1 #define PETSCKSP_DLL 2 3 /*************************************xyt.c************************************ 4 Module Name: xyt 5 Module Info: 6 7 author: Henry M. Tufo III 8 e-mail: hmt@asci.uchicago.edu 9 contact: 10 +--------------------------------+--------------------------------+ 11 |MCS Division - Building 221 |Department of Computer Science | 12 |Argonne National Laboratory |Ryerson 152 | 13 |9700 S. Cass Avenue |The University of Chicago | 14 |Argonne, IL 60439 |Chicago, IL 60637 | 15 |(630) 252-5354/5986 ph/fx |(773) 702-6019/8487 ph/fx | 16 +--------------------------------+--------------------------------+ 17 18 Last Modification: 3.20.01 19 **************************************xyt.c***********************************/ 20 21 22 /*************************************xyt.c************************************ 23 NOTES ON USAGE: 24 25 **************************************xyt.c***********************************/ 26 #include "src/ksp/pc/impls/tfs/tfs.h" 27 28 #define LEFT -1 29 #define RIGHT 1 30 #define BOTH 0 31 #define MAX_FORTRAN_HANDLES 10 32 33 typedef struct xyt_solver_info { 34 int n, m, n_global, m_global; 35 int nnz, max_nnz, msg_buf_sz; 36 int *nsep, *lnsep, *fo, nfo, *stages; 37 int *xcol_sz, *xcol_indices; 38 PetscScalar **xcol_vals, *x, *solve_uu, *solve_w; 39 int *ycol_sz, *ycol_indices; 40 PetscScalar **ycol_vals, *y; 41 int nsolves; 42 PetscScalar tot_solve_time; 43 } xyt_info; 44 45 46 typedef struct matvec_info { 47 int n, m, n_global, m_global; 48 int *local2global; 49 gs_ADT gs_handle; 50 PetscErrorCode (*matvec)(struct matvec_info*,PetscScalar*,PetscScalar*); 51 void *grid_data; 52 } mv_info; 53 54 struct xyt_CDT{ 55 int id; 56 int ns; 57 int level; 58 xyt_info *info; 59 mv_info *mvi; 60 }; 61 62 static int n_xyt=0; 63 static int n_xyt_handles=0; 64 65 /* prototypes */ 66 static PetscErrorCode do_xyt_solve(xyt_ADT xyt_handle, PetscScalar *rhs); 67 static PetscErrorCode check_handle(xyt_ADT xyt_handle); 68 static PetscErrorCode det_separators(xyt_ADT xyt_handle); 69 static PetscErrorCode do_matvec(mv_info *A, PetscScalar *v, PetscScalar *u); 70 static int xyt_generate(xyt_ADT xyt_handle); 71 static int do_xyt_factor(xyt_ADT xyt_handle); 72 static mv_info *set_mvi(int *local2global, int n, int m, void *matvec, void *grid_data); 73 74 75 /*************************************xyt.c************************************ 76 Function: XYT_new() 77 78 Input : 79 Output: 80 Return: 81 Description: 82 **************************************xyt.c***********************************/ 83 xyt_ADT 84 XYT_new(void) 85 { 86 xyt_ADT xyt_handle; 87 88 89 90 /* rolling count on n_xyt ... pot. problem here */ 91 n_xyt_handles++; 92 xyt_handle = (xyt_ADT)malloc(sizeof(struct xyt_CDT)); 93 xyt_handle->id = ++n_xyt; 94 xyt_handle->info = NULL; 95 xyt_handle->mvi = NULL; 96 97 return(xyt_handle); 98 } 99 100 101 /*************************************xyt.c************************************ 102 Function: XYT_factor() 103 104 Input : 105 Output: 106 Return: 107 Description: 108 **************************************xyt.c***********************************/ 109 int 110 XYT_factor(xyt_ADT xyt_handle, /* prev. allocated xyt handle */ 111 int *local2global, /* global column mapping */ 112 int n, /* local num rows */ 113 int m, /* local num cols */ 114 void *matvec, /* b_loc=A_local.x_loc */ 115 void *grid_data /* grid data for matvec */ 116 ) 117 { 118 119 comm_init(); 120 check_handle(xyt_handle); 121 122 /* only 2^k for now and all nodes participating */ 123 if ((1<<(xyt_handle->level=i_log2_num_nodes))!