11e07b27eSBarry Smith 2120bdd93SDave May #include <petsc/private/matimpl.h> 31e07b27eSBarry Smith #include <petsc/private/pcimpl.h> 45e897e82SDave May #include <petsc/private/dmimpl.h> 51e07b27eSBarry Smith #include <petscksp.h> /*I "petscksp.h" I*/ 61e07b27eSBarry Smith #include <petscdm.h> 71e07b27eSBarry Smith #include <petscdmda.h> 81e07b27eSBarry Smith 9575a0592SBarry Smith #include "../src/ksp/pc/impls/telescope/telescope.h" 101e07b27eSBarry Smith 11bf00f589SPatrick Sanan static PetscBool cited = PETSC_FALSE; 129371c9d4SSatish Balay static const char citation[] = "@inproceedings{MaySananRuppKnepleySmith2016,\n" 13bf00f589SPatrick Sanan " title = {Extreme-Scale Multigrid Components within PETSc},\n" 14bf00f589SPatrick Sanan " author = {Dave A. May and Patrick Sanan and Karl Rupp and Matthew G. Knepley and Barry F. Smith},\n" 15bf00f589SPatrick Sanan " booktitle = {Proceedings of the Platform for Advanced Scientific Computing Conference},\n" 16bf00f589SPatrick Sanan " series = {PASC '16},\n" 17bf00f589SPatrick Sanan " isbn = {978-1-4503-4126-4},\n" 18bf00f589SPatrick Sanan " location = {Lausanne, Switzerland},\n" 19bf00f589SPatrick Sanan " pages = {5:1--5:12},\n" 20bf00f589SPatrick Sanan " articleno = {5},\n" 21bf00f589SPatrick Sanan " numpages = {12},\n" 22a8d69d7bSBarry Smith " url = {https://doi.acm.org/10.1145/2929908.2929913},\n" 23bf00f589SPatrick Sanan " doi = {10.1145/2929908.2929913},\n" 24bf00f589SPatrick Sanan " acmid = {2929913},\n" 25bf00f589SPatrick Sanan " publisher = {ACM},\n" 26bf00f589SPatrick Sanan " address = {New York, NY, USA},\n" 27bf00f589SPatrick Sanan " keywords = {GPU, HPC, agglomeration, coarse-level solver, multigrid, parallel computing, preconditioning},\n" 28bf00f589SPatrick Sanan " year = {2016}\n" 29bf00f589SPatrick Sanan "}\n"; 30bf00f589SPatrick Sanan 31*d71ae5a4SJacob Faibussowitsch static PetscErrorCode _DMDADetermineRankFromGlobalIJK(PetscInt dim, PetscInt i, PetscInt j, PetscInt k, PetscInt Mp, PetscInt Np, PetscInt Pp, PetscInt start_i[], PetscInt start_j[], PetscInt start_k[], PetscInt span_i[], PetscInt span_j[], PetscInt span_k[], PetscMPIInt *_pi, PetscMPIInt *_pj, PetscMPIInt *_pk, PetscMPIInt *rank_re) 32*d71ae5a4SJacob Faibussowitsch { 331e07b27eSBarry Smith PetscInt pi, pj, pk, n; 341e07b27eSBarry Smith 351e07b27eSBarry Smith PetscFunctionBegin; 36137d0469SJed Brown *rank_re = -1; 37137d0469SJed Brown if (_pi) *_pi = -1; 38137d0469SJed Brown if (_pj) *_pj = -1; 39137d0469SJed Brown if (_pk) *_pk = -1; 401e07b27eSBarry Smith pi = pj = pk = -1; 411e07b27eSBarry Smith if (_pi) { 421e07b27eSBarry Smith for (n = 0; n < Mp; n++) { 431e07b27eSBarry Smith if ((i >= start_i[n]) && (i < start_i[n] + span_i[n])) { 441e07b27eSBarry Smith pi = n; 451e07b27eSBarry Smith break; 461e07b27eSBarry Smith } 471e07b27eSBarry Smith } 4863a3b9bcSJacob Faibussowitsch PetscCheck(pi != -1, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmda-ijk] pi cannot be determined : range %" PetscInt_FMT ", val %" PetscInt_FMT, Mp, i); 491e07b27eSBarry Smith *_pi = pi; 501e07b27eSBarry Smith } 511e07b27eSBarry Smith 521e07b27eSBarry Smith if (_pj) { 531e07b27eSBarry Smith for (n = 0; n < Np; n++) { 541e07b27eSBarry Smith if ((j >= start_j[n]) && (j < start_j[n] + span_j[n])) { 551e07b27eSBarry Smith pj = n; 561e07b27eSBarry Smith break; 571e07b27eSBarry Smith } 581e07b27eSBarry Smith } 5963a3b9bcSJacob Faibussowitsch PetscCheck(pj != -1, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmda-ijk] pj cannot be determined : range %" PetscInt_FMT ", val %" PetscInt_FMT, Np, j); 601e07b27eSBarry Smith *_pj = pj; 611e07b27eSBarry Smith } 621e07b27eSBarry Smith 631e07b27eSBarry Smith if (_pk) { 641e07b27eSBarry Smith for (n = 0; n < Pp; n++) { 651e07b27eSBarry Smith if ((k >= start_k[n]) && (k < start_k[n] + span_k[n])) { 661e07b27eSBarry Smith pk = n; 671e07b27eSBarry Smith break; 681e07b27eSBarry Smith } 691e07b27eSBarry Smith } 7063a3b9bcSJacob Faibussowitsch PetscCheck(pk != -1, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmda-ijk] pk cannot be determined : range %" PetscInt_FMT ", val %" PetscInt_FMT, Pp, k); 711e07b27eSBarry Smith *_pk = pk; 721e07b27eSBarry Smith } 731e07b27eSBarry Smith 741e07b27eSBarry Smith switch (dim) { 75*d71ae5a4SJacob Faibussowitsch case 1: 76*d71ae5a4SJacob Faibussowitsch *rank_re = pi; 77*d71ae5a4SJacob Faibussowitsch break; 78*d71ae5a4SJacob Faibussowitsch case 2: 79*d71ae5a4SJacob Faibussowitsch *rank_re = pi + pj * Mp; 80*d71ae5a4SJacob Faibussowitsch break; 81*d71ae5a4SJacob Faibussowitsch case 3: 82*d71ae5a4SJacob Faibussowitsch *rank_re = pi + pj * Mp + pk * (Mp * Np); 83*d71ae5a4SJacob Faibussowitsch break; 841e07b27eSBarry Smith } 851e07b27eSBarry Smith PetscFunctionReturn(0); 861e07b27eSBarry Smith } 871e07b27eSBarry Smith 88*d71ae5a4SJacob Faibussowitsch static PetscErrorCode _DMDADetermineGlobalS0(PetscInt dim, PetscMPIInt rank_re, PetscInt Mp_re, PetscInt Np_re, PetscInt Pp_re, PetscInt range_i_re[], PetscInt range_j_re[], PetscInt range_k_re[], PetscInt *s0) 89*d71ae5a4SJacob Faibussowitsch { 90c6a0d831SBarry Smith PetscInt i, j, k, start_IJK = 0; 911e07b27eSBarry Smith PetscInt rank_ijk; 921e07b27eSBarry Smith 931e07b27eSBarry Smith PetscFunctionBegin; 941e07b27eSBarry Smith switch (dim) { 951e07b27eSBarry Smith case 1: 961e07b27eSBarry Smith for (i = 0; i < Mp_re; i++) { 971e07b27eSBarry Smith rank_ijk = i; 98ad540459SPierre Jolivet if (rank_ijk < rank_re) start_IJK += range_i_re[i]; 991e07b27eSBarry Smith } 1001e07b27eSBarry Smith break; 1011e07b27eSBarry Smith case 2: 1021e07b27eSBarry Smith for (j = 0; j < Np_re; j++) { 1031e07b27eSBarry Smith for (i = 0; i < Mp_re; i++) { 1041e07b27eSBarry Smith rank_ijk = i + j * Mp_re; 105ad540459SPierre Jolivet if (rank_ijk < rank_re) start_IJK += range_i_re[i] * range_j_re[j]; 1061e07b27eSBarry Smith } 1071e07b27eSBarry Smith } 1081e07b27eSBarry Smith break; 1091e07b27eSBarry Smith case 3: 1101e07b27eSBarry Smith for (k = 0; k < Pp_re; k++) { 1111e07b27eSBarry Smith for (j = 0; j < Np_re; j++) { 1121e07b27eSBarry Smith for (i = 0; i < Mp_re; i++) { 1131e07b27eSBarry Smith rank_ijk = i + j * Mp_re + k * Mp_re * Np_re; 114ad540459SPierre Jolivet if (rank_ijk < rank_re) start_IJK += range_i_re[i] * range_j_re[j] * range_k_re[k]; 1151e07b27eSBarry Smith } 1161e07b27eSBarry Smith } 1171e07b27eSBarry Smith } 1181e07b27eSBarry Smith break; 1191e07b27eSBarry Smith } 1201e07b27eSBarry Smith *s0 = start_IJK; 1211e07b27eSBarry Smith PetscFunctionReturn(0); 1221e07b27eSBarry Smith } 1231e07b27eSBarry Smith 124*d71ae5a4SJacob Faibussowitsch static PetscErrorCode PCTelescopeSetUp_dmda_repart_coors2d(PC_Telescope sred, DM dm, DM subdm) 125*d71ae5a4SJacob Faibussowitsch { 1261e07b27eSBarry Smith DM cdm; 1271e07b27eSBarry Smith Vec coor, coor_natural, perm_coors; 1281e07b27eSBarry Smith PetscInt i, j, si, sj, ni, nj, M, N, Ml, Nl, c, nidx; 1291e07b27eSBarry Smith PetscInt *fine_indices; 1301e07b27eSBarry Smith IS is_fine, is_local; 1311e07b27eSBarry Smith VecScatter sctx; 1321e07b27eSBarry Smith 1331e07b27eSBarry Smith PetscFunctionBegin; 1349566063dSJacob Faibussowitsch PetscCall(DMGetCoordinates(dm, &coor)); 1351e07b27eSBarry Smith if (!coor) return (0); 13648a46eb9SPierre Jolivet if (PCTelescope_isActiveRank(sred)) PetscCall(DMDASetUniformCoordinates(subdm, 0.0, 1.0, 0.0, 1.0, 0.0, 1.0)); 1371e07b27eSBarry Smith /* Get the coordinate vector from the distributed array */ 1389566063dSJacob Faibussowitsch PetscCall(DMGetCoordinateDM(dm, &cdm)); 1399566063dSJacob Faibussowitsch PetscCall(DMDACreateNaturalVector(cdm, &coor_natural)); 1401e07b27eSBarry Smith 1419566063dSJacob Faibussowitsch PetscCall(DMDAGlobalToNaturalBegin(cdm, coor, INSERT_VALUES, coor_natural)); 1429566063dSJacob Faibussowitsch PetscCall(DMDAGlobalToNaturalEnd(cdm, coor, INSERT_VALUES, coor_natural)); 1431e07b27eSBarry Smith 1441e07b27eSBarry Smith /* get indices of the guys I want to grab */ 