111d22bbfSJunchao Zhang #include <petscvec_kokkos.hpp> 2076ba34aSJunchao Zhang #include <petscsf.h> 342550becSJunchao Zhang #include <petsc/private/sfimpl.h> 48c3ff71bSJunchao Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h> 542550becSJunchao Zhang #include <../src/mat/impls/aij/mpi/kokkos/mpiaijkok.hpp> 6076ba34aSJunchao Zhang #include <KokkosSparse_spadd.hpp> 711d22bbfSJunchao Zhang 8d71ae5a4SJacob Faibussowitsch PetscErrorCode MatAssemblyEnd_MPIAIJKokkos(Mat A, MatAssemblyType mode) 9d71ae5a4SJacob Faibussowitsch { 105519a089SJose E. Roman Mat_SeqAIJKokkos *aijkok; 1130203840SJunchao Zhang Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ *)A->data; 128c3ff71bSJunchao Zhang 138c3ff71bSJunchao Zhang PetscFunctionBegin; 149566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd_MPIAIJ(A, mode)); 1530203840SJunchao Zhang /* E.g., MatCreateSubMatrix() calls MatCreateMPIAIJWithSeqAIJ(comm,A,B,..), which creates Bnew of SEQAIJ and destroys B of SEQAIJKOKKOS. 1630203840SJunchao Zhang Thus we finalize A/B/lvec's type in MatAssemblyEnd() to handle various cases. 1730203840SJunchao Zhang */ 1830203840SJunchao Zhang if (mode == MAT_FINAL_ASSEMBLY) { 1930203840SJunchao Zhang PetscCall(MatSetType(mpiaij->A, MATSEQAIJKOKKOS)); 2030203840SJunchao Zhang PetscCall(MatSetType(mpiaij->B, MATSEQAIJKOKKOS)); 2130203840SJunchao Zhang PetscCall(VecSetType(mpiaij->lvec, VECSEQKOKKOS)); 2230203840SJunchao Zhang } 235519a089SJose E. Roman aijkok = static_cast<Mat_SeqAIJKokkos *>(((Mat_MPIAIJ *)A->data)->A->spptr); /* Access spptr after MatAssemblyEnd_MPIAIJ(), which might have deleted old spptr */ 24a587d139SMark if (aijkok && aijkok->device_mat_d.data()) { 25a587d139SMark A->offloadmask = PETSC_OFFLOAD_GPU; // in GPU mode, no going back. MatSetValues checks this 26a587d139SMark } 27a587d139SMark 28*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 298c3ff71bSJunchao Zhang } 308c3ff71bSJunchao Zhang 31d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMPIAIJSetPreallocation_MPIAIJKokkos(Mat mat, PetscInt d_nz, const PetscInt d_nnz[], PetscInt o_nz, const PetscInt o_nnz[]) 32d71ae5a4SJacob Faibussowitsch { 338c3ff71bSJunchao Zhang Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ *)mat->data; 348c3ff71bSJunchao Zhang 358c3ff71bSJunchao Zhang PetscFunctionBegin; 369566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->rmap)); 379566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->cmap)); 386a29ce69SStefano Zampini #if defined(PETSC_USE_DEBUG) 398c3ff71bSJunchao Zhang if (d_nnz) { 406a29ce69SStefano Zampini PetscInt i; 41ad540459SPierre Jolivet for (i = 0; i < mat->rmap->n; i++) PetscCheck(d_nnz[i] >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "d_nnz cannot be less than 0: local row %" PetscInt_FMT " value %" PetscInt_FMT, i, d_nnz[i]); 428c3ff71bSJunchao Zhang } 438c3ff71bSJunchao Zhang if (o_nnz) { 446a29ce69SStefano Zampini PetscInt i; 45ad540459SPierre Jolivet for (i = 0; i < mat->rmap->n; i++) PetscCheck(o_nnz[i] >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "o_nnz cannot be less than 0: local row %" PetscInt_FMT " value %" PetscInt_FMT, i, o_nnz[i]); 468c3ff71bSJunchao Zhang } 476a29ce69SStefano Zampini #endif 486a29ce69SStefano Zampini #if defined(PETSC_USE_CTABLE) 49eec179cfSJacob Faibussowitsch PetscCall(PetscHMapIDestroy(&mpiaij->colmap)); 506a29ce69SStefano Zampini #else 519566063dSJacob Faibussowitsch PetscCall(PetscFree(mpiaij->colmap)); 526a29ce69SStefano Zampini #endif 539566063dSJacob Faibussowitsch PetscCall(PetscFree(mpiaij->garray)); 549566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mpiaij->lvec)); 559566063dSJacob Faibussowitsch PetscCall(VecScatterDestroy(&mpiaij->Mvctx)); 566a29ce69SStefano Zampini /* Because the B will have been resized we simply destroy it and create a new one each time */ 579566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mpiaij->B)); 586a29ce69SStefano Zampini 596a29ce69SStefano Zampini if (!mpiaij->A) { 609566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &mpiaij->A)); 619566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mpiaij->A, mat->rmap->n, mat->cmap->n, mat->rmap->n, mat->cmap->n)); 626a29ce69SStefano Zampini } 636a29ce69SStefano Zampini if (!mpiaij->B) { 646a29ce69SStefano Zampini PetscMPIInt size; 659566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)mat), &size)); 669566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &mpiaij->B)); 679566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mpiaij->B, mat->rmap->n, size > 1 ? mat->cmap->N : 0, mat->rmap->n, size > 1 ? mat->cmap->N : 0)); 688c3ff71bSJunchao Zhang } 699566063dSJacob Faibussowitsch PetscCall(MatSetType(mpiaij->A, MATSEQAIJKOKKOS)); 709566063dSJacob Faibussowitsch PetscCall(MatSetType(mpiaij->B, MATSEQAIJKOKKOS)); 719566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation(mpiaij->A, d_nz, d_nnz)); 729566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation(mpiaij->B, o_nz, o_nnz)); 738c3ff71bSJunchao Zhang mat->preallocated = PETSC_TRUE; 74*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 758c3ff71bSJunchao Zhang } 768c3ff71bSJunchao Zhang 77d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMult_MPIAIJKokkos(Mat mat, Vec xx, Vec yy) 78d71ae5a4SJacob Faibussowitsch { 798c3ff71bSJunchao Zhang Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ *)mat->data; 808c3ff71bSJunchao Zhang PetscInt nt; 818c3ff71bSJunchao Zhang 828c3ff71bSJunchao Zhang PetscFunctionBegin; 839566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(xx, &nt)); 8408401ef6SPierre Jolivet PetscCheck(nt == mat->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Incompatible partition of mat (%" PetscInt_FMT ") and xx (%" PetscInt_FMT ")", mat->cmap->n, nt); 859566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(mpiaij->Mvctx, xx, mpiaij->lvec, INSERT_VALUES, SCATTER_FORWARD)); 869566063dSJacob Faibussowitsch PetscCall((*mpiaij->A->ops->mult)(mpiaij->A, xx, yy)); 879566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(mpiaij->Mvctx, xx, mpiaij->lvec, INSERT_VALUES, SCATTER_FORWARD)); 889566063dSJacob Faibussowitsch PetscCall((*mpiaij->B->ops->multadd)(mpiaij->B, mpiaij->lvec, yy, yy)); 89*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 908c3ff71bSJunchao Zhang } 918c3ff71bSJunchao Zhang 92d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMultAdd_MPIAIJKokkos(Mat mat, Vec xx, Vec yy, Vec zz) 93d71ae5a4SJacob Faibussowitsch { 948c3ff71bSJunchao Zhang Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ *)mat->data; 958c3ff71bSJunchao Zhang PetscInt nt; 968c3ff71bSJunchao Zhang 978c3ff71bSJunchao Zhang PetscFunctionBegin; 989566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(xx, &nt)); 9908401ef6SPierre Jolivet PetscCheck(nt == mat->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Incompatible partition of mat (%" PetscInt_FMT ") and xx (%" PetscInt_FMT ")", mat->cmap->n, nt); 1009566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(mpiaij->Mvctx, xx, mpiaij->lvec, INSERT_VALUES, SCATTER_FORWARD)); 1019566063dSJacob Faibussowitsch PetscCall((*mpiaij->A->ops->multadd)(mpiaij->A, xx, yy, zz)); 1029566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(mpiaij->Mvctx, xx, mpiaij->lvec, INSERT_VALUES, SCATTER_FORWARD)); 1039566063dSJacob Faibussowitsch PetscCall((*mpiaij->B->ops->multadd)(mpiaij->B, mpiaij->lvec, zz, zz)); 104*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1058c3ff71bSJunchao Zhang } 1068c3ff71bSJunchao Zhang 107d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMultTranspose_MPIAIJKokkos(Mat mat, Vec xx, Vec yy) 108d71ae5a4SJacob Faibussowitsch { 1098c3ff71bSJunchao Zhang Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ *)mat->data; 1108c3ff71bSJunchao Zhang PetscInt nt; 1118c3ff71bSJunchao Zhang 1128c3ff71bSJunchao Zhang PetscFunctionBegin; 1139566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(xx, &nt)); 11408401ef6SPierre Jolivet PetscCheck(nt == mat->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Incompatible partition of mat (%" PetscInt_FMT ") and xx (%" PetscInt_FMT ")", mat->rmap->n, nt); 1159566063dSJacob Faibussowitsch PetscCall((*mpiaij->B->ops->multtranspose)(mpiaij->B, xx, mpiaij->lvec)); 1169566063dSJacob Faibussowitsch PetscCall((*mpiaij->A->ops->multtranspose)(mpiaij->A, xx, yy)); 1179566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(mpiaij->Mvctx, mpiaij->lvec, yy, ADD_VALUES, SCATTER_REVERSE)); 1189566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(mpiaij->Mvctx, mpiaij->lvec, yy, ADD_VALUES, SCATTER_REVERSE)); 119*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1208c3ff71bSJunchao Zhang } 1218c3ff71bSJunchao Zhang 122076ba34aSJunchao Zhang /* Merge the "A, B" matrices of mat into a matrix C. mat's type is MPIAIJKOKKOS. C's type is MATSEQAIJKOKKOS. 123076ba34aSJunchao Zhang A is put before B. C's size would be A->rmap->n by (A->cmap->n + B->cmap->n). 124076ba34aSJunchao Zhang C still uses local column ids. Their corresponding global column ids are returned in glob. 125076ba34aSJunchao Zhang */ 126d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMPIAIJGetLocalMatMerge_MPIAIJKokkos(Mat mat, MatReuse reuse, IS *glob, Mat *C) 127d71ae5a4SJacob Faibussowitsch { 128076ba34aSJunchao Zhang Mat Ad, Ao; 129076ba34aSJunchao Zhang const PetscInt *cmap; 130076ba34aSJunchao Zhang 131076ba34aSJunchao Zhang PetscFunctionBegin; 1329566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetSeqAIJ(mat, &Ad, &Ao, &cmap)); 1339566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosMergeMats(Ad, Ao, reuse, C)); 134076ba34aSJunchao Zhang if (glob) { 135076ba34aSJunchao Zhang PetscInt cst, i, dn, on, *gidx; 1369566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(Ad, NULL, &dn)); 1379566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(Ao, NULL, &on)); 1389566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRangeColumn(mat, &cst, NULL)); 1399566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(dn + on, &gidx)); 140076ba34aSJunchao Zhang for (i = 0; i < dn; i++) gidx[i] = cst + i; 141076ba34aSJunchao Zhang for (i = 0; i < on; i++) gidx[i + dn] = cmap[i]; 1429566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PetscObjectComm((PetscObject)Ad), dn + on, gidx, PETSC_OWN_POINTER, glob)); 143076ba34aSJunchao Zhang } 144*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 145076ba34aSJunchao Zhang } 146076ba34aSJunchao Zhang 147076ba34aSJunchao Zhang /* Structs used in matrix product C=AB, C=A^tB and C=B^tAB */ 148076ba34aSJunchao Zhang struct MatMatStruct { 149076ba34aSJunchao Zhang MatRowMapKokkosView Cdstart; /* Used to split sequential matrix into petsc's A, B format */ 150076ba34aSJunchao Zhang PetscSF sf; /* SF to send/recv matrix entries */ 151076ba34aSJunchao Zhang MatScalarKokkosView abuf; /* buf of mat values in send/recv */ 152076ba34aSJunchao Zhang Mat C1, C2, B_local; 153076ba34aSJunchao Zhang KokkosCsrMatrix C1_global, C2_global, C_global; 154076ba34aSJunchao Zhang KernelHandle kh; 155*3ba16761SJacob Faibussowitsch MatMatStruct() noexcept : sf(nullptr), C1(nullptr), C2(nullptr), B_local(nullptr) { } 156076ba34aSJunchao Zhang 157d71ae5a4SJacob Faibussowitsch ~MatMatStruct() 158d71ae5a4SJacob Faibussowitsch { 159*3ba16761SJacob Faibussowitsch PetscFunctionBegin; 160*3ba16761SJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, MatDestroy(&C1)); 161*3ba16761SJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, MatDestroy(&C2)); 162*3ba16761SJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, MatDestroy(&B_local)); 163*3ba16761SJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, PetscSFDestroy(&sf)); 164076ba34aSJunchao Zhang kh.destroy_spadd_handle(); 165*3ba16761SJacob Faibussowitsch PetscFunctionReturnVoid(); 166076ba34aSJunchao Zhang } 167076ba34aSJunchao Zhang }; 168076ba34aSJunchao Zhang 169076ba34aSJunchao Zhang struct MatMatStruct_AB : public MatMatStruct { 170*3ba16761SJacob Faibussowitsch MatColIdxKokkosView rows{}; 171*3ba16761SJacob Faibussowitsch MatRowMapKokkosView rowoffset{}; 172*3ba16761SJacob Faibussowitsch Mat B_other{}, C_petsc{}; /* SEQAIJKOKKOS matrices. TODO: have a better var name than C_petsc */ 173076ba34aSJunchao Zhang 174*3ba16761SJacob