=num_nodes) 124 {error_msg_fatal("only 2^k for now and MPI_COMM_WORLD!!! %d != %d\n",1<<i_log2_num_nodes,num_nodes);} 125 126 /* space for X info */ 127 xyt_handle->info = (xyt_info*)malloc(sizeof(xyt_info)); 128 129 /* set up matvec handles */ 130 xyt_handle->mvi = set_mvi(local2global, n, m, matvec, grid_data); 131 132 /* matrix is assumed to be of full rank */ 133 /* LATER we can reset to indicate rank def. */ 134 xyt_handle->ns=0; 135 136 /* determine separators and generate firing order - NB xyt info set here */ 137 det_separators(xyt_handle); 138 139 return(do_xyt_factor(xyt_handle)); 140 } 141 142 143 /*************************************xyt.c************************************ 144 Function: XYT_solve 145 146 Input : 147 Output: 148 Return: 149 Description: 150 **************************************xyt.c***********************************/ 151 int 152 XYT_solve(xyt_ADT xyt_handle, double *x, double *b) 153 { 154 comm_init(); 155 check_handle(xyt_handle); 156 157 /* need to copy b into x? */ 158 if (b) 159 {rvec_copy(x,b,xyt_handle->mvi->n);} 160 do_xyt_solve(xyt_handle,x); 161 162 return(0); 163 } 164 165 166 /*************************************xyt.c************************************ 167 Function: XYT_free() 168 169 Input : 170 Output: 171 Return: 172 Description: 173 **************************************xyt.c***********************************/ 174 int 175 XYT_free(xyt_ADT xyt_handle) 176 { 177 comm_init(); 178 check_handle(xyt_handle); 179 n_xyt_handles--; 180 181 free(xyt_handle->info->nsep); 182 free(xyt_handle->info->lnsep); 183 free(xyt_handle->info->fo); 184 free(xyt_handle->info->stages); 185 free(xyt_handle->info->solve_uu); 186 free(xyt_handle->info->solve_w); 187 free(xyt_handle->info->x); 188 free(xyt_handle->info->xcol_vals); 189 free(xyt_handle->info->xcol_sz); 190 free(xyt_handle->info->xcol_indices); 191 free(xyt_handle->info->y); 192 free(xyt_handle->info->ycol_vals); 193 free(xyt_handle->info->ycol_sz); 194 free(xyt_handle->info->ycol_indices); 195 free(xyt_handle->info); 196 free(xyt_handle->mvi->local2global); 197 gs_free(xyt_handle->mvi->gs_handle); 198 free(xyt_handle->mvi); 199 free(xyt_handle); 200 201 202 /* if the check fails we nuke */ 203 /* if NULL pointer passed to free we nuke */ 204 /* if the calls to free fail that's not my problem */ 205 return(0); 206 } 207 208 209 210 /*************************************xyt.c************************************ 211 Function: 212 213 Input : 214 Output: 215 Return: 216 Description: 217 **************************************xyt.c***********************************/ 218 int 219 XYT_stats(xyt_ADT xyt_handle) 220 { 221 int op[] = {NON_UNIFORM,GL_MIN,GL_MAX,GL_ADD,GL_MIN,GL_MAX,GL_ADD,GL_MIN,GL_MAX,GL_ADD}; 222 int fop[] = {NON_UNIFORM,GL_MIN,GL_MAX,GL_ADD}; 223 int vals[9], work[9]; 224 PetscScalar fvals[3], fwork[3]; 225 226 227 comm_init(); 228 check_handle(xyt_handle); 229 230 /* if factorization not done there are no stats */ 231 if (!xyt_handle->info||!xyt_handle->mvi) 232 { 233 if (!my_id) 234 {printf("XYT_stats() :: no stats available!\n");} 235 return 1; 236 } 237 238 vals[0]=vals[1]=vals[2]=xyt_handle->info->nnz; 239 vals[3]=vals[4]=vals[5]=xyt_handle->mvi->n; 240 vals[6]=vals[7]=vals[8]=xyt_handle->info->msg_buf_sz; 241 giop(vals,work,sizeof(op)/sizeof(op[0])-1,op); 242 243 fvals[0]=fvals[1]=fvals[2] 244 =xyt_handle->info->tot_solve_time/xyt_handle->info->nsolves++; 245 grop(fvals,fwork,sizeof(fop)/sizeof(fop[0])-1,fop); 246 247 if (!my_id) 248 { 249 printf("%d :: min xyt_nnz=%d\n",my_id,vals[0]); 250 printf("%d :: max xyt_nnz=%d\n",my_id,vals[1]); 251 printf("%d :: avg xyt_nnz=%g\n",my_id,1.0*vals[2]/num_nodes); 252 printf("%d :: tot xyt_nnz=%d\n",my_id,vals[2]); 253 printf("%d :: xyt C(2d) =%g\n",my_id,vals[2]/(pow(1.0*vals[5],1.5))); 254 printf("%d :: xyt C(3d) =%g\n",my_id,vals[2]/(pow(1.0*vals[5],1.6667))); 255 