Smith Mat Pscalar, P; 4731e07b27eSBarry Smith PetscInt ndof; 4741e07b27eSBarry Smith PetscInt i, j, k, location, startI[3], endI[3], lenI[3], nx, ny, nz; 4751e07b27eSBarry Smith PetscInt sr, er, Mr; 4761e07b27eSBarry Smith Vec V; 4771e07b27eSBarry Smith 4781e07b27eSBarry Smith PetscFunctionBegin; 4799566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: setting up the permutation matrix (DMDA-3D)\n")); 4809566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)pc, &comm)); 4811e07b27eSBarry Smith 4829566063dSJacob Faibussowitsch PetscCall(PCGetDM(pc, &dm)); 4839566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, NULL, &nx, &ny, &nz, NULL, NULL, NULL, &ndof, NULL, NULL, NULL, NULL, NULL)); 4841e07b27eSBarry Smith 4859566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(dm, &V)); 4869566063dSJacob Faibussowitsch PetscCall(VecGetSize(V, &Mr)); 4879566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(V, &sr, &er)); 4889566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(dm, &V)); 4891e07b27eSBarry Smith sr = sr / ndof; 4901e07b27eSBarry Smith er = er / ndof; 4911e07b27eSBarry Smith Mr = Mr / ndof; 4921e07b27eSBarry Smith 4939566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &Pscalar)); 4949566063dSJacob Faibussowitsch PetscCall(MatSetSizes(Pscalar, (er - sr), (er - sr), Mr, Mr)); 4959566063dSJacob Faibussowitsch PetscCall(MatSetType(Pscalar, MATAIJ)); 4969566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation(Pscalar, 1, NULL)); 4979566063dSJacob Faibussowitsch PetscCall(MatMPIAIJSetPreallocation(Pscalar, 1, NULL, 1, NULL)); 4981e07b27eSBarry Smith 4999566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(dm, NULL, NULL, NULL, &lenI[0], &lenI[1], &lenI[2])); 5009566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(dm, &startI[0], &startI[1], &startI[2], &endI[0], &endI[1], &endI[2])); 5011e07b27eSBarry Smith endI[0] += startI[0]; 5021e07b27eSBarry Smith endI[1] += startI[1]; 5031e07b27eSBarry Smith endI[2] += startI[2]; 5041e07b27eSBarry Smith 5051e07b27eSBarry Smith for (k = startI[2]; k < endI[2]; k++) { 5061e07b27eSBarry Smith for (j = startI[1]; j < endI[1]; j++) { 5071e07b27eSBarry Smith for (i = startI[0]; i < endI[0]; i++) { 5081e07b27eSBarry Smith PetscMPIInt rank_ijk_re, rank_reI[3]; 5091e07b27eSBarry Smith PetscInt s0_re; 510c6a0d831SBarry Smith PetscInt ii, jj, kk, local_ijk_re, mapped_ijk; 5111e07b27eSBarry Smith PetscInt lenI_re[3]; 5121e07b27eSBarry Smith 5131e07b27eSBarry Smith location = (i - startI[0]) + (j - startI[1]) * lenI[0] + (k - startI[2]) * lenI[0] * lenI[1]; 5149371c9d4SSatish Balay PetscCall(_DMDADetermineRankFromGlobalIJK(3, i, j, k, ctx->Mp_re, ctx->Np_re, ctx->Pp_re, ctx->start_i_re, ctx->start_j_re, ctx->start_k_re, ctx->range_i_re, ctx->range_j_re, ctx->range_k_re, &rank_reI[0], &rank_reI[1], &rank_reI[2], &rank_ijk_re)); 5159566063dSJacob Faibussowitsch PetscCall(_DMDADetermineGlobalS0(3, rank_ijk_re, ctx->Mp_re, ctx->Np_re, ctx->Pp_re, ctx->range_i_re, ctx->range_j_re, ctx->range_k_re, &s0_re)); 5161e07b27eSBarry Smith ii = i - ctx->start_i_re[rank_reI[0]]; 51708401ef6SPierre Jolivet PetscCheck(ii >= 0, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmdarepart-perm3d] index error ii"); 5181e07b27eSBarry Smith jj = j - ctx->start_j_re[rank_reI[1]]; 51908401ef6SPierre Jolivet PetscCheck(jj >= 0, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmdarepart-perm3d] index error jj"); 5201e07b27eSBarry Smith kk = k - ctx->start_k_re[rank_reI[2]]; 52108401ef6SPierre Jolivet PetscCheck(kk >= 0, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmdarepart-perm3d] index error kk"); 5221e07b27eSBarry Smith lenI_re[0] = ctx->range_i_re[rank_reI[0]]; 5231e07b27eSBarry Smith lenI_re[1] = ctx->range_j_re[rank_reI[1]]; 5241e07b27eSBarry Smith lenI_re[2] = ctx->range_k_re[rank_reI[2]]; 5251e07b27eSBarry Smith local_ijk_re = ii + jj * lenI_re[0] + kk * lenI_re[0] * lenI_re[1]; 5261e07b27eSBarry Smith mapped_ijk = s0_re + local_ijk_re; 5279566063dSJacob Faibussowitsch PetscCall(MatSetValue(Pscalar, sr + location, mapped_ijk, 1.0, INSERT_VALUES)); 5281e07b27eSBarry Smith } 5291e07b27eSBarry Smith } 5301e07b27eSBarry Smith } 