Faibussowitsch ~MatMatStruct_AB() noexcept 175d71ae5a4SJacob Faibussowitsch { 176*3ba16761SJacob Faibussowitsch PetscFunctionBegin; 177*3ba16761SJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, MatDestroy(&B_other)); 178*3ba16761SJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, MatDestroy(&C_petsc)); 179*3ba16761SJacob Faibussowitsch PetscFunctionReturnVoid(); 180076ba34aSJunchao Zhang } 181076ba34aSJunchao Zhang }; 182076ba34aSJunchao Zhang 183076ba34aSJunchao Zhang struct MatMatStruct_AtB : public MatMatStruct { 184076ba34aSJunchao Zhang MatRowMapKokkosView srcrowoffset, dstrowoffset; 185076ba34aSJunchao Zhang }; 186076ba34aSJunchao Zhang 1879371c9d4SSatish Balay struct MatProductData_MPIAIJKokkos { 188*3ba16761SJacob Faibussowitsch MatMatStruct_AB *mmAB = nullptr; 189*3ba16761SJacob Faibussowitsch MatMatStruct_AtB *mmAtB = nullptr; 190*3ba16761SJacob Faibussowitsch PetscBool reusesym = PETSC_FALSE; 191076ba34aSJunchao Zhang 192d71ae5a4SJacob Faibussowitsch ~MatProductData_MPIAIJKokkos() 193d71ae5a4SJacob Faibussowitsch { 194076ba34aSJunchao Zhang delete mmAB; 195076ba34aSJunchao Zhang delete mmAtB; 196076ba34aSJunchao Zhang } 197076ba34aSJunchao Zhang }; 198076ba34aSJunchao Zhang 199d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductDataDestroy_MPIAIJKokkos(void *data) 200d71ae5a4SJacob Faibussowitsch { 201076ba34aSJunchao Zhang PetscFunctionBegin; 2029566063dSJacob Faibussowitsch PetscCallCXX(delete static_cast<MatProductData_MPIAIJKokkos *>(data)); 203*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 204076ba34aSJunchao Zhang } 205076ba34aSJunchao Zhang 206076ba34aSJunchao Zhang /* MatSeqAIJKokkosGetCSRMatrixWithGlobalColumnIds - Get a KokkosCsrMatrix from a MATSEQAIJKOKKOS matrix 207076ba34aSJunchao Zhang 208076ba34aSJunchao Zhang Input Parameters: 209076ba34aSJunchao Zhang + A - the MATSEQAIJKOKKOS matrix 210076ba34aSJunchao Zhang . N - new column size for the returned Kokkos matrix 211076ba34aSJunchao Zhang - l2g - a map that maps old col ids to new col ids 212076ba34aSJunchao Zhang 213076ba34aSJunchao Zhang Output Parameters: 214076ba34aSJunchao Zhang . csrmat - the Kokkos matrix, which has the same row size as A, shares a, i but not j with A. 215076ba34aSJunchao Zhang */ 216d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJKokkosGetCSRMatrixWithGlobalColumnIds(Mat A, PetscInt N, const ConstMatColIdxKokkosView &l2g, KokkosCsrMatrix &csrmat) 217d71ae5a4SJacob Faibussowitsch { 218076ba34aSJunchao Zhang KokkosCsrMatrix &orig = static_cast<Mat_SeqAIJKokkos *>(A->spptr)->csrmat; 219076ba34aSJunchao Zhang MatColIdxKokkosView jg("jg", orig.nnz()); /* New j array for csrmat */ 220076ba34aSJunchao Zhang 221076ba34aSJunchao Zhang PetscFunctionBegin; 2229371c9d4SSatish Balay PetscCallCXX(Kokkos::parallel_for( 2239371c9d4SSatish Balay orig.nnz(), KOKKOS_LAMBDA(const PetscInt i) { jg(i) = l2g(orig.graph.entries(i)); })); 2249566063dSJacob Faibussowitsch PetscCallCXX(csrmat = KokkosCsrMatrix("csrmat", orig.numRows(), N, orig.nnz(), orig.values, orig.graph.row_map, jg)); 225*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 226076ba34aSJunchao Zhang } 227076ba34aSJunchao Zhang 228076ba34aSJunchao Zhang /* MatSetMPIAIJKokkosWithSplitSeqAIJKokkosMatrices - Set the diag and offdiag matrices of a MATMPIAIJKOKKOS matrix. 229076ba34aSJunchao Zhang It is similar to MatCreateMPIAIJWithSplitArrays. 230076ba34aSJunchao Zhang 231076ba34aSJunchao Zhang Input Parameters: 232076ba34aSJunchao Zhang + mat - the MATMPIAIJKOKKOS matrix, which should have its type and layout set, but should not have its diag, offdiag matrices set 233076ba34aSJunchao Zhang . A - the diag matrix using local col ids 234076ba34aSJunchao Zhang - B - the offdiag matrix using global col ids 235076ba34aSJunchao Zhang 236076ba34aSJunchao Zhang Output Parameters: 237076ba34aSJunchao Zhang . mat - the updated MATMPIAIJKOKKOS matrix 238076ba34aSJunchao Zhang */ 239d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetMPIAIJKokkosWithSplitSeqAIJKokkosMatrices(Mat mat, Mat A, Mat B) 240d71ae5a4SJacob Faibussowitsch { 241076ba34aSJunchao Zhang Mat_MPIAIJ *mpiaij = static_cast<Mat_MPIAIJ *>(mat->data); 242076ba34aSJunchao Zhang PetscInt m, n, M, N, Am, An, Bm, Bn; 243076ba34aSJunchao Zhang Mat_SeqAIJKokkos *bkok = static_cast<Mat_SeqAIJKokkos *>(B->spptr); 244076ba34aSJunchao Zhang 245076ba34aSJunchao Zhang PetscFunctionBegin; 2469566063dSJacob Faibussowitsch PetscCall(MatGetSize(mat, &M, &N)); 2479566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(mat, &m, &n)); 2489566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &Am, &An)); 2499566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(B, &Bm, &Bn)); 250076ba34aSJunchao Zhang 251aed4548fSBarry Smith PetscCheck(m == Am && m == Bm, PETSC_COMM_SELF, PETSC_ERR_PLIB, "local number of rows do not match"); 25208401ef6SPierre Jolivet PetscCheck(n == An, PETSC_COMM_SELF, PETSC_ERR_PLIB, "local number of columns do not match"); 25308401ef6SPierre Jolivet PetscCheck(N == Bn, PETSC_COMM_SELF, PETSC_ERR_PLIB, "global number of columns do not match"); 25408401ef6SPierre Jolivet PetscCheck(!mpiaij->A && !mpiaij->B, PETSC_COMM_SELF, PETSC_ERR_PLIB, "A, B of the MPIAIJ matrix are not empty"); 255076ba34aSJunchao Zhang mpiaij->A = A; 256076ba34aSJunchao Zhang mpiaij->B = B; 257076ba34aSJunchao Zhang 258076ba34aSJunchao Zhang mat->preallocated = PETSC_TRUE; 259076ba34aSJunchao Zhang mat->nooffprocentries = PETSC_TRUE; /* See MatAssemblyBegin_MPIAIJ. In effect, making MatAssemblyBegin a nop */ 260076ba34aSJunchao Zhang 2619566063dSJacob Faibussowitsch PetscCall(MatSetOption(mat, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 2629566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mat, MAT_FINAL_ASSEMBLY)); 263076ba34aSJunchao Zhang /* MatAssemblyEnd is critical here. It sets mat->offloadmask according to A and B's, and 264076ba34aSJunchao Zhang also gets mpiaij->B compacted, with its col ids and size reduced 265076ba34aSJunchao Zhang */ 2669566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mat, MAT_FINAL_ASSEMBLY)); 2679566063dSJacob Faibussowitsch PetscCall(MatSetOption(mat, MAT_NO_OFF_PROC_ENTRIES, PETSC_FALSE)); 2689566063dSJacob Faibussowitsch PetscCall(MatSetOption(mat, MAT_NEW_NONZERO_LOCATION_ERR, PETSC_TRUE)); 269076ba34aSJunchao Zhang 270076ba34aSJunchao Zhang /* Update bkok with new local col ids (stored on host) and size */ 271076ba34aSJunchao Zhang bkok->j_dual.modify_host(); 272076ba34aSJunchao Zhang bkok->j_dual.sync_device(); 273076ba34aSJunchao Zhang bkok->SetColSize(mpiaij->B->cmap->n); 274*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 275076ba34aSJunchao Zhang } 276076ba34aSJunchao Zhang 277076ba34aSJunchao Zhang /* MatSeqAIJKokkosBcast - Bcast rows of a SEQAIJKOKKOS matrice (B) to form a SEQAIJKOKKOS matrix (C). 278076ba34aSJunchao Zhang 279076ba34aSJunchao Zhang It is essentially the MPIAIJKOKKOS counterpart of MatGetBrowsOfAoCols_MPIAIJ, but supports device and uses PetscSF. 280076ba34aSJunchao Zhang In the given ownerSF, leaves correspond to rows in C, and roots correspond to rows in B. Roots may connect to multiple leaves. 281076ba34aSJunchao Zhang Suppose C's j-th row is connected to a root identified by PetscSFNode (k,i), it means we will bcast the i-th row of B on rank k 282076ba34aSJunchao Zhang to j-th row of C. ownerSF's leaves must be contiguous (in other words, as if ilocal=NULL was used to set its graph). 283076ba34aSJunchao Zhang 284076ba34aSJunchao Zhang Collective on comm of ownerSF 285076ba34aSJunchao Zhang 286076ba34aSJunchao Zhang Input Parameters: 287076ba34aSJunchao Zhang + B - the SEQAIJKOKKOS matrix, using local col ids 288076ba34aSJunchao Zhang . reuse - either MAT_INITIAL_MATRIX or MAT_REUSE_MATRIX 289076ba34aSJunchao Zhang . N - global col ids are in range of [0,N). N Must be the same across ranks (nonsignificant in MAT_REUSE_MATRIX) 290076ba34aSJunchao Zhang . l2g - a map mapping B's local col ids to global ones (nonsignificant in MAT_REUSE_MATRIX) 291076ba34aSJunchao Zhang . ownerSF - the ownership SF (nonsignificant in MAT_REUSE_MATRIX) 292076ba34aSJunchao Zhang 293076ba34aSJunchao Zhang Input/Output Parameters (out when resue = MAT_INITIAL_MATRIX, inout when reuse = MAT_REUSE_MATRIX) 294076ba34aSJunchao Zhang + bcastSF - the SF used to bcast rows of B. This plain SF does buffer (abuf) to buffer (Ca) send/recv. In this SF, vertices are nonzeros. 295076ba34aSJunchao Zhang . abuf - buffer for sending matrix values 296076ba34aSJunchao Zhang . rows - array containing indices of (local) rows that this rank needs to bcast to others. Each receiver rank has a chunk in rows[]. 297076ba34aSJunchao Zhang Values in rows[] might have repeats, which simply indicates a row will be bcast'ed to multiple neighbors. 298076ba34aSJunchao Zhang . rowoffset - For each row in rows[], it will be copied to rowoffset[] at abuf[] 299076ba34aSJunchao Zhang - C - the SEQAIJKOKKOS matrix made of the bcast'ed rows, using local col ids. 300076ba34aSJunchao Zhang */ 301d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJKokkosBcast(Mat B, MatReuse reuse, PetscInt N, const ConstMatColIdxKokkosView &l2g, PetscSF ownerSF, PetscSF &bcastSF, MatScalarKokkosView &abuf, MatColIdxKokkosView &rows, MatRowMapKokkosView &rowoffset, Mat &C) 302d71ae5a4SJacob Faibussowitsch { 303076ba34aSJunchao Zhang Mat_SeqAIJKokkos *bkok, *ckok; 304076ba34aSJunchao Zhang 305076ba34aSJunchao Zhang PetscFunctionBegin; 3069566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(B)); /* Make sure B->spptr is accessible */ 307076ba34aSJunchao Zhang bkok = static_cast<Mat_SeqAIJKokkos *>(B->spptr); 308076ba34aSJunchao Zhang 309076ba34aSJunchao Zhang if (reuse == MAT_REUSE_MATRIX) { 310076ba34aSJunchao Zhang ckok = static_cast<Mat_SeqAIJKokkos *>(C->spptr); 311076ba34aSJunchao Zhang 312076ba34aSJunchao Zhang const auto &Ba = bkok->a_dual.view_device(); 313076ba34aSJunchao Zhang const auto &Bi = bkok->i_dual.view_device(); 314076ba34aSJunchao Zhang const auto &Ca = ckok->a_dual.view_device(); 315076ba34aSJunchao Zhang 316076ba34aSJunchao Zhang /* Copy Ba to abuf */ 3179371c9d4SSatish Balay Kokkos::parallel_for( 3189371c9d4SSatish Balay Kokkos::TeamPolicy<>(rows.extent(0), Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 319076ba34aSJunchao Zhang PetscInt i = t.league_rank(); /* rows[i] is r-th row of B */ 320076ba34aSJunchao Zhang PetscInt r = rows(i); 321076ba34aSJunchao Zhang PetscInt base = rowoffset(i); /* Copy r-th row of B to this offset in abuf[] */ 3229371c9d4SSatish Balay Kokkos::parallel_for(Kokkos::TeamThreadRange(t, Bi(r + 1) - Bi(r)), [&](PetscInt k) { abuf(base + k) = Ba(Bi(r) + k); }); 323076ba34aSJunchao Zhang }); 324076ba34aSJunchao Zhang 325076ba34aSJunchao Zhang /* Send abuf to Ca through bcastSF and then mark C is updated on device */ 3269566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(bcastSF, MPIU_SCALAR, abuf.data(), Ca.data(), MPI_REPLACE)); /* TODO: get memtype for abuf */ 3279566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(bcastSF, MPIU_SCALAR, abuf.data(), Ca.data(), MPI_REPLACE)); 328076ba34aSJunchao Zhang ckok->a_dual.modify_device(); 329076ba34aSJunchao Zhang } else if (reuse == MAT_INITIAL_MATRIX) { 330076ba34aSJunchao Zhang MPI_Comm comm; 331076ba34aSJunchao Zhang PetscMPIInt tag; 332076ba34aSJunchao Zhang PetscInt k, Cm, Cn, Cnnz, *Ci_h, nroots, nleaves; 333076ba34aSJunchao Zhang 3349566063dSJacob Faibussowitsch PetscCallMPI(PetscObjectGetComm((PetscObject)ownerSF, &comm)); 3359566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(ownerSF, &nroots, &nleaves, NULL, NULL)); 336076ba34aSJunchao Zhang Cm = nleaves; /* row size of C */ 337076ba34aSJunchao Zhang Cn = N; /* col size of C, which initially uses global ids, so we can safely set its col size as N */ 338076ba34aSJunchao Zhang 339076ba34aSJunchao Zhang /* Get row lens (nz) of B's rows for later fast query */ 340076ba34aSJunchao Zhang PetscInt *Browlens; 341076ba34aSJunchao Zhang const PetscInt *tmp = bkok->i_host_data(); 3429566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nroots, &Browlens)); 343076ba34aSJunchao Zhang for (k = 0; k < nroots; k++) Browlens[k] = tmp[k + 1] - tmp[k]; 