1459566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, NULL, &M, &N, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL)); 14657f12427SDave May if (PCTelescope_isActiveRank(sred)) { 1479566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(subdm, &si, &sj, NULL, &ni, &nj, NULL)); 14815dd08bcSBarry Smith Ml = ni; 14915dd08bcSBarry Smith Nl = nj; 1501e07b27eSBarry Smith } else { 151c41e779fSDave May si = sj = 0; 152c41e779fSDave May ni = nj = 0; 1533ac26c5eSBarry Smith Ml = Nl = 0; 1541e07b27eSBarry Smith } 1551e07b27eSBarry Smith 1569566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(Ml * Nl * 2, &fine_indices)); 1571e07b27eSBarry Smith c = 0; 15857f12427SDave May if (PCTelescope_isActiveRank(sred)) { 1591e07b27eSBarry Smith for (j = sj; j < sj + nj; j++) { 1601e07b27eSBarry Smith for (i = si; i < si + ni; i++) { 1611e07b27eSBarry Smith nidx = (i) + (j)*M; 1621e07b27eSBarry Smith fine_indices[c] = 2 * nidx; 1631e07b27eSBarry Smith fine_indices[c + 1] = 2 * nidx + 1; 1641e07b27eSBarry Smith c = c + 2; 1651e07b27eSBarry Smith } 1661e07b27eSBarry Smith } 16763a3b9bcSJacob Faibussowitsch PetscCheck(c == Ml * Nl * 2, PETSC_COMM_SELF, PETSC_ERR_PLIB, "c %" PetscInt_FMT " should equal 2 * Ml %" PetscInt_FMT " * Nl %" PetscInt_FMT, c, Ml, Nl); 1681e07b27eSBarry Smith } 1691e07b27eSBarry Smith 1701e07b27eSBarry Smith /* generate scatter */ 1719566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PetscObjectComm((PetscObject)dm), Ml * Nl * 2, fine_indices, PETSC_USE_POINTER, &is_fine)); 1729566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, Ml * Nl * 2, 0, 1, &is_local)); 1731e07b27eSBarry Smith 1741e07b27eSBarry Smith /* scatter */ 1759566063dSJacob Faibussowitsch PetscCall(VecCreate(PETSC_COMM_SELF, &perm_coors)); 1769566063dSJacob Faibussowitsch PetscCall(VecSetSizes(perm_coors, PETSC_DECIDE, Ml * Nl * 2)); 1779566063dSJacob Faibussowitsch PetscCall(VecSetType(perm_coors, VECSEQ)); 1781e07b27eSBarry Smith 1799566063dSJacob Faibussowitsch PetscCall(VecScatterCreate(coor_natural, is_fine, perm_coors, is_local, &sctx)); 1809566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(sctx, coor_natural, perm_coors, INSERT_VALUES, SCATTER_FORWARD)); 1819566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(sctx, coor_natural, perm_coors, INSERT_VALUES, SCATTER_FORWARD)); 1821e07b27eSBarry Smith /* access */ 18357f12427SDave May if (PCTelescope_isActiveRank(sred)) { 1841e07b27eSBarry Smith Vec _coors; 1851e07b27eSBarry Smith const PetscScalar *LA_perm; 1861e07b27eSBarry Smith PetscScalar *LA_coors; 1871e07b27eSBarry Smith 1889566063dSJacob Faibussowitsch PetscCall(DMGetCoordinates(subdm, &_coors)); 1899566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(perm_coors, &LA_perm)); 1909566063dSJacob Faibussowitsch PetscCall(VecGetArray(_coors, &LA_coors)); 191ad540459SPierre Jolivet for (i = 0; i < Ml * Nl * 2; i++) LA_coors[i] = LA_perm[i]; 1929566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(_coors, &LA_coors)); 1939566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(perm_coors, &LA_perm)); 1941e07b27eSBarry Smith } 1951e07b27eSBarry Smith 1961e07b27eSBarry Smith /* update local coords */ 19757f12427SDave May if (PCTelescope_isActiveRank(sred)) { 1981e07b27eSBarry Smith DM _dmc; 1991e07b27eSBarry Smith Vec _coors, _coors_local; 2009566063dSJacob Faibussowitsch PetscCall(DMGetCoordinateDM(subdm, &_dmc)); 2019566063dSJacob Faibussowitsch PetscCall(DMGetCoordinates(subdm, &_coors)); 2029566063dSJacob Faibussowitsch PetscCall(DMGetCoordinatesLocal(subdm, &_coors_local)); 2039566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(_dmc, _coors, INSERT_VALUES, _coors_local)); 2049566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(_dmc, _coors, INSERT_VALUES, _coors_local)); 2051e07b27eSBarry Smith } 2069566063dSJacob Faibussowitsch PetscCall(VecScatterDestroy(&sctx)); 2079566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is_fine)); 2089566063dSJacob Faibussowitsch PetscCall(PetscFree(fine_indices)); 2099566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is_local)); 2109566063dSJacob Faibussowitsch PetscCall(VecDestroy(&perm_coors)); 2119566063dSJacob Faibussowitsch PetscCall(VecDestroy(&coor_natural)); 2121e07b27eSBarry Smith PetscFunctionReturn(0); 2131e07b27eSBarry Smith } 2141e07b27eSBarry Smith 215*d71ae5a4SJacob Faibussowitsch static PetscErrorCode PCTelescopeSetUp_dmda_repart_coors3d(PC_Telescope sred, DM dm, DM subdm) 216*d71ae5a4SJacob Faibussowitsch { 2171e07b27eSBarry Smith DM cdm; 2181e07b27eSBarry Smith Vec coor, coor_natural, perm_coors; 2191e07b27eSBarry Smith PetscInt i, j, k, si, sj, sk, ni, nj, nk, M, N, P, Ml, Nl, Pl, c, nidx; 2201e07b27eSBarry Smith PetscInt *fine_indices; 2211e07b27eSBarry Smith IS is_fine, is_local; 2221e07b27eSBarry Smith VecScatter sctx; 2231e07b27eSBarry Smith 2241e07b27eSBarry Smith PetscFunctionBegin; 2259566063dSJacob Faibussowitsch PetscCall(DMGetCoordinates(dm, &coor)); 2261e07b27eSBarry Smith if (!coor) PetscFunctionReturn(0); 2271e07b27eSBarry Smith 22848a46eb9SPierre Jolivet if (PCTelescope_isActiveRank(sred)) PetscCall(DMDASetUniformCoordinates(subdm, 0.0, 1.0, 0.0, 1.0, 0.0, 1.0)); 2291e07b27eSBarry Smith 2301e07b27eSBarry Smith /* Get the coordinate vector from the distributed array */ 2319566063dSJacob Faibussowitsch PetscCall(DMGetCoordinateDM(dm, &cdm)); 2329566063dSJacob Faibussowitsch PetscCall(DMDACreateNaturalVector(cdm, &coor_natural)); 2339566063dSJacob Faibussowitsch PetscCall(DMDAGlobalToNaturalBegin(cdm, coor, INSERT_VALUES, coor_natural)); 2349566063dSJacob Faibussowitsch PetscCall(DMDAGlobalToNaturalEnd(cdm, coor, INSERT_VALUES, coor_natural)); 2351e07b27eSBarry Smith 2361e07b27eSBarry Smith /* get indices of the guys I want to grab */ 2379566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, NULL, &M, &N, &P, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL)); 2381e07b27eSBarry Smith 23957f12427SDave May if (PCTelescope_isActiveRank(sred)) { 2409566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(subdm, &si, &sj, &sk, &ni, &nj, &nk)); 241553d0ae9SBarry Smith Ml = ni; 242553d0ae9SBarry Smith Nl = nj; 243553d0ae9SBarry Smith Pl = nk; 2441e07b27eSBarry Smith } else { 245c41e779fSDave May si = sj = sk = 0; 246c41e779fSDave May ni = nj = nk = 0; 2473ac26c5eSBarry Smith Ml = Nl = Pl = 0; 2481e07b27eSBarry Smith } 2491e07b27eSBarry Smith 2509566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(Ml * Nl * Pl * 3, &fine_indices)); 2511e07b27eSBarry Smith 2521e07b27eSBarry Smith c = 0; 25357f12427SDave May if (PCTelescope_isActiveRank(sred)) { 2541e07b27eSBarry Smith for (k = sk; k < sk + nk; k++) { 2551e07b27eSBarry Smith for (j = sj; j < sj + nj; j++) { 2561e07b27eSBarry Smith for (i = si; i < si + ni; i++) { 2571e07b27eSBarry Smith nidx = (i) + (j)*M + (k)*M * N; 2581e07b27eSBarry Smith fine_indices[c] = 3 * nidx; 2591e07b27eSBarry Smith fine_indices[c + 1] = 3 * nidx + 1; 2601e07b27eSBarry Smith fine_indices[c + 2] = 3 * nidx + 2; 2611e07b27eSBarry Smith c = c + 3; 2621e07b27eSBarry Smith } 2631e07b27eSBarry Smith } 2641e07b27eSBarry Smith } 2651e07b27eSBarry Smith } 2661e07b27eSBarry Smith 2671e07b27eSBarry Smith /* generate scatter */ 2689566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PetscObjectComm((PetscObject)dm), Ml * Nl * Pl * 3, fine_indices, PETSC_USE_POINTER, &is_fine)); 2699566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, Ml * Nl * Pl * 3, 0, 1, &is_local)); 2701e07b27eSBarry Smith 2711e07b27eSBarry Smith /* scatter */ 2729566063dSJacob Faibussowitsch PetscCall(VecCreate(PETSC_COMM_SELF, &perm_coors)); 2739566063dSJacob Faibussowitsch PetscCall(VecSetSizes(perm_coors, PETSC_DECIDE, Ml * Nl * Pl * 3)); 2749566063dSJacob Faibussowitsch PetscCall(VecSetType(perm_coors, VECSEQ)); 2759566063dSJacob Faibussowitsch PetscCall(VecScatterCreate(coor_natural, is_fine, perm_coors, is_local, &sctx)); 2769566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(sctx, coor_natural, perm_coors, INSERT_VALUES, SCATTER_FORWARD)); 