1 2 /*************************************xyt.c************************************ 3 Module Name: xyt 4 Module Info: 5 6 author: Henry M. Tufo III 7 e-mail: hmt@asci.uchicago.edu 8 contact: 9 +--------------------------------+--------------------------------+ 10 |MCS Division - Building 221 |Department of Computer Science | 11 |Argonne National Laboratory |Ryerson 152 | 12 |9700 S. Cass Avenue |The University of Chicago | 13 |Argonne, IL 60439 |Chicago, IL 60637 | 14 |(630) 252-5354/5986 ph/fx |(773) 702-6019/8487 ph/fx | 15 +--------------------------------+--------------------------------+ 16 17 Last Modification: 3.20.01 18 **************************************xyt.c***********************************/ 19 #include <../src/ksp/pc/impls/tfs/tfs.h> 20 21 #define LEFT -1 22 #define RIGHT 1 23 #define BOTH 0 24 25 typedef struct xyt_solver_info { 26 PetscInt n, m, n_global, m_global; 27 PetscInt nnz, max_nnz, msg_buf_sz; 28 PetscInt *nsep, *lnsep, *fo, nfo, *stages; 29 PetscInt *xcol_sz, *xcol_indices; 30 PetscScalar **xcol_vals, *x, *solve_uu, *solve_w; 31 PetscInt *ycol_sz, *ycol_indices; 32 PetscScalar **ycol_vals, *y; 33 PetscInt nsolves; 34 PetscScalar tot_solve_time; 35 } xyt_info; 36 37 38 typedef struct matvec_info { 39 PetscInt n, m, n_global, m_global; 40 PetscInt *local2global; 41 PCTFS_gs_ADT PCTFS_gs_handle; 42 PetscErrorCode (*matvec)(struct matvec_info*,PetscScalar*,PetscScalar*); 43 void *grid_data; 44 } mv_info; 45 46 struct xyt_CDT{ 47 PetscInt id; 48 PetscInt ns; 49 PetscInt level; 50 xyt_info *info; 51 mv_info *mvi; 52 }; 53 54 static PetscInt n_xyt=0; 55 static PetscInt n_xyt_handles=0; 56 57 /* prototypes */ 58 static PetscErrorCode do_xyt_solve(xyt_ADT xyt_handle, PetscScalar *rhs); 59 static PetscErrorCode check_handle(xyt_ADT xyt_handle); 60 static PetscErrorCode det_separators(xyt_ADT xyt_handle); 61 static PetscErrorCode do_matvec(mv_info *A, PetscScalar *v, PetscScalar *u); 62 static PetscInt xyt_generate(xyt_ADT xyt_handle); 63 static PetscInt do_xyt_factor(xyt_ADT xyt_handle); 64 static mv_info *set_mvi(PetscInt *local2global, PetscInt n, PetscInt m, PetscErrorCode (*matvec)(mv_info*,PetscScalar*,PetscScalar*), void *grid_data); 65 66 /**************************************xyt.c***********************************/ 67 xyt_ADT XYT_new(void) 68 { 69 xyt_ADT xyt_handle; 70 71 /* rolling count on n_xyt ... pot. problem here */ 72 n_xyt_handles++; 73 xyt_handle = (xyt_ADT)malloc(sizeof(struct xyt_CDT)); 74 xyt_handle->id = ++n_xyt; 75 xyt_handle->info = NULL; 76 xyt_handle->mvi = NULL; 77 78 return(xyt_handle); 79 } 80 81 /**************************************xyt.c***********************************/ 82 PetscInt XYT_factor(xyt_ADT xyt_handle, /* prev. allocated xyt handle */ 83 PetscInt *local2global, /* global column mapping */ 84 PetscInt n, /* local num rows */ 85 PetscInt m, /* local num cols */ 86 PetscErrorCode (*matvec)(void*,PetscScalar*,PetscScalar*), /* b_loc=A_local.x_loc */ 87 void *grid_data) /* grid data for matvec */ 88 { 89 90 PCTFS_comm_init(); 91 check_handle(xyt_handle); 92 93 /* only 2^k for now and all nodes participating */ 94 if ((1<<(xyt_handle->level=PCTFS_i_log2_num_nodes))!