1 2 /*************************************xxt.c************************************ 3 Module Name: xxt 4 Module Info: 5 6 author: Henry M. Tufo III 7 e-mail: hmt@asci.uchicago.edu 8 contact: 9 +--------------------------------+--------------------------------+ 10 |MCS Division - Building 221 |Department of Computer Science | 11 |Argonne National Laboratory |Ryerson 152 | 12 |9700 S. Cass Avenue |The University of Chicago | 13 |Argonne, IL 60439 |Chicago, IL 60637 | 14 |(630) 252-5354/5986 ph/fx |(773) 702-6019/8487 ph/fx | 15 +--------------------------------+--------------------------------+ 16 17 Last Modification: 3.20.01 18 **************************************xxt.c***********************************/ 19 20 21 /*************************************xxt.c************************************ 22 NOTES ON USAGE: 23 24 **************************************xxt.c***********************************/ 25 #include <stdio.h> 26 #include <stdlib.h> 27 #include <limits.h> 28 #include <float.h> 29 #include <math.h> 30 #if defined NXSRC 31 #include <nx.h> 32 #elif defined MPISRC 33 #include <mpi.h> 34 #endif 35 36 #include "const.h" 37 #include "types.h" 38 #include "comm.h" 39 #include "error.h" 40 #include "ivec.h" 41 #include "bss_malloc.h" 42 #include "queue.h" 43 #include "gs.h" 44 #ifdef MLSRC 45 #include "ml_include.h" 46 #endif 47 #include "blas.h" 48 #include "xxt.h" 49 50 #define LEFT -1 51 #define RIGHT 1 52 #define BOTH 0 53 #define MAX_FORTRAN_HANDLES 10 54 55 typedef struct xxt_solver_info { 56 int n, m, n_global, m_global; 57 int nnz, max_nnz, msg_buf_sz; 58 int *nsep, *lnsep, *fo, nfo, *stages; 59 int *col_sz, *col_indices; 60 REAL **col_vals, *x, *solve_uu, *solve_w; 61 int nsolves; 62 REAL tot_solve_time; 63 } xxt_info; 64 65 typedef struct matvec_info { 66 int n, m, n_global, m_global; 67 int *local2global; 68 gs_ADT gs_handle; 69 PetscErrorCode (*matvec)(struct matvec_info*,REAL*,REAL*); 70 void *grid_data; 71 } mv_info; 72 73 struct xxt_CDT{ 74 int id; 75 int ns; 76 int level; 77 xxt_info *info; 78 mv_info *mvi; 79 }; 80 81 static int n_xxt=0; 82 static int n_xxt_handles=0; 83 84 /* prototypes */ 85 static void do_xxt_solve(xxt_ADT xxt_handle, REAL *rhs); 86 static void check_init(void); 87 static void check_handle(xxt_ADT xxt_handle); 88 static void det_separators(xxt_ADT xxt_handle); 89 static void do_matvec(mv_info *A, REAL *v, REAL *u); 90 static int xxt_generate(xxt_ADT xxt_handle); 91 static int do_xxt_factor(xxt_ADT xxt_handle); 92 static mv_info *set_mvi(int *local2global, int n, int m, void *matvec, void *grid_data); 93 #ifdef MLSRC 94 void ML_XXT_solve(xxt_ADT xxt_handle, int lx, double *x, int lb, double *b); 95 int ML_XXT_factor(xxt_ADT xxt_handle, int *local2global, int n, int m, 96 void *matvec, void *grid_data, int grid_tag, ML *my_ml); 97 #endif 98 99 100 /*************************************xxt.c************************************ 101 Function: XXT_new() 102 103 Input : 104 Output: 105 Return: 106 Description: 107 **************************************xxt.c***********************************/ 108 xxt_ADT 109 XXT_new(void) 110 { 111 xxt_ADT xxt_handle; 112 113 114 #ifdef DEBUG 115 error_msg_warning("XXT_new() :: start %d\n",n_xxt_handles); 116 #endif 117 118 /* rolling count on n_xxt ... pot. problem here */ 119 n_xxt_handles++; 120 xxt_handle = (xxt_ADT)bss_malloc(sizeof(struct xxt_CDT)); 121 xxt_handle->id = ++n_xxt; 122 xxt_handle->info = NULL; xxt_handle->mvi = NULL; 123 124 #ifdef DEBUG 125 error_msg_warning("XXT_new() :: end %d\n",n_xxt_handles); 126 #endif 127 128 return(xxt_handle); 129 } 130 131 132 /*************************************xxt.c************************************ 133 Function: XXT_factor() 134 135 Input : 136 Output: 137 Return: 138 Description: 139 **************************************xxt.c***********************************/ 140 int 141 XXT_factor(xxt_ADT xxt_handle, /* prev. allocated xxt handle */ 142 int *local2global, /* global column mapping */ 143 int n, /* local num rows */ 144 int m, /* local num cols */ 145 void *matvec, /* b_loc=A_local.x_loc */ 146 void *grid_data /* grid data for matvec */ 147 ) 148 { 149 #ifdef DEBUG 150 int flag; 151 152 153 error_msg_warning("XXT_factor() :: start %d\n",n_xxt_handles); 154 #endif 155 156 check_init(); 157 check_handle(xxt_handle); 158 159 /* only 2^k for now and all nodes participating */ 160 if ((1<<(xxt_handle->level=i_log2_num_nodes))!