5319566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(Pscalar, MAT_FINAL_ASSEMBLY)); 5329566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(Pscalar, MAT_FINAL_ASSEMBLY)); 5339566063dSJacob Faibussowitsch PetscCall(MatCreateMAIJ(Pscalar, ndof, &P)); 5349566063dSJacob Faibussowitsch PetscCall(MatDestroy(&Pscalar)); 5351e07b27eSBarry Smith ctx->permutation = P; 5361e07b27eSBarry Smith PetscFunctionReturn(0); 5371e07b27eSBarry Smith } 5381e07b27eSBarry Smith 5399371c9d4SSatish Balay PetscErrorCode PCTelescopeSetUp_dmda_permutation_2d(PC pc, PC_Telescope sred, PC_Telescope_DMDACtx *ctx) { 5401e07b27eSBarry Smith DM dm; 5411e07b27eSBarry Smith MPI_Comm comm; 5421e07b27eSBarry Smith Mat Pscalar, P; 5431e07b27eSBarry Smith PetscInt ndof; 5441e07b27eSBarry Smith PetscInt i, j, location, startI[2], endI[2], lenI[2], nx, ny, nz; 5451e07b27eSBarry Smith PetscInt sr, er, Mr; 5461e07b27eSBarry Smith Vec V; 5471e07b27eSBarry Smith 5481e07b27eSBarry Smith PetscFunctionBegin; 5499566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: setting up the permutation matrix (DMDA-2D)\n")); 5509566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)pc, &comm)); 5519566063dSJacob Faibussowitsch PetscCall(PCGetDM(pc, &dm)); 5529566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, NULL, &nx, &ny, &nz, NULL, NULL, NULL, &ndof, NULL, NULL, NULL, NULL, NULL)); 5539566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(dm, &V)); 5549566063dSJacob Faibussowitsch PetscCall(VecGetSize(V, &Mr)); 5559566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(V, &sr, &er)); 5569566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(dm, &V)); 5571e07b27eSBarry Smith sr = sr / ndof; 5581e07b27eSBarry Smith er = er / ndof; 5591e07b27eSBarry Smith Mr = Mr / ndof; 5601e07b27eSBarry Smith 5619566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &Pscalar)); 5629566063dSJacob Faibussowitsch PetscCall(MatSetSizes(Pscalar, (er - sr), (er - sr), Mr, Mr)); 5639566063dSJacob Faibussowitsch PetscCall(MatSetType(Pscalar, MATAIJ)); 5649566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation(Pscalar, 1, NULL)); 5659566063dSJacob Faibussowitsch PetscCall(MatMPIAIJSetPreallocation(Pscalar, 1, NULL, 1, NULL)); 5661e07b27eSBarry Smith 5679566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(dm, NULL, NULL, NULL, &lenI[0], &lenI[1], NULL)); 5689566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(dm, &startI[0], &startI[1], NULL, &endI[0], &endI[1], NULL)); 5691e07b27eSBarry Smith endI[0] += startI[0]; 5701e07b27eSBarry Smith endI[1] += startI[1]; 5711e07b27eSBarry Smith 5721e07b27eSBarry Smith for (j = startI[1]; j < endI[1]; j++) { 5731e07b27eSBarry Smith for (i = startI[0]; i < endI[0]; i++) { 5741e07b27eSBarry Smith PetscMPIInt rank_ijk_re, rank_reI[3]; 5751e07b27eSBarry Smith PetscInt s0_re; 576c6a0d831SBarry Smith PetscInt ii, jj, local_ijk_re, mapped_ijk; 5771e07b27eSBarry Smith PetscInt lenI_re[3]; 5781e07b27eSBarry Smith 5791e07b27eSBarry Smith location = (i - startI[0]) + (j - startI[1]) * lenI[0]; 5809371c9d4SSatish Balay PetscCall(_DMDADetermineRankFromGlobalIJK(2, i, j, 0, ctx->Mp_re, ctx->Np_re, ctx->Pp_re, ctx->start_i_re, ctx->start_j_re, ctx->start_k_re, ctx->range_i_re, ctx->range_j_re, ctx->range_k_re, &rank_reI[0], &rank_reI[1], NULL, &rank_ijk_re)); 5811e07b27eSBarry Smith 5829566063dSJacob Faibussowitsch PetscCall(_DMDADetermineGlobalS0(2, rank_ijk_re, ctx->Mp_re, ctx->Np_re, ctx->Pp_re, ctx->range_i_re, ctx->range_j_re, ctx->range_k_re, &s0_re)); 5831e07b27eSBarry Smith 5841e07b27eSBarry Smith ii = i - ctx->start_i_re[rank_reI[0]]; 58508401ef6SPierre Jolivet PetscCheck(ii >= 0, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmdarepart-perm2d] index error ii"); 5861e07b27eSBarry Smith jj = j - ctx->start_j_re[rank_reI[1]]; 58708401ef6SPierre Jolivet PetscCheck(jj >= 0, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmdarepart-perm2d] index error jj"); 5881e07b27eSBarry Smith 5891e07b27eSBarry Smith lenI_re[0] = ctx->range_i_re[rank_reI[0]]; 5901e07b27eSBarry Smith lenI_re[1] = ctx->range_j_re[rank_reI[1]]; 5911e07b27eSBarry Smith local_ijk_re = ii + jj * lenI_re[0]; 5921e07b27eSBarry Smith mapped_ijk = s0_re + local_ijk_re; 5939566063dSJacob Faibussowitsch PetscCall(MatSetValue(Pscalar, sr + location, mapped_ijk, 1.0, INSERT_VALUES)); 5941e07b27eSBarry Smith } 5951e07b27eSBarry Smith } 5969566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(Pscalar, MAT_FINAL_ASSEMBLY)); 5979566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(Pscalar, MAT_FINAL_ASSEMBLY)); 5989566063dSJacob Faibussowitsch PetscCall(MatCreateMAIJ(Pscalar, ndof, &P)); 5999566063dSJacob Faibussowitsch PetscCall(MatDestroy(&Pscalar)); 6001e07b27eSBarry Smith ctx->permutation = P; 6011e07b27eSBarry Smith PetscFunctionReturn(0); 6021e07b27eSBarry Smith } 6031e07b27eSBarry Smith 6049371c9d4SSatish Balay PetscErrorCode PCTelescopeSetUp_dmda_scatters(PC pc, PC_Telescope sred, PC_Telescope_DMDACtx *ctx) { 6051e07b27eSBarry Smith Vec xred, yred, xtmp, x, xp; 6061e07b27eSBarry Smith VecScatter scatter; 6071e07b27eSBarry Smith IS isin; 6081e07b27eSBarry Smith Mat B; 6091e07b27eSBarry Smith PetscInt m, bs, st, ed; 6101e07b27eSBarry Smith MPI_Comm comm; 6111e07b27eSBarry Smith 6121e07b27eSBarry Smith PetscFunctionBegin; 6139566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)pc, &comm)); 6149566063dSJacob Faibussowitsch PetscCall(PCGetOperators(pc, NULL, &B)); 6159566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(B, &x, NULL)); 6169566063dSJacob Faibussowitsch PetscCall(MatGetBlockSize(B, &bs)); 6179566063dSJacob Faibussowitsch PetscCall(VecDuplicate(x, &xp)); 6183ac26c5eSBarry Smith m = 0; 6191e07b27eSBarry Smith xred = NULL; 6201e07b27eSBarry Smith yred = NULL; 62157f12427SDave May if (PCTelescope_isActiveRank(sred)) { 6229566063dSJacob Faibussowitsch PetscCall(DMCreateGlobalVector(ctx->dmrepart, &xred)); 6239566063dSJacob Faibussowitsch PetscCall(VecDuplicate(xred, &yred)); 6249566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(xred, &st, &ed)); 6259566063dSJacob Faibussowitsch PetscCall(ISCreateStride(comm, ed - st, st, 1, &isin)); 6269566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(xred, &m)); 6271e07b27eSBarry Smith } else { 6289566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(x, &st, &ed)); 6299566063dSJacob Faibussowitsch PetscCall(ISCreateStride(comm, 0, st, 1, &isin)); 6301e07b27eSBarry Smith } 6319566063dSJacob Faibussowitsch PetscCall(ISSetBlockSize(isin, bs)); 6329566063dSJacob Faibussowitsch PetscCall(VecCreate(comm, &xtmp)); 6339566063dSJacob Faibussowitsch PetscCall(VecSetSizes(xtmp, m, PETSC_DECIDE)); 6349566063dSJacob Faibussowitsch PetscCall(VecSetBlockSize(xtmp, bs)); 6359566063dSJacob Faibussowitsch PetscCall(VecSetType(xtmp, ((PetscObject)x)->type_name)); 6369566063dSJacob Faibussowitsch PetscCall(VecScatterCreate(x, isin, xtmp, NULL, &scatter)); 6371e07b27eSBarry Smith sred->xred = xred; 6381e07b27eSBarry Smith sred->yred = yred; 6391e07b27eSBarry Smith sred->isin = isin; 6401e07b27eSBarry Smith sred->scatter = scatter; 6411e07b27eSBarry Smith sred->xtmp = xtmp; 6421e07b27eSBarry Smith 6431e07b27eSBarry Smith ctx->xp = xp; 6449566063dSJacob Faibussowitsch PetscCall(VecDestroy(&x)); 6451e07b27eSBarry Smith PetscFunctionReturn(0); 6461e07b27eSBarry Smith } 6471e07b27eSBarry Smith 6489371c9d4SSatish Balay PetscErrorCode PCTelescopeSetUp_dmda(PC pc, PC_Telescope sred) { 6491e07b27eSBarry Smith PC_Telescope_DMDACtx *ctx; 6501e07b27eSBarry Smith PetscInt dim; 6511e07b27eSBarry Smith DM dm; 6521e07b27eSBarry Smith MPI_Comm comm; 6531e07b27eSBarry Smith 6541e07b27eSBarry Smith PetscFunctionBegin; 6559566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: setup (DMDA)\n")); 6569566063dSJacob Faibussowitsch PetscCall(PetscNew(&ctx)); 6571e07b27eSBarry Smith sred->dm_ctx = (void *)ctx; 6581e07b27eSBarry Smith 6599566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)pc, &comm)); 6609566063dSJacob Faibussowitsch PetscCall(PCGetDM(pc, &dm)); 6619566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, &dim, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL)); 6621e07b27eSBarry Smith 6631e07b27eSBarry Smith PCTelescopeSetUp_dmda_repart(pc, sred, ctx); 6641e07b27eSBarry Smith PCTelescopeSetUp_dmda_repart_coors(pc, sred, ctx); 6651e07b27eSBarry Smith switch (dim) { 6669371c9d4SSatish Balay case 1: SETERRQ(comm, PETSC_ERR_SUP, "Telescope: DMDA (1D) repartitioning not provided"); 6679371c9d4SSatish Balay case 2: PetscCall(PCTelescopeSetUp_dmda_permutation_2d(pc, sred, ctx)); break; 6689371c9d4SSatish Balay case 3: PetscCall(PCTelescopeSetUp_dmda_permutation_3d(pc, sred, ctx)); break; 6691e07b27eSBarry Smith } 6709566063dSJacob Faibussowitsch PetscCall(PCTelescopeSetUp_dmda_scatters(pc, sred, ctx)); 6711e07b27eSBarry Smith PetscFunctionReturn(0); 6721e07b27eSBarry Smith } 6731e07b27eSBarry Smith 6749371c9d4SSatish Balay PetscErrorCode PCTelescopeMatCreate_dmda_dmactivefalse(PC pc, PC_Telescope sred, MatReuse reuse, Mat *A) { 6751e07b27eSBarry Smith PC_Telescope_DMDACtx *ctx; 6761e07b27eSBarry Smith MPI_Comm comm, subcomm; 6771e07b27eSBarry Smith Mat Bperm, Bred, B, P; 6781e07b27eSBarry Smith PetscInt nr, nc; 6791e07b27eSBarry Smith IS isrow, iscol; 6801e07b27eSBarry Smith Mat Blocal, *_Blocal; 6811e07b27eSBarry Smith 6821e07b27eSBarry Smith PetscFunctionBegin; 6839566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: updating the redundant preconditioned operator (DMDA)\n")); 6849566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)pc, &comm)); 6851e07b27eSBarry Smith subcomm = PetscSubcommChild(sred->psubcomm); 6861e07b27eSBarry Smith ctx = (PC_Telescope_DMDACtx *)sred->dm_ctx; 6871e07b27eSBarry Smith 6889566063dSJacob Faibussowitsch PetscCall(PCGetOperators(pc, NULL, &B)); 6899566063dSJacob Faibussowitsch PetscCall(MatGetSize(B, &nr, &nc)); 6901e07b27eSBarry Smith 6911e07b27eSBarry Smith P = ctx->permutation; 6929566063dSJacob Faibussowitsch PetscCall(MatPtAP(B, P, MAT_INITIAL_MATRIX, 1.1, &Bperm)); 6931e07b27eSBarry Smith 6941e07b27eSBarry Smith /* Get submatrices */ 6951e07b27eSBarry Smith isrow = sred->isin; 6969566063dSJacob Faibussowitsch PetscCall(ISCreateStride(comm, nc, 0, 1, &iscol)); 6971e07b27eSBarry Smith 6989566063dSJacob Faibussowitsch PetscCall(MatCreateSubMatrices(Bperm, 1, &isrow, &iscol, MAT_INITIAL_MATRIX, &_Blocal)); 6991e07b27eSBarry Smith Blocal = *_Blocal; 7001e07b27eSBarry Smith Bred = NULL; 70157f12427SDave May if (PCTelescope_isActiveRank(sred)) { 7021e07b27eSBarry Smith PetscInt mm; 7031e07b27eSBarry Smith 7041e07b27eSBarry Smith if (reuse != MAT_INITIAL_MATRIX) { Bred = *A; } 7059566063dSJacob Faibussowitsch PetscCall(MatGetSize(Blocal, &mm, NULL)); 7069566063dSJacob Faibussowitsch /* PetscCall(MatCreateMPIMatConcatenateSeqMat(subcomm,Blocal,PETSC_DECIDE,reuse,&Bred)); */ 7079566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(subcomm, Blocal, mm, reuse, &Bred)); 7081e07b27eSBarry Smith } 7091e07b27eSBarry Smith *A = Bred; 7101e07b27eSBarry Smith 7119566063dSJacob Faibussowitsch PetscCall(ISDestroy(&iscol)); 7129566063dSJacob Faibussowitsch PetscCall(MatDestroy(&Bperm)); 7139566063dSJacob Faibussowitsch PetscCall(MatDestroyMatrices(1, &_Blocal)); 7141e07b27eSBarry Smith PetscFunctionReturn(0); 7151e07b27eSBarry Smith } 7161e07b27eSBarry Smith 7179371c9d4SSatish Balay PetscErrorCode PCTelescopeMatCreate_dmda(PC pc, PC_Telescope sred, MatReuse reuse, Mat *A) { 718ba1c3560SDave May DM dm; 719ba1c3560SDave May PetscErrorCode (*dmksp_func)(KSP, Mat, Mat, void *); 720ba1c3560SDave May void *dmksp_ctx; 721ba1c3560SDave May 722ba1c3560SDave May PetscFunctionBegin; 7239566063dSJacob Faibussowitsch PetscCall(PCGetDM(pc, &dm)); 7249566063dSJacob Faibussowitsch PetscCall(DMKSPGetComputeOperators(dm, &dmksp_func, &dmksp_ctx)); 725dc9ee9fdSDave May /* We assume that dmksp_func = NULL, is equivalent to dmActive = PETSC_FALSE */ 7267c5279cbSDave May if (dmksp_func && !sred->ignore_kspcomputeoperators) { 727ba1c3560SDave May DM dmrepart; 72828323a89SDave May Mat Ak; 729ba1c3560SDave May 730ba1c3560SDave May *A = NULL; 73157f12427SDave May if (PCTelescope_isActiveRank(sred)) { 7329566063dSJacob Faibussowitsch PetscCall(KSPGetDM(sred->ksp, &dmrepart)); 733ba1c3560SDave May if (reuse == MAT_INITIAL_MATRIX) { 7349566063dSJacob Faibussowitsch PetscCall(DMCreateMatrix(dmrepart, &Ak)); 735ba1c3560SDave May *A = Ak; 736ba1c3560SDave May } else if (reuse == MAT_REUSE_MATRIX) { 737ba1c3560SDave May Ak = *A; 738ba1c3560SDave May } 7395c5dbb1cSDave May /* 7405c5dbb1cSDave May There is