344076ba34aSJunchao Zhang 345076ba34aSJunchao Zhang /* By ownerSF, each proc gets lens of rows of C */ 346076ba34aSJunchao Zhang MatRowMapKokkosDualView Ci("i", Cm + 1); /* C's rowmap */ 347076ba34aSJunchao Zhang Ci_h = Ci.view_host().data(); 348076ba34aSJunchao Zhang Ci_h[0] = 0; 3499566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(ownerSF, MPIU_INT, PETSC_MEMTYPE_HOST, Browlens, PETSC_MEMTYPE_HOST, &Ci_h[1], MPI_REPLACE)); 3509566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(ownerSF, MPIU_INT, Browlens, &Ci_h[1], MPI_REPLACE)); 351076ba34aSJunchao Zhang for (k = 1; k < Cm + 1; k++) Ci_h[k] += Ci_h[k - 1]; /* Convert lens to CSR */ 352076ba34aSJunchao Zhang Cnnz = Ci_h[Cm]; 353076ba34aSJunchao Zhang Ci.modify_host(); 354076ba34aSJunchao Zhang Ci.sync_device(); 355076ba34aSJunchao Zhang 356076ba34aSJunchao Zhang /* With the newly known Cnnz, we are able to allocate (j, a) for C on host & device */ 357076ba34aSJunchao Zhang MatColIdxKokkosDualView Cj("j", Cnnz); 358076ba34aSJunchao Zhang MatScalarKokkosDualView Ca("a", Cnnz); 359076ba34aSJunchao Zhang 360076ba34aSJunchao Zhang /* Now build the bcastSF to fill Ca, Cj. This plain SF only does (contiguous) buffer to buffer send/recv */ 361076ba34aSJunchao Zhang const PetscMPIInt *iranks, *ranks; 362076ba34aSJunchao Zhang const PetscInt *ioffset, *irootloc, *roffset; 363076ba34aSJunchao Zhang PetscInt i, j, niranks, nranks, *sdisp, *rdisp, *rowptr; 364076ba34aSJunchao Zhang MPI_Request *reqs; 365076ba34aSJunchao Zhang 3669566063dSJacob Faibussowitsch PetscCall(PetscSFGetLeafRanks(ownerSF, &niranks, &iranks, &ioffset, &irootloc)); /* irootloc[] contains indices of rows I need to send to each receiver */ 3679566063dSJacob Faibussowitsch PetscCall(PetscSFGetRootRanks(ownerSF, &nranks, &ranks, &roffset, NULL /*rmine*/, NULL /*rremote*/)); /* recv info */ 368076ba34aSJunchao Zhang 369076ba34aSJunchao Zhang /* figure out offsets at the send buffer, to build the SF 370076ba34aSJunchao Zhang sdisp[] - stores offsets of nonzeros (in abuf or jbuf, see later) I need to send, per receiver. 371076ba34aSJunchao Zhang rowptr[] - stores offsets for data of each row in abuf 372076ba34aSJunchao Zhang 373076ba34aSJunchao Zhang rdisp[] - to receive sdisp[] 374076ba34aSJunchao Zhang */ 3759566063dSJacob Faibussowitsch PetscCall(PetscMalloc3(niranks + 1, &sdisp, nranks, &rdisp, niranks + nranks, &reqs)); 376076ba34aSJunchao Zhang MatRowMapKokkosViewHost rowptr_h("rowptr_h", ioffset[niranks] + 1); /* Let Kokkos do the allocation, so that we can do an easy mirror later */ 377076ba34aSJunchao Zhang rowptr = rowptr_h.data(); 378076ba34aSJunchao Zhang 379076ba34aSJunchao Zhang sdisp[0] = 0; 380076ba34aSJunchao Zhang rowptr[0] = 0; 381076ba34aSJunchao Zhang for (i = 0; i < niranks; i++) { /* for each receiver */ 382076ba34aSJunchao Zhang PetscInt len, nz = 0; 383076ba34aSJunchao Zhang for (j = ioffset[i]; j < ioffset[i + 1]; j++) { /* for each row to this receiver */ 384076ba34aSJunchao Zhang len = Browlens[irootloc[j]]; 385076ba34aSJunchao Zhang rowptr[j + 1] = rowptr[j] + len; 386076ba34aSJunchao Zhang nz += len; 387076ba34aSJunchao Zhang } 388076ba34aSJunchao Zhang sdisp[i + 1] = sdisp[i] + nz; 389076ba34aSJunchao Zhang } 3909566063dSJacob Faibussowitsch PetscCallMPI(PetscCommGetNewTag(comm, &tag)); 3919566063dSJacob Faibussowitsch for (i = 0; i < nranks; i++) PetscCallMPI(MPI_Irecv(&rdisp[i], 1, MPIU_INT, ranks[i], tag, comm, &reqs[i])); 3929566063dSJacob Faibussowitsch for (i = 0; i < niranks; i++) PetscCallMPI(MPI_Isend(&sdisp[i], 1, MPIU_INT, iranks[i], tag, comm, &reqs[nranks + i])); 3939566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(niranks + nranks, reqs, MPI_STATUSES_IGNORE)); 394076ba34aSJunchao Zhang 395076ba34aSJunchao Zhang PetscInt nleaves2 = Cnnz; /* leaves are the nonzeros I will receive */ 396076ba34aSJunchao Zhang PetscInt nroots2 = sdisp[niranks]; /* roots are the nonzeros (in abuf) I will send */ 397076ba34aSJunchao Zhang PetscSFNode *iremote; 3989566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nleaves2, &iremote)); 399076ba34aSJunchao Zhang for (i = 0; i < nranks; i++) { /* for each sender */ 400076ba34aSJunchao Zhang k = 0; 401076ba34aSJunchao Zhang for (j = Ci_h[roffset[i]]; j < Ci_h[roffset[i + 1]]; j++) { 402076ba34aSJunchao Zhang iremote[j].rank = ranks[i]; 403076ba34aSJunchao Zhang iremote[j].index = rdisp[i] + k; 404076ba34aSJunchao Zhang k++; 405076ba34aSJunchao Zhang } 406076ba34aSJunchao Zhang } 407076ba34aSJunchao Zhang /* TODO: we should extend PetscSF APIs for this buffer-to-buffer send/recv */ 4089566063dSJacob Faibussowitsch PetscCall(PetscSFCreate(comm, &bcastSF)); 4099566063dSJacob Faibussowitsch PetscCall(PetscSFSetGraph(bcastSF, nroots2, nleaves2, NULL /*ilocal*/, PETSC_OWN_POINTER, iremote, PETSC_OWN_POINTER)); 410076ba34aSJunchao Zhang 411076ba34aSJunchao Zhang /* Extract selected rows of B, and copy their (a, j) into abuf[] and jbuf[], with j converted 412076ba34aSJunchao Zhang from local to global. Then use bcastSF to fill Ca, Cj. 413076ba34aSJunchao Zhang */ 414076ba34aSJunchao Zhang ConstMatColIdxKokkosViewHost rows_h(irootloc, ioffset[niranks]); /* irootloc[] stores indices of rows I need to send */ 415076ba34aSJunchao Zhang MatColIdxKokkosView rows("rows", ioffset[niranks]); 416076ba34aSJunchao Zhang Kokkos::deep_copy(rows, rows_h); /* Use deep copy since irootoc is managed by PetscSF and we want 'rows' to be standalone */ 417076ba34aSJunchao Zhang 418076ba34aSJunchao Zhang rowoffset = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), rowptr_h); /* If no device, rowoffset will be an alias to rowptr_h */ 419076ba34aSJunchao Zhang 420076ba34aSJunchao Zhang MatColIdxKokkosView jbuf("jbuf", sdisp[niranks]); /* send buf for (global) col ids */ 421076ba34aSJunchao Zhang abuf = MatScalarKokkosView("abuf", sdisp[niranks]); /* send buf for mat values */ 422076ba34aSJunchao Zhang 423076ba34aSJunchao Zhang const auto &Ba = bkok->a_dual.view_device(); 424076ba34aSJunchao Zhang const auto &Bi = bkok->i_dual.view_device(); 425076ba34aSJunchao Zhang const auto &Bj = bkok->j_dual.view_device(); 426076ba34aSJunchao Zhang 427076ba34aSJunchao Zhang /* Copy Ba, Bj to abuf, jbuf with change col ids from local to global */ 4289371c9d4SSatish Balay Kokkos::parallel_for( 4299371c9d4SSatish Balay Kokkos::TeamPolicy<>(rows.extent(0), Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 430076ba34aSJunchao Zhang PetscInt i = t.league_rank(); /* rows[i] is r-th row of B */ 431076ba34aSJunchao Zhang PetscInt r = rows(i); 432076ba34aSJunchao Zhang PetscInt base = rowoffset(i); /* Copy r-th row of B to this offset in abuf[] */ 433076ba34aSJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(t, Bi(r + 1) - Bi(r)), [&](PetscInt k) { 434076ba34aSJunchao Zhang abuf(base + k) = Ba(Bi(r) + k); 435076ba34aSJunchao Zhang jbuf(base + k) = l2g(Bj(Bi(r) + k)); 436076ba34aSJunchao Zhang }); 437076ba34aSJunchao Zhang }); 438076ba34aSJunchao Zhang 439076ba34aSJunchao Zhang /* Send abuf & jbuf to fill Ca, Cj */ 4409566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(bcastSF, MPIU_INT, jbuf.data(), Cj.view_device().data(), MPI_REPLACE)); 4419566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(bcastSF, MPIU_SCALAR, abuf.data(), Ca.view_device().data(), MPI_REPLACE)); 4429566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(bcastSF, MPIU_INT, jbuf.data(), Cj.view_device().data(), MPI_REPLACE)); 4439566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(bcastSF, MPIU_SCALAR, abuf.data(), Ca.view_device().data(), MPI_REPLACE)); 444076ba34aSJunchao Zhang Cj.modify_device(); /* Mark Cj, Ca modified on device, but only sync Cj since we might not need Ca on host at all */ 445076ba34aSJunchao Zhang Cj.sync_host(); 446076ba34aSJunchao Zhang Ca.modify_device(); 447076ba34aSJunchao Zhang 448076ba34aSJunchao Zhang /* Construct C with Ca, Ci, Cj */ 449076ba34aSJunchao Zhang auto ckok = new Mat_SeqAIJKokkos(Cm, Cn, Cnnz, Ci, Cj, Ca); 4509566063dSJacob Faibussowitsch PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PETSC_COMM_SELF, ckok, &C)); 4519566063dSJacob Faibussowitsch PetscCall(PetscFree3(sdisp, rdisp, reqs)); 4529566063dSJacob Faibussowitsch PetscCall(PetscFree(Browlens)); 45398921bdaSJacob Faibussowitsch } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "Unsupported MatReuse enum %d", reuse); 454*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 455076ba34aSJunchao Zhang } 456076ba34aSJunchao Zhang 457076ba34aSJunchao Zhang /* MatSeqAIJKokkosReduce - Reduce rows of a SEQAIJKOKKOS matrix (A) to form a Kokkos Csr matrix (C) 458076ba34aSJunchao Zhang 459076ba34aSJunchao Zhang It is the reverse of MatSeqAIJKokkosBcast in some sense. 460076ba34aSJunchao Zhang 461076ba34aSJunchao Zhang Think each row of A as a leaf, then the given ownerSF specifies roots of the leaves. Roots may connect to multiple leaves. 462076ba34aSJunchao Zhang In this routine, we reduce (i.e., concatenate) leaves (rows) at their roots to form potentially longer rows in C. Such rows might 463076ba34aSJunchao Zhang contain repeats, which does not matter since they will be summed up by other routines. C's row size will be nroots of ownerSF. 464076ba34aSJunchao Zhang 465076ba34aSJunchao Zhang Input Parameters: 466076ba34aSJunchao Zhang + A - the SEQAIJKOKKOS matrix to be reduced 467076ba34aSJunchao Zhang . reuse - either MAT_INITIAL_MATRIX or MAT_REUSE_MATRIX 468076ba34aSJunchao Zhang . local - true if A uses local col ids; false if A is already in global col ids. 469076ba34aSJunchao Zhang . N - if local, N is A's global col size 470076ba34aSJunchao Zhang . l2g - if local, a map mapping A's local col ids to global ones, which are in range of [0,N). 471076ba34aSJunchao Zhang - ownerSF - the SF specifies ownership (root) of rows in A 472076ba34aSJunchao Zhang 473076ba34aSJunchao Zhang Output Parameters: 474076ba34aSJunchao Zhang + reduceSF - the SF to reduce A's rows to contiguous buffers at the receiver side 475076ba34aSJunchao Zhang . abuf - a contiguous buffer to receive A's rows sent to this proc. Suppose there are 'nrows' such rows. 476076ba34aSJunchao Zhang . srcrowoffset - offset array of size nrows+1. Each entry is the corresponding row's offset in abuf[]. srcrowoffset[i+1]-srcrowoffset[i] is row i's len. 477076ba34aSJunchao Zhang . dstrowoffset - offset array of size nrows. Each entry is the corresponding row's offset in Ca[], i.e., C's 'a' array. Row i, i+1 in abuf[] may go to 478076ba34aSJunchao Zhang unrelated places in Ca, so dstrowoffset is not in CSR-like format as srcrowoffset. 479076ba34aSJunchao Zhang - C - the matrix made up by rows sent to me from other ranks, using global col ids 480076ba34aSJunchao Zhang 481076ba34aSJunchao Zhang TODO: we can even have MatSeqAIJKokkosReduceBegin/End to provide oppertunity for callers to overlap comp./comm. when reuse = MAT_REUSE_MATRIX. 