=num_nodes) 161 {error_msg_fatal("only 2^k for now and MPI_COMM_WORLD!!! %d != %d\n",1<<i_log2_num_nodes,num_nodes);} 162 163 /* space for X info */ 164 xxt_handle->info = (xxt_info*)bss_malloc(sizeof(xxt_info)); 165 166 /* set up matvec handles */ 167 xxt_handle->mvi = set_mvi(local2global, n, m, matvec, grid_data); 168 169 /* matrix is assumed to be of full rank */ 170 /* LATER we can reset to indicate rank def. */ 171 xxt_handle->ns=0; 172 173 /* determine separators and generate firing order - NB xxt info set here */ 174 det_separators(xxt_handle); 175 176 #ifdef DEBUG 177 flag = do_xxt_factor(xxt_handle); 178 error_msg_warning("XXT_factor() :: end %d (flag=%d)\n",n_xxt_handles,flag); 179 return(flag); 180 #else 181 return(do_xxt_factor(xxt_handle)); 182 #endif 183 } 184 185 186 /*************************************xxt.c************************************ 187 Function: XXT_solve 188 189 Input : 190 Output: 191 Return: 192 Description: 193 **************************************xxt.c***********************************/ 194 int 195 XXT_solve(xxt_ADT xxt_handle, double *x, double *b) 196 { 197 #if defined(NXSRC) && defined(TIMING) 198 double dclock(), time=0.0; 199 #elif defined(MPISRC) && defined(TIMING) 200 double MPI_Wtime(), time=0.0; 201 #endif 202 #ifdef INFO 203 REAL vals[3], work[3]; 204 int op[] = {NON_UNIFORM,GL_MIN,GL_MAX,GL_ADD}; 205 #endif 206 207 208 #ifdef DEBUG 209 error_msg_warning("XXT_solve() :: start %d\n",n_xxt_handles); 210 #endif 211 212 check_init(); 213 check_handle(xxt_handle); 214 215 #if defined(NXSRC) && defined(TIMING) 216 time = dclock(); 217 #elif defined(MPISRC) && defined(TIMING) 218 time = MPI_Wtime(); 219 #endif 220 221 /* need to copy b into x? */ 222 if (b) 223 {rvec_copy(x,b,xxt_handle->mvi->n);} 224 do_xxt_solve(xxt_handle,x); 225 226 #if defined(NXSRC) && defined(TIMING) 227 time = dclock() - time; 228 #elif defined(MPISRC) && defined(TIMING) 229 time = MPI_Wtime() - time; 230 #endif 231 232 #ifdef TIMING 233 xxt_handle->info->nsolves++; 234 xxt_handle->info->tot_solve_time+=time; 235 236 #ifdef INFO 237 vals[0]=vals[1]=vals[2]= (REAL) time; 238 grop(vals,work,sizeof(op)/sizeof(op[0])-1,op); 239 if (!my_id) 240 { 241 printf("%d :: min xxt_slv=%g\n",my_id,vals[0]); 242 printf("%d :: max xxt_slv=%g\n",my_id,vals[1]); 243 printf("%d :: avg xxt_slv=%g\n",my_id,vals[2]/num_nodes); 244 } 245 #endif 246 #endif 247 248 #ifdef DEBUG 249 error_msg_warning("XXT_solve() :: end %d\n",n_xxt_handles); 250 #endif 251 252 return(0); 253 } 254 255 256 /*************************************xxt.c************************************ 257 Function: XXT_free() 258 259 Input : 260 Output: 261 Return: 262 Description: 263 **************************************xxt.c***********************************/ 264 int 265 XXT_free(xxt_ADT xxt_handle) 266 { 267 #ifdef DEBUG 268 error_msg_warning("XXT_free() :: start %d\n",n_xxt_handles); 269 #endif 270 271 check_init(); 272 check_handle(xxt_handle); 273 n_xxt_handles--; 274 275 bss_free(xxt_handle->info->nsep); 276 bss_free(xxt_handle->info->lnsep); 277 bss_free(xxt_handle->info->fo); 278 bss_free(xxt_handle->info->stages); 279 bss_free(xxt_handle->info->solve_uu); 280 bss_free(xxt_handle->info->solve_w); 281 bss_free(xxt_handle->info->x); 282 bss_free(xxt_handle->info->col_vals); 283 bss_free(xxt_handle->info->col_sz); 284 bss_free(xxt_handle->info->col_indices); 285 bss_free(xxt_handle->info); 286 bss_free(xxt_handle->mvi->local2global); 287 gs_free(xxt_handle->mvi->gs_handle); 288 bss_free(xxt_handle->mvi); 289 bss_free(xxt_handle); 290 291 292 #ifdef DEBUG 293 error_msg_warning("perm frees = %d\n",perm_frees()); 294 error_msg_warning("perm calls = %d\n",perm_calls()); 295 error_msg_warning("bss frees = %d\n",bss_frees()); 296 error_msg_warning("bss calls = %d\n",bss_calls()); 297 error_msg_warning("XXT_free() :: end %d\n",n_xxt_handles); 298 #endif 299 300 /* if the check fails we nuke */ 301 /* if NULL pointer passed to bss_free we nuke */ 302 /* if the calls to free fail that's not my problem */ 303 return(0); 304 } 305 306 307 #ifdef MLSRC 308 /*************************************xxt.c************************************ 309 Function: ML_XXT_factor() 310 311 Input : 312 Output: 