printf("%d :: min xyt_n =%d\n",my_id,vals[3]); 256 printf("%d :: max xyt_n =%d\n",my_id,vals[4]); 257 printf("%d :: avg xyt_n =%g\n",my_id,1.0*vals[5]/num_nodes); 258 printf("%d :: tot xyt_n =%d\n",my_id,vals[5]); 259 printf("%d :: min xyt_buf=%d\n",my_id,vals[6]); 260 printf("%d :: max xyt_buf=%d\n",my_id,vals[7]); 261 printf("%d :: avg xyt_buf=%g\n",my_id,1.0*vals[8]/num_nodes); 262 printf("%d :: min xyt_slv=%g\n",my_id,fvals[0]); 263 printf("%d :: max xyt_slv=%g\n",my_id,fvals[1]); 264 printf("%d :: avg xyt_slv=%g\n",my_id,fvals[2]/num_nodes); 265 } 266 267 return(0); 268 } 269 270 271 /*************************************xyt.c************************************ 272 Function: do_xyt_factor 273 274 Input : 275 Output: 276 Return: 277 Description: get A_local, local portion of global coarse matrix which 278 is a row dist. nxm matrix w/ n<m. 279 o my_ml holds address of ML struct associated w/A_local and coarse grid 280 o local2global holds global number of column i (i=0,...,m-1) 281 o local2global holds global number of row i (i=0,...,n-1) 282 o mylocmatvec performs A_local . vec_local (note that gs is performed using 283 gs_init/gop). 284 285 mylocmatvec = my_ml->Amat[grid_tag].matvec->external; 286 mylocmatvec (void :: void *data, double *in, double *out) 287 **************************************xyt.c***********************************/ 288 static 289 int 290 do_xyt_factor(xyt_ADT xyt_handle) 291 { 292 int flag; 293 294 295 flag=xyt_generate(xyt_handle); 296 return(flag); 297 } 298 299 300 /*************************************xyt.c************************************ 301 Function: 302 303 Input : 304 Output: 305 Return: 306 Description: 307 **************************************xyt.c***********************************/ 308 static 309 int 310 xyt_generate(xyt_ADT xyt_handle) 311 { 312 int i,j,k,idx; 313 int dim, col; 314 PetscScalar *u, *uu, *v, *z, *w, alpha, alpha_w; 315 int *segs; 316 int op[] = {GL_ADD,0}; 317 int off, len; 318 PetscScalar *x_ptr, *y_ptr; 319 int *iptr, flag; 320 int start=0, end, work; 321 int op2[] = {GL_MIN,0}; 322 gs_ADT gs_handle; 323 int *nsep, *lnsep, *fo; 324 int a_n=xyt_handle->mvi->n; 325 int a_m=xyt_handle->mvi->m; 326 int *a_local2global=xyt_handle->mvi->local2global; 327 int level; 328 int n, m; 329 int *xcol_sz, *xcol_indices, *stages; 330 PetscScalar **xcol_vals, *x; 331 int *ycol_sz, *ycol_indices; 332 PetscScalar **ycol_vals, *y; 333 int n_global; 334 int xt_nnz=0, xt_max_nnz=0; 335 int yt_nnz=0, yt_max_nnz=0; 336 int xt_zero_nnz =0; 337 int xt_zero_nnz_0=0; 338 int yt_zero_nnz =0; 339 int yt_zero_nnz_0=0; 340 PetscBLASInt i1 = 1; 341 PetscScalar dm1 = -1.0; 342 343 n=xyt_handle->mvi->n; 344 nsep=xyt_handle->info->nsep; 345 lnsep=xyt_handle->info->lnsep; 346 fo=xyt_handle->info->fo; 347 end=lnsep[0]; 348 level=xyt_handle->level; 349 gs_handle=xyt_handle->mvi->gs_handle; 350 351 /* is there a null space? */ 352 /* LATER add in ability to detect null space by checking alpha */ 353 for (i=0, j=0; i<=level; i++) 354 {j+=nsep[i];} 355 356 m = j-xyt_handle->ns; 357 if (m!=j) 358 {printf("xyt_generate() :: null space exists %d %d %d\n",m,j,xyt_handle->ns);} 359 360 error_msg_warning("xyt_generate() :: X(%d,%d)\n",n,m); 361 362 /* get and initialize storage for x local */ 363 /* note that x local is nxm and stored by columns */ 364 xcol_sz = (int*) malloc(m*sizeof(PetscInt)); 365 xcol_indices = (int*) malloc((2*m+1)*sizeof(int)); 366 xcol_vals = (PetscScalar **) malloc(m*sizeof(PetscScalar *)); 367 for (i=j=0; i<m; i++, j+=2) 368 { 369 xcol_indices[j]=xcol_indices[j+1]=xcol_sz[i]=-1; 370 xcol_vals[i] = NULL; 371 } 372 xcol_indices[j]=-1; 373 374 /* get and initialize storage for y local */ 375 /* note that y local is