=PCTFS_num_nodes) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_PLIB,"only 2^k for now and MPI_COMM_WORLD!!! %D != %D\n",1<<PCTFS_i_log2_num_nodes,PCTFS_num_nodes); 95 96 /* space for X info */ 97 xyt_handle->info = (xyt_info*)malloc(sizeof(xyt_info)); 98 99 /* set up matvec handles */ 100 xyt_handle->mvi = set_mvi(local2global, n, m, (PetscErrorCode (*)(mv_info*,PetscScalar*,PetscScalar*))matvec, grid_data); 101 102 /* matrix is assumed to be of full rank */ 103 /* LATER we can reset to indicate rank def. */ 104 xyt_handle->ns=0; 105 106 /* determine separators and generate firing order - NB xyt info set here */ 107 det_separators(xyt_handle); 108 109 return(do_xyt_factor(xyt_handle)); 110 } 111 112 /**************************************xyt.c***********************************/ 113 PetscInt XYT_solve(xyt_ADT xyt_handle, PetscScalar *x, PetscScalar *b) 114 { 115 PCTFS_comm_init(); 116 check_handle(xyt_handle); 117 118 /* need to copy b into x? */ 119 if (b) 120 {PCTFS_rvec_copy(x,b,xyt_handle->mvi->n);} 121 do_xyt_solve(xyt_handle,x); 122 123 return(0); 124 } 125 126 /**************************************xyt.c***********************************/ 127 PetscInt XYT_free(xyt_ADT xyt_handle) 128 { 129 PCTFS_comm_init(); 130 check_handle(xyt_handle); 131 n_xyt_handles--; 132 133 free(xyt_handle->info->nsep); 134 free(xyt_handle->info->lnsep); 135 free(xyt_handle->info->fo); 136 free(xyt_handle->info->stages); 137 free(xyt_handle->info->solve_uu); 138 free(xyt_handle->info->solve_w); 139 free(xyt_handle->info->x); 140 free(xyt_handle->info->xcol_vals); 141 free(xyt_handle->info->xcol_sz); 142 free(xyt_handle->info->xcol_indices); 143 free(xyt_handle->info->y); 144 free(xyt_handle->info->ycol_vals); 145 free(xyt_handle->info->ycol_sz); 146 free(xyt_handle->info->ycol_indices); 147 free(xyt_handle->info); 148 free(xyt_handle->mvi->local2global); 149 PCTFS_gs_free(xyt_handle->mvi->PCTFS_gs_handle); 150 free(xyt_handle->mvi); 151 free(xyt_handle); 152 153 154 /* if the check fails we nuke */ 155 /* if NULL pointer passed to free we nuke */ 156 /* if the calls to free fail that's not my problem */ 157 return(0); 158 } 159 160 /**************************************xyt.c***********************************/ 161 PetscInt XYT_stats(xyt_ADT xyt_handle) 162 { 163 PetscInt op[] = {NON_UNIFORM,GL_MIN,GL_MAX,GL_ADD,GL_MIN,GL_MAX,GL_ADD,GL_MIN,GL_MAX,GL_ADD}; 164 PetscInt fop[] = {NON_UNIFORM,GL_MIN,GL_MAX,GL_ADD}; 165 PetscInt vals[9], work[9]; 166 PetscScalar fvals[3], fwork[3]; 167 168 PCTFS_comm_init(); 169 check_handle(xyt_handle); 170 171 /* if factorization not done there are no stats */ 172 if (!xyt_handle->info||!xyt_handle->mvi) { 173 if (!PCTFS_my_id) PetscPrintf(PETSC_COMM_WORLD,"XYT_stats() :: no stats available!\n"); 174 return 1; 175 } 176 177 vals[0]=vals[1]=vals[2]=xyt_handle->info->nnz; 178 vals[3]=vals[4]=vals[5]=xyt_handle->mvi->n; 179 vals[6]=vals[7]=vals[8]=xyt_handle->info->msg_buf_sz; 180 PCTFS_giop(vals,work,sizeof(op)/sizeof(op[0])-1,op); 181 182 fvals[0]=fvals[1]=fvals[2] 183 =xyt_handle->info->tot_solve_time/xyt_handle->info->nsolves++; 184 PCTFS_grop(fvals,fwork,sizeof(fop)/sizeof(fop[0])-1,fop); 185 186 if (!PCTFS_my_id) { 187 PetscPrintf(PETSC_COMM_WORLD,"%D :: min xyt_nnz=%D\n",PCTFS_my_id,vals[0]); 188 PetscPrintf(PETSC_COMM_WORLD,"%D :: max xyt_nnz=%D\n",PCTFS_my_id,vals[1]); 189 PetscPrintf(PETSC_COMM_WORLD,"%D :: avg xyt_nnz=%g\n",PCTFS_my_id,1.0*vals[2]/PCTFS_num_nodes); 190 PetscPrintf(PETSC_COMM_WORLD,"%D :: tot xyt_nnz=%D\n",PCTFS_my_id,vals[2]); 191 PetscPrintf(PETSC_COMM_WORLD,"%D :: xyt C(2d) =%g\n",PCTFS_my_id,vals[2]/(pow(1.0*vals[5],1.5))); 192 PetscPrintf(PETSC_COMM_WORLD,"%D :: xyt C(3d) =%g\n",PCTFS_my_id,vals[2]/(pow(1.0*vals[5],1.6667))); 193 PetscPrintf(PETSC_COMM_WORLD,"%D :: min xyt_n =%D\n",PCTFS_my_id,vals[3]); 194 PetscPrintf(PETSC_COMM_WORLD,"%D :: max xyt_n =%D\n",PCTFS_my_id,vals[4]); 195 PetscPrintf(PETSC_COMM_WORLD,"%D :: avg xyt_n =%g\n",PCTFS_my_id,1.0*vals[5]/PCTFS_num_nodes); 196 PetscPrintf(PETSC_COMM_WORLD,"%D :: tot xyt_n =%D\n",PCTFS_my_id,vals[5]); 197 PetscPrintf(PETSC_COMM_WORLD,"%D :: min