313 Return: 314 Description: 315 316 ML requires that the solver call be checked in 317 **************************************xxt.c***********************************/ 318 PetscErrorCode 319 ML_XXT_factor(xxt_ADT xxt_handle, /* prev. allocated xxt handle */ 320 int *local2global, /* global column mapping */ 321 int n, /* local num rows */ 322 int m, /* local num cols */ 323 void *matvec, /* b_loc=A_local.x_loc */ 324 void *grid_data, /* grid data for matvec */ 325 int grid_tag, /* grid tag for ML_Set_CSolve */ 326 ML *my_ml /* ML handle */ 327 ) 328 { 329 #ifdef DEBUG 330 int flag; 331 #endif 332 333 334 #ifdef DEBUG 335 error_msg_warning("ML_XXT_factor() :: start %d\n",n_xxt_handles); 336 #endif 337 338 check_init(); 339 check_handle(xxt_handle); 340 if (my_ml->comm->ML_mypid!=my_id) 341 {error_msg_fatal("ML_XXT_factor bad my_id %d\t%d\n", 342 my_ml->comm->ML_mypid,my_id);} 343 if (my_ml->comm->ML_nprocs!=num_nodes) 344 {error_msg_fatal("ML_XXT_factor bad np %d\t%d\n", 345 my_ml->comm->ML_nprocs,num_nodes);} 346 347 my_ml->SingleLevel[grid_tag].csolve->func->external = ML_XXT_solve; 348 my_ml->SingleLevel[grid_tag].csolve->func->ML_id = ML_EXTERNAL; 349 my_ml->SingleLevel[grid_tag].csolve->data = xxt_handle; 350 351 /* done ML specific stuff ... back to reg sched pgm */ 352 #ifdef DEBUG 353 flag = XXT_factor(xxt_handle, local2global, n, m, matvec, grid_data); 354 error_msg_warning("ML_XXT_factor() :: end %d (flag=%d)\n",n_xxt_handles,flag); 355 return(flag); 356 #else 357 return(XXT_factor(xxt_handle, local2global, n, m, matvec, grid_data)); 358 #endif 359 } 360 361 362 /*************************************xxt.c************************************ 363 Function: ML_XXT_solve 364 365 Input : 366 Output: 367 Return: 368 Description: 369 **************************************xxt.c***********************************/ 370 void 371 ML_XXT_solve(xxt_ADT xxt_handle, int lx, double *sol, int lb, double *rhs) 372 { 373 XXT_solve(xxt_handle, sol, rhs); 374 } 375 #endif 376 377 378 /*************************************xxt.c************************************ 379 Function: 380 381 Input : 382 Output: 383 Return: 384 Description: 385 **************************************xxt.c***********************************/ 386 int 387 XXT_stats(xxt_ADT xxt_handle) 388 { 389 int op[] = {NON_UNIFORM,GL_MIN,GL_MAX,GL_ADD,GL_MIN,GL_MAX,GL_ADD,GL_MIN,GL_MAX,GL_ADD}; 390 int fop[] = {NON_UNIFORM,GL_MIN,GL_MAX,GL_ADD}; 391 int vals[9], work[9]; 392 REAL fvals[3], fwork[3]; 393 394 395 #ifdef DEBUG 396 error_msg_warning("xxt_stats() :: begin\n"); 397 #endif 398 399 check_init(); 400 check_handle(xxt_handle); 401 402 /* if factorization not done there are no stats */ 403 if (!xxt_handle->info||!xxt_handle->mvi) 404 { 405 if (!my_id) 406 {printf("XXT_stats() :: no stats available!\n");} 407 return 1; 408 } 409 410 vals[0]=vals[1]=vals[2]=xxt_handle->info->nnz; 411 vals[3]=vals[4]=vals[5]=xxt_handle->mvi->n; 412 vals[6]=vals[7]=vals[8]=xxt_handle->info->msg_buf_sz; 413 giop(vals,work,sizeof(op)/sizeof(op[0])-1,op); 414 415 fvals[0]=fvals[1]=fvals[2] 416 =xxt_handle->info->tot_solve_time/xxt_handle->info->nsolves++; 417 grop(fvals,fwork,sizeof(fop)/sizeof(fop[0])-1,fop); 418 419 if (!my_id) 420 { 421 printf("%d :: min xxt_nnz=%d\n",my_id,vals[0]); 422 printf("%d :: max xxt_nnz=%d\n",my_id,vals[1]); 423 printf("%d :: avg xxt_nnz=%g\n",my_id,1.0*vals[2]/num_nodes); 424 printf("%d :: tot xxt_nnz=%d\n",my_id,vals[2]); 425 printf("%d :: xxt C(2d) =%g\n",my_id,vals[2]/(pow(1.0*vals[5],1.5))); 426 printf("%d :: xxt C(3d) =%g\n",my_id,vals[2]/(pow(1.0*vals[5],1.6667))); 427 printf("%d :: min xxt_n =%d\n",my_id,vals[3]); 428 printf("%d :: max xxt_n =%d\n",my_id,vals[4]); 429 printf("%d :: avg xxt_n =%g\n",my_id,1.0*vals[5]/num_nodes); 430 printf("%d :: tot xxt_n =%d\n",my_id,vals[5]); 431 printf("%d :: min xxt_buf=%d\n",my_id,vals[6]); 432 printf("%d :: max xxt_buf=%d\n",my_id,vals[7]); 433 printf("%d :: avg xxt_buf=%g\n",my_id,1.0*vals[8]/num_nodes); 434 printf("%d :: min xxt_slv=%g\n",my_id,fvals[0]); 435 printf("%d :: max xxt_slv=%g\n",my_id,fvals[1]); 436 printf("%d :: avg xxt_slv=%g\n",my_id,fvals[2]/num_nodes); 437 } 438 439 #ifdef DEBUG 440 error_msg_warning("xxt_stats() :: end\n"); 441 #endif 442 443 return(0); 444 } 445 446 447 /*************************************xxt.c************************************ 448 Function: do_xxt_factor 449 450 Input : 451 Output: 452 Return: 453 Description: get A_local, local portion of global coarse matrix which 454 is a row dist. nxm matrix w/ n<m. 455 o my_ml holds address of ML struct associated w/A_local and coarse grid 456 o local2global holds global number of column i (i=0,...,m-1) 457 o local2global holds global number of row i (i=0,...,n-1) 458 o mylocmatvec performs A_local . vec_local (note that gs is performed using 459 gs_init/gop). 