482076ba34aSJunchao Zhang */ 483d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJKokkosReduce(Mat A, MatReuse reuse, PetscBool local, PetscInt N, const ConstMatColIdxKokkosView &l2g, PetscSF ownerSF, PetscSF &reduceSF, MatScalarKokkosView &abuf, MatRowMapKokkosView &srcrowoffset, MatRowMapKokkosView &dstrowoffset, KokkosCsrMatrix &C) 484d71ae5a4SJacob Faibussowitsch { 485076ba34aSJunchao Zhang PetscInt i, r, Am, An, Annz, Cnnz, nrows; 486076ba34aSJunchao Zhang const PetscInt *Ai; 487076ba34aSJunchao Zhang Mat_SeqAIJKokkos *akok; 488076ba34aSJunchao Zhang 489076ba34aSJunchao Zhang PetscFunctionBegin; 4909566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); /* So that A's latest data is on device */ 4919566063dSJacob Faibussowitsch PetscCall(MatGetSize(A, &Am, &An)); 492076ba34aSJunchao Zhang Ai = static_cast<Mat_SeqAIJ *>(A->data)->i; 493076ba34aSJunchao Zhang akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 494076ba34aSJunchao Zhang Annz = Ai[Am]; 495076ba34aSJunchao Zhang 496076ba34aSJunchao Zhang if (reuse == MAT_REUSE_MATRIX) { 497076ba34aSJunchao Zhang /* Send Aa to abuf */ 4989566063dSJacob Faibussowitsch PetscCallMPI(PetscSFReduceBegin(reduceSF, MPIU_SCALAR, akok->a_device_data(), abuf.data(), MPI_REPLACE)); 4999566063dSJacob Faibussowitsch PetscCallMPI(PetscSFReduceEnd(reduceSF, MPIU_SCALAR, akok->a_device_data(), abuf.data(), MPI_REPLACE)); 500076ba34aSJunchao Zhang 501076ba34aSJunchao Zhang /* Copy abuf to Ca */ 502076ba34aSJunchao Zhang const MatScalarKokkosView &Ca = C.values; 503076ba34aSJunchao Zhang nrows = dstrowoffset.extent(0); /* Not srcrowoffset[] since it has an extra entry for CSR */ 5049371c9d4SSatish Balay Kokkos::parallel_for( 5059371c9d4SSatish Balay Kokkos::TeamPolicy<>(nrows, Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 506076ba34aSJunchao Zhang PetscInt i = t.league_rank(); 507076ba34aSJunchao Zhang PetscInt src = srcrowoffset(i), dst = dstrowoffset(i); 508076ba34aSJunchao Zhang PetscInt len = srcrowoffset(i + 1) - srcrowoffset(i); 509076ba34aSJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(t, len), [&](PetscInt k) { Ca(dst + k) = abuf(src + k); }); 510076ba34aSJunchao Zhang }); 511076ba34aSJunchao Zhang } else if (reuse == MAT_INITIAL_MATRIX) { 512076ba34aSJunchao Zhang MPI_Comm comm; 513076ba34aSJunchao Zhang MPI_Request *reqs; 514076ba34aSJunchao Zhang PetscMPIInt tag; 515076ba34aSJunchao Zhang PetscInt Cm; 516076ba34aSJunchao Zhang 5179566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)ownerSF, &comm)); 5189566063dSJacob Faibussowitsch PetscCall(PetscCommGetNewTag(comm, &tag)); 519076ba34aSJunchao Zhang 520076ba34aSJunchao Zhang PetscInt niranks, nranks, nroots, nleaves; 521076ba34aSJunchao Zhang const PetscMPIInt *iranks, *ranks; 522076ba34aSJunchao Zhang const PetscInt *ioffset, *rows, *roffset; /* rows[] contains local indices of rows scattered to me from others. ioffset[] is a CSR on rows[] */ 5239566063dSJacob Faibussowitsch PetscCall(PetscSFSetUp(ownerSF)); 5249566063dSJacob Faibussowitsch PetscCall(PetscSFGetLeafRanks(ownerSF, &niranks, &iranks, &ioffset, &rows)); /* recv info: iranks[] will send rows to me */ 5259566063dSJacob Faibussowitsch PetscCall(PetscSFGetRootRanks(ownerSF, &nranks, &ranks, &roffset, NULL /*rmine*/, NULL /*rremote*/)); /* send info */ 5269566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(ownerSF, &nroots, &nleaves, NULL, NULL)); 52708401ef6SPierre Jolivet PetscCheck(nleaves == Am, PETSC_COMM_SELF, PETSC_ERR_PLIB, "ownerSF's nleaves(%" PetscInt_FMT ") != row size of A(%" PetscInt_FMT ")", nleaves, Am); 528076ba34aSJunchao Zhang Cm = nroots; 529076ba34aSJunchao Zhang nrows = ioffset[niranks]; /* # of rows to be received. Might receive same row (each is partial) from different senders */ 530076ba34aSJunchao Zhang 531076ba34aSJunchao Zhang /* Tell owners how long each row I will send */ 532076ba34aSJunchao Zhang PetscInt *srowlens; /* send buf of row lens */ 533076ba34aSJunchao Zhang MatRowMapKokkosViewHost rrowlens_h("rrowoffset_h", nrows + 1); /* recv buf of row lens. +1 to make CSR later. Memory might be passed to other views */ 534076ba34aSJunchao Zhang PetscInt *rrowlens = rrowlens_h.data(); 535076ba34aSJunchao Zhang 5369566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(Am, &srowlens, niranks + nranks, &reqs)); 537076ba34aSJunchao Zhang for (i = 0; i < Am; i++) srowlens[i] = Ai[i + 1] - Ai[i]; 538076ba34aSJunchao Zhang rrowlens[0] = 0; 539076ba34aSJunchao Zhang rrowlens++; /* shift the pointer to make the following expression more readable */ 5409566063dSJacob Faibussowitsch for (i = 0; i < niranks; i++) PetscCallMPI(MPI_Irecv(&rrowlens[ioffset[i]], ioffset[i + 1] - ioffset[i], MPIU_INT, iranks[i], tag, comm, &reqs[i])); 5419566063dSJacob Faibussowitsch for (i = 0; i < nranks; i++) PetscCallMPI(MPI_Isend(&srowlens[roffset[i]], roffset[i + 1] - roffset[i], MPIU_INT, ranks[i], tag, comm, &reqs[niranks + i])); 5429566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(niranks + nranks, reqs, MPI_STATUSES_IGNORE)); 543076ba34aSJunchao Zhang 544076ba34aSJunchao Zhang /* Owner builds Ci on host by histogramming rrowlens[] */ 545076ba34aSJunchao Zhang MatRowMapKokkosViewHost Ci_h("i", Cm + 1); 546076ba34aSJunchao Zhang Kokkos::deep_copy(Ci_h, 0); /* Zero Ci */ 547076ba34aSJunchao Zhang MatRowMapType *Ci_ptr = Ci_h.data(); 548076ba34aSJunchao Zhang 549076ba34aSJunchao Zhang for (i = 0; i < nrows; i++) { 550076ba34aSJunchao Zhang r = rows[i]; /* local row id of i-th received row */ 551076ba34aSJunchao Zhang #if defined(PETSC_USE_DEBUG) 552aed4548fSBarry Smith PetscCheck(r >= 0 && r < Cm, PETSC_COMM_SELF, PETSC_ERR_PLIB, "local row id (%" PetscInt_FMT ") is out of range [0,%" PetscInt_FMT ")", r, Cm); 553076ba34aSJunchao Zhang #endif 554076ba34aSJunchao Zhang Ci_ptr[r + 1] += rrowlens[i]; /* add to length of row r in C */ 555076ba34aSJunchao Zhang } 556076ba34aSJunchao Zhang for (i = 0; i < Cm; i++) Ci_ptr[i + 1] += Ci_ptr[i]; /* to CSR format */ 557076ba34aSJunchao Zhang Cnnz = Ci_ptr[Cm]; 558076ba34aSJunchao Zhang 559076ba34aSJunchao Zhang /* For each received row, compute src & dst offsets in memory copying (from recv bufs abuf, jbuf to Ca, Cj) */ 560076ba34aSJunchao Zhang MatRowMapKokkosViewHost dstrowoffset_h("dstrowoffset_h", nrows); 561076ba34aSJunchao Zhang PetscInt *dstrowoffset_hptr = dstrowoffset_h.data(); 562076ba34aSJunchao Zhang PetscInt *currowlens; /* Current row lens. They are temp accumulators for row lens in C, to help build dstrowoffset */ 563076ba34aSJunchao Zhang 5649566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(Cm, &currowlens)); /* Init with zero, to be added to */ 565076ba34aSJunchao Zhang for (i = 0; i < nrows; i++) { /* for each row I receive */ 566076ba34aSJunchao Zhang r = rows[i]; /* row id in C */ 567076ba34aSJunchao Zhang dstrowoffset_hptr[i] = Ci_ptr[r] + currowlens[r]; /* dst offset of the new place for each recv'ed row in Ca/Cj */ 568076ba34aSJunchao Zhang currowlens[r] += rrowlens[i]; /* accumulate to length of row r in C */ 569076ba34aSJunchao Zhang } 5709566063dSJacob Faibussowitsch PetscCall(PetscFree(currowlens)); 571076ba34aSJunchao Zhang 572076ba34aSJunchao Zhang rrowlens--; 573076ba34aSJunchao Zhang for (i = 0; i < nrows; i++) rrowlens[i + 1] += rrowlens[i]; /* Change rrowlens[] to CSR format */ 574076ba34aSJunchao Zhang dstrowoffset = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), dstrowoffset_h); 575076ba34aSJunchao Zhang srcrowoffset = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), rrowlens_h); /* src offset of each recv'ed row in abuf/jbuf */ 576076ba34aSJunchao Zhang 577076ba34aSJunchao Zhang /* Build the reduceSF, which performs buffer to buffer send/recv */ 578076ba34aSJunchao Zhang PetscInt *sdisp, *rdisp; /* buffer to send offsets of roots, and buffer to recv them */ 5799566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(niranks, &sdisp, nranks, &rdisp)); 580076ba34aSJunchao Zhang for (i = 0; i < niranks; i++) sdisp[i] = rrowlens[ioffset[i]]; 5819566063dSJacob Faibussowitsch for (i = 0; i < nranks; i++) PetscCallMPI(MPI_Irecv(&rdisp[i], 1, MPIU_INT, ranks[i], tag, comm, &reqs[i])); 5829566063dSJacob Faibussowitsch for (i = 0; i < niranks; i++) PetscCallMPI(MPI_Isend(&sdisp[i], 1, MPIU_INT, iranks[i], tag, comm, &reqs[nranks + i])); 5839566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(niranks + nranks, reqs, MPI_STATUSES_IGNORE)); 584076ba34aSJunchao Zhang 585076ba34aSJunchao Zhang /* Nonzeros in abuf/jbuf are roots and those in A are leaves */ 586076ba34aSJunchao Zhang PetscInt nroots2 = Cnnz, nleaves2 = Annz; 587076ba34aSJunchao Zhang PetscSFNode *iremote; 5889566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nleaves2, &iremote)); /* no free, since memory will be given to reduceSF */ 589076ba34aSJunchao Zhang for (i = 0; i < nranks; i++) { 590076ba34aSJunchao Zhang PetscInt rootbase = rdisp[i]; /* root offset at this root rank */ 591076ba34aSJunchao Zhang PetscInt leafbase = Ai[roffset[i]]; /* leaf base */ 592076ba34aSJunchao Zhang PetscInt nz = Ai[roffset[i + 1]] - leafbase; /* I will send nz nonzeros to this root rank */ 593076ba34aSJunchao Zhang for (PetscInt k = 0; k < nz; k++) { 594076ba34aSJunchao Zhang iremote[leafbase + k].rank = ranks[i]; 595076ba34aSJunchao Zhang iremote[leafbase + k].index = rootbase + k; 596076ba34aSJunchao Zhang } 597076ba34aSJunchao Zhang } 5989566063dSJacob Faibussowitsch PetscCall(PetscSFCreate(comm, &reduceSF)); 5999566063dSJacob Faibussowitsch PetscCall(PetscSFSetGraph(reduceSF, nroots2, nleaves2, NULL, PETSC_OWN_POINTER, iremote, PETSC_OWN_POINTER)); 6009566063dSJacob Faibussowitsch PetscCall(PetscFree2(sdisp, rdisp)); 601076ba34aSJunchao Zhang 602076ba34aSJunchao Zhang /* Reduce Aa, Ajg to abuf and jbuf */ 603076ba34aSJunchao Zhang 604076ba34aSJunchao Zhang /* If A uses local col ids, convert them to global ones before sending */ 605076ba34aSJunchao Zhang MatColIdxKokkosView Ajg; 606076ba34aSJunchao Zhang if (local) { 607076ba34aSJunchao Zhang Ajg = MatColIdxKokkosView("j", Annz); 608076ba34aSJunchao Zhang const MatColIdxKokkosView &Aj = akok->j_dual.view_device(); 6099371c9d4SSatish Balay Kokkos::parallel_for( 6109371c9d4SSatish Balay Annz, KOKKOS_LAMBDA(const PetscInt i) { Ajg(i) = l2g(Aj(i)); }); 611076ba34aSJunchao Zhang } else { 612076ba34aSJunchao Zhang Ajg = akok->j_dual.view_device(); /* no data copy, just take a reference */ 613076ba34aSJunchao Zhang } 614076ba34aSJunchao Zhang 615076ba34aSJunchao Zhang MatColIdxKokkosView jbuf("jbuf", Cnnz); 616076ba34aSJunchao Zhang abuf = MatScalarKokkosView("abuf", Cnnz); 6179566063dSJacob Faibussowitsch PetscCallMPI(PetscSFReduceBegin(reduceSF, MPIU_INT, Ajg.data(), jbuf.data(), MPI_REPLACE)); 6189566063dSJacob Faibussowitsch PetscCallMPI(PetscSFReduceEnd(reduceSF, MPIU_INT, Ajg.data(), jbuf.data(), MPI_REPLACE)); 6199566063dSJacob Faibussowitsch PetscCallMPI(PetscSFReduceBegin(reduceSF, MPIU_SCALAR, akok->a_device_data(), abuf.data(), MPI_REPLACE)); 6209566063dSJacob Faibussowitsch PetscCallMPI(PetscSFReduceEnd(reduceSF, MPIU_SCALAR, akok->a_device_data(), abuf.data(), MPI_REPLACE)); 621076ba34aSJunchao Zhang 622076ba34aSJunchao Zhang /* Copy data from abuf, jbuf to Ca, Cj */ 623076ba34aSJunchao Zhang MatRowMapKokkosView Ci = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Ci_h); /* Ci is an alias of Ci_h if no device */ 624076ba34aSJunchao Zhang MatColIdxKokkosView Cj("j", Cnnz); 625076ba34aSJunchao Zhang MatScalarKokkosView Ca("a", Cnnz); 626076ba34aSJunchao Zhang 6279371c9d4SSatish Balay Kokkos::parallel_for( 6289371c9d4SSatish Balay Kokkos::TeamPolicy<>(nrows, Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 629076ba34aSJunchao Zhang PetscInt i = t.league_rank(); 630076ba34aSJunchao Zhang PetscInt src = srcrowoffset(i), dst = dstrowoffset(i); 631076ba34aSJunchao Zhang PetscInt len = srcrowoffset(i + 1) - srcrowoffset(i); 632076ba34aSJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(t, len), [&](PetscInt k) { 633076ba34aSJunchao Zhang Ca(dst + k) = abuf(src + k); 634076ba34aSJunchao Zhang Cj(dst + k) = jbuf(src + k); 635076ba34aSJunchao Zhang }); 636076ba34aSJunchao Zhang }); 637076ba34aSJunchao Zhang 638076ba34aSJunchao Zhang /* Build C with Ca, Ci, Cj */ 639076ba34aSJunchao Zhang C = KokkosCsrMatrix("csrmat", Cm, N, Cnnz, Ca, Ci, Cj); 6409566063dSJacob Faibussowitsch PetscCall(PetscFree2(srowlens, reqs)); 64198921bdaSJacob Faibussowitsch } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "Unsupported MatReuse enum %d", reuse); 642*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 643076ba34aSJunchao Zhang } 644076ba34aSJunchao Zhang 64511a5261eSBarry Smith /* MatSetMPIAIJKokkosWithGlobalCSRMatrix - Set the diag and offdiag parts of a `MATMPIAIJKOKKOS` matrix by splitting a KokkosCsrMatrix 646076ba34aSJunchao Zhang 647076ba34aSJunchao Zhang Input Parameters: 64811a5261eSBarry Smith + C - the `MATMPIAIJKOKKOS` matrix, of size m,n,M,N 649076ba34aSJunchao Zhang . reuse - indicate whether the matrix has called this function before 650076ba34aSJunchao Zhang . csrmat - the KokkosCsrMatrix, of size m,N 65111a5261eSBarry Smith - Cdstart - when reuse == `MAT_REUSE_MATRIX`, it is an input parameter. For each row in csrmat, it stores the start of the first 652076ba34aSJunchao Zhang entry of the diag block of C in csrmat's j array. E.g, if row i has col ids = {0, 3, 4, 5, 7, 9} and the first diag 653076ba34aSJunchao Zhang entry is 5, then Cdstart[i] = 3. 