xyt_buf=%D\n",PCTFS_my_id,vals[6]); 198 PetscPrintf(PETSC_COMM_WORLD,"%D :: max xyt_buf=%D\n",PCTFS_my_id,vals[7]); 199 PetscPrintf(PETSC_COMM_WORLD,"%D :: avg xyt_buf=%g\n",PCTFS_my_id,1.0*vals[8]/PCTFS_num_nodes); 200 PetscPrintf(PETSC_COMM_WORLD,"%D :: min xyt_slv=%g\n",PCTFS_my_id,fvals[0]); 201 PetscPrintf(PETSC_COMM_WORLD,"%D :: max xyt_slv=%g\n",PCTFS_my_id,fvals[1]); 202 PetscPrintf(PETSC_COMM_WORLD,"%D :: avg xyt_slv=%g\n",PCTFS_my_id,fvals[2]/PCTFS_num_nodes); 203 } 204 205 return(0); 206 } 207 208 209 /*************************************xyt.c************************************ 210 211 Description: get A_local, local portion of global coarse matrix which 212 is a row dist. nxm matrix w/ n<m. 213 o my_ml holds address of ML struct associated w/A_local and coarse grid 214 o local2global holds global number of column i (i=0,...,m-1) 215 o local2global holds global number of row i (i=0,...,n-1) 216 o mylocmatvec performs A_local . vec_local (note that gs is performed using 217 PCTFS_gs_init/gop). 218 219 mylocmatvec = my_ml->Amat[grid_tag].matvec->external; 220 mylocmatvec (void :: void *data, double *in, double *out) 221 **************************************xyt.c***********************************/ 222 static PetscInt do_xyt_factor(xyt_ADT xyt_handle) 223 { 224 return xyt_generate(xyt_handle); 225 } 226 227 /**************************************xyt.c***********************************/ 228 static PetscInt xyt_generate(xyt_ADT xyt_handle) 229 { 230 PetscInt i,j,k,idx; 231 PetscInt dim, col; 232 PetscScalar *u, *uu, *v, *z, *w, alpha, alpha_w; 233 PetscInt *segs; 234 PetscInt op[] = {GL_ADD,0}; 235 PetscInt off, len; 236 PetscScalar *x_ptr, *y_ptr; 237 PetscInt *iptr, flag; 238 PetscInt start=0, end, work; 239 PetscInt op2[] = {GL_MIN,0}; 240 PCTFS_gs_ADT PCTFS_gs_handle; 241 PetscInt *nsep, *lnsep, *fo; 242 PetscInt a_n=xyt_handle->mvi->n; 243 PetscInt a_m=xyt_handle->mvi->m; 244 PetscInt *a_local2global=xyt_handle->mvi->local2global; 245 PetscInt level; 246 PetscInt n, m; 247 PetscInt *xcol_sz, *xcol_indices, *stages; 248 PetscScalar **xcol_vals, *x; 249 PetscInt *ycol_sz, *ycol_indices; 250 PetscScalar **ycol_vals, *y; 251 PetscInt n_global; 252 PetscInt xt_nnz=0, xt_max_nnz=0; 253 PetscInt yt_nnz=0, yt_max_nnz=0; 254 PetscInt xt_zero_nnz =0; 255 PetscInt xt_zero_nnz_0=0; 256 PetscInt yt_zero_nnz =0; 257 PetscInt yt_zero_nnz_0=0; 258 PetscBLASInt i1 = 1,dlen; 259 PetscScalar dm1 = -1.0; 260 PetscErrorCode ierr; 261 262 n=xyt_handle->mvi->n; 263 nsep=xyt_handle->info->nsep; 264 lnsep=xyt_handle->info->lnsep; 265 fo=xyt_handle->info->fo; 266 end=lnsep[0]; 267 level=xyt_handle->level; 268 PCTFS_gs_handle=xyt_handle->mvi->PCTFS_gs_handle; 269 270 /* is there a null space? */ 271 /* LATER add in ability to detect null space by checking alpha */ 272 for (i=0, j=0; i<=level; i++) { j+=nsep[i]; } 273 274 m = j-xyt_handle->ns; 275 if (m!=j) { 276 ierr = PetscPrintf(PETSC_COMM_WORLD,"xyt_generate() :: null space exists %D %D %D\n",m,j,xyt_handle->ns);CHKERRQ(ierr); 277 } 278 279 ierr = PetscInfo2(0,"xyt_generate() :: X(%D,%D)\n",n,m);CHKERRQ(ierr); 280 281 /* get and initialize storage for x local */ 282 /* note that x local is nxm and stored by columns */ 283 xcol_sz = (PetscInt*) malloc(m*sizeof(PetscInt)); 284 xcol_indices = (PetscInt*) malloc((2*m+1)*sizeof(PetscInt)); 285 xcol_vals = (PetscScalar **) malloc(m*sizeof(PetscScalar *)); 286 for (i=j=0; i<m; i++, j+=2) { 287 xcol_indices[j]=xcol_indices[j+1]=xcol_sz[i]=-1; 288 xcol_vals[i] = NULL; 289 } 290 xcol_indices[j]=-1; 291 292 /* get and initialize storage for y local */ 293 /* note that y local is nxm and stored by columns */ 294 ycol_sz = (PetscInt*) malloc(m*sizeof(PetscInt)); 295 ycol_indices = (PetscInt*) malloc((2*m+1)*sizeof(PetscInt)); 296 ycol_vals = (PetscScalar **) malloc(m*sizeof(PetscScalar *)); 297 for (i=j=0; i<m; i++, j+=2) { 298 ycol_indices[j]=ycol_indices[j+1]=ycol_sz[i]=-1; 299 ycol_vals[i] = NULL; 300 } 301 ycol_indices[j]=-1; 302 303 /* size of separators for each sub-hc working from bottom of tree to top */ 304 /* this looks like nsep[]=segments */ 305 stages = (PetscInt*) malloc((level+1)*sizeof(PetscInt)); 306 segs = (PetscInt*) malloc((level+1)*sizeof(PetscInt)); 307 PCTFS_ivec_zero(stages,level+1); 308 PCTFS_ivec_copy(segs,nsep,level+1); 309 for (i=0; i<level; i++) { segs[i+1] += segs[i]; } 310 stages[0] = segs[0]; 311 312 /* temporary vectors */ 313 u = (PetscScalar *) malloc(n*sizeof(PetscScalar)); 314 z = (PetscScalar *) malloc(n*sizeof(PetscScalar)); 315 v = (PetscScalar *) malloc(a_m*sizeof(PetscScalar)); 316 uu = (PetscScalar *) malloc(m*sizeof(PetscScalar)); 317 w = (PetscScalar *) malloc(m*sizeof(PetscScalar)); 318 319 /* extra nnz due to replication of vertices across separators */ 320 for (i=1, j=0; i<=level; i++) { j+=nsep[i]; } 321 322 /* storage for sparse x values */ 323 n_global = xyt_handle->info->n_global; 324 xt_max_nnz = yt_max_nnz = (PetscInt)(2.5*pow(1.0*n_global,1.6667) + j*n/2)/PCTFS_num_nodes; 325 x = (PetscScalar *) malloc(xt_max_nnz*sizeof(PetscScalar)); 326 y = (PetscScalar *) malloc(yt_max_nnz*sizeof(PetscScalar)); 327 328 /* LATER - can embed next sep to fire in gs */ 329 /* time to make the donuts - generate X factor */ 330 for (dim=i=j=0;i<m;i++) { 331 /* time to move to the next level? */ 332 while (i==segs[dim]) { 333 if (dim==level) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"dim about to exceed level\n"); 334 stages[dim++]=i; 335 end+=lnsep[dim]; 336 } 337 stages[dim]=i; 338 339 /* which column are we firing? */ 340 /* i.e. set v_l */ 341 /* use new seps and do global min across hc to determine which one to fire */ 342 (start<end) ? (col=fo[start]) : (col=INT_MAX); 343 PCTFS_giop_hc(&col,&work,1,op2,dim); 344 345 /* shouldn't need this */ 346 if (col==INT_MAX) { 347 ierr = PetscInfo(0,"hey ... col==INT_MAX??\n");CHKERRQ(ierr); 348 continue; 349 } 350 351 /* do I own it? I should */ 352 PCTFS_rvec_zero(v ,a_m); 353 if (col==fo[start]) 354 { 355 start++; 356 idx=PCTFS_ivec_linear_search(col, a_local2global, a_n); 357 if (idx!=-1) { v[idx] = 1.0; j++; } 358 else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"NOT FOUND!\n"); 359 } else { 360 idx=PCTFS_ivec_linear_search(col, a_local2global, a_m); 361 if (idx!=-1) {v[idx] = 1.0;} 362 } 363 364 /* perform u = A.v_l */ 365 PCTFS_rvec_zero(u,n); 366 do_matvec(xyt_handle->mvi,v,u); 367 368 /* uu = X^T.u_l (local portion) */ 369 /* technically only need to zero out first i entries */ 370 /* later turn this into an XYT_solve call ? */ 371 PCTFS_rvec_zero(uu,m); 372 y_ptr=y; 373 iptr = ycol_indices; 374 for (k=0; k<i; k++) { 375 off = *iptr++; 376 len = *iptr++; 377 dlen = PetscBLASIntCast(len); 378 uu[k] = BLASdot_(&dlen,u+off,&i1,y_ptr,&i1); 379 y_ptr+=len; 380 } 381 382 /* uu = X^T.u_l (comm portion) */ 383 PCTFS_ssgl_radd (uu, w, dim, stages); 384 385 /* z = X.uu */ 386 PCTFS_rvec_zero(z,n); 387 x_ptr=x; 388 iptr = xcol_indices; 389 for (k=0; k<i; k++) { 390 off = *iptr++; 391 len = *iptr++; 392 dlen = PetscBLASIntCast(len); 393 BLASaxpy_(&dlen,&uu[k],x_ptr,&i1,z+off,&i1); 394 x_ptr+=len; 395 } 396 397 /* compute v_l = v_l - z */ 398 PCTFS_rvec_zero(v+a_n,a_m-a_n); 399 dlen = PetscBLASIntCast(n); 400 BLASaxpy_(&dlen,&dm1,z,&i1,v,&i1); 401 402 /* compute u_l = A.v_l */ 403 if (a_n!