2779566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(sctx, coor_natural, perm_coors, INSERT_VALUES, SCATTER_FORWARD)); 2781e07b27eSBarry Smith 2791e07b27eSBarry Smith /* access */ 28057f12427SDave May if (PCTelescope_isActiveRank(sred)) { 2811e07b27eSBarry Smith Vec _coors; 2821e07b27eSBarry Smith const PetscScalar *LA_perm; 2831e07b27eSBarry Smith PetscScalar *LA_coors; 2841e07b27eSBarry Smith 2859566063dSJacob Faibussowitsch PetscCall(DMGetCoordinates(subdm, &_coors)); 2869566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(perm_coors, &LA_perm)); 2879566063dSJacob Faibussowitsch PetscCall(VecGetArray(_coors, &LA_coors)); 288ad540459SPierre Jolivet for (i = 0; i < Ml * Nl * Pl * 3; i++) LA_coors[i] = LA_perm[i]; 2899566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(_coors, &LA_coors)); 2909566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(perm_coors, &LA_perm)); 2911e07b27eSBarry Smith } 2921e07b27eSBarry Smith 2931e07b27eSBarry Smith /* update local coords */ 29457f12427SDave May if (PCTelescope_isActiveRank(sred)) { 2951e07b27eSBarry Smith DM _dmc; 2961e07b27eSBarry Smith Vec _coors, _coors_local; 2971e07b27eSBarry Smith 2989566063dSJacob Faibussowitsch PetscCall(DMGetCoordinateDM(subdm, &_dmc)); 2999566063dSJacob Faibussowitsch PetscCall(DMGetCoordinates(subdm, &_coors)); 3009566063dSJacob Faibussowitsch PetscCall(DMGetCoordinatesLocal(subdm, &_coors_local)); 3019566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(_dmc, _coors, INSERT_VALUES, _coors_local)); 3029566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(_dmc, _coors, INSERT_VALUES, _coors_local)); 3031e07b27eSBarry Smith } 3041e07b27eSBarry Smith 3059566063dSJacob Faibussowitsch PetscCall(VecScatterDestroy(&sctx)); 3069566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is_fine)); 3079566063dSJacob Faibussowitsch PetscCall(PetscFree(fine_indices)); 3089566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is_local)); 3099566063dSJacob Faibussowitsch PetscCall(VecDestroy(&perm_coors)); 3109566063dSJacob Faibussowitsch PetscCall(VecDestroy(&coor_natural)); 3111e07b27eSBarry Smith PetscFunctionReturn(0); 3121e07b27eSBarry Smith } 3131e07b27eSBarry Smith 314*d71ae5a4SJacob Faibussowitsch static PetscErrorCode PCTelescopeSetUp_dmda_repart_coors(PC pc, PC_Telescope sred, PC_Telescope_DMDACtx *ctx) 315*d71ae5a4SJacob Faibussowitsch { 3161e07b27eSBarry Smith PetscInt dim; 3171e07b27eSBarry Smith DM dm, subdm; 3181e07b27eSBarry Smith PetscSubcomm psubcomm; 3191e07b27eSBarry Smith MPI_Comm comm; 3201e07b27eSBarry Smith Vec coor; 3211e07b27eSBarry Smith 3221e07b27eSBarry Smith PetscFunctionBegin; 3239566063dSJacob Faibussowitsch PetscCall(PCGetDM(pc, &dm)); 3249566063dSJacob Faibussowitsch PetscCall(DMGetCoordinates(dm, &coor)); 3251e07b27eSBarry Smith if (!coor) PetscFunctionReturn(0); 3261e07b27eSBarry Smith psubcomm = sred->psubcomm; 3271e07b27eSBarry Smith comm = PetscSubcommParent(psubcomm); 3281e07b27eSBarry Smith subdm = ctx->dmrepart; 3291e07b27eSBarry Smith 3309566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: setting up the coordinates (DMDA)\n")); 3319566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, &dim, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL)); 3321e07b27eSBarry Smith switch (dim) { 333*d71ae5a4SJacob Faibussowitsch case 1: 334*d71ae5a4SJacob Faibussowitsch SETERRQ(comm, PETSC_ERR_SUP, "Telescope: DMDA (1D) repartitioning not provided"); 335*d71ae5a4SJacob Faibussowitsch case 2: 336*d71ae5a4SJacob Faibussowitsch PetscCall(PCTelescopeSetUp_dmda_repart_coors2d(sred, dm, subdm)); 337*d71ae5a4SJacob Faibussowitsch break; 338*d71ae5a4SJacob Faibussowitsch case 3: 339*d71ae5a4SJacob Faibussowitsch PetscCall(PCTelescopeSetUp_dmda_repart_coors3d(sred, dm, subdm)); 340*d71ae5a4SJacob Faibussowitsch break; 3411e07b27eSBarry Smith } 3421e07b27eSBarry Smith PetscFunctionReturn(0); 3431e07b27eSBarry Smith } 3441e07b27eSBarry Smith 3451e07b27eSBarry Smith /* setup repartitioned dm */ 346*d71ae5a4SJacob Faibussowitsch PetscErrorCode PCTelescopeSetUp_dmda_repart(PC pc, PC_Telescope sred, PC_Telescope_DMDACtx *ctx) 347*d71ae5a4SJacob Faibussowitsch { 3481e07b27eSBarry Smith DM dm; 3491e07b27eSBarry Smith PetscInt dim, nx, ny, nz, ndof, nsw, sum, k; 3501e07b27eSBarry Smith DMBoundaryType bx, by, bz; 3511e07b27eSBarry Smith DMDAStencilType stencil; 3521e07b27eSBarry Smith const PetscInt *_range_i_re; 3531e07b27eSBarry Smith const PetscInt *_range_j_re; 3541e07b27eSBarry Smith const PetscInt *_range_k_re; 3551e07b27eSBarry Smith DMDAInterpolationType itype; 3561e07b27eSBarry Smith PetscInt refine_x, refine_y, refine_z; 3571e07b27eSBarry Smith MPI_Comm comm, subcomm; 3581e07b27eSBarry Smith const char *prefix; 3591e07b27eSBarry Smith 3601e07b27eSBarry Smith PetscFunctionBegin; 3611e07b27eSBarry Smith comm = PetscSubcommParent(sred->psubcomm); 3621e07b27eSBarry Smith subcomm = PetscSubcommChild(sred->psubcomm); 3639566063dSJacob Faibussowitsch PetscCall(PCGetDM(pc, &dm)); 3641e07b27eSBarry Smith 3659566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, &dim, &nx, &ny, &nz, NULL, NULL, NULL, &ndof, &nsw, &bx, &by, &bz, &stencil)); 3669566063dSJacob Faibussowitsch PetscCall(DMDAGetInterpolationType(dm, &itype)); 3679566063dSJacob Faibussowitsch PetscCall(DMDAGetRefinementFactor(dm, &refine_x, &refine_y, &refine_z)); 3681e07b27eSBarry Smith 3691e07b27eSBarry Smith ctx->dmrepart = NULL; 3701e07b27eSBarry Smith _range_i_re = _range_j_re = _range_k_re = NULL; 3711e07b27eSBarry Smith /* Create DMDA on the child communicator */ 37257f12427SDave May if (PCTelescope_isActiveRank(sred)) { 3731e07b27eSBarry Smith switch (dim) { 3741e07b27eSBarry Smith case 1: 3759566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: setting up the DMDA on comm subset (1D)\n")); 3769566063dSJacob Faibussowitsch /* PetscCall(DMDACreate1d(subcomm,bx,nx,ndof,nsw,NULL,&ctx->dmrepart)); */ 3771e07b27eSBarry Smith ny = nz = 1; 3781e07b27eSBarry Smith by = bz = DM_BOUNDARY_NONE; 3791e07b27eSBarry Smith break; 3801e07b27eSBarry Smith case 2: 3819566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: setting up the DMDA on comm subset (2D)\n")); 3829566063dSJacob Faibussowitsch /* PetscCall(DMDACreate2d(subcomm,bx,by,stencil,nx,ny, PETSC_DECIDE,PETSC_DECIDE, 3839566063dSJacob Faibussowitsch ndof,nsw, NULL,NULL,&ctx->dmrepart)); */ 3841e07b27eSBarry Smith nz = 1; 3851e07b27eSBarry Smith bz = DM_BOUNDARY_NONE; 3861e07b27eSBarry Smith break; 3871e07b27eSBarry Smith case 3: 3889566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: setting up the DMDA on comm subset (3D)\n")); 3899566063dSJacob Faibussowitsch /* PetscCall(DMDACreate3d(subcomm,bx,by,bz,stencil,nx,ny,nz, 3909566063dSJacob Faibussowitsch PETSC_DECIDE,PETSC_DECIDE,PETSC_DECIDE, ndof,nsw, NULL,NULL,NULL,&ctx->dmrepart)); */ 3911e07b27eSBarry Smith break; 3921e07b27eSBarry Smith } 3931e07b27eSBarry Smith /* 3941e07b27eSBarry Smith The API DMDACreate1d(), DMDACreate2d(), DMDACreate3d() does not allow us to set/append 3951e07b27eSBarry Smith a unique option prefix for the DM, thus I prefer to expose the contents of these API's here. 3961e07b27eSBarry Smith This allows users to control the partitioning of the subDM. 