nxm and stored by columns */ 376 ycol_sz = (int*) malloc(m*sizeof(PetscInt)); 377 ycol_indices = (int*) malloc((2*m+1)*sizeof(int)); 378 ycol_vals = (PetscScalar **) malloc(m*sizeof(PetscScalar *)); 379 for (i=j=0; i<m; i++, j+=2) 380 { 381 ycol_indices[j]=ycol_indices[j+1]=ycol_sz[i]=-1; 382 ycol_vals[i] = NULL; 383 } 384 ycol_indices[j]=-1; 385 386 /* size of separators for each sub-hc working from bottom of tree to top */ 387 /* this looks like nsep[]=segments */ 388 stages = (int*) malloc((level+1)*sizeof(PetscInt)); 389 segs = (int*) malloc((level+1)*sizeof(PetscInt)); 390 ivec_zero(stages,level+1); 391 ivec_copy(segs,nsep,level+1); 392 for (i=0; i<level; i++) 393 {segs[i+1] += segs[i];} 394 stages[0] = segs[0]; 395 396 /* temporary vectors */ 397 u = (PetscScalar *) malloc(n*sizeof(PetscScalar)); 398 z = (PetscScalar *) malloc(n*sizeof(PetscScalar)); 399 v = (PetscScalar *) malloc(a_m*sizeof(PetscScalar)); 400 uu = (PetscScalar *) malloc(m*sizeof(PetscScalar)); 401 w = (PetscScalar *) malloc(m*sizeof(PetscScalar)); 402 403 /* extra nnz due to replication of vertices across separators */ 404 for (i=1, j=0; i<=level; i++) 405 {j+=nsep[i];} 406 407 /* storage for sparse x values */ 408 n_global = xyt_handle->info->n_global; 409 xt_max_nnz = yt_max_nnz = (int)(2.5*pow(1.0*n_global,1.6667) + j*n/2)/num_nodes; 410 x = (PetscScalar *) malloc(xt_max_nnz*sizeof(PetscScalar)); 411 y = (PetscScalar *) malloc(yt_max_nnz*sizeof(PetscScalar)); 412 413 /* LATER - can embed next sep to fire in gs */ 414 /* time to make the donuts - generate X factor */ 415 for (dim=i=j=0;i<m;i++) 416 { 417 /* time to move to the next level? */ 418 while (i==segs[dim]) 419 { 420 if (dim==level) 421 {error_msg_fatal("dim about to exceed level\n"); break;} 422 423 stages[dim++]=i; 424 end+=lnsep[dim]; 425 } 426 stages[dim]=i; 427 428 /* which column are we firing? */ 429 /* i.e. set v_l */ 430 /* use new seps and do global min across hc to determine which one to fire */ 431 (start<end) ? (col=fo[start]) : (col=INT_MAX); 432 giop_hc(&col,&work,1,op2,dim); 433 434 /* shouldn't need this */ 435 if (col==INT_MAX) 436 { 437 error_msg_warning("hey ... col==INT_MAX??\n"); 438 continue; 439 } 440 441 /* do I own it? I should */ 442 rvec_zero(v ,a_m); 443 if (col==fo[start]) 444 { 445 start++; 446 idx=ivec_linear_search(col, a_local2global, a_n); 447 if (idx!=-1) 448 {v[idx] = 1.0; j++;} 449 else 450 {error_msg_fatal("NOT FOUND!\n");} 451 } 452 else 453 { 454 idx=ivec_linear_search(col, a_local2global, a_m); 455 if (idx!=-1) 456 {v[idx] = 1.0;} 457 } 458 459 /* perform u = A.v_l */ 460 rvec_zero(u,n); 461 do_matvec(xyt_handle->mvi,v,u); 462 463 /* uu = X^T.u_l (local portion) */ 464 /* technically only need to zero out first i entries */ 465 /* later turn this into an XYT_solve call ? */ 466 rvec_zero(uu,m); 467 y_ptr=y; 468 iptr = ycol_indices; 469 for (k=0; k<i; k++) 470 { 471 off = *iptr++; 472 len = *iptr++; 473 474 uu[k] = BLASdot_(&len,u+off,&i1,y_ptr,&i1); 475 y_ptr+=len; 476 } 477 478 /* uu = X^T.u_l (comm portion) */ 479 ssgl_radd (uu, w, dim, stages); 480 481 /* z = X.uu */ 482 rvec_zero(z,n); 483 x_ptr=x; 484 iptr = xcol_indices; 485 for (k=0; k<i; k++) 486 { 487 off = *iptr++; 488 len = *iptr++; 489 490 BLASaxpy_(&len,&uu[k],x_ptr,&i1,z+off,&i1); 491 x_ptr+=len; 492 } 493 494 /* compute v_l = v_l - z */ 495 rvec_zero(v+a_n,a_m-a_n); 496 BLASaxpy_(&n,&dm1,z,&i1,v,&i1); 497 498 /* compute u_l = A.v_l */ 499 if (a_n!