=a_m) { PCTFS_gs_gop_hc(PCTFS_gs_handle,v,"+\0",dim); } 404 PCTFS_rvec_zero(u,n); 405 do_matvec(xyt_handle->mvi,v,u); 406 407 /* compute sqrt(alpha) = sqrt(u_l^T.u_l) - local portion */ 408 dlen = PetscBLASIntCast(n); 409 alpha = BLASdot_(&dlen,u,&i1,u,&i1); 410 /* compute sqrt(alpha) = sqrt(u_l^T.u_l) - comm portion */ 411 PCTFS_grop_hc(&alpha, &alpha_w, 1, op, dim); 412 413 alpha = (PetscScalar) PetscSqrtReal((PetscReal)alpha); 414 415 /* check for small alpha */ 416 /* LATER use this to detect and determine null space */ 417 if (fabs(alpha)<1.0e-14) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"bad alpha! %g\n",alpha); 418 419 /* compute v_l = v_l/sqrt(alpha) */ 420 PCTFS_rvec_scale(v,1.0/alpha,n); 421 PCTFS_rvec_scale(u,1.0/alpha,n); 422 423 /* add newly generated column, v_l, to X */ 424 flag = 1; 425 off=len=0; 426 for (k=0; k<n; k++) { 427 if (v[k]!=0.0) { 428 len=k; 429 if (flag) {off=k; flag=0;} 430 } 431 } 432 433 len -= (off-1); 434 435 if (len>0) { 436 if ((xt_nnz+len)>xt_max_nnz) { 437 ierr = PetscInfo(0,"increasing space for X by 2x!\n");CHKERRQ(ierr); 438 xt_max_nnz *= 2; 439 x_ptr = (PetscScalar *) malloc(xt_max_nnz*sizeof(PetscScalar)); 440 PCTFS_rvec_copy(x_ptr,x,xt_nnz); 441 free(x); 442 x = x_ptr; 443 x_ptr+=xt_nnz; 444 } 445 xt_nnz += len; 446 PCTFS_rvec_copy(x_ptr,v+off,len); 447 448 /* keep track of number of zeros */ 449 if (dim) { 450 for (k=0; k<len; k++) { 451 if (x_ptr[k]==0.0) {xt_zero_nnz++;} 452 } 453 } else { 454 for (k=0; k<len; k++) { 455 if (x_ptr[k]==0.0) { xt_zero_nnz_0++; } 456 } 457 } 458 xcol_indices[2*i] = off; 459 xcol_sz[i] = xcol_indices[2*i+1] = len; 460 xcol_vals[i] = x_ptr; 461 } else { 462 xcol_indices[2*i] = 0; 463 xcol_sz[i] = xcol_indices[2*i+1] = 0; 464 xcol_vals[i] = x_ptr; 465 } 466 467 468 /* add newly generated column, u_l, to Y */ 469 flag = 1; 470 off=len=0; 471 for (k=0; k<n; k++) { 472 if (u[k]!=0.0) { 473 len=k; 474 if (flag) { off=k; flag=0; } 475 } 476 } 477 478 len -= (off-1); 479 480 if (len>0) { 481 if ((yt_nnz+len)>yt_max_nnz) { 482 ierr = PetscInfo(0,"increasing space for Y by 2x!\n");CHKERRQ(ierr); 483 yt_max_nnz *= 2; 484 y_ptr = (PetscScalar *) malloc(yt_max_nnz*sizeof(PetscScalar)); 485 PCTFS_rvec_copy(y_ptr,y,yt_nnz); 486 free(y); 487 y = y_ptr; 488 y_ptr+=yt_nnz; 489 } 490 yt_nnz += len; 491 PCTFS_rvec_copy(y_ptr,u+off,len); 492 493 /* keep track of number of zeros */ 494 if (dim) { 495 for (k=0; k<len; k++) { 496 if (y_ptr[k]==0.0) { yt_zero_nnz++; } 497 } 498 } else { 499 for (k=0; k<len; k++) { 500 if (y_ptr[k]==0.0) { yt_zero_nnz_0++; } 501 } 502 } 503 ycol_indices[2*i] = off; 504 ycol_sz[i] = ycol_indices[2*i+1] = len; 505 ycol_vals[i] = y_ptr; 506 } else { 507 ycol_indices[2*i] = 0; 508 ycol_sz[i] = ycol_indices[2*i+1] = 0; 509 ycol_vals[i] = y_ptr; 510 } 511 } 512 513 /* close off stages for execution phase */ 514 while (dim!=level) { 515 stages[dim++]=i; 516 ierr = PetscInfo2(0,"disconnected!!! dim(%D)!=level(%D)\n",dim,level);CHKERRQ(ierr); 517 } 518 stages[dim]=i; 519 520 xyt_handle->info->n=xyt_handle->mvi->n; 521 xyt_handle->info->m=m; 522 xyt_handle->info->nnz=xt_nnz + yt_nnz; 523 xyt_handle->info->max_nnz=xt_max_nnz + yt_max_nnz; 524 xyt_handle->info->msg_buf_sz=stages[level]-stages[0]; 525 xyt_handle->info->solve_uu = (PetscScalar *) malloc(m*sizeof(PetscScalar)); 526 xyt_handle->info->solve_w = (PetscScalar *) malloc(m*sizeof(PetscScalar)); 527 xyt_handle->info->x=x; 528 xyt_handle->info->xcol_vals=xcol_vals; 529 xyt_handle->info->xcol_sz=xcol_sz; 530 xyt_handle->info->xcol_indices=xcol_indices; 531 xyt_handle->info->stages=stages; 532 xyt_handle->info->y=y; 533 xyt_handle->info->ycol_vals=ycol_vals; 