3971e07b27eSBarry Smith */ 3989566063dSJacob Faibussowitsch PetscCall(DMDACreate(subcomm, &ctx->dmrepart)); 3991e07b27eSBarry Smith /* Set unique option prefix name */ 4009566063dSJacob Faibussowitsch PetscCall(KSPGetOptionsPrefix(sred->ksp, &prefix)); 4019566063dSJacob Faibussowitsch PetscCall(DMSetOptionsPrefix(ctx->dmrepart, prefix)); 4029566063dSJacob Faibussowitsch PetscCall(DMAppendOptionsPrefix(ctx->dmrepart, "repart_")); 4031e07b27eSBarry Smith /* standard setup from DMDACreate{1,2,3}d() */ 4049566063dSJacob Faibussowitsch PetscCall(DMSetDimension(ctx->dmrepart, dim)); 4059566063dSJacob Faibussowitsch PetscCall(DMDASetSizes(ctx->dmrepart, nx, ny, nz)); 4069566063dSJacob Faibussowitsch PetscCall(DMDASetNumProcs(ctx->dmrepart, PETSC_DECIDE, PETSC_DECIDE, PETSC_DECIDE)); 4079566063dSJacob Faibussowitsch PetscCall(DMDASetBoundaryType(ctx->dmrepart, bx, by, bz)); 4089566063dSJacob Faibussowitsch PetscCall(DMDASetDof(ctx->dmrepart, ndof)); 4099566063dSJacob Faibussowitsch PetscCall(DMDASetStencilType(ctx->dmrepart, stencil)); 4109566063dSJacob Faibussowitsch PetscCall(DMDASetStencilWidth(ctx->dmrepart, nsw)); 4119566063dSJacob Faibussowitsch PetscCall(DMDASetOwnershipRanges(ctx->dmrepart, NULL, NULL, NULL)); 4129566063dSJacob Faibussowitsch PetscCall(DMSetFromOptions(ctx->dmrepart)); 4139566063dSJacob Faibussowitsch PetscCall(DMSetUp(ctx->dmrepart)); 4141e07b27eSBarry Smith /* Set refinement factors and interpolation type from the partent */ 4159566063dSJacob Faibussowitsch PetscCall(DMDASetRefinementFactor(ctx->dmrepart, refine_x, refine_y, refine_z)); 4169566063dSJacob Faibussowitsch PetscCall(DMDASetInterpolationType(ctx->dmrepart, itype)); 4171e07b27eSBarry Smith 4189566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(ctx->dmrepart, NULL, NULL, NULL, NULL, &ctx->Mp_re, &ctx->Np_re, &ctx->Pp_re, NULL, NULL, NULL, NULL, NULL, NULL)); 4199566063dSJacob Faibussowitsch PetscCall(DMDAGetOwnershipRanges(ctx->dmrepart, &_range_i_re, &_range_j_re, &_range_k_re)); 4205e897e82SDave May 4215e897e82SDave May ctx->dmrepart->ops->creatematrix = dm->ops->creatematrix; 4225e897e82SDave May ctx->dmrepart->ops->createdomaindecomposition = dm->ops->createdomaindecomposition; 4231e07b27eSBarry Smith } 4241e07b27eSBarry Smith 4251e07b27eSBarry Smith /* generate ranges for repartitioned dm */ 4261e07b27eSBarry Smith /* note - assume rank 0 always participates */ 427071fcb05SBarry Smith /* TODO: use a single MPI call */ 4289566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(&ctx->Mp_re, 1, MPIU_INT, 0, comm)); 4299566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(&ctx->Np_re, 1, MPIU_INT, 0, comm)); 4309566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(&ctx->Pp_re, 1, MPIU_INT, 0, comm)); 4311e07b27eSBarry Smith 4329566063dSJacob Faibussowitsch PetscCall(PetscCalloc3(ctx->Mp_re, &ctx->range_i_re, ctx->Np_re, &ctx->range_j_re, ctx->Pp_re, &ctx->range_k_re)); 4331e07b27eSBarry Smith 4349566063dSJacob Faibussowitsch if (_range_i_re) PetscCall(PetscArraycpy(ctx->range_i_re, _range_i_re, ctx->Mp_re)); 4359566063dSJacob Faibussowitsch if (_range_j_re) PetscCall(PetscArraycpy(ctx->range_j_re, _range_j_re, ctx->Np_re)); 4369566063dSJacob Faibussowitsch if (_range_k_re) PetscCall(PetscArraycpy(ctx->range_k_re, _range_k_re, ctx->Pp_re)); 4371e07b27eSBarry Smith 438071fcb05SBarry Smith /* TODO: use a single MPI call */ 4399566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(ctx->range_i_re, ctx->Mp_re, MPIU_INT, 0, comm)); 4409566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(ctx->range_j_re, ctx->Np_re, MPIU_INT, 0, comm)); 4419566063dSJacob Faibussowitsch PetscCallMPI(MPI_Bcast(ctx->range_k_re, ctx->Pp_re, MPIU_INT, 0, comm)); 4421e07b27eSBarry Smith 4439566063dSJacob Faibussowitsch PetscCall(PetscMalloc3(ctx->Mp_re, &ctx->start_i_re, ctx->Np_re, &ctx->start_j_re, ctx->Pp_re, &ctx->start_k_re)); 4441e07b27eSBarry Smith 4451e07b27eSBarry Smith sum = 0; 4461e07b27eSBarry Smith for (k = 0; k < ctx->Mp_re; k++) { 4471e07b27eSBarry Smith ctx->start_i_re[k] = sum; 4481e07b27eSBarry Smith sum += ctx->range_i_re[k]; 4491e07b27eSBarry Smith } 4501e07b27eSBarry Smith 4511e07b27eSBarry Smith sum = 0; 4521e07b27eSBarry Smith for (k = 0; k < ctx->Np_re; k++) { 4531e07b27eSBarry Smith ctx->start_j_re[k] = sum; 4541e07b27eSBarry Smith sum += ctx->range_j_re[k]; 4551e07b27eSBarry Smith } 4561e07b27eSBarry Smith 4571e07b27eSBarry Smith sum = 0; 4581e07b27eSBarry Smith for (k = 0; k < ctx->Pp_re; k++) { 4591e07b27eSBarry Smith ctx->start_k_re[k] = sum; 4601e07b27eSBarry Smith sum += ctx->range_k_re[k]; 4611e07b27eSBarry Smith } 4621e07b27eSBarry Smith 463ba1c3560SDave May /* attach repartitioned dm to child ksp */ 464ba1c3560SDave May { 465ba1c3560SDave May PetscErrorCode (*dmksp_func)(KSP, Mat, Mat, void *); 466ba1c3560SDave May void *dmksp_ctx; 467ba1c3560SDave May 4689566063dSJacob Faibussowitsch PetscCall(DMKSPGetComputeOperators(dm, &dmksp_func, &dmksp_ctx)); 469ba1c3560SDave May 4701e07b27eSBarry Smith /* attach dm to ksp on sub communicator */ 47157f12427SDave May if (PCTelescope_isActiveRank(sred)) { 4729566063dSJacob Faibussowitsch PetscCall(KSPSetDM(sred->ksp, ctx->dmrepart)); 473ba1c3560SDave May 474c5db1f53SDave May if (!dmksp_func || sred->ignore_kspcomputeoperators) { 4759566063dSJacob Faibussowitsch PetscCall(KSPSetDMActive(sred->ksp, PETSC_FALSE)); 476ba1c3560SDave May } else { 477ba1c3560SDave May /* sub ksp inherits dmksp_func and context provided by user */ 4789566063dSJacob Faibussowitsch PetscCall(KSPSetComputeOperators(sred->ksp, dmksp_func, dmksp_ctx)); 4799566063dSJacob Faibussowitsch PetscCall(KSPSetDMActive(sred->ksp, PETSC_TRUE)); 480ba1c3560SDave May } 481ba1c3560SDave May } 4821e07b27eSBarry Smith } 4831e07b27eSBarry Smith PetscFunctionReturn(0); 4841e07b27eSBarry Smith } 4851e07b27eSBarry Smith 486*d71ae5a4SJacob Faibussowitsch PetscErrorCode PCTelescopeSetUp_dmda_permutation_3d(PC pc, PC_Telescope sred, PC_Telescope_DMDACtx *ctx) 487*d71ae5a4SJacob Faibussowitsch { 4881e07b27eSBarry Smith DM dm; 4891e07b27eSBarry Smith MPI_Comm comm; 4901e07b27eSBarry Smith Mat Pscalar, P; 4911e07b27eSBarry Smith PetscInt ndof; 4921e07b27eSBarry Smith PetscInt i, j, k, location, startI[3], endI[3], lenI[3], nx, ny, nz; 4931e07b27eSBarry Smith PetscInt sr, er, Mr; 4941e07b27eSBarry Smith Vec V; 4951e07b27eSBarry Smith 4961e07b27eSBarry Smith PetscFunctionBegin; 4979566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: setting up the permutation matrix (DMDA-3D)\n")); 4989566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)pc, &comm)); 4991e07b27eSBarry Smith 5009566063dSJacob Faibussowitsch PetscCall(PCGetDM(pc, &dm)); 5019566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, NULL, &nx, &ny, &nz, NULL, NULL, NULL, &ndof, NULL, NULL, NULL, NULL, NULL)); 5021e07b27eSBarry Smith 5039566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(dm, &V)); 5049566063dSJacob Faibussowitsch PetscCall(VecGetSize(V, &Mr)); 5059566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(V, &sr, &er)); 5069566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(dm, &V)); 5071e07b27eSBarry Smith sr = sr / ndof; 5081e07b27eSBarry Smith er = er / ndof; 5091e07b27eSBarry Smith Mr = Mr / ndof; 5101e07b27eSBarry Smith 5119566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &Pscalar)); 5129566063dSJacob Faibussowitsch PetscCall(MatSetSizes(Pscalar, (er - sr), (er - sr), Mr, Mr)); 5139566063dSJacob Faibussowitsch PetscCall(MatSetType(Pscalar, MATAIJ)); 5149566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation(Pscalar, 1, NULL)); 5159566063dSJacob Faibussowitsch PetscCall(MatMPIAIJSetPreallocation(Pscalar, 1, NULL, 1, NULL)); 5161e07b27eSBarry Smith 5179566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(dm, NULL, NULL, NULL, &lenI[0], &lenI[1], &lenI[2])); 5189566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(dm, &startI[0], &startI[1], &startI[2], &endI[0], &endI[1], &endI[2])); 5191e07b27eSBarry Smith endI[0] += startI[0]; 5201e07b27eSBarry Smith endI[1] += startI[1]; 5211e07b27eSBarry Smith endI[2] += startI[2]; 5221e07b27eSBarry Smith 5231e07b27eSBarry Smith for (k = startI[2]; k < endI[2]; k++) { 5241e07b27eSBarry Smith for (j = startI[1]; j < endI[1]; j++) { 5251e07b27eSBarry Smith for (i = startI[0]; i < endI[0]; i++) { 5261e07b27eSBarry Smith PetscMPIInt rank_ijk_re, rank_reI[3]; 5271e07b27eSBarry Smith PetscInt s0_re; 528c6a0d831SBarry Smith PetscInt ii, jj, kk, local_ijk_re, mapped_ijk; 5291e07b27eSBarry Smith PetscInt lenI_re[3]; 5301e07b27eSBarry Smith 5311e07b27eSBarry Smith location = (i - startI[0]) + (j - startI[1]) * lenI[0] + (k - startI[2]) * lenI[0] * lenI[1]; 5329371c9d4SSatish