no need to explicitly assemble the operator now, 7415c5dbb1cSDave May the sub-KSP will call the method provided to KSPSetComputeOperators() during KSPSetUp() 7425c5dbb1cSDave May */ 743ba1c3560SDave May } 744ba1c3560SDave May } else { 7459566063dSJacob Faibussowitsch PetscCall(PCTelescopeMatCreate_dmda_dmactivefalse(pc, sred, reuse, A)); 746ba1c3560SDave May } 747ba1c3560SDave May PetscFunctionReturn(0); 748ba1c3560SDave May } 749ba1c3560SDave May 7509371c9d4SSatish Balay PetscErrorCode PCTelescopeSubNullSpaceCreate_dmda_Telescope(PC pc, PC_Telescope sred, MatNullSpace nullspace, MatNullSpace *sub_nullspace) { 7511e07b27eSBarry Smith PetscBool has_const; 752a947c41eSDave May PetscInt i, k, n = 0; 7531e07b27eSBarry Smith const Vec *vecs; 754c41e779fSDave May Vec *sub_vecs = NULL; 7551e07b27eSBarry Smith MPI_Comm subcomm; 7561e07b27eSBarry Smith PC_Telescope_DMDACtx *ctx; 7571e07b27eSBarry Smith 7581e07b27eSBarry Smith PetscFunctionBegin; 7591e07b27eSBarry Smith ctx = (PC_Telescope_DMDACtx *)sred->dm_ctx; 7601e07b27eSBarry Smith subcomm = PetscSubcommChild(sred->psubcomm); 7619566063dSJacob Faibussowitsch PetscCall(MatNullSpaceGetVecs(nullspace, &has_const, &n, &vecs)); 7621e07b27eSBarry Smith 76357f12427SDave May if (PCTelescope_isActiveRank(sred)) { 7641e07b27eSBarry Smith /* create new vectors */ 765*48a46eb9SPierre Jolivet if (n) PetscCall(VecDuplicateVecs(sred->xred, n, &sub_vecs)); 7661e07b27eSBarry Smith } 7671e07b27eSBarry Smith 7681e07b27eSBarry Smith /* copy entries */ 7691e07b27eSBarry Smith for (k = 0; k < n; k++) { 7701e07b27eSBarry Smith const PetscScalar *x_array; 7711e07b27eSBarry Smith PetscScalar *LA_sub_vec; 77213c30530SDave May PetscInt st, ed; 7731e07b27eSBarry Smith 7741e07b27eSBarry Smith /* permute vector into ordering associated with re-partitioned dmda */ 7759566063dSJacob Faibussowitsch PetscCall(MatMultTranspose(ctx->permutation, vecs[k], ctx->xp)); 7761e07b27eSBarry Smith 7771e07b27eSBarry Smith /* pull in vector x->xtmp */ 7789566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(sred->scatter, ctx->xp, sred->xtmp, INSERT_VALUES, SCATTER_FORWARD)); 7799566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(sred->scatter, ctx->xp, sred->xtmp, INSERT_VALUES, SCATTER_FORWARD)); 7801e07b27eSBarry Smith 781392968a1SPatrick Sanan /* copy vector entries into xred */ 7829566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(sred->xtmp, &x_array)); 783ea2b237eSDave May if (sub_vecs) { 784ea2b237eSDave May if (sub_vecs[k]) { 7859566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(sub_vecs[k], &st, &ed)); 7869566063dSJacob Faibussowitsch PetscCall(VecGetArray(sub_vecs[k], &LA_sub_vec)); 7879371c9d4SSatish Balay for (i = 0; i < ed - st; i++) { LA_sub_vec[i] = x_array[i]; } 7889566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(sub_vecs[k], &LA_sub_vec)); 7891e07b27eSBarry Smith } 790ea2b237eSDave May } 7919566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(sred->xtmp, &x_array)); 7921e07b27eSBarry Smith } 7931e07b27eSBarry Smith 79457f12427SDave May if (PCTelescope_isActiveRank(sred)) { 795d8b9d5b7SPatrick Sanan /* create new (near) nullspace for redundant object */ 7969566063dSJacob Faibussowitsch PetscCall(MatNullSpaceCreate(subcomm, has_const, n, sub_vecs, sub_nullspace)); 7979566063dSJacob Faibussowitsch PetscCall(VecDestroyVecs(n, &sub_vecs)); 79828b400f6SJacob Faibussowitsch PetscCheck(!nullspace->remove, PetscObjectComm((PetscObject)pc), PETSC_ERR_SUP, "Propagation of custom remove callbacks not supported when propagating (near) nullspaces with PCTelescope"); 79928b400f6SJacob Faibussowitsch PetscCheck(!nullspace->rmctx, PetscObjectComm((PetscObject)pc), PETSC_ERR_SUP, "Propagation of custom remove callback context not supported when propagating (near) nullspaces with PCTelescope"); 800d8b9d5b7SPatrick Sanan } 801392968a1SPatrick Sanan PetscFunctionReturn(0); 802392968a1SPatrick Sanan } 803392968a1SPatrick Sanan 8049371c9d4SSatish Balay PetscErrorCode PCTelescopeMatNullSpaceCreate_dmda(PC pc, PC_Telescope sred, Mat sub_mat) { 805392968a1SPatrick Sanan Mat B; 806392968a1SPatrick Sanan 807392968a1SPatrick Sanan PetscFunctionBegin; 8089566063dSJacob Faibussowitsch