534 xyt_handle->info->ycol_sz=ycol_sz; 535 xyt_handle->info->ycol_indices=ycol_indices; 536 537 free(segs); 538 free(u); 539 free(v); 540 free(uu); 541 free(z); 542 free(w); 543 544 return(0); 545 } 546 547 /**************************************xyt.c***********************************/ 548 static PetscErrorCode do_xyt_solve(xyt_ADT xyt_handle, PetscScalar *uc) 549 { 550 PetscInt off, len, *iptr; 551 PetscInt level =xyt_handle->level; 552 PetscInt n =xyt_handle->info->n; 553 PetscInt m =xyt_handle->info->m; 554 PetscInt *stages =xyt_handle->info->stages; 555 PetscInt *xcol_indices=xyt_handle->info->xcol_indices; 556 PetscInt *ycol_indices=xyt_handle->info->ycol_indices; 557 PetscScalar *x_ptr, *y_ptr, *uu_ptr; 558 PetscScalar *solve_uu=xyt_handle->info->solve_uu; 559 PetscScalar *solve_w =xyt_handle->info->solve_w; 560 PetscScalar *x =xyt_handle->info->x; 561 PetscScalar *y =xyt_handle->info->y; 562 PetscBLASInt i1 = 1,dlen; 563 564 PetscFunctionBegin; 565 uu_ptr=solve_uu; 566 PCTFS_rvec_zero(uu_ptr,m); 567 568 /* x = X.Y^T.b */ 569 /* uu = Y^T.b */ 570 for (y_ptr=y,iptr=ycol_indices; *iptr!=-1; y_ptr+=len) 571 { 572 off=*iptr++; len=*iptr++; 573 dlen = PetscBLASIntCast(len); 574 *uu_ptr++ = BLASdot_(&dlen,uc+off,&i1,y_ptr,&i1); 575 } 576 577 /* comunication of beta */ 578 uu_ptr=solve_uu; 579 if (level) { PCTFS_ssgl_radd(uu_ptr, solve_w, level, stages); } 580 581 PCTFS_rvec_zero(uc,n); 582 583 /* x = X.uu */ 584 for (x_ptr=x,iptr=xcol_indices; *iptr!=-1; x_ptr+=len) { 585 off=*iptr++; len=*iptr++; 586 dlen = PetscBLASIntCast(len); 587 BLASaxpy_(&dlen,uu_ptr++,x_ptr,&i1,uc+off,&i1); 588 } 589 PetscFunctionReturn(0); 590 } 591 592 /**************************************xyt.c***********************************/ 593 static PetscErrorCode check_handle(xyt_ADT xyt_handle) 594 { 595 PetscInt vals[2], work[2], op[] = {NON_UNIFORM,GL_MIN,GL_MAX}; 596 597 PetscFunctionBegin; 598 if (!xyt_handle) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"check_handle() :: bad handle :: NULL %D\n",xyt_handle); 599 600 vals[0]=vals[1]=xyt_handle->id; 601 PCTFS_giop(vals,work,sizeof(op)/sizeof(op[0])-1,op); 602 if ((vals[0]!=vals[1])||(xyt_handle->id<=0)) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_PLIB,"check_handle() :: bad handle :: id mismatch min/max %D/%D %D\n", vals[0],vals[1], xyt_handle->id); 603 PetscFunctionReturn(0); 604 } 605 606 /**************************************xyt.c***********************************/ 607 static PetscErrorCode det_separators(xyt_ADT xyt_handle) 608 { 609 PetscInt i, ct, id; 610 PetscInt mask, edge, *iptr; 611 PetscInt *dir, *used; 612 PetscInt sum[4], w[4]; 613 PetscScalar rsum[4], rw[4]; 614 PetscInt op[] = {GL_ADD,0}; 615 PetscScalar *lhs, *rhs; 616 PetscInt *nsep, *lnsep, *fo, nfo=0; 617 PCTFS_gs_ADT PCTFS_gs_handle=xyt_handle->mvi->PCTFS_gs_handle; 618 PetscInt *local2global=xyt_handle->mvi->local2global; 619 PetscInt n=xyt_handle->mvi->n; 620 PetscInt m=xyt_handle->mvi->m; 621 PetscInt level=xyt_handle->level; 622 PetscInt shared=0; 623 PetscErrorCode ierr; 624 625 PetscFunctionBegin; 626 dir = (PetscInt*)malloc(sizeof(PetscInt)*(level+1)); 627 nsep = (PetscInt*)malloc(sizeof(PetscInt)*(level+1)); 628 lnsep= (PetscInt*)malloc(sizeof(PetscInt)*(level+1)); 629 fo = (PetscInt*)malloc(sizeof(PetscInt)*(n+1)); 630 used = (PetscInt*)malloc(sizeof(PetscInt)*n); 631 632 PCTFS_ivec_zero(dir ,level+1); 633 PCTFS_ivec_zero(nsep ,level+1); 634 PCTFS_ivec_zero(lnsep,level+1); 635 PCTFS_ivec_set (fo ,-1,n+1); 636 PCTFS_ivec_zero(used,n); 637 638 lhs = (PetscScalar*)malloc(sizeof(PetscScalar)*m); 639 rhs = (PetscScalar*)malloc(sizeof(PetscScalar)*m); 640 641 /* determine the # of unique dof */ 642 PCTFS_rvec_zero(lhs,m); 643 PCTFS_rvec_set(lhs,1.0,n); 644 PCTFS_gs_gop_hc(PCTFS_gs_handle,lhs,"+\0",level); 645 ierr = PetscInfo(0,"done first PCTFS_gs_gop_hc\n");CHKERRQ(ierr); 646 PCTFS_rvec_zero(rsum,2); 647 for (ct=i=0;i<n;i++) 648 { 649 if (lhs[i]!