460 461 mylocmatvec = my_ml->Amat[grid_tag].matvec->external; 462 mylocmatvec (void :: void *data, double *in, double *out) 463 **************************************xxt.c***********************************/ 464 static 465 int 466 do_xxt_factor(xxt_ADT xxt_handle) 467 { 468 int flag; 469 470 471 #ifdef DEBUG 472 error_msg_warning("do_xxt_factor() :: begin\n"); 473 #endif 474 475 flag=xxt_generate(xxt_handle); 476 477 #ifdef INFO 478 XXT_stats(xxt_handle); 479 bss_stats(); 480 perm_stats(); 481 #endif 482 483 #ifdef DEBUG 484 error_msg_warning("do_xxt_factor() :: end\n"); 485 #endif 486 487 return(flag); 488 } 489 490 491 /*************************************xxt.c************************************ 492 Function: 493 494 Input : 495 Output: 496 Return: 497 Description: 498 **************************************xxt.c***********************************/ 499 static 500 int 501 xxt_generate(xxt_ADT xxt_handle) 502 { 503 int i,j,k,idex; 504 int dim, col; 505 REAL *u, *uu, *v, *z, *w, alpha, alpha_w; 506 int *segs; 507 int op[] = {GL_ADD,0}; 508 int off, len; 509 REAL *x_ptr; 510 int *iptr, flag; 511 int start=0, end, work; 512 int op2[] = {GL_MIN,0}; 513 gs_ADT gs_handle; 514 int *nsep, *lnsep, *fo; 515 int a_n=xxt_handle->mvi->n; 516 int a_m=xxt_handle->mvi->m; 517 int *a_local2global=xxt_handle->mvi->local2global; 518 int level; 519 int xxt_nnz=0, xxt_max_nnz=0; 520 int n, m; 521 int *col_sz, *col_indices, *stages; 522 REAL **col_vals, *x; 523 int n_global; 524 int xxt_zero_nnz=0; 525 int xxt_zero_nnz_0=0; 526 527 528 #ifdef DEBUG 529 error_msg_warning("xxt_generate() :: begin\n"); 530 #endif 531 532 n=xxt_handle->mvi->n; 533 nsep=xxt_handle->info->nsep; 534 lnsep=xxt_handle->info->lnsep; 535 fo=xxt_handle->info->fo; 536 end=lnsep[0]; 537 level=xxt_handle->level; 538 gs_handle=xxt_handle->mvi->gs_handle; 539 540 /* is there a null space? */ 541 /* LATER add in ability to detect null space by checking alpha */ 542 for (i=0, j=0; i<=level; i++) 543 {j+=nsep[i];} 544 545 m = j-xxt_handle->ns; 546 if (m!=j) 547 {printf("xxt_generate() :: null space exists %d %d %d\n",m,j,xxt_handle->ns);} 548 549 /* get and initialize storage for x local */ 550 /* note that x local is nxm and stored by columns */ 551 col_sz = (int*) bss_malloc(m*INT_LEN); 552 col_indices = (int*) bss_malloc((2*m+1)*sizeof(int)); 553 col_vals = (REAL **) bss_malloc(m*sizeof(REAL *)); 554 for (i=j=0; i<m; i++, j+=2) 555 { 556 col_indices[j]=col_indices[j+1]=col_sz[i]=-1; 557 col_vals[i] = NULL; 558 } 559 col_indices[j]=-1; 560 561 /* size of separators for each sub-hc working from bottom of tree to top */ 562 /* this looks like nsep[]=segments */ 563 stages = (int*) bss_malloc((level+1)*INT_LEN); 564 segs = (int*) bss_malloc((level+1)*INT_LEN); 565 ivec_zero(stages,level+1); 566 ivec_copy(segs,nsep,level+1); 567 for (i=0; i<level; i++) 568 {segs[i+1] += segs[i];} 569 stages[0] = segs[0]; 570 571 /* temporary vectors */ 572 u = (REAL *) bss_malloc(n*sizeof(REAL)); 573 z = (REAL *) bss_malloc(n*sizeof(REAL)); 574 v = (REAL *) bss_malloc(a_m*sizeof(REAL)); 575 uu = (REAL *) bss_malloc(m*sizeof(REAL)); 576 w = (REAL *) bss_malloc(m*sizeof(REAL)); 577 578 /* extra nnz due to replication of vertices across separators */ 579 for (i=1, j=0; i<=level; i++) 580 {j+=nsep[i];} 581 582 /* storage for sparse x values */ 583 n_global = xxt_handle->info->n_global; 584 xxt_max_nnz = (int)(2.5*pow(1.0*n_global,1.6667) + j*n/2)/num_nodes; 585 x = (REAL *) bss_malloc(xxt_max_nnz*sizeof(REAL)); 586 xxt_nnz = 0; 587 588 /* LATER - can embed next sep to fire in gs */ 589 /* time to make the donuts - generate X factor */ 590 for (dim=i=j=0;i<m;i++) 591 { 592 /* time to move to the next level? */ 593 while (i==segs[dim]) 594 { 595 #ifdef SAFE 596 if (dim==level) 597 {error_msg_fatal("dim about to exceed level\n"); break;} 598 #endif 599 600 stages[dim++]=i; 601 end+=lnsep[dim]; 602 } 603 stages[dim]=i; 604 605 /* which column are we firing? */ 606 /* i.e. set v_l */ 607 /* use new seps and do global min across hc to determine which one to fire */ 608 (start<end) ? (col=fo[start]) : (col=INT_MAX); 609 giop_hc(&col,&work,1,op2,dim); 610 611 /* shouldn't need this */ 612 if (col==INT_MAX) 613 { 614 error_msg_warning("hey ... col==INT_MAX??