=a_m) 500 {gs_gop_hc(gs_handle,v,"+\0",dim);} 501 rvec_zero(u,n); 502 do_matvec(xyt_handle->mvi,v,u); 503 504 /* compute sqrt(alpha) = sqrt(u_l^T.u_l) - local portion */ 505 alpha = BLASdot_(&n,u,&i1,u,&i1); 506 /* compute sqrt(alpha) = sqrt(u_l^T.u_l) - comm portion */ 507 grop_hc(&alpha, &alpha_w, 1, op, dim); 508 509 alpha = (PetscScalar) sqrt((double)alpha); 510 511 /* check for small alpha */ 512 /* LATER use this to detect and determine null space */ 513 if (fabs(alpha)<1.0e-14) 514 {error_msg_fatal("bad alpha! %g\n",alpha);} 515 516 /* compute v_l = v_l/sqrt(alpha) */ 517 rvec_scale(v,1.0/alpha,n); 518 rvec_scale(u,1.0/alpha,n); 519 520 /* add newly generated column, v_l, to X */ 521 flag = 1; 522 off=len=0; 523 for (k=0; k<n; k++) 524 { 525 if (v[k]!=0.0) 526 { 527 len=k; 528 if (flag) 529 {off=k; flag=0;} 530 } 531 } 532 533 len -= (off-1); 534 535 if (len>0) 536 { 537 if ((xt_nnz+len)>xt_max_nnz) 538 { 539 error_msg_warning("increasing space for X by 2x!\n"); 540 xt_max_nnz *= 2; 541 x_ptr = (PetscScalar *) malloc(xt_max_nnz*sizeof(PetscScalar)); 542 rvec_copy(x_ptr,x,xt_nnz); 543 free(x); 544 x = x_ptr; 545 x_ptr+=xt_nnz; 546 } 547 xt_nnz += len; 548 rvec_copy(x_ptr,v+off,len); 549 550 /* keep track of number of zeros */ 551 if (dim) 552 { 553 for (k=0; k<len; k++) 554 { 555 if (x_ptr[k]==0.0) 556 {xt_zero_nnz++;} 557 } 558 } 559 else 560 { 561 for (k=0; k<len; k++) 562 { 563 if (x_ptr[k]==0.0) 564 {xt_zero_nnz_0++;} 565 } 566 } 567 xcol_indices[2*i] = off; 568 xcol_sz[i] = xcol_indices[2*i+1] = len; 569 xcol_vals[i] = x_ptr; 570 } 571 else 572 { 573 xcol_indices[2*i] = 0; 574 xcol_sz[i] = xcol_indices[2*i+1] = 0; 575 xcol_vals[i] = x_ptr; 576 } 577 578 579 /* add newly generated column, u_l, to Y */ 580 flag = 1; 581 off=len=0; 582 for (k=0; k<n; k++) 583 { 584 if (u[k]!=0.0) 585 { 586 len=k; 587 if (flag) 588 {off=k; flag=0;} 589 } 590 } 591 592 len -= (off-1); 593 594 if (len>0) 595 { 596 if ((yt_nnz+len)>yt_max_nnz) 597 { 598 error_msg_warning("increasing space for Y by 2x!\n"); 599 yt_max_nnz *= 2; 600 y_ptr = (PetscScalar *) malloc(yt_max_nnz*sizeof(PetscScalar)); 601 rvec_copy(y_ptr,y,yt_nnz); 602 free(y); 603 y = y_ptr; 604 y_ptr+=yt_nnz; 605 } 606 yt_nnz += len; 607 rvec_copy(y_ptr,u+off,len); 608 609 /* keep track of number of zeros */ 610 if (dim) 611 { 612 for (k=0; k<len; k++) 613 { 614 if (y_ptr[k]==0.0) 615 {yt_zero_nnz++;} 616 } 617 } 618 else 619 { 620 for (k=0; k<len; k++) 621 { 622 if (y_ptr[k]==0.0) 623 {yt_zero_nnz_0++;} 624 } 625 } 626 ycol_indices[2*i] = off; 627 ycol_sz[i] = ycol_indices[2*i+1] = len; 628 ycol_vals[i] = y_ptr; 629 } 630 else 631 { 632 ycol_indices[2*i] = 0; 633 ycol_sz[i] = ycol_indices[2*i+1] = 0; 634 ycol_vals[i] = y_ptr; 635 } 636 } 637 638 /* close off stages for execution phase */ 639 while (dim!=level) 640 { 641 stages[dim++]=i; 642 error_msg_warning("disconnected!!! dim(%d)!=level(%d)\n",dim,level); 643 } 644 stages[dim]=i; 645 646 xyt_handle->info->n=xyt_handle->mvi->n; 647 xyt_handle->info->m=m; 648 xyt_handle->info->nnz=xt_nnz + yt_nnz; 649 xyt_handle->info->max_nnz=xt_max_nnz + yt_max_nnz; 650 xyt_handle->info->msg_buf_sz=stages[level]-stages[0]; 651 xyt_handle->info->solve_uu = (PetscScalar *) malloc(m*sizeof(PetscScalar)); 652 xyt_handle->info->solve_w = (PetscScalar *) malloc(m*sizeof(PetscScalar)); 653 xyt_handle->info->x=x; 654 xyt_handle->info->xcol_vals=xcol_vals; 655 xyt_handle->info->xcol_sz=xcol_sz; 656 xyt_handle->info->xcol_indices=xcol_indices; 657 xyt_handle->info->stages=stages; 658 xyt_handle->info->y=y; 659 xyt_handle->info->ycol_vals=ycol_vals; 660 xyt_handle->info->ycol_sz=ycol_sz; 661 xyt_handle->info->ycol_indices=ycol_indices; 662 663 free(segs); 664 free(u); 665 free(v); 666 free(uu); 667 free(z); 668 free(w); 669 670 return(0); 671 } 672 673 674 /*************************************xyt.c************************************ 675 Function: 676 677 Input : 678 Output: 679 Return: 680 Description: 681 **************************************xyt.c***********************************/ 682 static PetscErrorCode do_xyt_solve(xyt_ADT xyt_handle, PetscScalar *uc) 683 { 684 int off, len, *iptr; 685 int level =xyt_handle->level; 686 int n =xyt_handle->info->n; 687 int m =xyt_handle->info->m; 688 int *stages =xyt_handle->info->stages; 689 int *xcol_indices=xyt_handle->info->xcol_indices; 690 int *ycol_indices=xyt_handle->info->ycol_indices; 691 PetscScalar *x_ptr, *y_ptr, *uu_ptr; 692 PetscScalar *solve_uu=xyt_handle->info->solve_uu; 693 PetscScalar *solve_w =xyt_handle->info->solve_w; 694 PetscScalar *x =xyt_handle->info->x; 695 PetscScalar *y =xyt_handle->info->y; 696 PetscBLASInt i1 = 1; 697 698 PetscFunctionBegin; 699 uu_ptr=solve_uu; 700 rvec_zero(uu_ptr,m); 701 702 /* x = X.Y^T.b */ 703 /* uu = Y^T.b */ 704 for (y_ptr=y,iptr=ycol_indices; *iptr!=-1; y_ptr+=len) 705 { 706 off=*iptr++; len=*iptr++; 707 *uu_ptr++ = BLASdot_(&len,uc+off,&i1,y_ptr,&i1); 708 } 709 710 /* comunication of beta */ 711 uu_ptr=solve_uu; 712 if (level) {ssgl_radd(uu_ptr, solve_w, level, stages);} 713 714 rvec_zero(uc,n); 715 716 /* x = X.uu */ 717 for (x_ptr=x,iptr=xcol_indices; *iptr!=-1; x_ptr+=len) 718 { 719 off=*iptr++; len=*iptr++; 720 BLASaxpy_(&len,uu_ptr++,x_ptr,&i1,uc+off,&i1); 721 } 722 PetscFunctionReturn(0); 723 } 724 725 726 /*************************************xyt.c************************************ 727 Function: check_handle() 728 729 Input : 730 Output: 731 Return: 732 Description: 733 **************************************xyt.c***********************************/ 734 static PetscErrorCode check_handle(xyt_ADT xyt_handle) 735 { 736 int vals[2], work[2], op[] = {NON_UNIFORM,GL_MIN,GL_MAX}; 737 738 PetscFunctionBegin; 739 if (xyt_handle==NULL) 740 {error_msg_fatal("check_handle() :: bad handle :: NULL %d\n",xyt_handle);} 741 742 vals[0]=vals[1]=xyt_handle->id; 743 giop(vals,work,sizeof(op)/sizeof(op[0])-1,op); 744 if ((vals[0]!=vals[1])||(xyt_handle->id<=0)) 745 {error_msg_fatal("check_handle() :: bad handle :: id mismatch min/max %d/%d %d\n", 746 vals[0],vals[1], xyt_handle->id);} 747 PetscFunctionReturn(0); 748 } 749 750 751 /*************************************xyt.c************************************ 752 Function: det_separators 753 754 Input : 755 Output: 756 Return: 757 Description: 758 det_separators(xyt_handle, local2global, n, m, mylocmatvec, grid_data); 759 **************************************xyt.c***********************************/ 760 static PetscErrorCode det_separators(xyt_ADT xyt_handle) 761 { 762 int i, ct, id; 763 int mask, edge, *iptr; 764 int *dir, *used; 765 int sum[4], w[4]; 766 PetscScalar rsum[4], rw[4]; 767 int op[] = {GL_ADD,0}; 768 PetscScalar *lhs, *rhs; 769 int *nsep, *lnsep, *fo, nfo=0; 770 gs_ADT gs_handle=xyt_handle->mvi->gs_handle; 771 int *local2global=xyt_handle->mvi->local2global; 772 int n=xyt_handle->mvi->n; 773 int m=xyt_handle->mvi->m; 774 int level=xyt_handle->level; 775 int shared=FALSE; 776 777 PetscFunctionBegin; 778 dir = (int*)malloc(sizeof(PetscInt)*(level+1)); 779 nsep = (int*)malloc(sizeof(PetscInt)*(level+1)); 780 lnsep= (int*)malloc(sizeof(PetscInt)*(level+1)); 781 fo = (int*)malloc(sizeof(PetscInt)*(n+1)); 782 used = (int*)malloc(sizeof(PetscInt)*n); 783 784 ivec_zero(dir ,level+1); 785 ivec_zero(nsep ,level+1); 786 ivec_zero(lnsep,level+1); 787 ivec_set (fo ,-1,n+1); 788 ivec_zero(used,n); 789 790 lhs = (double*)malloc(sizeof(PetscScalar)*m); 791 rhs = (double*)malloc(sizeof(PetscScalar)*m); 792 793 /* determine the # of unique dof */ 794 rvec_zero(lhs,m); 795 rvec_set(lhs,1.0,n); 796 gs_gop_hc(gs_handle,lhs,"+\0",level); 797 error_msg_warning("done first gs_gop_hc\n"); 798 rvec_zero(rsum,2); 799 for (ct=i=0;i<n;i++) 800 { 801 if (lhs[i]!