Balay PetscCall(_DMDADetermineRankFromGlobalIJK(3, i, j, k, ctx->Mp_re, ctx->Np_re, ctx->Pp_re, ctx->start_i_re, ctx->start_j_re, ctx->start_k_re, ctx->range_i_re, ctx->range_j_re, ctx->range_k_re, &rank_reI[0], &rank_reI[1], &rank_reI[2], &rank_ijk_re)); 5339566063dSJacob Faibussowitsch PetscCall(_DMDADetermineGlobalS0(3, rank_ijk_re, ctx->Mp_re, ctx->Np_re, ctx->Pp_re, ctx->range_i_re, ctx->range_j_re, ctx->range_k_re, &s0_re)); 5341e07b27eSBarry Smith ii = i - ctx->start_i_re[rank_reI[0]]; 53508401ef6SPierre Jolivet PetscCheck(ii >= 0, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmdarepart-perm3d] index error ii"); 5361e07b27eSBarry Smith jj = j - ctx->start_j_re[rank_reI[1]]; 53708401ef6SPierre Jolivet PetscCheck(jj >= 0, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmdarepart-perm3d] index error jj"); 5381e07b27eSBarry Smith kk = k - ctx->start_k_re[rank_reI[2]]; 53908401ef6SPierre Jolivet PetscCheck(kk >= 0, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmdarepart-perm3d] index error kk"); 5401e07b27eSBarry Smith lenI_re[0] = ctx->range_i_re[rank_reI[0]]; 5411e07b27eSBarry Smith lenI_re[1] = ctx->range_j_re[rank_reI[1]]; 5421e07b27eSBarry Smith lenI_re[2] = ctx->range_k_re[rank_reI[2]]; 5431e07b27eSBarry Smith local_ijk_re = ii + jj * lenI_re[0] + kk * lenI_re[0] * lenI_re[1]; 5441e07b27eSBarry Smith mapped_ijk = s0_re + local_ijk_re; 5459566063dSJacob Faibussowitsch PetscCall(MatSetValue(Pscalar, sr + location, mapped_ijk, 1.0, INSERT_VALUES)); 5461e07b27eSBarry Smith } 5471e07b27eSBarry Smith } 5481e07b27eSBarry Smith } 5499566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(Pscalar, MAT_FINAL_ASSEMBLY)); 5509566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(Pscalar, MAT_FINAL_ASSEMBLY)); 5519566063dSJacob Faibussowitsch PetscCall(MatCreateMAIJ(Pscalar, ndof, &P)); 5529566063dSJacob Faibussowitsch PetscCall(MatDestroy(&Pscalar)); 5531e07b27eSBarry Smith ctx->permutation = P; 5541e07b27eSBarry Smith PetscFunctionReturn(0); 5551e07b27eSBarry Smith } 5561e07b27eSBarry Smith 557*d71ae5a4SJacob Faibussowitsch PetscErrorCode PCTelescopeSetUp_dmda_permutation_2d(PC pc, PC_Telescope sred, PC_Telescope_DMDACtx *ctx) 558*d71ae5a4SJacob Faibussowitsch { 5591e07b27eSBarry Smith DM dm; 5601e07b27eSBarry Smith MPI_Comm comm; 5611e07b27eSBarry Smith Mat Pscalar, P; 5621e07b27eSBarry Smith PetscInt ndof; 5631e07b27eSBarry Smith PetscInt i, j, location, startI[2], endI[2], lenI[2], nx, ny, nz; 5641e07b27eSBarry Smith PetscInt sr, er, Mr; 5651e07b27eSBarry Smith Vec V; 5661e07b27eSBarry Smith 5671e07b27eSBarry Smith PetscFunctionBegin; 5689566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: setting up the permutation matrix (DMDA-2D)\n")); 5699566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)pc, &comm)); 5709566063dSJacob Faibussowitsch PetscCall(PCGetDM(pc, &dm)); 5719566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, NULL, &nx, &ny, &nz, NULL, NULL, NULL, &ndof, NULL, NULL, NULL, NULL, NULL)); 5729566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(dm, &V)); 5739566063dSJacob Faibussowitsch PetscCall(VecGetSize(V, &Mr)); 5749566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(V, &sr, &er)); 5759566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(dm, &V)); 5761e07b27eSBarry Smith sr = sr / ndof; 5771e07b27eSBarry Smith er = er / ndof; 5781e07b27eSBarry Smith Mr = Mr / ndof; 5791e07b27eSBarry Smith 5809566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &Pscalar)); 5819566063dSJacob Faibussowitsch PetscCall(MatSetSizes(Pscalar, (er - sr), (er - sr), Mr, Mr)); 5829566063dSJacob Faibussowitsch PetscCall(MatSetType(Pscalar, MATAIJ)); 5839566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation(Pscalar, 1, NULL)); 5849566063dSJacob Faibussowitsch PetscCall(MatMPIAIJSetPreallocation(Pscalar, 1, NULL, 1, NULL)); 5851e07b27eSBarry Smith 5869566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(dm, NULL, NULL, NULL, &lenI[0], &lenI[1], NULL)); 5879566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(dm, &startI[0], &startI[1], NULL, &endI[0], &endI[1], NULL)); 5881e07b27eSBarry Smith endI[0] += startI[0]; 5891e07b27eSBarry Smith endI[1] += startI[1]; 5901e07b27eSBarry Smith 5911e07b27eSBarry Smith for (j = startI[1]; j < endI[1]; j++) { 5921e07b27eSBarry Smith for (i = startI[0]; i < endI[0]; i++) { 5931e07b27eSBarry Smith PetscMPIInt rank_ijk_re, rank_reI[3]; 5941e07b27eSBarry Smith PetscInt s0_re; 595c6a0d831SBarry Smith PetscInt ii, jj, local_ijk_re, mapped_ijk; 5961e07b27eSBarry Smith PetscInt lenI_re[3]; 5971e07b27eSBarry Smith 5981e07b27eSBarry Smith location = (i - startI[0]) + (j - startI[1]) * lenI[0]; 5999371c9d4SSatish Balay PetscCall(_DMDADetermineRankFromGlobalIJK(2, i, j, 0, ctx->Mp_re, ctx->Np_re, ctx->Pp_re, ctx->start_i_re, ctx->start_j_re, ctx->start_k_re, ctx->range_i_re, ctx->range_j_re, ctx->range_k_re, &rank_reI[0], &rank_reI[1], NULL, &rank_ijk_re)); 6001e07b27eSBarry Smith 6019566063dSJacob Faibussowitsch PetscCall(_DMDADetermineGlobalS0(2, rank_ijk_re, ctx->Mp_re, ctx->Np_re, ctx->Pp_re, ctx->range_i_re, ctx->range_j_re, ctx->range_k_re, &s0_re)); 6021e07b27eSBarry Smith 6031e07b27eSBarry Smith ii = i - ctx->start_i_re[rank_reI[0]]; 60408401ef6SPierre Jolivet PetscCheck(ii >= 0, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmdarepart-perm2d] index error ii"); 6051e07b27eSBarry Smith jj = j - ctx->start_j_re[rank_reI[1]]; 60608401ef6SPierre Jolivet PetscCheck(jj >= 0, PETSC_COMM_SELF, PETSC_ERR_USER, "[dmdarepart-perm2d] index error jj"); 6071e07b27eSBarry Smith 6081e07b27eSBarry Smith lenI_re[0] = ctx->range_i_re[rank_reI[0]]; 6091e07b27eSBarry Smith lenI_re[1] = ctx->range_j_re[rank_reI[1]]; 6101e07b27eSBarry Smith local_ijk_re = ii + jj * lenI_re[0]; 6111e07b27eSBarry Smith mapped_ijk = s0_re + local_ijk_re; 6129566063dSJacob Faibussowitsch PetscCall(MatSetValue(Pscalar, sr + location, mapped_ijk, 1.0, INSERT_VALUES)); 6131e07b27eSBarry Smith } 6141e07b27eSBarry Smith } 6159566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(Pscalar, MAT_FINAL_ASSEMBLY)); 6169566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(Pscalar, MAT_FINAL_ASSEMBLY)); 6179566063dSJacob Faibussowitsch PetscCall(MatCreateMAIJ(Pscalar, ndof, &P)); 6189566063dSJacob Faibussowitsch PetscCall(MatDestroy(&Pscalar)); 6191e07b27eSBarry Smith ctx->permutation = P; 6201e07b27eSBarry Smith PetscFunctionReturn(0); 6211e07b27eSBarry Smith } 6221e07b27eSBarry Smith 623*d71ae5a4SJacob Faibussowitsch PetscErrorCode PCTelescopeSetUp_dmda_scatters(PC pc, PC_Telescope sred, PC_Telescope_DMDACtx *ctx) 624*d71ae5a4SJacob Faibussowitsch { 6251e07b27eSBarry Smith Vec xred, yred, xtmp, x, xp; 6261e07b27eSBarry Smith VecScatter scatter; 6271e07b27eSBarry Smith IS isin; 6281e07b27eSBarry Smith Mat B; 6291e07b27eSBarry Smith PetscInt m, bs, st, ed; 6301e07b27eSBarry Smith MPI_Comm comm; 6311e07b27eSBarry Smith 6321e07b27eSBarry Smith PetscFunctionBegin; 6339566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)pc, &comm)); 6349566063dSJacob Faibussowitsch PetscCall(PCGetOperators(pc, NULL, &B)); 6359566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(B, &x, NULL)); 6369566063dSJacob Faibussowitsch PetscCall(MatGetBlockSize(B, &bs)); 6379566063dSJacob Faibussowitsch PetscCall(VecDuplicate(x, &xp)); 6383ac26c5eSBarry Smith m = 0; 6391e07b27eSBarry Smith xred = NULL; 6401e07b27eSBarry Smith yred = NULL; 64157f12427SDave May if (PCTelescope_isActiveRank(sred)) { 6429566063dSJacob Faibussowitsch PetscCall(DMCreateGlobalVector(ctx->dmrepart, &xred)); 6439566063dSJacob Faibussowitsch PetscCall(VecDuplicate(xred, &yred)); 6449566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(xred, &st, &ed)); 6459566063dSJacob Faibussowitsch PetscCall(ISCreateStride(comm, ed - st, st, 1, &isin)); 6469566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(xred, &m)); 6471e07b27eSBarry Smith } else { 6489566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(x, &st, &ed)); 