\n"); 615 continue; 616 } 617 618 /* do I own it? I should */ 619 rvec_zero(v ,a_m); 620 if (col==fo[start]) 621 { 622 start++; 623 idex=ivec_linear_search(col, a_local2global, a_n); 624 if (idex!=-1) 625 {v[idex] = 1.0; j++;} 626 else 627 {error_msg_fatal("NOT FOUND!\n");} 628 } 629 else 630 { 631 idex=ivec_linear_search(col, a_local2global, a_m); 632 if (idex!=-1) 633 {v[idex] = 1.0;} 634 } 635 636 /* perform u = A.v_l */ 637 rvec_zero(u,n); 638 do_matvec(xxt_handle->mvi,v,u); 639 640 /* uu = X^T.u_l (local portion) */ 641 /* technically only need to zero out first i entries */ 642 /* later turn this into an XXT_solve call ? */ 643 rvec_zero(uu,m); 644 x_ptr=x; 645 iptr = col_indices; 646 for (k=0; k<i; k++) 647 { 648 off = *iptr++; 649 len = *iptr++; 650 651 #if BLAS||CBLAS 652 uu[k] = dot(len,u+off,1,x_ptr,1); 653 #else 654 uu[k] = rvec_dot(u+off,x_ptr,len); 655 #endif 656 x_ptr+=len; 657 } 658 659 660 /* uu = X^T.u_l (comm portion) */ 661 ssgl_radd (uu, w, dim, stages); 662 663 /* z = X.uu */ 664 rvec_zero(z,n); 665 x_ptr=x; 666 iptr = col_indices; 667 for (k=0; k<i; k++) 668 { 669 off = *iptr++; 670 len = *iptr++; 671 672 #if BLAS||CBLAS 673 axpy(len,uu[k],x_ptr,1,z+off,1); 674 #else 675 rvec_axpy(z+off,x_ptr,uu[k],len); 676 #endif 677 x_ptr+=len; 678 } 679 680 /* compute v_l = v_l - z */ 681 rvec_zero(v+a_n,a_m-a_n); 682 #if BLAS&&CBLAS 683 axpy(n,-1.0,z,1,v,1); 684 #else 685 rvec_axpy(v,z,-1.0,n); 686 #endif 687 688 /* compute u_l = A.v_l */ 689 if (a_n!=a_m) 690 {gs_gop_hc(gs_handle,v,"+\0",dim);} 691 rvec_zero(u,n); 692 do_matvec(xxt_handle->mvi,v,u); 693 694 /* compute sqrt(alpha) = sqrt(v_l^T.u_l) - local portion */ 695 #if BLAS&&CBLAS 696 alpha = dot(n,u,1,v,1); 697 #else 698 alpha = rvec_dot(u,v,n); 699 #endif 700 /* compute sqrt(alpha) = sqrt(v_l^T.u_l) - comm portion */ 701 grop_hc(&alpha, &alpha_w, 1, op, dim); 702 703 alpha = (REAL) sqrt((double)alpha); 704 705 /* check for small alpha */ 706 /* LATER use this to detect and determine null space */ 707 #ifdef r8 708 if (fabs(alpha)<1.0e-14) 709 {error_msg_fatal("bad alpha! %g\n",alpha);} 710 #else 711 if (fabs((double) alpha) < 1.0e-6) 712 {error_msg_fatal("bad alpha! %g\n",alpha);} 713 #endif 714 715 /* compute v_l = v_l/sqrt(alpha) */ 716 rvec_scale(v,1.0/alpha,n); 717 718 /* add newly generated column, v_l, to X */ 719 flag = 1; 720 off=len=0; 721 for (k=0; k<n; k++) 722 { 723 if (v[k]!=0.0) 724 { 725 len=k; 726 if (flag) 727 {off=k; flag=0;} 728 } 729 } 730 731 len -= (off-1); 732 733 if (len>0) 734 { 735 if ((xxt_nnz+len)>xxt_max_nnz) 736 { 737 error_msg_warning("increasing space for X by 2x!\n"); 738 xxt_max_nnz *= 2; 739 x_ptr = (REAL *) bss_malloc(xxt_max_nnz*sizeof(REAL)); 740 rvec_copy(x_ptr,x,xxt_nnz); 741 bss_free(x); 742 x = x_ptr; 743 x_ptr+=xxt_nnz; 744 } 745 xxt_nnz += len; 746 rvec_copy(x_ptr,v+off,len); 747 748 /* keep track of number of zeros */ 749 if (dim) 750 { 751 for (k=0; k<len; k++) 752 { 753 if (x_ptr[k]==0.0) 754 {xxt_zero_nnz++;} 755 } 756 } 757 else 758 { 759 for (k=0; k<len; k++) 760 { 761 if (x_ptr[k]==0.0) 762 {xxt_zero_nnz_0++;} 763 } 764 } 765 col_indices[2*i] = off; 766 col_sz[i] = col_indices[2*i+1] = len; 767 col_vals[i] = x_ptr; 768 } 769 else 770 { 771 col_indices[2*i] = 0; 772 col_sz[i] = col_indices[2*i+1] = 0; 773 col_vals[i] = x_ptr; 774 } 775 } 776 777 /* close off stages for execution phase */ 778 while (dim!=level) 779 { 780 stages[dim++]=i; 781 error_msg_warning("disconnected!!! dim(%d)!