654076ba34aSJunchao Zhang 655076ba34aSJunchao Zhang Output Parameters: 65611a5261eSBarry Smith + C - the updated `MATMPIAIJKOKKOS` matrix 65711a5261eSBarry Smith - Cdstart - when reuse == `MAT_INITIAL_MATRIX`, it is an output parameter 658076ba34aSJunchao Zhang 65911a5261eSBarry Smith Note: 66011a5261eSBarry Smith Between calls with `MAT_INITIAL_MATRIX` or `MAT_REUSE_MATRIX`, csrmat must have the same nonzero pattern 66111a5261eSBarry Smith 66211a5261eSBarry Smith .seealso: `MATMPIAIJKOKKOS` 663076ba34aSJunchao Zhang */ 664d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetMPIAIJKokkosWithGlobalCSRMatrix(Mat C, MatReuse reuse, const KokkosCsrMatrix &csrmat, MatRowMapKokkosView &Cdstart) 665d71ae5a4SJacob Faibussowitsch { 666076ba34aSJunchao Zhang const MatScalarKokkosView &Ca = csrmat.values; 667076ba34aSJunchao Zhang const ConstMatRowMapKokkosView &Ci = csrmat.graph.row_map; 668076ba34aSJunchao Zhang PetscInt m, n, N; 669076ba34aSJunchao Zhang 670076ba34aSJunchao Zhang PetscFunctionBegin; 6719566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(C, &m, &n)); 6729566063dSJacob Faibussowitsch PetscCall(MatGetSize(C, NULL, &N)); 673076ba34aSJunchao Zhang 674076ba34aSJunchao Zhang if (reuse == MAT_REUSE_MATRIX) { 675076ba34aSJunchao Zhang Mat_MPIAIJ *mpiaij = static_cast<Mat_MPIAIJ *>(C->data); 676076ba34aSJunchao Zhang Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos *>(mpiaij->A->spptr); 677076ba34aSJunchao Zhang Mat_SeqAIJKokkos *bkok = static_cast<Mat_SeqAIJKokkos *>(mpiaij->B->spptr); 678076ba34aSJunchao Zhang const MatScalarKokkosView &Cda = akok->a_dual.view_device(), Coa = bkok->a_dual.view_device(); 679076ba34aSJunchao Zhang const MatRowMapKokkosView &Cdi = akok->i_dual.view_device(), Coi = bkok->i_dual.view_device(); 680076ba34aSJunchao Zhang 681076ba34aSJunchao Zhang /* Fill 'a' of Cd and Co on device */ 6829371c9d4SSatish Balay Kokkos::parallel_for( 6839371c9d4SSatish Balay Kokkos::TeamPolicy<>(m, Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 684076ba34aSJunchao Zhang PetscInt i = t.league_rank(); /* row i */ 685076ba34aSJunchao Zhang PetscInt clen = Ci(i + 1) - Ci(i); /* len of row i of C */ 686076ba34aSJunchao Zhang PetscInt cdlen = Cdi(i + 1) - Cdi(i); /* len of row i of Cd */ 687076ba34aSJunchao Zhang PetscInt cdstart = Cdstart(i); /* [start, end) of row i of Cd in C */ 688076ba34aSJunchao Zhang PetscInt cdend = cdstart + cdlen; 689076ba34aSJunchao Zhang /* [0, clen) is cut into three blocks: [0, cdstart), [cdstart, cdend), [cdend, clen) */ 690076ba34aSJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(t, clen), [&](PetscInt k) { 691076ba34aSJunchao Zhang if (k < cdstart) { /* k in [0, cdstart) */ 692076ba34aSJunchao Zhang Coa(Coi(i) + k) = Ca(Ci(i) + k); 693076ba34aSJunchao Zhang } else if (k < cdend) { /* k in [cdstart, cdend) */ 694076ba34aSJunchao Zhang Cda(Cdi(i) + (k - cdstart)) = Ca(Ci(i) + k); 695076ba34aSJunchao Zhang } else { /* k in [cdend, clen) */ 696076ba34aSJunchao Zhang Coa(Coi(i) + k - cdlen) = Ca(Ci(i) + k); 697076ba34aSJunchao Zhang } 698076ba34aSJunchao Zhang }); 699076ba34aSJunchao Zhang }); 700076ba34aSJunchao Zhang 701076ba34aSJunchao Zhang akok->a_dual.modify_device(); 702076ba34aSJunchao Zhang bkok->a_dual.modify_device(); 703076ba34aSJunchao Zhang } else if (reuse == MAT_INITIAL_MATRIX) { 704076ba34aSJunchao Zhang Mat Cd, Co; 705076ba34aSJunchao Zhang const MatColIdxKokkosView &Cj = csrmat.graph.entries; 706076ba34aSJunchao Zhang MatRowMapKokkosDualView Cdi_dual("i", m + 1), Coi_dual("i", m + 1); 707076ba34aSJunchao Zhang MatRowMapKokkosView Cdi = Cdi_dual.view_device(), Coi = Coi_dual.view_device(); 708076ba34aSJunchao Zhang PetscInt cstart, cend; 709076ba34aSJunchao Zhang 710076ba34aSJunchao Zhang /* Note that each row of C is sorted by col ids. We want to find out how to cut each row into three blocks: 711076ba34aSJunchao Zhang left to the diag block, diag block, right to the diag block. The diag block have col ids in [cstart,cend). 712076ba34aSJunchao Zhang Suppose a row of C has len nonzeros, indexed by [0, len). We want to know two indices: cdstart and cdend, 713076ba34aSJunchao Zhang such that the three blocks are [0,cdstart), [cdstart,cdend), [cdend,len). The following code equivalentaly 714076ba34aSJunchao Zhang stores values of cdstart and cdend-cstart (aka Cdi[]) instead. 715076ba34aSJunchao Zhang */ 716076ba34aSJunchao Zhang Cdstart = MatRowMapKokkosView("Cdstart", m); 7179566063dSJacob Faibussowitsch PetscCall(PetscLayoutGetRange(C->cmap, &cstart, &cend)); /* Not MatGetOwnershipRangeColumn() since C has not been preallocated yet */ 718076ba34aSJunchao Zhang 719076ba34aSJunchao Zhang /* I could use RangePolicy and one thread per row. But since each thread essentially does binary search, threads in a 720076ba34aSJunchao Zhang CUDA warp would completely diverge. So I use TeamPolicy with a team size 1. 721076ba34aSJunchao Zhang */ 7229371c9d4SSatish Balay Kokkos::parallel_for( 7239371c9d4SSatish Balay Kokkos::TeamPolicy<>(m, 1), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 724076ba34aSJunchao Zhang Kokkos::single(Kokkos::PerTeam(t), [=]() { /* Only one thread works in a team */ 725076ba34aSJunchao Zhang PetscInt i = t.league_rank(); /* row i */ 726076ba34aSJunchao Zhang PetscInt j, first, count, step; 727076ba34aSJunchao Zhang 728076ba34aSJunchao Zhang if (i == 0) { /* Set the first entry of the i arrays to zero on device, to be used in CSR */ 729076ba34aSJunchao Zhang Cdi(0) = 0; 730076ba34aSJunchao Zhang Coi(0) = 0; 731076ba34aSJunchao Zhang } 732076ba34aSJunchao Zhang 733076ba34aSJunchao Zhang /* Do std::lower_bound(Ci(i),Ci(i+1),cstart) on Cj[]. We use j as the iterator. lower_bound() returns 734076ba34aSJunchao Zhang in 'first' the first iterator with a value >= cstart, or last iterator if no such element is found. 735076ba34aSJunchao Zhang */ 736076ba34aSJunchao Zhang count = Ci(i + 1) - Ci(i); 737076ba34aSJunchao Zhang first = Ci(i); 738076ba34aSJunchao Zhang while (count > 0) { 739076ba34aSJunchao Zhang j = first; 740076ba34aSJunchao Zhang step = count / 2; 741076ba34aSJunchao Zhang j += step; 742076ba34aSJunchao Zhang if (Cj(j) < cstart) { 743076ba34aSJunchao Zhang first = ++j; 744076ba34aSJunchao Zhang count -= step + 1; 745076ba34aSJunchao Zhang } else count = step; 746076ba34aSJunchao Zhang } 747076ba34aSJunchao Zhang Cdstart(i) = first - Ci(i); /* 'first' is the while-loop's output */ 748076ba34aSJunchao Zhang 749076ba34aSJunchao Zhang /* Do std::lower_bound(first,Ci(i+1),cend) on Cj[] */ 750076ba34aSJunchao Zhang count = Ci(i + 1) - first; 751076ba34aSJunchao Zhang while (count > 0) { 752076ba34aSJunchao Zhang j = first; 753076ba34aSJunchao Zhang step = count / 2; 754076ba34aSJunchao Zhang j += step; 755076ba34aSJunchao Zhang if (Cj(j) < cend) { 756076ba34aSJunchao Zhang first = ++j; 757076ba34aSJunchao Zhang count -= step + 1; 758076ba34aSJunchao Zhang } else count = step; 759076ba34aSJunchao Zhang } 760076ba34aSJunchao Zhang Cdi(i + 1) = first - (Ci(i) + Cdstart(i)); /* 'first' is the while-loop's output */ 761076ba34aSJunchao Zhang Coi(i + 1) = (Ci(i + 1) - Ci(i)) - Cdi(i + 1); /* Co's row len = C's row len - Cd's row len */ 762076ba34aSJunchao Zhang }); 763076ba34aSJunchao Zhang }); 764076ba34aSJunchao Zhang 765076ba34aSJunchao Zhang /* Convert row lens in Cdi[], Coi[] to CSR format using inclusive scan, e.g., changing [0,1,2,3] into [0,1,3,6] */ 7669371c9d4SSatish Balay Kokkos::parallel_scan( 7679371c9d4SSatish Balay m + 1, KOKKOS_LAMBDA(const PetscInt i, PetscInt &update, const bool final) { 768076ba34aSJunchao Zhang update += Cdi(i); 769076ba34aSJunchao Zhang if (final) Cdi(i) = update; 770076ba34aSJunchao Zhang }); 7719371c9d4SSatish Balay Kokkos::parallel_scan( 7729371c9d4SSatish Balay m + 1, KOKKOS_LAMBDA(const PetscInt i, PetscInt &update, const bool final) { 773076ba34aSJunchao Zhang update += Coi(i); 774076ba34aSJunchao Zhang if (final) Coi(i) = update; 775076ba34aSJunchao Zhang }); 776076ba34aSJunchao Zhang 777076ba34aSJunchao Zhang /* Get Cdi, Coi on host (it is not a waste, since we do need them on host in 778076ba34aSJunchao Zhang MatCreateSeqAIJKokkosWithCSRMatrix() below), then get nnz of Cd and Co. 779076ba34aSJunchao Zhang */ 780076ba34aSJunchao Zhang Cdi_dual.modify_device(); 781076ba34aSJunchao Zhang Coi_dual.modify_device(); 782076ba34aSJunchao Zhang Cdi_dual.sync_host(); 783076ba34aSJunchao Zhang Coi_dual.sync_host(); 784076ba34aSJunchao Zhang PetscInt Cd_nnz = Cdi_dual.view_host().data()[m]; 785076ba34aSJunchao Zhang PetscInt Co_nnz = Coi_dual.view_host().data()[m]; 786076ba34aSJunchao Zhang 787076ba34aSJunchao Zhang /* With nnz, allocate a, j for Cd and Co */ 788076ba34aSJunchao Zhang MatColIdxKokkosDualView Cdj_dual("j", Cd_nnz), Coj_dual("j", Co_nnz); 789076ba34aSJunchao Zhang MatScalarKokkosDualView Cda_dual("a", Cd_nnz), Coa_dual("a", Co_nnz); 790076ba34aSJunchao Zhang 791076ba34aSJunchao Zhang /* Fill a, j of Cd and Co on device */ 792076ba34aSJunchao Zhang MatColIdxKokkosView Cdj = Cdj_dual.view_device(), Coj = Coj_dual.view_device(); 793076ba34aSJunchao Zhang MatScalarKokkosView Cda = Cda_dual.view_device(), Coa = Coa_dual.view_device(); 794076ba34aSJunchao Zhang 7959371c9d4SSatish Balay Kokkos::parallel_for( 7969371c9d4SSatish Balay Kokkos::TeamPolicy<>(m, Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 797076ba34aSJunchao Zhang PetscInt i = t.league_rank(); /* row i */ 798076ba34aSJunchao Zhang PetscInt clen = Ci(i + 1) - Ci(i); /* len of row i of C */ 799076ba34aSJunchao Zhang PetscInt cdlen = Cdi(i + 1) - Cdi(i); /* len of row i of Cd */ 800076ba34aSJunchao Zhang PetscInt cdstart = Cdstart(i); /* [start, end) of row i of Cd in C */ 801076ba34aSJunchao Zhang PetscInt cdend = cdstart + cdlen; 802076ba34aSJunchao Zhang /* [0, clen) is cut into three blocks: [0, cdstart), [cdstart, cdend), [cdend, clen) */ 803076ba34aSJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(t, clen), [&](PetscInt k) { 804076ba34aSJunchao Zhang if (k < cdstart) { /* k in [0, cdstart) */ 805076ba34aSJunchao Zhang Coa(Coi(i) + k) = Ca(Ci(i) + k); 806076ba34aSJunchao Zhang Coj(Coi(i) + k) = Cj(Ci(i) + k); 807076ba34aSJunchao Zhang } else if (k < cdend) { /* k in [cdstart, cdend) */ 808076ba34aSJunchao Zhang Cda(Cdi(i) + (k - cdstart)) = Ca(Ci(i) + k); 809076ba34aSJunchao Zhang Cdj(Cdi(i) + (k - cdstart)) = Cj(Ci(i) + k) - cstart; /* Use local col ids in Cdj */ 810076ba34aSJunchao Zhang } else { /* k in [cdend, clen) */ 811076ba34aSJunchao Zhang Coa(Coi(i) + k - cdlen) = Ca(Ci(i) + k); 812076ba34aSJunchao Zhang Coj(Coi(i) + k - cdlen) = Cj(Ci(i) + k); 813076ba34aSJunchao Zhang } 814076ba34aSJunchao Zhang }); 815076ba34aSJunchao Zhang }); 816076ba34aSJunchao Zhang 817076ba34aSJunchao Zhang Cdj_dual.modify_device(); 818076ba34aSJunchao Zhang Cda_dual.modify_device(); 819076ba34aSJunchao Zhang Coj_dual.modify_device(); 820076ba34aSJunchao Zhang Coa_dual.modify_device(); 821076ba34aSJunchao Zhang /* With a, i, j for Cd and Co, finally build Cd, Co and then C. Their offloadmask will be set in each's MatAssemblyEnd */ 822076ba34aSJunchao Zhang auto cdkok = new Mat_SeqAIJKokkos(m, n, Cd_nnz, Cdi_dual, Cdj_dual, Cda_dual); 823076ba34aSJunchao Zhang auto cokok = new Mat_SeqAIJKokkos(m, N, Co_nnz, Coi_dual, Coj_dual, Coa_dual); 8249566063dSJacob Faibussowitsch PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PETSC_COMM_SELF, cdkok, &Cd)); 8259566063dSJacob Faibussowitsch PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PETSC_COMM_SELF, cokok, &Co)); 8269566063dSJacob Faibussowitsch PetscCall(MatSetMPIAIJKokkosWithSplitSeqAIJKokkosMatrices(C, Cd, Co)); /* Coj will be converted to local ids within */ 827076ba34aSJunchao Zhang } 828*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 829076ba34aSJunchao Zhang } 830076ba34aSJunchao Zhang 831076ba34aSJunchao Zhang /* MatSeqAIJCompactOutExtraColumns_SeqAIJKokkos - Compact a SEQAIJKOKKS matrix's global col ids. 832076ba34aSJunchao Zhang 833076ba34aSJunchao Zhang It is similar to MatSeqAIJCompactOutExtraColumns_SeqAIJ, but it applies to SEQAIJKOKKOS and returns the l2g map in Kokkos view. 834076ba34aSJunchao Zhang 835076ba34aSJunchao Zhang Input Parameters: 836076ba34aSJunchao Zhang + C - the MATMPIAIJKOKKOS matrix, of size m,n,M,N 837076ba34aSJunchao Zhang . reuse - indicate whether the matrix has called this function before 838076ba34aSJunchao Zhang . csrmat - the KokkosCsrMatrix, of size m,N 839076ba34aSJunchao Zhang - Cdoffset - when reuse == MAT_REUSE_MATRIX, it is an input parameter. For each row in csrmat, it stores the offset of the first 840076ba34aSJunchao Zhang entry of the diag block of C in csrmat's j array. 