6499566063dSJacob Faibussowitsch PetscCall(ISCreateStride(comm, 0, st, 1, &isin)); 6501e07b27eSBarry Smith } 6519566063dSJacob Faibussowitsch PetscCall(ISSetBlockSize(isin, bs)); 6529566063dSJacob Faibussowitsch PetscCall(VecCreate(comm, &xtmp)); 6539566063dSJacob Faibussowitsch PetscCall(VecSetSizes(xtmp, m, PETSC_DECIDE)); 6549566063dSJacob Faibussowitsch PetscCall(VecSetBlockSize(xtmp, bs)); 6559566063dSJacob Faibussowitsch PetscCall(VecSetType(xtmp, ((PetscObject)x)->type_name)); 6569566063dSJacob Faibussowitsch PetscCall(VecScatterCreate(x, isin, xtmp, NULL, &scatter)); 6571e07b27eSBarry Smith sred->xred = xred; 6581e07b27eSBarry Smith sred->yred = yred; 6591e07b27eSBarry Smith sred->isin = isin; 6601e07b27eSBarry Smith sred->scatter = scatter; 6611e07b27eSBarry Smith sred->xtmp = xtmp; 6621e07b27eSBarry Smith 6631e07b27eSBarry Smith ctx->xp = xp; 6649566063dSJacob Faibussowitsch PetscCall(VecDestroy(&x)); 6651e07b27eSBarry Smith PetscFunctionReturn(0); 6661e07b27eSBarry Smith } 6671e07b27eSBarry Smith 668*d71ae5a4SJacob Faibussowitsch PetscErrorCode PCTelescopeSetUp_dmda(PC pc, PC_Telescope sred) 669*d71ae5a4SJacob Faibussowitsch { 6701e07b27eSBarry Smith PC_Telescope_DMDACtx *ctx; 6711e07b27eSBarry Smith PetscInt dim; 6721e07b27eSBarry Smith DM dm; 6731e07b27eSBarry Smith MPI_Comm comm; 6741e07b27eSBarry Smith 6751e07b27eSBarry Smith PetscFunctionBegin; 6769566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: setup (DMDA)\n")); 6779566063dSJacob Faibussowitsch PetscCall(PetscNew(&ctx)); 6781e07b27eSBarry Smith sred->dm_ctx = (void *)ctx; 6791e07b27eSBarry Smith 6809566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)pc, &comm)); 6819566063dSJacob Faibussowitsch PetscCall(PCGetDM(pc, &dm)); 6829566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, &dim, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL)); 6831e07b27eSBarry Smith 6841e07b27eSBarry Smith PCTelescopeSetUp_dmda_repart(pc, sred, ctx); 6851e07b27eSBarry Smith PCTelescopeSetUp_dmda_repart_coors(pc, sred, ctx); 6861e07b27eSBarry Smith switch (dim) { 687*d71ae5a4SJacob Faibussowitsch case 1: 688*d71ae5a4SJacob Faibussowitsch SETERRQ(comm, PETSC_ERR_SUP, "Telescope: DMDA (1D) repartitioning not provided"); 689*d71ae5a4SJacob Faibussowitsch case 2: 690*d71ae5a4SJacob Faibussowitsch PetscCall(PCTelescopeSetUp_dmda_permutation_2d(pc, sred, ctx)); 691*d71ae5a4SJacob Faibussowitsch break; 692*d71ae5a4SJacob Faibussowitsch case 3: 693*d71ae5a4SJacob Faibussowitsch PetscCall(PCTelescopeSetUp_dmda_permutation_3d(pc, sred, ctx)); 694*d71ae5a4SJacob Faibussowitsch break; 6951e07b27eSBarry Smith } 6969566063dSJacob Faibussowitsch PetscCall(PCTelescopeSetUp_dmda_scatters(pc, sred, ctx)); 6971e07b27eSBarry Smith PetscFunctionReturn(0); 6981e07b27eSBarry Smith } 6991e07b27eSBarry Smith 700*d71ae5a4SJacob Faibussowitsch PetscErrorCode PCTelescopeMatCreate_dmda_dmactivefalse(PC pc, PC_Telescope sred, MatReuse reuse, Mat *A) 701*d71ae5a4SJacob Faibussowitsch { 7021e07b27eSBarry Smith PC_Telescope_DMDACtx *ctx; 7031e07b27eSBarry Smith MPI_Comm comm, subcomm; 7041e07b27eSBarry Smith Mat Bperm, Bred, B, P; 7051e07b27eSBarry Smith PetscInt nr, nc; 7061e07b27eSBarry Smith IS isrow, iscol; 7071e07b27eSBarry Smith Mat Blocal, *_Blocal; 7081e07b27eSBarry Smith 7091e07b27eSBarry Smith PetscFunctionBegin; 7109566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: updating the redundant preconditioned operator (DMDA)\n")); 7119566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)pc, &comm)); 7121e07b27eSBarry Smith subcomm = PetscSubcommChild(sred->psubcomm); 7131e07b27eSBarry Smith ctx = (PC_Telescope_DMDACtx *)sred->dm_ctx; 7141e07b27eSBarry Smith 7159566063dSJacob Faibussowitsch PetscCall(PCGetOperators(pc, NULL, &B)); 7169566063dSJacob Faibussowitsch PetscCall(MatGetSize(B, &nr, &nc)); 7171e07b27eSBarry Smith 7181e07b27eSBarry Smith P = ctx->permutation; 7199566063dSJacob Faibussowitsch PetscCall(MatPtAP(B, P, MAT_INITIAL_MATRIX, 1.1, &Bperm)); 7201e07b27eSBarry Smith 7211e07b27eSBarry Smith /* Get submatrices */ 7221e07b27eSBarry Smith isrow = sred->isin; 7239566063dSJacob Faibussowitsch PetscCall(ISCreateStride(comm, nc, 0, 1, &iscol)); 7241e07b27eSBarry Smith 7259566063dSJacob Faibussowitsch PetscCall(MatCreateSubMatrices(Bperm, 1, &isrow, &iscol, MAT_INITIAL_MATRIX, &_Blocal)); 7261e07b27eSBarry Smith Blocal = *_Blocal; 7271e07b27eSBarry Smith Bred = NULL; 72857f12427SDave May if (PCTelescope_isActiveRank(sred)) { 7291e07b27eSBarry Smith PetscInt mm; 7301e07b27eSBarry Smith 731ad540459SPierre Jolivet if (reuse != MAT_INITIAL_MATRIX) Bred = *A; 7329566063dSJacob Faibussowitsch PetscCall(MatGetSize(Blocal, &mm, NULL)); 7339566063dSJacob Faibussowitsch /* PetscCall(MatCreateMPIMatConcatenateSeqMat(subcomm,Blocal,PETSC_DECIDE,reuse,&Bred)); */ 7349566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(subcomm, Blocal, mm, reuse, &Bred)); 7351e07b27eSBarry Smith } 7361e07b27eSBarry Smith *A = Bred; 7371e07b27eSBarry Smith 7389566063dSJacob Faibussowitsch PetscCall(ISDestroy(&iscol)); 7399566063dSJacob Faibussowitsch PetscCall(MatDestroy(&Bperm)); 7409566063dSJacob Faibussowitsch PetscCall(MatDestroyMatrices(1, &_Blocal)); 7411e07b27eSBarry Smith PetscFunctionReturn(0); 7421e07b27eSBarry Smith } 7431e07b27eSBarry Smith 744*d71ae5a4SJacob Faibussowitsch PetscErrorCode PCTelescopeMatCreate_dmda(PC pc, PC_Telescope sred, MatReuse reuse, Mat *A) 745*d71ae5a4SJacob Faibussowitsch { 746ba1c3560SDave May DM dm; 747ba1c3560SDave May PetscErrorCode (*dmksp_func)(KSP, Mat, Mat, void *); 748ba1c3560SDave May void *dmksp_ctx; 749ba1c3560SDave May 750ba1c3560SDave May PetscFunctionBegin; 7519566063dSJacob Faibussowitsch PetscCall(PCGetDM(pc, &dm)); 7529566063dSJacob Faibussowitsch PetscCall(DMKSPGetComputeOperators(dm, &dmksp_func, &dmksp_ctx)); 753dc9ee9fdSDave May /* We assume that dmksp_func = NULL, is equivalent to dmActive = PETSC_FALSE */ 7547c5279cbSDave May if (dmksp_func && !sred->ignore_kspcomputeoperators) { 755ba1c3560SDave May DM dmrepart; 75628323a89SDave May Mat Ak; 757ba1c3560SDave May 758ba1c3560SDave May *A = NULL; 75957f12427SDave May if (PCTelescope_isActiveRank(sred)) { 7609566063dSJacob Faibussowitsch PetscCall(KSPGetDM(sred->ksp, &dmrepart)); 761ba1c3560SDave May if (reuse == MAT_INITIAL_MATRIX) { 7629566063dSJacob Faibussowitsch PetscCall(DMCreateMatrix(dmrepart, &Ak)); 763ba1c3560SDave May *A = Ak; 764ba1c3560SDave May } else if (reuse == MAT_REUSE_MATRIX) { 765ba1c3560SDave May Ak = *A; 766ba1c3560SDave May } 7675c5dbb1cSDave May /* 7685c5dbb1cSDave May There is no need to explicitly assemble the operator now, 7695c5dbb1cSDave May the sub-KSP will call the method provided to KSPSetComputeOperators() during KSPSetUp() 7705c5dbb1cSDave May */ 771ba1c3560SDave May } 772ba1c3560SDave May } else { 7739566063dSJacob Faibussowitsch PetscCall(PCTelescopeMatCreate_dmda_dmactivefalse(pc, sred, reuse, A)); 774ba1c3560SDave May } 775ba1c3560SDave May PetscFunctionReturn(0); 776ba1c3560SDave May } 777ba1c3560SDave May 778*d71ae5a4SJacob Faibussowitsch PetscErrorCode PCTelescopeSubNullSpaceCreate_dmda_Telescope(PC pc, PC_Telescope sred, MatNullSpace nullspace, MatNullSpace *sub_nullspace) 779*d71ae5a4SJacob Faibussowitsch { 7801e07b27eSBarry Smith PetscBool has_const; 781a947c41eSDave May PetscInt i, k, n = 0; 7821e07b27eSBarry Smith const Vec *vecs; 783c41e779fSDave May Vec *sub_vecs = NULL; 7841e07b27eSBarry Smith MPI_Comm subcomm; 7851e07b27eSBarry Smith PC_Telescope_DMDACtx *ctx; 7861e07b27eSBarry Smith 7871e07b27eSBarry Smith PetscFunctionBegin; 7881e07b27eSBarry Smith ctx = (PC_Telescope_DMDACtx *)sred->dm_ctx; 7891e07b27eSBarry Smith subcomm = PetscSubcommChild(sred->psubcomm); 7909566063dSJacob Faibussowitsch PetscCall(MatNullSpaceGetVecs(nullspace, &has_const, &n, &vecs)); 7911e07b27eSBarry Smith 79257f12427SDave May if (PCTelescope_isActiveRank(sred)) { 7931e07b27eSBarry Smith /* create new vectors */ 