=level(%d)\n",dim,level); 782 } 783 stages[dim]=i; 784 785 xxt_handle->info->n=xxt_handle->mvi->n; 786 xxt_handle->info->m=m; 787 xxt_handle->info->nnz=xxt_nnz; 788 xxt_handle->info->max_nnz=xxt_max_nnz; 789 xxt_handle->info->msg_buf_sz=stages[level]-stages[0]; 790 xxt_handle->info->solve_uu = (REAL *) bss_malloc(m*sizeof(REAL)); 791 xxt_handle->info->solve_w = (REAL *) bss_malloc(m*sizeof(REAL)); 792 xxt_handle->info->x=x; 793 xxt_handle->info->col_vals=col_vals; 794 xxt_handle->info->col_sz=col_sz; 795 xxt_handle->info->col_indices=col_indices; 796 xxt_handle->info->stages=stages; 797 xxt_handle->info->nsolves=0; 798 xxt_handle->info->tot_solve_time=0.0; 799 800 bss_free(segs); 801 bss_free(u); 802 bss_free(v); 803 bss_free(uu); 804 bss_free(z); 805 bss_free(w); 806 807 #ifdef DEBUG 808 error_msg_warning("xxt_generate() :: end\n"); 809 #endif 810 811 return(0); 812 } 813 814 815 /*************************************xxt.c************************************ 816 Function: 817 818 Input : 819 Output: 820 Return: 821 Description: 822 **************************************xxt.c***********************************/ 823 static 824 void 825 do_xxt_solve(xxt_ADT xxt_handle, register REAL *uc) 826 { 827 register int off, len, *iptr; 828 int level =xxt_handle->level; 829 int n =xxt_handle->info->n; 830 int m =xxt_handle->info->m; 831 int *stages =xxt_handle->info->stages; 832 int *col_indices=xxt_handle->info->col_indices; 833 register REAL *x_ptr, *uu_ptr; 834 #if BLAS||CBLAS 835 REAL zero=0.0; 836 #endif 837 REAL *solve_uu=xxt_handle->info->solve_uu; 838 REAL *solve_w =xxt_handle->info->solve_w; 839 REAL *x =xxt_handle->info->x; 840 841 #ifdef DEBUG 842 error_msg_warning("do_xxt_solve() :: begin\n"); 843 #endif 844 845 uu_ptr=solve_uu; 846 #if BLAS||CBLAS 847 copy(m,&zero,0,uu_ptr,1); 848 #else 849 rvec_zero(uu_ptr,m); 850 #endif 851 852 /* x = X.Y^T.b */ 853 /* uu = Y^T.b */ 854 for (x_ptr=x,iptr=col_indices; *iptr!=-1; x_ptr+=len) 855 { 856 off=*iptr++; len=*iptr++; 857 #if BLAS||CBLAS 858 *uu_ptr++ = dot(len,uc+off,1,x_ptr,1); 859 #else 860 *uu_ptr++ = rvec_dot(uc+off,x_ptr,len); 861 #endif 862 } 863 864 /* comunication of beta */ 865 uu_ptr=solve_uu; 866 if (level) {ssgl_radd(uu_ptr, solve_w, level, stages);} 867 868 #if BLAS||CBLAS 869 copy(n,&zero,0,uc,1); 870 #else 871 rvec_zero(uc,n); 872 #endif 873 874 /* x = X.uu */ 875 for (x_ptr=x,iptr=col_indices; *iptr!=-1; x_ptr+=len) 876 { 877 off=*iptr++; len=*iptr++; 878 #if BLAS||CBLAS 879 axpy(len,*uu_ptr++,x_ptr,1,uc+off,1); 880 #else 881 rvec_axpy(uc+off,x_ptr,*uu_ptr++,len); 882 #endif 883 } 884 885 #ifdef DEBUG 886 error_msg_warning("do_xxt_solve() :: end\n"); 887 #endif 888 } 889 890 891 /*************************************Xxt.c************************************ 892 Function: check_init 893 894 Input : 895 Output: 896 Return: 897 Description: 898 **************************************xxt.c***********************************/ 899 static 900 void 901 check_init(void) 902 { 903 #ifdef DEBUG 904 error_msg_warning("check_init() :: start %d\n",n_xxt_handles); 905 #endif 906 907 comm_init(); 908 /* 909 perm_init(); 910 bss_init(); 911 */ 912 913 #ifdef DEBUG 914 error_msg_warning("check_init() :: end %d\n",n_xxt_handles); 915 #endif 916 } 917 918 919 /*************************************xxt.c************************************ 920 Function: check_handle() 921 922 Input : 923 Output: 924 Return: 925 Description: 926 **************************************xxt.c***********************************/ 927 static 928 void 929 check_handle(xxt_ADT xxt_handle) 930 { 931 #ifdef SAFE 932 int vals[2], work[2], op[] = {NON_UNIFORM,GL_MIN,GL_MAX}; 933 #endif 934 935 936 #ifdef DEBUG 937 error_msg_warning("check_handle() :: start %d\n",n_xxt_handles); 938 #endif 939 940 if (xxt_handle==NULL) 941 {error_msg_fatal("check_handle() :: bad handle :: NULL %d\n",xxt_handle);} 942 943 #ifdef SAFE 944 vals[0]=vals[1]=xxt_handle->id; 945 giop(vals,work,sizeof(op)/sizeof(op[0])-1,op); 946 if ((vals[0]!=vals[1])||(xxt_handle->id<=0)) 947 {error_msg_fatal("check_handle() :: bad handle :: id mismatch min/max %d/%d %d\n", 948 vals[0],vals[1], xxt_handle->id);} 949 #endif 950 951 #ifdef DEBUG 952 error_msg_warning("check_handle() :: end %d\n",n_xxt_handles); 953 #endif 954 } 955 956 957 /*************************************xxt.c************************************ 958 Function: det_separators 959 960 Input : 961 Output: 962 Return: 963 Description: 964 det_separators(xxt_handle, local2global, n, m, mylocmatvec, grid_data); 965 **************************************xxt.c***********************************/ 966 static 967 void 968 det_separators(xxt_ADT xxt_handle) 969 { 970 int i, ct, id; 971 int mask, edge, *iptr; 972 int *dir, *used; 973 int sum[4], w[4]; 974 REAL rsum[4], rw[4]; 975 int op[] = {GL_ADD,0}; 976 REAL *lhs, *rhs; 977 int *nsep, *lnsep, *fo, nfo=0; 978 gs_ADT gs_handle=xxt_handle->mvi->gs_handle; 979 int *local2global=xxt_handle->mvi->local2global; 980 int n=xxt_handle->mvi->n; 981 int m=xxt_handle->mvi->m; 982 int level=xxt_handle->level; 983 int shared=FALSE; 984 985 #ifdef DEBUG 986 error_msg_warning("det_separators() :: start %d %d %d\n",level,n,m); 987 #endif 988 989 dir = (int*)bss_malloc(INT_LEN*(level+1)); 990 nsep = (int*)bss_malloc(INT_LEN*(level+1)); 991 lnsep= (int*)bss_malloc(INT_LEN*(level+1)); 992 fo = (int*)bss_malloc(INT_LEN*(n+1)); 993 used = (int*)bss_malloc(INT_LEN*n); 994 995 ivec_zero(dir ,level+1); 996 ivec_zero(nsep ,level+1); 997 ivec_zero(lnsep,level+1); 998 ivec_set (fo ,-1,n+1); 999 ivec_zero(used,n); 1000 1001 lhs = (double*)bss_malloc(REAL_LEN*m); 1002 rhs = (double*)bss_malloc(REAL_LEN*m); 1003 1004 /* determine the # of unique dof */ 1005 rvec_zero(lhs,m); 1006 rvec_set(lhs,1.0,n); 1007 gs_gop_hc(gs_handle,lhs,"+\0",level); 1008 rvec_zero(rsum,2); 1009 for (ct=i=0;i<n;i++) 1010 { 1011 if (lhs[i]!=0.0) 1012 {rsum[0]+=1.0/lhs[i]; rsum[1]+=lhs[i];} 1013 } 1014 grop_hc(rsum,rw,2,op,level); 1015 rsum[0]+=0.1; 1016 rsum[1]+=0.1; 1017 /* if (!my_id) 1018 { 1019 printf("xxt n unique = %d (%g)\n",(int) rsum[0], rsum[0]); 1020 printf("xxt n shared = %d (%g)\n",(int) rsum[1], rsum[1]); 1021 }*/ 1022 1023 if (fabs(rsum[0]-rsum[1])>EPS) 1024 {shared=TRUE;} 1025 1026 xxt_handle->info->n_global=xxt_handle->info->m_global=(int) rsum[0]; 1027 xxt_handle->mvi->n_global =xxt_handle->mvi->m_global =(int) rsum[0]; 1028 1029 /* determine separator sets top down */ 1030 if (shared) 1031 { 1032 for (iptr=fo+n,id=my_id,mask=num_nodes>>1,edge=level;edge>0;edge--,mask>>=1) 1033 { 1034 /* set rsh of hc, fire, and collect lhs responses */ 1035 (id<mask) ? rvec_zero(lhs,m) : rvec_set(lhs,1.0,m); 1036 gs_gop_hc(gs_handle,lhs,"+\0",edge); 1037 1038 /* set lsh of hc, fire, and collect rhs responses */ 1039 (id<mask) ? rvec_set(rhs,1.0,m) : rvec_zero(rhs,m); 1040 gs_gop_hc(gs_handle,rhs,"+\0",edge); 1041 1042 for (i=0;i<n;i++) 1043 { 1044 if (id< mask) 1045 { 1046 if (lhs[i]!=0.0) 1047 {lhs[i]=1.0;} 1048 } 1049 if (id>=mask) 1050 { 1051 if (rhs[i]!=0.0) 1052 {rhs[i]=1.0;} 1053 } 1054 } 1055 1056 if (id< mask) 1057 {gs_gop_hc(gs_handle,lhs,"+\0",edge-1);} 1058 else 1059 {gs_gop_hc(gs_handle,rhs,"+\0",edge-1);} 1060 1061 /* count number of dofs I own that have signal and not in sep set */ 1062 rvec_zero(rsum,4); 1063 for (ivec_zero(sum,4),ct=i=0;i<n;i++) 1064 { 1065 if (!used[i]) 1066 { 1067 /* number of unmarked dofs on node */ 1068 ct++; 1069 /* number of dofs to be marked on lhs hc */ 1070 if (id< mask) 1071 { 1072 if (lhs[i]!=0.0) 1073 {sum[0]++; rsum[0]+=1.0/lhs[i];} 1074 } 1075 /* number of dofs to be marked on rhs hc */ 1076 if (id>=mask) 1077 { 1078 if (rhs[i]!=0.0) 1079 {sum[1]++; rsum[1]+=1.0/rhs[i];} 1080 } 1081 } 1082 } 1083 1084 /* go for load balance - choose half with most unmarked dofs, bias LHS */ 1085 (id<mask) ? (sum[2]=ct) : (sum[3]=ct); 1086 (id<mask) ? (rsum[2]=ct) : (rsum[3]=ct); 1087 giop_hc(sum,w,4,op,edge); 1088 grop_hc(rsum,rw,4,op,edge); 1089 rsum[0]+=0.1; rsum[1]+=0.1; rsum[2]+=0.1; rsum[3]+=0.1; 1090 1091 if (id<mask) 1092 { 1093 /* mark dofs I own that have signal and not in sep set */ 1094 for (ct=i=0;i<n;i++) 1095 { 1096 if ((!used[i])&&(lhs[i]!=0.0)) 1097 { 1098 ct++; nfo++; 1099 1100 if (nfo>n) 1101 {error_msg_fatal("nfo about to exceed n\n");} 1102 1103 *--iptr = local2global[i]; 1104 used[i]=edge; 1105 } 1106 } 1107 if (ct>1) {ivec_sort(iptr,ct);} 1108 1109 lnsep[edge]=ct; 1110 nsep[edge]=(int) rsum[0]; 1111 dir [edge]=LEFT; 1112 } 1113 1114 if (id>=mask) 1115 { 1116 /* mark dofs I own that have signal and not in sep set */ 1117 for (ct=i=0;i<n;i++) 1118 { 1119 if ((!used[i])&&(rhs[i]!