841076ba34aSJunchao Zhang 842076ba34aSJunchao Zhang Output Parameters: 843076ba34aSJunchao Zhang + C - the updated MATMPIAIJKOKKOS matrix 844076ba34aSJunchao Zhang - Cdoffset - when reuse == MAT_INITIAL_MATRIX, it is an output parameter 845076ba34aSJunchao Zhang 84611a5261eSBarry Smith Note: 84711a5261eSBarry Smith the input matrix's col ids and col size will be changed. 848076ba34aSJunchao Zhang */ 849d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJCompactOutExtraColumns_SeqAIJKokkos(Mat C, MatColIdxKokkosView &l2g) 850d71ae5a4SJacob Faibussowitsch { 851076ba34aSJunchao Zhang Mat_SeqAIJKokkos *ckok; 852076ba34aSJunchao Zhang ISLocalToGlobalMapping l2gmap; 853076ba34aSJunchao Zhang const PetscInt *garray; 854076ba34aSJunchao Zhang PetscInt sz; 855076ba34aSJunchao Zhang 856076ba34aSJunchao Zhang PetscFunctionBegin; 857076ba34aSJunchao Zhang /* Compact P_other's global col ids and col size. We do it since we guess with local ids KK might be more memory scalable */ 8589566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCompactOutExtraColumns_SeqAIJ(C, &l2gmap)); 859076ba34aSJunchao Zhang ckok = static_cast<Mat_SeqAIJKokkos *>(C->spptr); 860076ba34aSJunchao Zhang ckok->j_dual.modify_host(); /* P_other's j is modified on host; we need to sync it on device */ 861076ba34aSJunchao Zhang ckok->j_dual.sync_device(); 862076ba34aSJunchao Zhang ckok->SetColSize(C->cmap->n); /* Update col size of the csrmat in spptr */ 863076ba34aSJunchao Zhang 864076ba34aSJunchao Zhang /* Build l2g -- the local to global mapping of C's cols */ 8659566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetIndices(l2gmap, &garray)); 8669566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetSize(l2gmap, &sz)); 86708401ef6SPierre Jolivet PetscCheck(C->cmap->n == sz, PETSC_COMM_SELF, PETSC_ERR_PLIB, "matrix column size(%" PetscInt_FMT ") != l2g mapping size(%" PetscInt_FMT ")", C->cmap->n, sz); 868076ba34aSJunchao Zhang 869076ba34aSJunchao Zhang ConstMatColIdxKokkosViewHost tmp(garray, sz); 870076ba34aSJunchao Zhang l2g = MatColIdxKokkosView("l2g", sz); 871076ba34aSJunchao Zhang Kokkos::deep_copy(l2g, tmp); 872076ba34aSJunchao Zhang 8739566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRestoreIndices(l2gmap, &garray)); 8749566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingDestroy(&l2gmap)); 875*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 876076ba34aSJunchao Zhang } 877076ba34aSJunchao Zhang 878076ba34aSJunchao Zhang /* MatProductSymbolic_MPIAIJKokkos_AB - AB flavor of MatProductSymbolic_MPIAIJKokkos 879076ba34aSJunchao Zhang 880076ba34aSJunchao Zhang Input Parameters: 881076ba34aSJunchao Zhang + product - Mat_Product which carried out the computation. Passed in to access info about this mat product. 882076ba34aSJunchao Zhang . A - an MPIAIJKOKKOS matrix 883076ba34aSJunchao Zhang . B - an MPIAIJKOKKOS matrix 884076ba34aSJunchao Zhang - mm - a struct used to stash intermediate data when computing AB. Persist from symbolic to numeric operations. 885076ba34aSJunchao Zhang 88611a5261eSBarry Smith Note: The local part of the result C is stored as mm->C_global, which is of type KokkosCsrMatrix and uses global col ids. 887076ba34aSJunchao Zhang */ 888d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSymbolic_MPIAIJKokkos_AB(Mat_Product *product, Mat A, Mat B, MatMatStruct_AB *mm) 889d71ae5a4SJacob Faibussowitsch { 890076ba34aSJunchao Zhang Mat_MPIAIJ *a = static_cast<Mat_MPIAIJ *>(A->data); 891076ba34aSJunchao Zhang Mat Ad = a->A, Ao = a->B; /* diag and offdiag of A */ 892076ba34aSJunchao Zhang IS glob = NULL; 893076ba34aSJunchao Zhang const PetscInt *garray; 894076ba34aSJunchao Zhang PetscInt N = B->cmap->N, sz; 895076ba34aSJunchao Zhang ConstMatColIdxKokkosView l2g1; /* two temp maps mapping local col ids to global ones */ 896076ba34aSJunchao Zhang MatColIdxKokkosView l2g2; 897076ba34aSJunchao Zhang Mat C1, C2; /* intermediate matrices */ 898076ba34aSJunchao Zhang 899076ba34aSJunchao Zhang PetscFunctionBegin; 900076ba34aSJunchao Zhang /* C1 = Ad * B_local. B_local is a matrix got by merging Bd and Bo, and uses local col ids */ 9019566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMatMerge(B, MAT_INITIAL_MATRIX, &glob, &mm->B_local)); 9029566063dSJacob Faibussowitsch PetscCall(MatProductCreate(Ad, mm->B_local, NULL, &C1)); 9039566063dSJacob Faibussowitsch PetscCall(MatProductSetType(C1, MATPRODUCT_AB)); 9049566063dSJacob Faibussowitsch PetscCall(MatProductSetFill(C1, product->fill)); 905076ba34aSJunchao Zhang C1->product->api_user = product->api_user; 9069566063dSJacob Faibussowitsch PetscCall(MatProductSetFromOptions(C1)); 907dbbe0bcdSBarry Smith PetscUseTypeMethod(C1, productsymbolic); 908076ba34aSJunchao Zhang 9099566063dSJacob Faibussowitsch PetscCall(ISGetIndices(glob, &garray)); 9109566063dSJacob Faibussowitsch PetscCall(ISGetSize(glob, &sz)); 911076ba34aSJunchao Zhang const auto &tmp = ConstMatColIdxKokkosViewHost(garray, sz); /* wrap garray as a view */ 912076ba34aSJunchao Zhang l2g1 = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), tmp); /* maybe just an alias to tmp, so we restore garray at the very end */ 9139566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGetCSRMatrixWithGlobalColumnIds(C1, N, l2g1, mm->C1_global)); 914076ba34aSJunchao Zhang 915076ba34aSJunchao Zhang /* C2 = Ao * B_other. B_other is a matrix consisting of needed rows of B gathered from other procs */ 9169566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosBcast(mm->B_local, MAT_INITIAL_MATRIX, N, l2g1, a->Mvctx, mm->sf, mm->abuf, mm->rows, mm->rowoffset, mm->B_other)); 917076ba34aSJunchao Zhang 918076ba34aSJunchao Zhang /* Compact B_other to use local ids as we guess KK spgemm is more memroy scalable with that; We could skip the compaction to simplify code */ 9199566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCompactOutExtraColumns_SeqAIJKokkos(mm->B_other, l2g2)); 9209566063dSJacob Faibussowitsch PetscCall(MatProductCreate(Ao, mm->B_other, NULL, &C2)); 9219566063dSJacob Faibussowitsch PetscCall(MatProductSetType(C2, MATPRODUCT_AB)); 9229566063dSJacob Faibussowitsch PetscCall(MatProductSetFill(C2, product->fill)); 923076ba34aSJunchao Zhang C2->product->api_user = product->api_user; 9249566063dSJacob Faibussowitsch PetscCall(MatProductSetFromOptions(C2)); 925dbbe0bcdSBarry Smith PetscUseTypeMethod(C2, productsymbolic); 9269566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGetCSRMatrixWithGlobalColumnIds(C2, N, l2g2, mm->C2_global)); 927076ba34aSJunchao Zhang 928076ba34aSJunchao Zhang /* C = C1 + C2. We actually use their global col ids versions in adding */ 929076ba34aSJunchao Zhang mm->kh.create_spadd_handle(false); /* Input C1, C2 are NOT sorted, since B_local, B_other are not */ 930076ba34aSJunchao Zhang KokkosSparse::spadd_symbolic(&mm->kh, mm->C1_global, mm->C2_global, mm->C_global); 931076ba34aSJunchao Zhang /* Have to do numeric since spadd_symbolic does not really populate column indices of the result matrix */ 932076ba34aSJunchao Zhang KokkosSparse::spadd_numeric(&mm->kh, (MatScalarType)1.0, mm->C1_global, (MatScalarType)1.0, mm->C2_global, mm->C_global); 933076ba34aSJunchao Zhang 934076ba34aSJunchao Zhang mm->C1 = C1; 935076ba34aSJunchao Zhang mm->C2 = C2; 9369566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(glob, &garray)); 9379566063dSJacob Faibussowitsch PetscCall(ISDestroy(&glob)); 938*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 939076ba34aSJunchao Zhang } 940076ba34aSJunchao Zhang 941076ba34aSJunchao Zhang /* MatProductSymbolic_MPIAIJKokkos_AtB - A^tB flavor of MatProductSymbolic_MPIAIJKokkos 942076ba34aSJunchao Zhang 943076ba34aSJunchao Zhang Input Parameters: 944076ba34aSJunchao Zhang + product - Mat_Product which carried out the computation. Passed in to access info about this mat product. 945076ba34aSJunchao Zhang . A - an MPIAIJKOKKOS matrix 946076ba34aSJunchao Zhang . B - a SEQAIJKOKKOS matrix. It works as if A^t is multiplied by a parallel matrix made up of Bs on each rank. 947076ba34aSJunchao Zhang . localB - Does B use local col ids? If false, then B is already in global col ids. 948076ba34aSJunchao Zhang . N - col size of the "parallel B matrix". It implies B's global col ids are in range of [0,N) and N is the same across the communicator. 949076ba34aSJunchao Zhang . l2g - If localB, then l2g maps B's local col ids to global ones. 950076ba34aSJunchao Zhang - mm - a struct used to stash intermediate data in AtB 951076ba34aSJunchao Zhang 95211a5261eSBarry Smith Note: The local part of the result C is stored as mm->C_global, which is of type KokkosCsrMatrix and uses global col ids. 953076ba34aSJunchao Zhang */ 954d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSymbolic_MPIAIJKokkos_AtB(Mat_Product *product, Mat A, Mat B, PetscBool localB, PetscInt N, const ConstMatColIdxKokkosView &l2g, MatMatStruct_AtB *mm) 955d71ae5a4SJacob Faibussowitsch { 956076ba34aSJunchao Zhang Mat_MPIAIJ *a = static_cast<Mat_MPIAIJ *>(A->data); 957076ba34aSJunchao Zhang Mat Ad = a->A, Ao = a->B; /* diag and offdiag of A */ 958076ba34aSJunchao Zhang Mat C1, C2; /* intermediate matrices */ 959076ba34aSJunchao Zhang 960076ba34aSJunchao Zhang PetscFunctionBegin; 961076ba34aSJunchao Zhang /* C1 = Ad^t * B */ 9629566063dSJacob Faibussowitsch PetscCall(MatProductCreate(Ad, B, NULL, &C1)); 9639566063dSJacob Faibussowitsch PetscCall(MatProductSetType(C1, MATPRODUCT_AtB)); 9649566063dSJacob Faibussowitsch PetscCall(MatProductSetFill(C1, product->fill)); 965076ba34aSJunchao Zhang C1->product->api_user = product->api_user; 9669566063dSJacob Faibussowitsch PetscCall(MatProductSetFromOptions(C1)); 967dbbe0bcdSBarry Smith PetscUseTypeMethod(C1, productsymbolic); 968076ba34aSJunchao Zhang 9699566063dSJacob Faibussowitsch if (localB) PetscCall(MatSeqAIJKokkosGetCSRMatrixWithGlobalColumnIds(C1, N, l2g, mm->C1_global)); 970076ba34aSJunchao Zhang else mm->C1_global = static_cast<Mat_SeqAIJKokkos *>(C1->spptr)->csrmat; /* the csrmat already uses global col ids */ 971076ba34aSJunchao Zhang 972076ba34aSJunchao Zhang /* C2 = Ao^t * B */ 9739566063dSJacob Faibussowitsch PetscCall(MatProductCreate(Ao, B, NULL, &C2)); 9749566063dSJacob Faibussowitsch PetscCall(MatProductSetType(C2, MATPRODUCT_AtB)); 9759566063dSJacob Faibussowitsch PetscCall(MatProductSetFill(C2, product->fill)); 976076ba34aSJunchao Zhang C2->product->api_user = product->api_user; 9779566063dSJacob Faibussowitsch PetscCall(MatProductSetFromOptions(C2)); 978dbbe0bcdSBarry Smith PetscUseTypeMethod(C2, productsymbolic); 979076ba34aSJunchao Zhang 9809566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosReduce(C2, MAT_INITIAL_MATRIX, localB, N, l2g, a->Mvctx, mm->sf, mm->abuf, mm->srcrowoffset, mm->dstrowoffset, mm->C2_global)); 981076ba34aSJunchao Zhang 982076ba34aSJunchao Zhang mm->kh.create_spadd_handle(false); /* Input C1, C2 are NOT sorted, since B may be not */ 983076ba34aSJunchao Zhang KokkosSparse::spadd_symbolic(&mm->kh, mm->C1_global, mm->C2_global, mm->C_global); 984076ba34aSJunchao Zhang /* Have to do numeric since spadd_symbolic does not really populate column indices of the result matrix */ 985076ba34aSJunchao Zhang KokkosSparse::spadd_numeric(&mm->kh, (MatScalarType)1.0, mm->C1_global, (MatScalarType)1.0, mm->C2_global, mm->C_global); 986076ba34aSJunchao Zhang mm->C1 = C1; 987076ba34aSJunchao Zhang mm->C2 = C2; 988*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 989076ba34aSJunchao Zhang } 990076ba34aSJunchao Zhang 991d71ae5a4SJacob Faibussowitsch PetscErrorCode MatProductNumeric_MPIAIJKokkos(Mat C) 992d71ae5a4SJacob Faibussowitsch { 993076ba34aSJunchao Zhang Mat_Product *product = C->product; 994076ba34aSJunchao Zhang MatProductType ptype; 995076ba34aSJunchao Zhang MatProductData_MPIAIJKokkos *mmdata; 996076ba34aSJunchao Zhang MatMatStruct *mm = NULL; 997076ba34aSJunchao Zhang MatMatStruct_AB *ab; 998076ba34aSJunchao