=0.0) 802 {rsum[0]+=1.0/lhs[i]; rsum[1]+=lhs[i];} 803 804 if (lhs[i]!=1.0) 805 { 806 shared=TRUE; 807 } 808 } 809 810 grop_hc(rsum,rw,2,op,level); 811 rsum[0]+=0.1; 812 rsum[1]+=0.1; 813 814 /* 815 if (!my_id) 816 { 817 printf("xyt n unique = %d (%g)\n",(int) rsum[0], rsum[0]); 818 printf("xyt n shared = %d (%g)\n",(int) rsum[1], rsum[1]); 819 } 820 */ 821 822 xyt_handle->info->n_global=xyt_handle->info->m_global=(int) rsum[0]; 823 xyt_handle->mvi->n_global =xyt_handle->mvi->m_global =(int) rsum[0]; 824 825 /* determine separator sets top down */ 826 if (shared) 827 { 828 /* solution is to do as in the symmetric shared case but then */ 829 /* pick the sub-hc with the most free dofs and do a mat-vec */ 830 /* and pick up the responses on the other sub-hc from the */ 831 /* initial separator set obtained from the symm. shared case */ 832 error_msg_fatal("shared dof separator determination not ready ... see hmt!!!\n"); 833 for (iptr=fo+n,id=my_id,mask=num_nodes>>1,edge=level;edge>0;edge--,mask>>=1) 834 { 835 /* set rsh of hc, fire, and collect lhs responses */ 836 (id<mask) ? rvec_zero(lhs,m) : rvec_set(lhs,1.0,m); 837 gs_gop_hc(gs_handle,lhs,"+\0",edge); 838 839 /* set lsh of hc, fire, and collect rhs responses */ 840 (id<mask) ? rvec_set(rhs,1.0,m) : rvec_zero(rhs,m); 841 gs_gop_hc(gs_handle,rhs,"+\0",edge); 842 843 for (i=0;i<n;i++) 844 { 845 if (id< mask) 846 { 847 if (lhs[i]!=0.0) 848 {lhs[i]=1.0;} 849 } 850 if (id>=mask) 851 { 852 if (rhs[i]!=0.0) 853 {rhs[i]=1.0;} 854 } 855 } 856 857 if (id< mask) 858 {gs_gop_hc(gs_handle,lhs,"+\0",edge-1);} 859 else 860 {gs_gop_hc(gs_handle,rhs,"+\0",edge-1);} 861 862 /* count number of dofs I own that have signal and not in sep set */ 863 rvec_zero(rsum,4); 864 for (ivec_zero(sum,4),ct=i=0;i<n;i++) 865 { 866 if (!used[i]) 867 { 868 /* number of unmarked dofs on node */ 869 ct++; 870 /* number of dofs to be marked on lhs hc */ 871 if (id< mask) 872 { 873 if (lhs[i]!=0.0) 874 {sum[0]++; rsum[0]+=1.0/lhs[i];} 875 } 876 /* number of dofs to be marked on rhs hc */ 877 if (id>=mask) 878 { 879 if (rhs[i]!=0.0) 880 {sum[1]++; rsum[1]+=1.0/rhs[i];} 881 } 882 } 883 } 884 885 /* go for load balance - choose half with most unmarked dofs, bias LHS */ 886 (id<mask) ? (sum[2]=ct) : (sum[3]=ct); 887 (id<mask) ? (rsum[2]=ct) : (rsum[3]=ct); 888 giop_hc(sum,w,4,op,edge); 889 grop_hc(rsum,rw,4,op,edge); 890 rsum[0]+=0.1; rsum[1]+=0.1; rsum[2]+=0.1; rsum[3]+=0.1; 891 892 if (id<mask) 893 { 894 /* mark dofs I own that have signal and not in sep set */ 895 for (ct=i=0;i<n;i++) 896 { 897 if ((!used[i])&&(lhs[i]!=0.0)) 898 { 899 ct++; nfo++; 900 901 if (nfo>n) 902 {error_msg_fatal("nfo about to exceed n\n");} 903 904 *--iptr = local2global[i]; 905 used[i]=edge; 906 } 907 } 908 if (ct>1) {ivec_sort(iptr,ct);} 909 910 lnsep[edge]=ct; 911 nsep[edge]=(int) rsum[0]; 912 dir [edge]=LEFT; 913 } 914 915 if (id>=mask) 916 { 917 /* mark dofs I own that have signal and not in sep set */ 918 for (ct=i=0;i<n;i++) 919 { 920 if ((!used[i])&&(rhs[i]!=0.0)) 921 { 922 ct++; nfo++; 923 924 if (nfo>n) 925 {error_msg_fatal("nfo about to exceed n\n");} 926 927 *--iptr = local2global[i]; 928 used[i]=edge; 929 } 930 } 931 if (ct>1) {ivec_sort(iptr,ct);} 932 933 lnsep[edge]=ct; 934 nsep[edge]= (int) rsum[1]; 935 dir [edge]=RIGHT; 936 } 937 938 /* LATER or we can recur on these to order seps at this level */ 939 /* do we need full set of separators for this? */ 940 941 /* fold rhs hc into lower */ 942 if (id>=mask) 943 {id-=mask;} 944 } 945 } 946 else 947 { 948 for (iptr=fo+n,id=my_id,mask=num_nodes>>1,edge=level;edge>0;edge--,mask>>=1) 949 { 950 /* set rsh of hc, fire, and collect lhs responses */ 951 (id<mask) ? rvec_zero(lhs,m) : rvec_set(lhs,1.0,m); 952 gs_gop_hc(gs_handle,lhs,"+\0",edge); 953 954 /* set lsh of hc, fire, and collect rhs responses */ 955 (id<mask) ? rvec_set(rhs,1.0,m) : rvec_zero(rhs,m); 956 gs_gop_hc(gs_handle,rhs,"+\0",edge); 957 958 /* count number of dofs I own that have signal and not in sep set */ 959 for (ivec_zero(sum,4),ct=i=0;i<n;i++) 960 { 961 if (!used[i]) 962 { 963 /* number of unmarked dofs on node */ 964 ct++; 965 /* number of dofs to be marked on lhs hc */ 966 if ((id< mask)&&(lhs[i]!