=0.0)) 1120 { 1121 ct++; nfo++; 1122 1123 if (nfo>n) 1124 {error_msg_fatal("nfo about to exceed n\n");} 1125 1126 *--iptr = local2global[i]; 1127 used[i]=edge; 1128 } 1129 } 1130 if (ct>1) {ivec_sort(iptr,ct);} 1131 1132 lnsep[edge]=ct; 1133 nsep[edge]= (int) rsum[1]; 1134 dir [edge]=RIGHT; 1135 } 1136 1137 /* LATER or we can recur on these to order seps at this level */ 1138 /* do we need full set of separators for this? */ 1139 1140 /* fold rhs hc into lower */ 1141 if (id>=mask) 1142 {id-=mask;} 1143 } 1144 } 1145 else 1146 { 1147 for (iptr=fo+n,id=my_id,mask=num_nodes>>1,edge=level;edge>0;edge--,mask>>=1) 1148 { 1149 /* set rsh of hc, fire, and collect lhs responses */ 1150 (id<mask) ? rvec_zero(lhs,m) : rvec_set(lhs,1.0,m); 1151 gs_gop_hc(gs_handle,lhs,"+\0",edge); 1152 1153 /* set lsh of hc, fire, and collect rhs responses */ 1154 (id<mask) ? rvec_set(rhs,1.0,m) : rvec_zero(rhs,m); 1155 gs_gop_hc(gs_handle,rhs,"+\0",edge); 1156 1157 /* count number of dofs I own that have signal and not in sep set */ 1158 for (ivec_zero(sum,4),ct=i=0;i<n;i++) 1159 { 1160 if (!used[i]) 1161 { 1162 /* number of unmarked dofs on node */ 1163 ct++; 1164 /* number of dofs to be marked on lhs hc */ 1165 if ((id< mask)&&(lhs[i]!=0.0)) {sum[0]++;} 1166 /* number of dofs to be marked on rhs hc */ 1167 if ((id>=mask)&&(rhs[i]!=0.0)) {sum[1]++;} 1168 } 1169 } 1170 1171 /* go for load balance - choose half with most unmarked dofs, bias LHS */ 1172 (id<mask) ? (sum[2]=ct) : (sum[3]=ct); 1173 giop_hc(sum,w,4,op,edge); 1174 1175 /* lhs hc wins */ 1176 if (sum[2]>=sum[3]) 1177 { 1178 if (id<mask) 1179 { 1180 /* mark dofs I own that have signal and not in sep set */ 1181 for (ct=i=0;i<n;i++) 1182 { 1183 if ((!used[i])&&(lhs[i]!=0.0)) 1184 { 1185 ct++; nfo++; 1186 *--iptr = local2global[i]; 1187 used[i]=edge; 1188 } 1189 } 1190 if (ct>1) {ivec_sort(iptr,ct);} 1191 lnsep[edge]=ct; 1192 } 1193 nsep[edge]=sum[0]; 1194 dir [edge]=LEFT; 1195 } 1196 /* rhs hc wins */ 1197 else 1198 { 1199 if (id>=mask) 1200 { 1201 /* mark dofs I own that have signal and not in sep set */ 1202 for (ct=i=0;i<n;i++) 1203 { 1204 if ((!used[i])&&(rhs[i]!=0.0)) 1205 { 1206 ct++; nfo++; 1207 *--iptr = local2global[i]; 1208 used[i]=edge; 1209 } 1210 } 1211 if (ct>1) {ivec_sort(iptr,ct);} 1212 lnsep[edge]=ct; 1213 } 1214 nsep[edge]=sum[1]; 1215 dir [edge]=RIGHT; 1216 } 1217 /* LATER or we can recur on these to order seps at this level */ 1218 /* do we need full set of separators for this? */ 1219 1220 /* fold rhs hc into lower */ 1221 if (id>=mask) 1222 {id-=mask;} 1223 } 1224 } 1225 1226 1227 /* level 0 is on processor case - so mark the remainder */ 1228 for (ct=i=0;i<n;i++) 1229 { 1230 if (!used[i]) 1231 { 1232 ct++; nfo++; 1233 *--iptr = local2global[i]; 1234 used[i]=edge; 1235 } 1236 } 1237 if (ct>1) {ivec_sort(iptr,ct);} 1238 lnsep[edge]=ct; 1239 nsep [edge]=ct; 1240 dir [edge]=LEFT; 1241 1242 xxt_handle->info->nsep=nsep; 1243 xxt_handle->info->lnsep=lnsep; 1244 xxt_handle->info->fo=fo; 1245 xxt_handle->info->nfo=nfo; 1246 1247 bss_free(dir); 1248 bss_free(lhs); 1249 bss_free(rhs); 1250 bss_free(used); 1251 1252 #ifdef DEBUG 1253 error_msg_warning("det_separators() :: end\n"); 1254 #endif 1255 } 1256 1257 1258 /*************************************xxt.c************************************ 1259 Function: set_mvi 1260 1261 Input : 1262 Output: 1263 Return: 1264 Description: 1265 **************************************xxt.c***********************************/ 1266 static 1267 mv_info *set_mvi(int *local2global, int n, int m, void *matvec, void *grid_data) 1268 { 1269 mv_info *mvi; 1270 1271 1272 #ifdef DEBUG 1273 error_msg_warning("set_mvi() :: start\n"); 1274 #endif 1275 1276 mvi = (mv_info*)bss_malloc(sizeof(mv_info)); 1277 mvi->n=n; 1278 mvi->m=m; 1279 mvi->n_global=-1; 1280 mvi->m_global=-1; 1281 mvi->local2global=(int*)bss_malloc((m+1)*INT_LEN); 1282 ivec_copy(mvi->local2global,local2global,m); 1283 mvi->local2global[m] = INT_MAX; 1284 mvi->matvec=(PetscErrorCode (*)(mv_info*,REAL*,REAL*))matvec; 1285 mvi->grid_data=grid_data; 1286 1287 /* set xxt communication handle to perform restricted matvec */ 1288 mvi->gs_handle = gs_init(local2global, m, num_nodes); 1289 1290 #ifdef DEBUG 1291 error_msg_warning("set_mvi() :: end \n"); 1292 #endif 1293 1294 return(mvi); 1295 } 1296 1297 1298 /*************************************xxt.c************************************ 1299 Function: set_mvi 1300 1301 Input : 1302 Output: 1303 Return: 1304 Description: 1305 1306 computes u = A.v 1307 do_matvec(xxt_handle->mvi,v,u); 1308 **************************************xxt.c***********************************/ 1309 static 1310 void do_matvec(mv_info *A, REAL *v, REAL *u) 1311 { 1312 A->matvec((mv_info*)A->grid_data,v,u); 1313 } 1314 1315 1316 1317