Zhang MatMatStruct_AtB *atb; 999076ba34aSJunchao Zhang Mat A, B, Ad, Ao, Bd, Bo; 1000076ba34aSJunchao Zhang const MatScalarType one = 1.0; /* Not use literal 1.0 directly, to avoid wrong template instantiation in KokkosSparse::spadd_numeric */ 1001076ba34aSJunchao Zhang 1002076ba34aSJunchao Zhang PetscFunctionBegin; 1003076ba34aSJunchao Zhang MatCheckProduct(C, 1); 1004076ba34aSJunchao Zhang mmdata = static_cast<MatProductData_MPIAIJKokkos *>(product->data); 1005076ba34aSJunchao Zhang ptype = product->type; 1006076ba34aSJunchao Zhang A = product->A; 1007076ba34aSJunchao Zhang B = product->B; 1008076ba34aSJunchao Zhang Ad = static_cast<Mat_MPIAIJ *>(A->data)->A; 1009076ba34aSJunchao Zhang Ao = static_cast<Mat_MPIAIJ *>(A->data)->B; 1010076ba34aSJunchao Zhang Bd = static_cast<Mat_MPIAIJ *>(B->data)->A; 1011076ba34aSJunchao Zhang Bo = static_cast<Mat_MPIAIJ *>(B->data)->B; 1012076ba34aSJunchao Zhang 1013076ba34aSJunchao Zhang if (mmdata->reusesym) { /* We reached here through e.g., MatMatMult(A,B,MAT_INITIAL_MATRIX,..,C), where symbolic/numeric are combined */ 1014076ba34aSJunchao Zhang mmdata->reusesym = PETSC_FALSE; /* So that next time when user calls MatMatMult(E,F,MAT_REUSE_MATRIX,..,C), we still do numeric */ 1015076ba34aSJunchao Zhang ab = mmdata->mmAB; 1016076ba34aSJunchao Zhang atb = mmdata->mmAtB; 1017076ba34aSJunchao Zhang if (ab) { 1018076ba34aSJunchao Zhang static_cast<MatProductData_SeqAIJKokkos *>(ab->C1->product->data)->reusesym = PETSC_FALSE; 1019076ba34aSJunchao Zhang static_cast<MatProductData_SeqAIJKokkos *>(ab->C2->product->data)->reusesym = PETSC_FALSE; 1020076ba34aSJunchao Zhang } 1021076ba34aSJunchao Zhang if (atb) { 1022076ba34aSJunchao Zhang static_cast<MatProductData_SeqAIJKokkos *>(atb->C1->product->data)->reusesym = PETSC_FALSE; 1023076ba34aSJunchao Zhang static_cast<MatProductData_SeqAIJKokkos *>(atb->C2->product->data)->reusesym = PETSC_FALSE; 1024076ba34aSJunchao Zhang } 1025*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1026076ba34aSJunchao Zhang } 1027076ba34aSJunchao Zhang 1028076ba34aSJunchao Zhang if (ptype == MATPRODUCT_AB) { 1029076ba34aSJunchao Zhang ab = mmdata->mmAB; 1030076ba34aSJunchao Zhang /* C1 = Ad * B_local */ 103108401ef6SPierre Jolivet PetscCheck(ab->C1->ops->productnumeric && ab->C2->ops->productnumeric, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing numeric op for MATPRODUCT_AB"); 10329566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMatMerge(B, MAT_REUSE_MATRIX, NULL /* glob */, &ab->B_local)); 10335f80ce2aSJacob Faibussowitsch PetscCheck(ab->C1->product->B == ab->B_local, PETSC_COMM_SELF, PETSC_ERR_PLIB, "In MATPRODUCT_AB, internal mat product matrix C1->B has unexpectedly changed"); 10349566063dSJacob Faibussowitsch if (ab->C1->product->A != Ad) PetscCall(MatProductReplaceMats(Ad, NULL, NULL, ab->C1)); 10359566063dSJacob Faibussowitsch PetscCall((*ab->C1->ops->productnumeric)(ab->C1)); 10369371c9d4SSatish Balay PetscCall(MatSeqAIJKokkosBcast(ab->B_local, MAT_REUSE_MATRIX, 0 /* N */, MatColIdxKokkosView() /*l2g*/, NULL /*ownerSF*/, ab->sf, ab->abuf, ab->rows, ab->rowoffset, ab->B_other)); 1037076ba34aSJunchao Zhang /* C2 = Ao * B_other */ 103808401ef6SPierre Jolivet PetscCheck(ab->C2->product->B == ab->B_other, PETSC_COMM_SELF, PETSC_ERR_PLIB, "In MATPRODUCT_AB, internal mat product matrix C2->B has unexpectedly changed"); 10399566063dSJacob Faibussowitsch if (ab->C1->product->A != Ao) PetscCall(MatProductReplaceMats(Ao, NULL, NULL, ab->C2)); 10409566063dSJacob Faibussowitsch PetscCall((*ab->C2->ops->productnumeric)(ab->C2)); 1041076ba34aSJunchao Zhang /* C = C1_global + C2_global */ 1042076ba34aSJunchao Zhang KokkosSparse::spadd_numeric(&ab->kh, one, ab->C1_global, one, ab->C2_global, ab->C_global); 1043076ba34aSJunchao Zhang mm = static_cast<MatMatStruct *>(ab); 1044076ba34aSJunchao Zhang } else if (ptype == MATPRODUCT_AtB) { 1045076ba34aSJunchao Zhang atb = mmdata->mmAtB; 104608401ef6SPierre Jolivet PetscCheck(atb->C1->ops->productnumeric && atb->C2->ops->productnumeric, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing numeric op for MATPRODUCT_AtB"); 1047076ba34aSJunchao Zhang /* C1 = Ad^t * B_local */ 10489566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMatMerge(B, MAT_REUSE_MATRIX, NULL /* glob */, &atb->B_local)); 104908401ef6SPierre Jolivet PetscCheck(atb->C1->product->B == atb->B_local, PETSC_COMM_SELF, PETSC_ERR_PLIB, "In MATPRODUCT_AtB, internal mat product matrix C1->B has unexpectedly changed"); 10509566063dSJacob Faibussowitsch if (atb->C1->product->A != Ad) PetscCall(MatProductReplaceMats(Ad, NULL, NULL, atb->C1)); 10519566063dSJacob Faibussowitsch PetscCall((*atb->C1->ops->productnumeric)(atb->C1)); 1052076ba34aSJunchao Zhang 1053076ba34aSJunchao Zhang /* C2 = Ao^t * B_local */ 105408401ef6SPierre Jolivet PetscCheck(atb->C2->product->B == atb->B_local, PETSC_COMM_SELF, PETSC_ERR_PLIB, "In MATPRODUCT_AtB, internal mat product matrix C2->B has unexpectedly changed"); 10559566063dSJacob Faibussowitsch if (atb->C2->product->A != Ao) PetscCall(MatProductReplaceMats(Ao, NULL, NULL, atb->C2)); 10569566063dSJacob Faibussowitsch PetscCall((*atb->C2->ops->productnumeric)(atb->C2)); 1057076ba34aSJunchao Zhang /* Form C2_global */ 10589371c9d4SSatish Balay PetscCall(MatSeqAIJKokkosReduce(atb->C2, MAT_REUSE_MATRIX, PETSC_TRUE, 0 /* N */, MatColIdxKokkosView() /*l2g*/, NULL /*ownerSF*/, atb->sf, atb->abuf, atb->srcrowoffset, atb->dstrowoffset, atb->C2_global)); 1059076ba34aSJunchao Zhang /* C = C1_global + C2_global */ 1060076ba34aSJunchao Zhang KokkosSparse::spadd_numeric(&atb->kh, one, atb->C1_global, one, atb->C2_global, atb->C_global); 1061076ba34aSJunchao Zhang mm = static_cast<MatMatStruct *>(atb); 1062076ba34aSJunchao Zhang } else if (ptype == MATPRODUCT_PtAP) { /* BtAB */ 1063076ba34aSJunchao Zhang ab = mmdata->mmAB; 10649566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMatMerge(B, MAT_REUSE_MATRIX, NULL /* glob */, &ab->B_local)); 1065076ba34aSJunchao Zhang 1066076ba34aSJunchao Zhang /* ab->C1 = Ad * B_local */ 106708401ef6SPierre Jolivet PetscCheck(ab->C1->product->B == ab->B_local, PETSC_COMM_SELF, PETSC_ERR_PLIB, "In MATPRODUCT_PtAP, internal mat product matrix ab->C1->B has unexpectedly changed"); 10689566063dSJacob Faibussowitsch if (ab->C1->product->A != Ad) PetscCall(MatProductReplaceMats(Ad, NULL, NULL, ab->C1)); 10699566063dSJacob Faibussowitsch PetscCall((*ab->C1->ops->productnumeric)(ab->C1)); 10709371c9d4SSatish Balay PetscCall(MatSeqAIJKokkosBcast(ab->B_local, MAT_REUSE_MATRIX, 0 /* N */, MatColIdxKokkosView() /*l2g*/, NULL /*ownerSF*/, ab->sf, ab->abuf, ab->rows, ab->rowoffset, ab->B_other)); 1071076ba34aSJunchao Zhang /* ab->C2 = Ao * B_other */ 10729566063dSJacob Faibussowitsch if (ab->C2->product->A != Ao) PetscCall(MatProductReplaceMats(Ao, NULL, NULL, ab->C2)); 10739566063dSJacob Faibussowitsch PetscCall((*ab->C2->ops->productnumeric)(ab->C2)); /* C2 = Ao * B_other */ 1074076ba34aSJunchao Zhang KokkosSparse::spadd_numeric(&ab->kh, one, ab->C1_global, one, ab->C2_global, ab->C_global); 1075076ba34aSJunchao Zhang 1076076ba34aSJunchao Zhang /* atb->C1 = Bd^t * ab->C_petsc */ 1077076ba34aSJunchao Zhang atb = mmdata->mmAtB; 107808401ef6SPierre Jolivet PetscCheck(atb->C1->product->B == ab->C_petsc, PETSC_COMM_SELF, PETSC_ERR_PLIB, "In MATPRODUCT_PtAP, internal mat product matrix atb->C1->B has unexpectedly changed"); 10799566063dSJacob Faibussowitsch if (atb->C1->product->A != Bd) PetscCall(MatProductReplaceMats(Bd, NULL, NULL, atb->C1)); 10809566063dSJacob Faibussowitsch PetscCall((*atb->C1->ops->productnumeric)(atb->C1)); 1081076ba34aSJunchao Zhang /* atb->C2 = Bo^t * ab->C_petsc */ 10829566063dSJacob Faibussowitsch if (atb->C2->product->A != Bo) PetscCall(MatProductReplaceMats(Bo, NULL, NULL, atb->C2)); 10839566063dSJacob Faibussowitsch PetscCall((*atb->C2->ops->productnumeric)(atb->C2)); 10849371c9d4SSatish Balay PetscCall(MatSeqAIJKokkosReduce(atb->C2, MAT_REUSE_MATRIX, PETSC_FALSE, 0 /* N */, MatColIdxKokkosView() /*l2g*/, NULL /* ownerSF */, atb->sf, atb->abuf, atb->srcrowoffset, atb->dstrowoffset, atb->C2_global)); 1085076ba34aSJunchao Zhang KokkosSparse::spadd_numeric(&atb->kh, one, atb->C1_global, one, atb->C2_global, atb->C_global); 1086076ba34aSJunchao Zhang mm = static_cast<MatMatStruct *>(atb); 1087076ba34aSJunchao Zhang } 1088076ba34aSJunchao Zhang /* Split C_global to form C */ 10899566063dSJacob Faibussowitsch PetscCall(MatSetMPIAIJKokkosWithGlobalCSRMatrix(C, MAT_REUSE_MATRIX, mm->C_global, mm->Cdstart)); 1090*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1091076ba34aSJunchao Zhang } 1092076ba34aSJunchao Zhang 1093d71ae5a4SJacob Faibussowitsch PetscErrorCode MatProductSymbolic_MPIAIJKokkos(Mat C) 1094d71ae5a4SJacob Faibussowitsch { 1095076ba34aSJunchao Zhang Mat A, B; 1096076ba34aSJunchao Zhang Mat_Product *product = C->product; 1097076ba34aSJunchao Zhang MatProductType ptype; 1098076ba34aSJunchao Zhang MatProductData_MPIAIJKokkos *mmdata; 1099076ba34aSJunchao Zhang MatMatStruct *mm = NULL; 1100076ba34aSJunchao Zhang IS glob = NULL; 1101076ba34aSJunchao Zhang const PetscInt *garray; 1102076ba34aSJunchao Zhang PetscInt m, n, M, N, sz; 1103076ba34aSJunchao Zhang ConstMatColIdxKokkosView l2g; /* map local col ids to global ones */ 1104076ba34aSJunchao Zhang 1105076ba34aSJunchao Zhang PetscFunctionBegin; 1106076ba34aSJunchao Zhang MatCheckProduct(C, 1); 110728b400f6SJacob Faibussowitsch PetscCheck(!product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 1108076ba34aSJunchao Zhang ptype = product->type; 1109076ba34aSJunchao Zhang A = product->A; 1110076ba34aSJunchao Zhang B = product->B; 1111076ba34aSJunchao Zhang 1112076ba34aSJunchao Zhang switch (ptype) { 11139371c9d4SSatish Balay case MATPRODUCT_AB: 11149371c9d4SSatish Balay m = A->rmap->n; 11159371c9d4SSatish Balay n = B->cmap->n; 11169371c9d4SSatish Balay M = A->rmap->N; 11179371c9d4SSatish Balay N = B->cmap->N; 11189371c9d4SSatish Balay break; 11199371c9d4SSatish Balay case MATPRODUCT_AtB: 11209371c9d4SSatish Balay m = A->cmap->n; 11219371c9d4SSatish Balay n = B->cmap->n; 11229371c9d4SSatish Balay M = A->cmap->N; 11239371c9d4SSatish Balay N = B->cmap->N; 11249371c9d4SSatish Balay break; 11259371c9d4SSatish Balay case MATPRODUCT_PtAP: 11269371c9d4SSatish Balay m = B->cmap->n; 11279371c9d4SSatish Balay n = B->cmap->n; 11289371c9d4SSatish Balay M = B->cmap->N; 11299371c9d4SSatish Balay N = B->cmap->N; 11309371c9d4SSatish Balay break; /* BtAB */ 1131d71ae5a4SJacob Faibussowitsch default: 1132d71ae5a4SJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Not for product type %s", MatProductTypes[ptype]); 1133076ba34aSJunchao Zhang } 1134076ba34aSJunchao Zhang 11359566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, m, n, M, N)); 11369566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(C->rmap)); 11379566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(C->cmap)); 11389566063dSJacob Faibussowitsch PetscCall(MatSetType(C, ((PetscObject)A)->type_name)); 1139076ba34aSJunchao Zhang 1140076ba34aSJunchao Zhang mmdata = new MatProductData_MPIAIJKokkos(); 1141076ba34aSJunchao Zhang mmdata->reusesym = product->api_user; 1142076ba34aSJunchao Zhang 1143076ba34aSJunchao Zhang if (ptype == MATPRODUCT_AB) { 1144076ba34aSJunchao Zhang mmdata->mmAB = new MatMatStruct_AB(); 11459566063dSJacob Faibussowitsch PetscCall(MatProductSymbolic_MPIAIJKokkos_AB(product, A, B, mmdata->mmAB)); 1146076ba34aSJunchao Zhang mm = static_cast<MatMatStruct *>(mmdata->mmAB); 1147076ba34aSJunchao Zhang } else if (ptype == MATPRODUCT_AtB) { 1148076ba34aSJunchao Zhang mmdata->mmAtB = new MatMatStruct_AtB(); 1149076ba34aSJunchao Zhang auto atb = mmdata->mmAtB; 11509566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMatMerge(B, MAT_INITIAL_MATRIX, &glob, &atb->B_local)); 11519566063dSJacob Faibussowitsch PetscCall(ISGetIndices(glob, &garray)); 11529566063dSJacob Faibussowitsch PetscCall(ISGetSize(glob, &sz)); 1153076ba34aSJunchao Zhang l2g = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), ConstMatColIdxKokkosViewHost(garray, sz)); 11549566063dSJacob Faibussowitsch PetscCall(MatProductSymbolic_MPIAIJKokkos_AtB(product, A, atb->B_local, PETSC_TRUE, N, l2g, atb)); 