PetscCall(PCGetOperators(pc, NULL, &B)); 809392968a1SPatrick Sanan { 810392968a1SPatrick Sanan MatNullSpace nullspace, sub_nullspace; 8119566063dSJacob Faibussowitsch PetscCall(MatGetNullSpace(B, &nullspace)); 812392968a1SPatrick Sanan if (nullspace) { 8139566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: generating nullspace (DMDA)\n")); 8149566063dSJacob Faibussowitsch PetscCall(PCTelescopeSubNullSpaceCreate_dmda_Telescope(pc, sred, nullspace, &sub_nullspace)); 81557f12427SDave May if (PCTelescope_isActiveRank(sred)) { 8169566063dSJacob Faibussowitsch PetscCall(MatSetNullSpace(sub_mat, sub_nullspace)); 8179566063dSJacob Faibussowitsch PetscCall(MatNullSpaceDestroy(&sub_nullspace)); 8181e07b27eSBarry Smith } 819392968a1SPatrick Sanan } 820392968a1SPatrick Sanan } 821392968a1SPatrick Sanan { 822392968a1SPatrick Sanan MatNullSpace nearnullspace, sub_nearnullspace; 8239566063dSJacob Faibussowitsch PetscCall(MatGetNearNullSpace(B, &nearnullspace)); 824392968a1SPatrick Sanan if (nearnullspace) { 8259566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: generating near nullspace (DMDA)\n")); 8269566063dSJacob Faibussowitsch PetscCall(PCTelescopeSubNullSpaceCreate_dmda_Telescope(pc, sred, nearnullspace, &sub_nearnullspace)); 82757f12427SDave May if (PCTelescope_isActiveRank(sred)) { 8289566063dSJacob Faibussowitsch PetscCall(MatSetNearNullSpace(sub_mat, sub_nearnullspace)); 8299566063dSJacob Faibussowitsch PetscCall(MatNullSpaceDestroy(&sub_nearnullspace)); 830392968a1SPatrick Sanan } 831392968a1SPatrick Sanan } 832392968a1SPatrick Sanan } 8331e07b27eSBarry Smith PetscFunctionReturn(0); 8341e07b27eSBarry Smith } 8351e07b27eSBarry Smith 8369371c9d4SSatish Balay PetscErrorCode PCApply_Telescope_dmda(PC pc, Vec x, Vec y) { 8371e07b27eSBarry Smith PC_Telescope sred = (PC_Telescope)pc->data; 8381e07b27eSBarry Smith Mat perm; 8391e07b27eSBarry Smith Vec xtmp, xp, xred, yred; 84013c30530SDave May PetscInt i, st, ed; 8411e07b27eSBarry Smith VecScatter scatter; 8421e07b27eSBarry Smith PetscScalar *array; 8431e07b27eSBarry Smith const PetscScalar *x_array; 8441e07b27eSBarry Smith PC_Telescope_DMDACtx *ctx; 8451e07b27eSBarry Smith 8461e07b27eSBarry Smith ctx = (PC_Telescope_DMDACtx *)sred->dm_ctx; 8471e07b27eSBarry Smith xtmp = sred->xtmp; 8481e07b27eSBarry Smith scatter = sred->scatter; 8491e07b27eSBarry Smith xred = sred->xred; 8501e07b27eSBarry Smith yred = sred->yred; 8511e07b27eSBarry Smith perm = ctx->permutation; 8521e07b27eSBarry Smith xp = ctx->xp; 8531e07b27eSBarry Smith 8541e07b27eSBarry Smith PetscFunctionBegin; 8559566063dSJacob Faibussowitsch PetscCall(PetscCitationsRegister(citation, &cited)); 85614c9fce5SDave May 8571e07b27eSBarry Smith /* permute vector into ordering associated with re-partitioned dmda */ 8589566063dSJacob Faibussowitsch PetscCall(MatMultTranspose(perm, x, xp)); 8591e07b27eSBarry Smith 8601e07b27eSBarry Smith /* pull in vector x->xtmp */ 8619566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(scatter, xp, xtmp, INSERT_VALUES, SCATTER_FORWARD)); 8629566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(scatter, xp, xtmp, INSERT_VALUES, SCATTER_FORWARD)); 8631e07b27eSBarry Smith 864a5b23f4aSJose E. Roman /* copy vector entries into xred */ 8659566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(xtmp, &x_array)); 8661e07b27eSBarry Smith if (xred) { 8671e07b27eSBarry Smith PetscScalar *LA_xred; 8689566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(xred, &st, &ed)); 8691e07b27eSBarry Smith 8709566063dSJacob Faibussowitsch PetscCall(VecGetArray(xred, &LA_xred)); 8719371c9d4SSatish Balay for (i = 0; i < ed - st; i++) { LA_xred[i] = x_array[i]; } 8729566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(xred, &LA_xred)); 8731e07b27eSBarry Smith } 8749566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(xtmp, &x_array)); 8751e07b27eSBarry Smith 8761e07b27eSBarry Smith /* solve */ 87757f12427SDave May if (PCTelescope_isActiveRank(sred)) { 8789566063dSJacob Faibussowitsch PetscCall(KSPSolve(sred->ksp, xred, yred)); 8799566063dSJacob Faibussowitsch PetscCall(KSPCheckSolve(sred->ksp, pc, yred)); 8801e07b27eSBarry Smith } 8811e07b27eSBarry Smith 8821e07b27eSBarry