=0.0)) {sum[0]++;} 967 /* number of dofs to be marked on rhs hc */ 968 if ((id>=mask)&&(rhs[i]!=0.0)) {sum[1]++;} 969 } 970 } 971 972 /* for the non-symmetric case we need separators of width 2 */ 973 /* so take both sides */ 974 (id<mask) ? (sum[2]=ct) : (sum[3]=ct); 975 giop_hc(sum,w,4,op,edge); 976 977 ct=0; 978 if (id<mask) 979 { 980 /* mark dofs I own that have signal and not in sep set */ 981 for (i=0;i<n;i++) 982 { 983 if ((!used[i])&&(lhs[i]!=0.0)) 984 { 985 ct++; nfo++; 986 *--iptr = local2global[i]; 987 used[i]=edge; 988 } 989 } 990 /* LSH hc summation of ct should be sum[0] */ 991 } 992 else 993 { 994 /* mark dofs I own that have signal and not in sep set */ 995 for (i=0;i<n;i++) 996 { 997 if ((!used[i])&&(rhs[i]!=0.0)) 998 { 999 ct++; nfo++; 1000 *--iptr = local2global[i]; 1001 used[i]=edge; 1002 } 1003 } 1004 /* RSH hc summation of ct should be sum[1] */ 1005 } 1006 1007 if (ct>1) {ivec_sort(iptr,ct);} 1008 lnsep[edge]=ct; 1009 nsep[edge]=sum[0]+sum[1]; 1010 dir [edge]=BOTH; 1011 1012 /* LATER or we can recur on these to order seps at this level */ 1013 /* do we need full set of separators for this? */ 1014 1015 /* fold rhs hc into lower */ 1016 if (id>=mask) 1017 {id-=mask;} 1018 } 1019 } 1020 1021 /* level 0 is on processor case - so mark the remainder */ 1022 for (ct=i=0;i<n;i++) 1023 { 1024 if (!used[i]) 1025 { 1026 ct++; nfo++; 1027 *--iptr = local2global[i]; 1028 used[i]=edge; 1029 } 1030 } 1031 if (ct>1) {ivec_sort(iptr,ct);} 1032 lnsep[edge]=ct; 1033 nsep [edge]=ct; 1034 dir [edge]=BOTH; 1035 1036 xyt_handle->info->nsep=nsep; 1037 xyt_handle->info->lnsep=lnsep; 1038 xyt_handle->info->fo=fo; 1039 xyt_handle->info->nfo=nfo; 1040 1041 free(dir); 1042 free(lhs); 1043 free(rhs); 1044 free(used); 1045 PetscFunctionReturn(0); 1046 } 1047 1048 1049 /*************************************xyt.c************************************ 1050 Function: set_mvi 1051 1052 Input : 1053 Output: 1054 Return: 1055 Description: 1056 **************************************xyt.c***********************************/ 1057 static 1058 mv_info *set_mvi(int *local2global, int n, int m, void *matvec, void *grid_data) 1059 { 1060 mv_info *mvi; 1061 1062 1063 mvi = (mv_info*)malloc(sizeof(mv_info)); 1064 mvi->n=n; 1065 mvi->m=m; 1066 mvi->n_global=-1; 1067 mvi->m_global=-1; 1068 mvi->local2global=(int*)malloc((m+1)*sizeof(PetscInt)); 1069 ivec_copy(mvi->local2global,local2global,m); 1070 mvi->local2global[m] = INT_MAX; 1071 mvi->matvec=(PetscErrorCode (*)(mv_info*,PetscScalar*,PetscScalar*))matvec; 1072 mvi->grid_data=grid_data; 1073 1074 /* set xyt communication handle to perform restricted matvec */ 1075 mvi->gs_handle = gs_init(local2global, m, num_nodes); 1076 1077 return(mvi); 1078 } 1079 1080 1081 /*************************************xyt.c************************************ 1082 Function: set_mvi 1083 1084 Input : 1085 Output: 1086 Return: 1087 Description: 1088 1089 computes u = A.v 1090 do_matvec(xyt_handle->mvi,v,u); 1091 **************************************xyt.c***********************************/ 1092 static PetscErrorCode do_matvec(mv_info *A, PetscScalar *v, PetscScalar *u) 1093 { 1094 PetscFunctionBegin; 1095 A->matvec((mv_info*)A->grid_data,v,u); 1096 PetscFunctionReturn(0); 1097 } 1098 1099 1100 1101