=0.0) { rsum[0]+=1.0/lhs[i]; rsum[1]+=lhs[i]; } 650 651 if (lhs[i]!=1.0) { 652 shared=1; 653 } 654 } 655 656 PCTFS_grop_hc(rsum,rw,2,op,level); 657 rsum[0]+=0.1; 658 rsum[1]+=0.1; 659 660 xyt_handle->info->n_global=xyt_handle->info->m_global=(PetscInt) rsum[0]; 661 xyt_handle->mvi->n_global =xyt_handle->mvi->m_global =(PetscInt) rsum[0]; 662 663 /* determine separator sets top down */ 664 if (shared) 665 { 666 /* solution is to do as in the symmetric shared case but then */ 667 /* pick the sub-hc with the most free dofs and do a mat-vec */ 668 /* and pick up the responses on the other sub-hc from the */ 669 /* initial separator set obtained from the symm. shared case */ 670 SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"shared dof separator determination not ready ... see hmt!!!\n"); 671 for (iptr=fo+n,id=PCTFS_my_id,mask=PCTFS_num_nodes>>1,edge=level;edge>0;edge--,mask>>=1) { 672 673 /* set rsh of hc, fire, and collect lhs responses */ 674 (id<mask) ? PCTFS_rvec_zero(lhs,m) : PCTFS_rvec_set(lhs,1.0,m); 675 PCTFS_gs_gop_hc(PCTFS_gs_handle,lhs,"+\0",edge); 676 677 /* set lsh of hc, fire, and collect rhs responses */ 678 (id<mask) ? PCTFS_rvec_set(rhs,1.0,m) : PCTFS_rvec_zero(rhs,m); 679 PCTFS_gs_gop_hc(PCTFS_gs_handle,rhs,"+\0",edge); 680 681 for (i=0;i<n;i++) { 682 if (id< mask) { 683 if (lhs[i]!=0.0) { lhs[i]=1.0; } 684 } 685 if (id>=mask) { 686 if (rhs[i]!=0.0) { rhs[i]=1.0; } 687 } 688 } 689 690 if (id< mask) { PCTFS_gs_gop_hc(PCTFS_gs_handle,lhs,"+\0",edge-1); } 691 else { PCTFS_gs_gop_hc(PCTFS_gs_handle,rhs,"+\0",edge-1); } 692 693 /* count number of dofs I own that have signal and not in sep set */ 694 PCTFS_rvec_zero(rsum,4); 695 for (PCTFS_ivec_zero(sum,4),ct=i=0;i<n;i++) { 696 if (!used[i]) { 697 /* number of unmarked dofs on node */ 698 ct++; 699 /* number of dofs to be marked on lhs hc */ 700 if (id< mask) { 701 if (lhs[i]!=0.0) { sum[0]++; rsum[0]+=1.0/lhs[i]; } 702 } 703 /* number of dofs to be marked on rhs hc */ 704 if (id>=mask) { 705 if (rhs[i]!=0.0) { sum[1]++; rsum[1]+=1.0/rhs[i]; } 706 } 707 } 708 } 709 710 /* go for load balance - choose half with most unmarked dofs, bias LHS */ 711 (id<mask) ? (sum[2]=ct) : (sum[3]=ct); 712 (id<mask) ? (rsum[2]=ct) : (rsum[3]=ct); 713 PCTFS_giop_hc(sum,w,4,op,edge); 714 PCTFS_grop_hc(rsum,rw,4,op,edge); 715 rsum[0]+=0.1; rsum[1]+=0.1; rsum[2]+=0.1; rsum[3]+=0.1; 716 717 if (id<mask) { 718 /* mark dofs I own that have signal and not in sep set */ 719 for (ct=i=0;i<n;i++) { 720 if ((!used[i])&&(lhs[i]!=0.0)) { 721 ct++; nfo++; 722 723 if (nfo>n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"nfo about to exceed n\n"); 724 725 *--iptr = local2global[i]; 726 used[i]=edge; 727 } 728 } 729 if (ct>1) {PCTFS_ivec_sort(iptr,ct);} 730 731 lnsep[edge]=ct; 732 nsep[edge]=(PetscInt) rsum[0]; 733 dir [edge]=LEFT; 734 } 735 736 if (id>=mask) { 737 /* mark dofs I own that have signal and not in sep set */ 738 for (ct=i=0;i<n;i++) { 739 if ((!used[i])&&(rhs[i]!