79448a46eb9SPierre Jolivet if (n) PetscCall(VecDuplicateVecs(sred->xred, n, &sub_vecs)); 7951e07b27eSBarry Smith } 7961e07b27eSBarry Smith 7971e07b27eSBarry Smith /* copy entries */ 7981e07b27eSBarry Smith for (k = 0; k < n; k++) { 7991e07b27eSBarry Smith const PetscScalar *x_array; 8001e07b27eSBarry Smith PetscScalar *LA_sub_vec; 80113c30530SDave May PetscInt st, ed; 8021e07b27eSBarry Smith 8031e07b27eSBarry Smith /* permute vector into ordering associated with re-partitioned dmda */ 8049566063dSJacob Faibussowitsch PetscCall(MatMultTranspose(ctx->permutation, vecs[k], ctx->xp)); 8051e07b27eSBarry Smith 8061e07b27eSBarry Smith /* pull in vector x->xtmp */ 8079566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(sred->scatter, ctx->xp, sred->xtmp, INSERT_VALUES, SCATTER_FORWARD)); 8089566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(sred->scatter, ctx->xp, sred->xtmp, INSERT_VALUES, SCATTER_FORWARD)); 8091e07b27eSBarry Smith 810392968a1SPatrick Sanan /* copy vector entries into xred */ 8119566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(sred->xtmp, &x_array)); 812ea2b237eSDave May if (sub_vecs) { 813ea2b237eSDave May if (sub_vecs[k]) { 8149566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(sub_vecs[k], &st, &ed)); 8159566063dSJacob Faibussowitsch PetscCall(VecGetArray(sub_vecs[k], &LA_sub_vec)); 816ad540459SPierre Jolivet for (i = 0; i < ed - st; i++) LA_sub_vec[i] = x_array[i]; 8179566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(sub_vecs[k], &LA_sub_vec)); 8181e07b27eSBarry Smith } 819ea2b237eSDave May } 8209566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(sred->xtmp, &x_array)); 8211e07b27eSBarry Smith } 8221e07b27eSBarry Smith 82357f12427SDave May if (PCTelescope_isActiveRank(sred)) { 824d8b9d5b7SPatrick Sanan /* create new (near) nullspace for redundant object */ 8259566063dSJacob Faibussowitsch PetscCall(MatNullSpaceCreate(subcomm, has_const, n, sub_vecs, sub_nullspace)); 8269566063dSJacob Faibussowitsch PetscCall(VecDestroyVecs(n, &sub_vecs)); 82728b400f6SJacob Faibussowitsch PetscCheck(!nullspace->remove, PetscObjectComm((PetscObject)pc), PETSC_ERR_SUP, "Propagation of custom remove callbacks not supported when propagating (near) nullspaces with PCTelescope"); 82828b400f6SJacob Faibussowitsch PetscCheck(!nullspace->rmctx, PetscObjectComm((PetscObject)pc), PETSC_ERR_SUP, "Propagation of custom remove callback context not supported when propagating (near) nullspaces with PCTelescope"); 829d8b9d5b7SPatrick Sanan } 830392968a1SPatrick Sanan PetscFunctionReturn(0); 831392968a1SPatrick Sanan } 832392968a1SPatrick Sanan 833*d71ae5a4SJacob Faibussowitsch PetscErrorCode PCTelescopeMatNullSpaceCreate_dmda(PC pc, PC_Telescope sred, Mat sub_mat) 834*d71ae5a4SJacob Faibussowitsch { 835392968a1SPatrick Sanan Mat B; 836392968a1SPatrick Sanan 837392968a1SPatrick Sanan PetscFunctionBegin; 8389566063dSJacob Faibussowitsch PetscCall(PCGetOperators(pc, NULL, &B)); 839392968a1SPatrick Sanan { 840392968a1SPatrick Sanan MatNullSpace nullspace, sub_nullspace; 8419566063dSJacob Faibussowitsch PetscCall(MatGetNullSpace(B, &nullspace)); 842392968a1SPatrick Sanan if (nullspace) { 8439566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: generating nullspace (DMDA)\n")); 8449566063dSJacob Faibussowitsch PetscCall(PCTelescopeSubNullSpaceCreate_dmda_Telescope(pc, sred, nullspace, &sub_nullspace)); 84557f12427SDave May if (PCTelescope_isActiveRank(sred)) { 8469566063dSJacob Faibussowitsch PetscCall(MatSetNullSpace(sub_mat, sub_nullspace)); 8479566063dSJacob Faibussowitsch PetscCall(MatNullSpaceDestroy(&sub_nullspace)); 8481e07b27eSBarry Smith } 849392968a1SPatrick Sanan } 850392968a1SPatrick Sanan } 851392968a1SPatrick Sanan { 852392968a1SPatrick Sanan MatNullSpace nearnullspace, sub_nearnullspace; 8539566063dSJacob Faibussowitsch PetscCall(MatGetNearNullSpace(B, &nearnullspace)); 854392968a1SPatrick Sanan if (nearnullspace) { 8559566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescope: generating near nullspace (DMDA)\n")); 8569566063dSJacob Faibussowitsch PetscCall(PCTelescopeSubNullSpaceCreate_dmda_Telescope(pc, sred, nearnullspace, &sub_nearnullspace)); 85757f12427SDave May if (PCTelescope_isActiveRank(sred)) { 8589566063dSJacob Faibussowitsch PetscCall(MatSetNearNullSpace(sub_mat, sub_nearnullspace)); 8599566063dSJacob Faibussowitsch PetscCall(MatNullSpaceDestroy(&sub_nearnullspace)); 860392968a1SPatrick Sanan } 861392968a1SPatrick Sanan } 862392968a1SPatrick Sanan } 8631e07b27eSBarry Smith PetscFunctionReturn(0); 8641e07b27eSBarry Smith } 8651e07b27eSBarry Smith 866*d71ae5a4SJacob Faibussowitsch PetscErrorCode PCApply_Telescope_dmda(PC pc, Vec x, Vec y) 867*d71ae5a4SJacob Faibussowitsch { 8681e07b27eSBarry Smith PC_Telescope sred = (PC_Telescope)pc->data; 8691e07b27eSBarry Smith Mat perm; 8701e07b27eSBarry Smith Vec xtmp, xp, xred, yred; 87113c30530SDave May PetscInt i, st, ed; 8721e07b27eSBarry Smith VecScatter scatter; 8731e07b27eSBarry Smith PetscScalar *array; 8741e07b27eSBarry Smith const PetscScalar *x_array; 8751e07b27eSBarry Smith PC_Telescope_DMDACtx *ctx; 8761e07b27eSBarry Smith 8771e07b27eSBarry Smith ctx = (PC_Telescope_DMDACtx *)sred->dm_ctx; 8781e07b27eSBarry Smith xtmp = sred->xtmp; 8791e07b27eSBarry Smith scatter = sred->scatter; 8801e07b27eSBarry Smith xred = sred->xred; 8811e07b27eSBarry Smith yred = sred->yred; 8821e07b27eSBarry Smith perm = ctx->permutation; 8831e07b27eSBarry Smith xp = ctx->xp; 8841e07b27eSBarry Smith 8851e07b27eSBarry Smith PetscFunctionBegin; 8869566063dSJacob Faibussowitsch PetscCall(PetscCitationsRegister(citation, &cited)); 88714c9fce5SDave May 8881e07b27eSBarry Smith /* permute vector into ordering associated with re-partitioned dmda */ 8899566063dSJacob Faibussowitsch PetscCall(MatMultTranspose(perm, x, xp)); 8901e07b27eSBarry Smith 8911e07b27eSBarry Smith /* pull in vector x->xtmp */ 8929566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(scatter, xp, xtmp, INSERT_VALUES, SCATTER_FORWARD)); 8939566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(scatter, xp, xtmp, INSERT_VALUES, SCATTER_FORWARD)); 8941e07b27eSBarry Smith 895a5b23f4aSJose E. Roman /* copy vector entries into xred */ 8969566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(xtmp, &x_array)); 8971e07b27eSBarry Smith if (xred) { 8981e07b27eSBarry Smith PetscScalar *LA_xred; 8999566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(xred, &st, &ed)); 9001e07b27eSBarry Smith 9019566063dSJacob Faibussowitsch PetscCall(VecGetArray(xred, &LA_xred)); 902ad540459SPierre Jolivet for (i = 0; i < ed - st; i++) LA_xred[i] = x_array[i]; 9039566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(xred, &LA_xred)); 9041e07b27eSBarry Smith } 9059566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(xtmp, &x_array)); 9061e07b27eSBarry Smith 9071e07b27eSBarry Smith /* solve */ 90857f12427SDave May if (PCTelescope_isActiveRank(sred)) { 9099566063dSJacob Faibussowitsch PetscCall(KSPSolve(sred->ksp, xred, yred)); 9109566063dSJacob Faibussowitsch PetscCall(KSPCheckSolve(sred->ksp, pc, yred)); 9111e07b27eSBarry Smith } 9121e07b27eSBarry Smith 9131e07b27eSBarry Smith /* return vector */ 9149566063dSJacob Faibussowitsch PetscCall(VecGetArray(xtmp, &array)); 9151e07b27eSBarry Smith if (yred) { 9161e07b27eSBarry Smith const PetscScalar *LA_yred; 9179566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(yred, &st, &ed)); 9189566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(yred, &LA_yred)); 919ad540459SPierre Jolivet for (i = 0; i < ed - st; i++) array[i] = LA_yred[i]; 9209566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(yred, &LA_yred)); 9211e07b27eSBarry Smith } 9229566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(xtmp, &array)); 9239566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(scatter, xtmp, xp, INSERT_VALUES, SCATTER_REVERSE)); 9249566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(scatter, xtmp, xp, INSERT_VALUES, SCATTER_REVERSE)); 