Smith /* return vector */ 8839566063dSJacob Faibussowitsch PetscCall(VecGetArray(xtmp, &array)); 8841e07b27eSBarry Smith if (yred) { 8851e07b27eSBarry Smith const PetscScalar *LA_yred; 8869566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(yred, &st, &ed)); 8879566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(yred, &LA_yred)); 8889371c9d4SSatish Balay for (i = 0; i < ed - st; i++) { array[i] = LA_yred[i]; } 8899566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(yred, &LA_yred)); 8901e07b27eSBarry Smith } 8919566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(xtmp, &array)); 8929566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(scatter, xtmp, xp, INSERT_VALUES, SCATTER_REVERSE)); 8939566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(scatter, xtmp, xp, INSERT_VALUES, SCATTER_REVERSE)); 8949566063dSJacob Faibussowitsch PetscCall(MatMult(perm, xp, y)); 8951e07b27eSBarry Smith PetscFunctionReturn(0); 8961e07b27eSBarry Smith } 8971e07b27eSBarry Smith 8989371c9d4SSatish Balay PetscErrorCode PCApplyRichardson_Telescope_dmda(PC pc, Vec x, Vec y, Vec w, PetscReal rtol, PetscReal abstol, PetscReal dtol, PetscInt its, PetscBool zeroguess, PetscInt *outits, PCRichardsonConvergedReason *reason) { 899f650675bSDave May PC_Telescope sred = (PC_Telescope)pc->data; 900f650675bSDave May Mat perm; 901a1d91a28SDave May Vec xtmp, xp, yred; 902f650675bSDave May PetscInt i, st, ed; 903f650675bSDave May VecScatter scatter; 904f650675bSDave May const PetscScalar *x_array; 905c41e779fSDave May PetscBool default_init_guess_value = PETSC_FALSE; 906f650675bSDave May PC_Telescope_DMDACtx *ctx; 907f650675bSDave May 90857f12427SDave May PetscFunctionBegin; 909f650675bSDave May ctx = (PC_Telescope_DMDACtx *)sred->dm_ctx; 910f650675bSDave May xtmp = sred->xtmp; 911f650675bSDave May scatter = sred->scatter; 912f650675bSDave May yred = sred->yred; 913f650675bSDave May perm = ctx->permutation; 914f650675bSDave May xp = ctx->xp; 915f650675bSDave May 91608401ef6SPierre Jolivet PetscCheck(its <= 1, PetscObjectComm((PetscObject)pc), PETSC_ERR_SUP, "PCApplyRichardson_Telescope_dmda only supports max_it = 1"); 917f650675bSDave May *reason = (PCRichardsonConvergedReason)0; 918f650675bSDave May 919f650675bSDave May if (!zeroguess) { 9209566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescopeDMDA: Scattering y for non-zero-initial guess\n")); 921f650675bSDave May /* permute vector into ordering associated with re-partitioned dmda */ 9229566063dSJacob Faibussowitsch PetscCall(MatMultTranspose(perm, y, xp)); 923f650675bSDave May 924f650675bSDave May /* pull in vector x->xtmp */ 9259566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(scatter, xp, xtmp, INSERT_VALUES, SCATTER_FORWARD)); 9269566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(scatter, xp, xtmp, INSERT_VALUES, SCATTER_FORWARD)); 927f650675bSDave May 928a5b23f4aSJose E. Roman /* copy vector entries into xred */ 9299566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(xtmp, &x_array)); 930f650675bSDave May if (yred) { 931f650675bSDave May PetscScalar *LA_yred; 9329566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(yred, &st, &ed)); 9339566063dSJacob Faibussowitsch PetscCall(VecGetArray(yred, &LA_yred)); 9349371c9d4SSatish Balay for (i = 0; i < ed - st; i++) { LA_yred[i] = x_array[i]; } 9359566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(yred, &LA_yred)); 936f650675bSDave May } 9379566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(xtmp, &x_array)); 938f650675bSDave May } 939f650675bSDave May 94057f12427SDave May if (PCTelescope_isActiveRank(sred)) { 9419566063dSJacob Faibussowitsch PetscCall(KSPGetInitialGuessNonzero(sred->ksp, &default_init_guess_value)); 9429566063dSJacob Faibussowitsch if (!zeroguess) PetscCall(KSPSetInitialGuessNonzero(sred->ksp, PETSC_TRUE)); 943f650675bSDave May } 944f650675bSDave May 9459566063dSJacob Faibussowitsch PetscCall(PCApply_Telescope_dmda(pc, x, y)); 946f650675bSDave May 947*48a46eb9SPierre Jolivet if (PCTelescope_isActiveRank(sred)) PetscCall(KSPSetInitialGuessNonzero(sred->ksp, default_init_guess_value)); 948f650675bSDave May 949f650675bSDave May if (!