=0.0)) { 740 ct++; nfo++; 741 742 if (nfo>n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"nfo about to exceed n\n"); 743 744 *--iptr = local2global[i]; 745 used[i]=edge; 746 } 747 } 748 if (ct>1) { PCTFS_ivec_sort(iptr,ct); } 749 750 lnsep[edge]=ct; 751 nsep[edge]= (PetscInt) rsum[1]; 752 dir [edge]=RIGHT; 753 } 754 755 /* LATER or we can recur on these to order seps at this level */ 756 /* do we need full set of separators for this? */ 757 758 /* fold rhs hc into lower */ 759 if (id>=mask) { id-=mask; } 760 } 761 } else { 762 for (iptr=fo+n,id=PCTFS_my_id,mask=PCTFS_num_nodes>>1,edge=level;edge>0;edge--,mask>>=1) { 763 /* set rsh of hc, fire, and collect lhs responses */ 764 (id<mask) ? PCTFS_rvec_zero(lhs,m) : PCTFS_rvec_set(lhs,1.0,m); 765 PCTFS_gs_gop_hc(PCTFS_gs_handle,lhs,"+\0",edge); 766 767 /* set lsh of hc, fire, and collect rhs responses */ 768 (id<mask) ? PCTFS_rvec_set(rhs,1.0,m) : PCTFS_rvec_zero(rhs,m); 769 PCTFS_gs_gop_hc(PCTFS_gs_handle,rhs,"+\0",edge); 770 771 /* count number of dofs I own that have signal and not in sep set */ 772 for (PCTFS_ivec_zero(sum,4),ct=i=0;i<n;i++) { 773 if (!used[i]) { 774 /* number of unmarked dofs on node */ 775 ct++; 776 /* number of dofs to be marked on lhs hc */ 777 if ((id< mask)&&(lhs[i]!=0.0)) { sum[0]++; } 778 /* number of dofs to be marked on rhs hc */ 779 if ((id>=mask)&&(rhs[i]!=0.0)) { sum[1]++; } 780 } 781 } 782 783 /* for the non-symmetric case we need separators of width 2 */ 784 /* so take both sides */ 785 (id<mask) ? (sum[2]=ct) : (sum[3]=ct); 786 PCTFS_giop_hc(sum,w,4,op,edge); 787 788 ct=0; 789 if (id<mask) { 790 /* mark dofs I own that have signal and not in sep set */ 791 for (i=0;i<n;i++) { 792 if ((!used[i])&&(lhs[i]!=0.0)) { 793 ct++; nfo++; 794 *--iptr = local2global[i]; 795 used[i]=edge; 796 } 797 } 798 /* LSH hc summation of ct should be sum[0] */ 799 } else { 800 /* mark dofs I own that have signal and not in sep set */ 801 for (i=0;i<n;i++) { 802 if ((!used[i])&&(rhs[i]!=0.0)) { 803 ct++; nfo++; 804 *--iptr = local2global[i]; 805 used[i]=edge; 806 } 807 } 808 /* RSH hc summation of ct should be sum[1] */ 809 } 810 811 if (ct>1) { PCTFS_ivec_sort(iptr,ct); } 812 lnsep[edge]=ct; 813 nsep[edge]=sum[0]+sum[1]; 814 dir [edge]=BOTH; 815 816 /* LATER or we can recur on these to order seps at this level */ 817 /* do we need full set of separators for this? */ 818 819 /* fold rhs hc into lower */ 820 if (id>=mask) 821 {id-=mask;} 822 } 823 } 824 825 /* level 0 is on processor case - so mark the remainder */ 826 for (ct=i=0;i<n;i++) { 827 if (!used[i]) { 828 ct++; nfo++; 829 *--iptr = local2global[i]; 830 used[i]=edge; 831 } 832 } 833 if (ct>1) {PCTFS_ivec_sort(iptr,ct);} 834 lnsep[edge]=ct; 835 nsep [edge]=ct; 836 dir [edge]=BOTH; 837 838 xyt_handle->info->nsep=nsep; 839 xyt_handle->info->lnsep=lnsep; 840 xyt_handle->info->fo=fo; 841 xyt_handle->info->nfo=nfo; 842 843 free(dir); 844 free(lhs); 845 free(rhs); 846 free(used); 847 PetscFunctionReturn(0); 848 } 849 850 /**************************************xyt.c***********************************/ 851 static mv_info *set_mvi(PetscInt *local2global, PetscInt n, PetscInt m, PetscErrorCode (*matvec)(mv_info*,PetscScalar*,PetscScalar*), void *grid_data) 852 { 853 mv_info *mvi; 854 855 856 mvi = (mv_info*)malloc(sizeof(mv_info)); 857 mvi->n=n; 858 mvi->m=m; 859 mvi->n_global=-1; 860 mvi->m_global=-1; 861 mvi->local2global=(PetscInt*)malloc((m+1)*sizeof(PetscInt)); 862 PCTFS_ivec_copy(mvi->local2global,local2global,m); 863 mvi->local2global[m] = INT_MAX; 864 mvi->matvec=matvec; 865 mvi->grid_data=grid_data; 866 867 /* set xyt communication handle to perform restricted matvec */ 868 mvi->PCTFS_gs_handle = PCTFS_gs_init(local2global, m, PCTFS_num_nodes); 869 870 return(mvi); 871 } 872 873 /**************************************xyt.c***********************************/ 874 static PetscErrorCode do_matvec(mv_info *A, PetscScalar *v, PetscScalar *u) 875 { 876 PetscFunctionBegin; 877 A->matvec((mv_info*)A->grid_data,v,u); 878 PetscFunctionReturn(0); 879 } 880 881 882 883