9259566063dSJacob Faibussowitsch PetscCall(MatMult(perm, xp, y)); 9261e07b27eSBarry Smith PetscFunctionReturn(0); 9271e07b27eSBarry Smith } 9281e07b27eSBarry Smith 929*d71ae5a4SJacob Faibussowitsch PetscErrorCode PCApplyRichardson_Telescope_dmda(PC pc, Vec x, Vec y, Vec w, PetscReal rtol, PetscReal abstol, PetscReal dtol, PetscInt its, PetscBool zeroguess, PetscInt *outits, PCRichardsonConvergedReason *reason) 930*d71ae5a4SJacob Faibussowitsch { 931f650675bSDave May PC_Telescope sred = (PC_Telescope)pc->data; 932f650675bSDave May Mat perm; 933a1d91a28SDave May Vec xtmp, xp, yred; 934f650675bSDave May PetscInt i, st, ed; 935f650675bSDave May VecScatter scatter; 936f650675bSDave May const PetscScalar *x_array; 937c41e779fSDave May PetscBool default_init_guess_value = PETSC_FALSE; 938f650675bSDave May PC_Telescope_DMDACtx *ctx; 939f650675bSDave May 94057f12427SDave May PetscFunctionBegin; 941f650675bSDave May ctx = (PC_Telescope_DMDACtx *)sred->dm_ctx; 942f650675bSDave May xtmp = sred->xtmp; 943f650675bSDave May scatter = sred->scatter; 944f650675bSDave May yred = sred->yred; 945f650675bSDave May perm = ctx->permutation; 946f650675bSDave May xp = ctx->xp; 947f650675bSDave May 94808401ef6SPierre Jolivet PetscCheck(its <= 1, PetscObjectComm((PetscObject)pc), PETSC_ERR_SUP, "PCApplyRichardson_Telescope_dmda only supports max_it = 1"); 949f650675bSDave May *reason = (PCRichardsonConvergedReason)0; 950f650675bSDave May 951f650675bSDave May if (!zeroguess) { 9529566063dSJacob Faibussowitsch PetscCall(PetscInfo(pc, "PCTelescopeDMDA: Scattering y for non-zero-initial guess\n")); 953f650675bSDave May /* permute vector into ordering associated with re-partitioned dmda */ 9549566063dSJacob Faibussowitsch PetscCall(MatMultTranspose(perm, y, xp)); 955f650675bSDave May 956f650675bSDave May /* pull in vector x->xtmp */ 9579566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(scatter, xp, xtmp, INSERT_VALUES, SCATTER_FORWARD)); 9589566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(scatter, xp, xtmp, INSERT_VALUES, SCATTER_FORWARD)); 959f650675bSDave May 960a5b23f4aSJose E. Roman /* copy vector entries into xred */ 9619566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(xtmp, &x_array)); 962f650675bSDave May if (yred) { 963f650675bSDave May PetscScalar *LA_yred; 9649566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(yred, &st, &ed)); 9659566063dSJacob Faibussowitsch PetscCall(VecGetArray(yred, &LA_yred)); 966ad540459SPierre Jolivet for (i = 0; i < ed - st; i++) LA_yred[i] = x_array[i]; 9679566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(yred, &LA_yred)); 968f650675bSDave May } 9699566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(xtmp, &x_array)); 970f650675bSDave May } 971f650675bSDave May 97257f12427SDave May if (PCTelescope_isActiveRank(sred)) { 9739566063dSJacob Faibussowitsch PetscCall(KSPGetInitialGuessNonzero(sred->ksp, &default_init_guess_value)); 9749566063dSJacob Faibussowitsch if (!zeroguess) PetscCall(KSPSetInitialGuessNonzero(sred->ksp, PETSC_TRUE)); 975f650675bSDave May } 976f650675bSDave May 9779566063dSJacob Faibussowitsch PetscCall(PCApply_Telescope_dmda(pc, x, y)); 978f650675bSDave May 97948a46eb9SPierre Jolivet if (PCTelescope_isActiveRank(sred)) PetscCall(KSPSetInitialGuessNonzero(sred->ksp, default_init_guess_value)); 980f650675bSDave May 981f650675bSDave May if (!*reason) *reason = PCRICHARDSON_CONVERGED_ITS; 982f650675bSDave May *outits = 1; 983f650675bSDave May PetscFunctionReturn(0); 984f650675bSDave May } 985f650675bSDave May 986*d71ae5a4SJacob Faibussowitsch PetscErrorCode PCReset_Telescope_dmda(PC pc) 987*d71ae5a4SJacob Faibussowitsch { 9881e07b27eSBarry Smith PC_Telescope sred = (PC_Telescope)pc->data; 9891e07b27eSBarry Smith PC_Telescope_DMDACtx *ctx; 9901e07b27eSBarry Smith 9911e07b27eSBarry Smith PetscFunctionBegin; 9921e07b27eSBarry Smith ctx = (PC_Telescope_DMDACtx *)sred->dm_ctx; 9939566063dSJacob Faibussowitsch PetscCall(VecDestroy(&ctx->xp)); 9949566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ctx->permutation)); 9959566063dSJacob Faibussowitsch PetscCall(DMDestroy(&ctx->dmrepart)); 9969566063dSJacob Faibussowitsch PetscCall(PetscFree3(ctx->range_i_re, ctx->range_j_re, ctx->range_k_re)); 9979566063dSJacob Faibussowitsch PetscCall(PetscFree3(ctx->start_i_re, ctx->start_j_re, ctx->start_k_re)); 9981e07b27eSBarry Smith PetscFunctionReturn(0); 9991e07b27eSBarry Smith } 10001e07b27eSBarry Smith 1001*d71ae5a4SJacob Faibussowitsch PetscErrorCode DMView_DA_Short_3d(DM dm, PetscViewer v) 1002*d71ae5a4SJacob Faibussowitsch { 10031e07b27eSBarry Smith PetscInt M, N, P, m, n, p, ndof, nsw; 10041e07b27eSBarry Smith MPI_Comm comm; 10051e07b27eSBarry Smith PetscMPIInt size; 10061e07b27eSBarry Smith const char *prefix; 10071e07b27eSBarry Smith 10081e07b27eSBarry Smith PetscFunctionBegin; 10099566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)dm, &comm)); 10109566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 10119566063dSJacob Faibussowitsch PetscCall(DMGetOptionsPrefix(dm, &prefix)); 10129566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, NULL, &M, &N, &P, &m, &n, &p, &ndof, &nsw, NULL, NULL, NULL, NULL)); 10139566063dSJacob Faibussowitsch if (prefix) PetscCall(PetscViewerASCIIPrintf(v, "DMDA Object: (%s) %d MPI processes\n", prefix, size)); 10149566063dSJacob Faibussowitsch else PetscCall(PetscViewerASCIIPrintf(v, "DMDA Object: %d MPI processes\n", size)); 101563a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(v, " M %" PetscInt_FMT " N %" PetscInt_FMT " P %" PetscInt_FMT " m %" PetscInt_FMT " n %" PetscInt_FMT " p %" PetscInt_FMT " dof %" PetscInt_FMT " overlap %" PetscInt_FMT "\n", M, N, P, m, n, p, ndof, nsw)); 10161e07b27eSBarry Smith PetscFunctionReturn(0); 10171e07b27eSBarry Smith } 10181e07b27eSBarry Smith 1019*d71ae5a4SJacob Faibussowitsch PetscErrorCode DMView_DA_Short_2d(DM dm, PetscViewer v) 1020*d71ae5a4SJacob Faibussowitsch { 10211e07b27eSBarry Smith PetscInt M, N, m, n, ndof, nsw; 10221e07b27eSBarry Smith MPI_Comm comm; 10231e07b27eSBarry Smith PetscMPIInt size; 10241e07b27eSBarry Smith const char *prefix; 10251e07b27eSBarry Smith 10261e07b27eSBarry Smith PetscFunctionBegin; 10279566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)dm, &comm)); 10289566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 10299566063dSJacob Faibussowitsch PetscCall(DMGetOptionsPrefix(dm, &prefix)); 10309566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, NULL, &M, &N, NULL, &m, &n, NULL, &ndof, &nsw, NULL, NULL, NULL, NULL)); 10319566063dSJacob Faibussowitsch if (prefix) PetscCall(PetscViewerASCIIPrintf(v, "DMDA Object: (%s) %d MPI processes\n", prefix, size)); 10329566063dSJacob Faibussowitsch else PetscCall(PetscViewerASCIIPrintf(v, "DMDA Object: %d MPI processes\n", size)); 103363a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(v, " M %" PetscInt_FMT " N %" PetscInt_FMT " m %" PetscInt_FMT " n %" PetscInt_FMT " dof %" PetscInt_FMT " overlap %" PetscInt_FMT "\n", M, N, m, n, ndof, nsw)); 10341e07b27eSBarry Smith PetscFunctionReturn(0); 10351e07b27eSBarry Smith } 10361e07b27eSBarry Smith 1037*d71ae5a4SJacob Faibussowitsch PetscErrorCode DMView_DA_Short(DM dm, PetscViewer v) 1038*d71ae5a4SJacob Faibussowitsch { 10391e07b27eSBarry Smith PetscInt dim; 10401e07b27eSBarry Smith 10411e07b27eSBarry Smith PetscFunctionBegin; 10429566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(dm, &dim, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL)); 10431e07b27eSBarry Smith switch (dim) { 1044*d71ae5a4SJacob Faibussowitsch case 2: 1045*d71ae5a4SJacob Faibussowitsch PetscCall(DMView_DA_Short_2d(dm, v)); 1046*d71ae5a4SJacob Faibussowitsch break; 1047*d71ae5a4SJacob Faibussowitsch case 3: 1048*d71ae5a4SJacob Faibussowitsch PetscCall(DMView_DA_Short_3d(dm, v)); 1049*d71ae5a4SJacob Faibussowitsch break; 10501e07b27eSBarry Smith } 10511e07b27eSBarry Smith PetscFunctionReturn(0); 10521e07b27eSBarry Smith } 1053