*reason) *reason = PCRICHARDSON_CONVERGED_ITS; 950f650675bSDave May *outits = 1; 951f650675bSDave May PetscFunctionReturn(0); 952f650675bSDave May } 953f650675bSDave May 9549371c9d4SSatish Balay PetscErrorCode PCReset_Telescope_dmda(PC pc) { 9551e07b27eSBarry Smith PC_Telescope sred = (PC_Telescope)pc->data; 9561e07b27eSBarry Smith PC_Telescope_DMDACtx *ctx; 9571e07b27eSBarry Smith 9581e07b27eSBarry Smith PetscFunctionBegin; 9591e07b27eSBarry Smith ctx = (PC_Telescope_DMDACtx *)sred->dm_ctx; 9609566063dSJacob Faibussowitsch PetscCall(VecDestroy(&ctx->xp)); 9619566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ctx->permutation)); 9629566063dSJacob Faibussowitsch PetscCall(DMDestroy(&ctx->dmrepart)); 9639566063dSJacob Faibussowitsch PetscCall(PetscFree3(ctx->range_i_re, ctx->range_j_re, ctx->range_k_re)); 9649566063dSJacob Faibussowitsch PetscCall(PetscFree3(ctx->start_i_re, ctx->start_j_re, ctx->start_k_re)); 9651e07b27eSBarry Smith PetscFunctionReturn(0); 9661e07b27eSBarry Smith } 9671e07b27eSBarry Smith 9689371c9d4SSatish Balay PetscErrorCode DMView_DA_Short_3d(DM dm, PetscViewer v) { 9691e07b27eSBarry Smith PetscInt M, N, P, m, n, p, ndof, nsw; 9701e07b27eSBarry Smith MPI_Comm comm; 9711e07b27eSBarry Smith PetscMPIInt size; 9721e07b27eSBarry Smith const char *prefix; 9731e07b27eSBarry Smith 9741e07b27eSBarry Smith PetscFunctionBegin; 9759566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)dm, &comm)); 9769566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 9779566063dSJacob Faibussowitsch PetscCall(DMGetOptionsPrefix(dm, &prefix)); 9789566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, NULL, &M, &N, &P, &m, &n, &p, &ndof, &nsw, NULL, NULL, NULL, NULL)); 9799566063dSJacob Faibussowitsch if (prefix) PetscCall(PetscViewerASCIIPrintf(v, "DMDA Object: (%s) %d MPI processes\n", prefix, size)); 9809566063dSJacob Faibussowitsch else PetscCall(PetscViewerASCIIPrintf(v, "DMDA Object: %d MPI processes\n", size)); 98163a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(v, " M %" PetscInt_FMT " N %" PetscInt_FMT " P %" PetscInt_FMT " m %" PetscInt_FMT " n %" PetscInt_FMT " p %" PetscInt_FMT " dof %" PetscInt_FMT " overlap %" PetscInt_FMT "\n", M, N, P, m, n, p, ndof, nsw)); 9821e07b27eSBarry Smith PetscFunctionReturn(0); 9831e07b27eSBarry Smith } 9841e07b27eSBarry Smith 9859371c9d4SSatish Balay PetscErrorCode DMView_DA_Short_2d(DM dm, PetscViewer v) { 9861e07b27eSBarry Smith PetscInt M, N, m, n, ndof, nsw; 9871e07b27eSBarry Smith MPI_Comm comm; 9881e07b27eSBarry Smith PetscMPIInt size; 9891e07b27eSBarry Smith const char *prefix; 9901e07b27eSBarry Smith 9911e07b27eSBarry Smith PetscFunctionBegin; 9929566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)dm, &comm)); 9939566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 9949566063dSJacob Faibussowitsch PetscCall(DMGetOptionsPrefix(dm, &prefix)); 9959566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, NULL, &M, &N, NULL, &m, &n, NULL, &ndof, &nsw, NULL, NULL, NULL, NULL)); 9969566063dSJacob Faibussowitsch if (prefix) PetscCall(PetscViewerASCIIPrintf(v, "DMDA Object: (%s) %d MPI processes\n", prefix, size)); 9979566063dSJacob Faibussowitsch else PetscCall(PetscViewerASCIIPrintf(v, "DMDA Object: %d MPI processes\n", size)); 99863a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(v, " M %" PetscInt_FMT " N %" PetscInt_FMT " m %" PetscInt_FMT " n %" PetscInt_FMT " dof %" PetscInt_FMT " overlap %" PetscInt_FMT "\n", M, N, m, n, ndof, nsw)); 9991e07b27eSBarry Smith PetscFunctionReturn(0); 10001e07b27eSBarry Smith } 10011e07b27eSBarry Smith 10029371c9d4SSatish Balay PetscErrorCode DMView_DA_Short(DM dm, PetscViewer v) { 10031e07b27eSBarry Smith PetscInt dim; 10041e07b27eSBarry Smith 10051e07b27eSBarry Smith PetscFunctionBegin; 10069566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, &dim, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL)); 10071e07b27eSBarry Smith switch (dim) { 10089371c9d4SSatish Balay case 2: PetscCall(DMView_DA_Short_2d(dm, v)); break; 10099371c9d4SSatish Balay case 3: PetscCall(DMView_DA_Short_3d(dm, v)); break; 10101e07b27eSBarry Smith } 10111e07b27eSBarry Smith PetscFunctionReturn(0); 10121e07b27eSBarry Smith } 1013