11559566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(glob, &garray)); 11569566063dSJacob Faibussowitsch PetscCall(ISDestroy(&glob)); 1157076ba34aSJunchao Zhang mm = static_cast<MatMatStruct *>(atb); 1158076ba34aSJunchao Zhang } else if (ptype == MATPRODUCT_PtAP) { /* BtAB */ 1159076ba34aSJunchao Zhang mmdata->mmAB = new MatMatStruct_AB(); /* tmp=A*B */ 1160076ba34aSJunchao Zhang mmdata->mmAtB = new MatMatStruct_AtB(); /* C=B^t*tmp */ 1161076ba34aSJunchao Zhang auto ab = mmdata->mmAB; 1162076ba34aSJunchao Zhang auto atb = mmdata->mmAtB; 11639566063dSJacob Faibussowitsch PetscCall(MatProductSymbolic_MPIAIJKokkos_AB(product, A, B, ab)); 1164076ba34aSJunchao Zhang auto tmp = new Mat_SeqAIJKokkos(ab->C_global); /* Memory will be owned by ab->C_petsc */ 11659566063dSJacob Faibussowitsch PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PETSC_COMM_SELF, tmp, &ab->C_petsc)); 11669566063dSJacob Faibussowitsch PetscCall(MatProductSymbolic_MPIAIJKokkos_AtB(product, B, ab->C_petsc, PETSC_FALSE, N, l2g /*not used*/, atb)); 1167076ba34aSJunchao Zhang mm = static_cast<MatMatStruct *>(atb); 1168076ba34aSJunchao Zhang } 1169076ba34aSJunchao Zhang /* Split the C_global into petsc A, B format */ 11709566063dSJacob Faibussowitsch PetscCall(MatSetMPIAIJKokkosWithGlobalCSRMatrix(C, MAT_INITIAL_MATRIX, mm->C_global, mm->Cdstart)); 1171076ba34aSJunchao Zhang C->product->data = mmdata; 1172076ba34aSJunchao Zhang C->product->destroy = MatProductDataDestroy_MPIAIJKokkos; 1173076ba34aSJunchao Zhang C->ops->productnumeric = MatProductNumeric_MPIAIJKokkos; 1174*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1175076ba34aSJunchao Zhang } 1176076ba34aSJunchao Zhang 1177d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatProductSetFromOptions_MPIAIJKokkos(Mat mat) 1178d71ae5a4SJacob Faibussowitsch { 1179076ba34aSJunchao Zhang Mat_Product *product = mat->product; 1180076ba34aSJunchao Zhang PetscBool match = PETSC_FALSE; 1181076ba34aSJunchao Zhang PetscBool usecpu = PETSC_FALSE; 1182076ba34aSJunchao Zhang 1183076ba34aSJunchao Zhang PetscFunctionBegin; 1184076ba34aSJunchao Zhang MatCheckProduct(mat, 1); 118548a46eb9SPierre Jolivet if (!product->A->boundtocpu && !product->B->boundtocpu) PetscCall(PetscObjectTypeCompare((PetscObject)product->B, ((PetscObject)product->A)->type_name, &match)); 1186076ba34aSJunchao Zhang if (match) { /* we can always fallback to the CPU if requested */ 1187076ba34aSJunchao Zhang switch (product->type) { 1188076ba34aSJunchao Zhang case MATPRODUCT_AB: 1189076ba34aSJunchao Zhang if (product->api_user) { 1190d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatMatMult", "Mat"); 11919566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-matmatmult_backend_cpu", "Use CPU code", "MatMatMult", usecpu, &usecpu, NULL)); 1192d0609cedSBarry Smith PetscOptionsEnd(); 1193076ba34aSJunchao Zhang } else { 1194d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatProduct_AB", "Mat"); 11959566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu", "Use CPU code", "MatMatMult", usecpu, &usecpu, NULL)); 1196d0609cedSBarry Smith PetscOptionsEnd(); 1197076ba34aSJunchao Zhang } 1198076ba34aSJunchao Zhang break; 1199076ba34aSJunchao Zhang case MATPRODUCT_AtB: 1200076ba34aSJunchao Zhang if (product->api_user) { 1201d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatTransposeMatMult", "Mat"); 12029566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mattransposematmult_backend_cpu", "Use CPU code", "MatTransposeMatMult", usecpu, &usecpu, NULL)); 1203d0609cedSBarry Smith PetscOptionsEnd(); 1204076ba34aSJunchao Zhang } else { 1205d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatProduct_AtB", "Mat"); 12069566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu", "Use CPU code", "MatTransposeMatMult", usecpu, &usecpu, NULL)); 1207d0609cedSBarry Smith PetscOptionsEnd(); 1208076ba34aSJunchao Zhang } 1209076ba34aSJunchao Zhang break; 1210076ba34aSJunchao Zhang case MATPRODUCT_PtAP: 1211076ba34aSJunchao Zhang if (product->api_user) { 1212d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatPtAP", "Mat"); 12139566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-matptap_backend_cpu", "Use CPU code", "MatPtAP", usecpu, &usecpu, NULL)); 1214d0609cedSBarry Smith PetscOptionsEnd(); 1215076ba34aSJunchao Zhang } else { 1216d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatProduct_PtAP", "Mat"); 12179566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu", "Use CPU code", "MatPtAP", usecpu, &usecpu, NULL)); 1218d0609cedSBarry Smith PetscOptionsEnd(); 1219076ba34aSJunchao Zhang } 1220076ba34aSJunchao Zhang break; 1221d71ae5a4SJacob Faibussowitsch default: 1222d71ae5a4SJacob Faibussowitsch break; 1223076ba34aSJunchao Zhang } 1224076ba34aSJunchao Zhang match = (PetscBool)!usecpu; 1225076ba34aSJunchao Zhang } 1226076ba34aSJunchao Zhang if (match) { 1227076ba34aSJunchao Zhang switch (product->type) { 1228076ba34aSJunchao Zhang case MATPRODUCT_AB: 1229076ba34aSJunchao Zhang case MATPRODUCT_AtB: 1230d71ae5a4SJacob Faibussowitsch case MATPRODUCT_PtAP: 1231d71ae5a4SJacob Faibussowitsch mat->ops->productsymbolic = MatProductSymbolic_MPIAIJKokkos; 1232d71ae5a4SJacob Faibussowitsch break; 1233d71ae5a4SJacob Faibussowitsch default: 1234d71ae5a4SJacob Faibussowitsch break; 1235076ba34aSJunchao Zhang } 1236076ba34aSJunchao Zhang } 1237076ba34aSJunchao Zhang /* fallback to MPIAIJ ops */ 123848a46eb9SPierre Jolivet if (!mat->ops->productsymbolic) PetscCall(MatProductSetFromOptions_MPIAIJ(mat)); 1239*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1240076ba34aSJunchao Zhang } 1241076ba34aSJunchao Zhang 1242d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetPreallocationCOO_MPIAIJKokkos(Mat mat, PetscCount coo_n, PetscInt coo_i[], PetscInt coo_j[]) 1243d71ae5a4SJacob Faibussowitsch { 1244394ed5ebSJunchao Zhang Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ *)mat->data; 1245cbc6b225SStefano Zampini Mat_MPIAIJKokkos *mpikok; 124642550becSJunchao Zhang 124742550becSJunchao Zhang PetscFunctionBegin; 124830203840SJunchao Zhang PetscCall(MatSetPreallocationCOO_MPIAIJ(mat, coo_n, coo_i, coo_j)); /* mpiaij->A,B's type is set to seqaijkokkos */ 1249cbc6b225SStefano Zampini mat->preallocated = PETSC_TRUE; 12509566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mat, MAT_FINAL_ASSEMBLY)); 12519566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mat, MAT_FINAL_ASSEMBLY)); 12529566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(mat)); 1253cbc6b225SStefano Zampini mpikok = static_cast<Mat_MPIAIJKokkos *>(mpiaij->spptr); 1254cbc6b225SStefano Zampini delete mpikok; 1255394ed5ebSJunchao Zhang mpiaij->spptr = new Mat_MPIAIJKokkos(mpiaij); 1256*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 125742550becSJunchao Zhang } 125842550becSJunchao Zhang 1259d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetValuesCOO_MPIAIJKokkos(Mat mat, const PetscScalar v[], InsertMode imode) 1260d71ae5a4SJacob Faibussowitsch { 1261394ed5ebSJunchao Zhang Mat_MPIAIJ *mpiaij = static_cast<Mat_MPIAIJ *>(mat->data); 126242550becSJunchao Zhang Mat_MPIAIJKokkos *mpikok = static_cast<Mat_MPIAIJKokkos *>(mpiaij->spptr); 126342550becSJunchao Zhang Mat A = mpiaij->A, B = mpiaij->B; 1264158ec288SJunchao Zhang PetscCount Annz = mpiaij->Annz, Annz2 = mpiaij->Annz2, Bnnz = mpiaij->Bnnz, Bnnz2 = mpiaij->Bnnz2; 126542550becSJunchao Zhang MatScalarKokkosView Aa, Ba; 1266394ed5ebSJunchao Zhang MatScalarKokkosView v1; 126742550becSJunchao Zhang MatScalarKokkosView &vsend = mpikok->sendbuf_d; 126842550becSJunchao Zhang const MatScalarKokkosView &v2 = mpikok->recvbuf_d; 1269158ec288SJunchao Zhang const PetscCountKokkosView &Ajmap1 = mpikok->Ajmap1_d, Ajmap2 = mpikok->Ajmap2_d, Aimap2 = mpikok->Aimap2_d; 1270158ec288SJunchao Zhang const PetscCountKokkosView &Bjmap1 = mpikok->Bjmap1_d, Bjmap2 = mpikok->Bjmap2_d, Bimap2 = mpikok->Bimap2_d; 1271394ed5ebSJunchao Zhang const PetscCountKokkosView &Aperm1 = mpikok->Aperm1_d, Aperm2 = mpikok->Aperm2_d, Bperm1 = mpikok->Bperm1_d, Bperm2 = mpikok->Bperm2_d; 1272394ed5ebSJunchao Zhang const PetscCountKokkosView &Cperm1 = mpikok->Cperm1_d; 127342550becSJunchao Zhang PetscMemType memtype; 127442550becSJunchao Zhang 127542550becSJunchao Zhang PetscFunctionBegin; 12769566063dSJacob Faibussowitsch PetscCall(PetscGetMemType(v, &memtype)); /* Return PETSC_MEMTYPE_HOST when v is NULL */ 127742550becSJunchao Zhang if (PetscMemTypeHost(memtype)) { /* If user gave v[] in host, we need to copy it to device if any */ 1278394ed5ebSJunchao Zhang v1 = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), MatScalarKokkosViewHost((PetscScalar *)v, mpiaij->coo_n)); 127942550becSJunchao Zhang } else { 1280394ed5ebSJunchao Zhang v1 = MatScalarKokkosView((PetscScalar *)v, mpiaij->coo_n); /* Directly use v[]'s memory */ 128142550becSJunchao Zhang } 128242550becSJunchao Zhang 128342550becSJunchao Zhang if (imode == INSERT_VALUES) { 12849566063dSJacob Faibussowitsch PetscCall(MatSeqAIJGetKokkosViewWrite(A, &Aa)); /* write matrix values */ 12859566063dSJacob Faibussowitsch PetscCall(MatSeqAIJGetKokkosViewWrite(B, &Ba)); 1286394ed5ebSJunchao Zhang } else { 12879566063dSJacob Faibussowitsch PetscCall(MatSeqAIJGetKokkosView(A, &Aa)); /* read & write matrix values */ 12889566063dSJacob Faibussowitsch PetscCall(MatSeqAIJGetKokkosView(B, &Ba)); 128942550becSJunchao Zhang } 129042550becSJunchao Zhang 129142550becSJunchao Zhang /* Pack entries to be sent to remote */ 12929371c9d4SSatish Balay Kokkos::parallel_for( 12939371c9d4SSatish Balay vsend.extent(0), KOKKOS_LAMBDA(const PetscCount i) { vsend(i) = v1(Cperm1(i)); }); 129442550becSJunchao Zhang 129542550becSJunchao Zhang /* Send remote entries to their owner and overlap the communication with local computation */ 12969566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(mpiaij->coo_sf, MPIU_SCALAR, PETSC_MEMTYPE_KOKKOS, vsend.data(), PETSC_MEMTYPE_KOKKOS, v2.data(), MPI_REPLACE)); 1297158ec288SJunchao Zhang /* Add local entries to A and B in one kernel */ 12989371c9d4SSatish Balay Kokkos::parallel_for( 12999371c9d4SSatish Balay Annz + Bnnz, KOKKOS_LAMBDA(PetscCount i) { 1300158ec288SJunchao Zhang PetscScalar sum = 0.0; 1301158ec288SJunchao Zhang if (i < Annz) { 1302158ec288SJunchao Zhang for (PetscCount k = Ajmap1(i); k < Ajmap1(i + 1); k++) sum += v1(Aperm1(k)); 1303ac38520cSJunchao Zhang Aa(i) = (imode == INSERT_VALUES ? 0.0 : Aa(i)) + sum; 1304158ec288SJunchao Zhang } else { 1305158ec288SJunchao Zhang i -= Annz; 1306158ec288SJunchao Zhang for (PetscCount k = Bjmap1(i); k < Bjmap1(i + 1); k++) sum += v1(Bperm1(k)); 1307ac38520cSJunchao Zhang Ba(i) = (imode == INSERT_VALUES ? 0.0 : Ba(i)) + sum; 1308158ec288SJunchao Zhang } 1309158ec288SJunchao Zhang }); 13109566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(mpiaij->coo_sf, MPIU_SCALAR, vsend.data(), v2.data(), MPI_REPLACE)); 131142550becSJunchao Zhang 1312158ec288SJunchao Zhang /* Add received remote entries to A and B in one kernel */ 13139371c9d4SSatish Balay Kokkos::parallel_for( 13149371c9d4SSatish Balay Annz2 + Bnnz2, KOKKOS_LAMBDA(PetscCount i) { 1315158ec288SJunchao Zhang if (i < Annz2) { 1316158ec288SJunchao Zhang for (PetscCount k = Ajmap2(i); k < Ajmap2(i + 1); k++) Aa(Aimap2(i)) += v2(Aperm2(k)); 1317158ec288SJunchao Zhang } else { 1318158ec288SJunchao Zhang i -= Annz2; 1319158ec288SJunchao Zhang for (PetscCount k = Bjmap2(i); k < Bjmap2(i + 1); k++) Ba(Bimap2(i)) += v2(Bperm2(k)); 1320158ec288SJunchao Zhang } 1321158ec288SJunchao Zhang }); 132242550becSJunchao Zhang 1323394ed5ebSJunchao Zhang if (imode == INSERT_VALUES) { 13249566063dSJacob Faibussowitsch PetscCall(MatSeqAIJRestoreKokkosViewWrite(A, &Aa)); /* Increase A & B's state etc. */ 13259566063dSJacob Faibussowitsch PetscCall(MatSeqAIJRestoreKokkosViewWrite(B, &Ba)); 1326394ed5ebSJunchao Zhang } else { 13279566063dSJacob Faibussowitsch PetscCall(MatSeqAIJRestoreKokkosView(A, &Aa)); 13289566063dSJacob Faibussowitsch PetscCall(MatSeqAIJRestoreKokkosView(B, &Ba)); 1329394ed5ebSJunchao Zhang } 1330*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 133142550becSJunchao Zhang } 133242550becSJunchao Zhang 1333d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDestroy_MPIAIJKokkos(Mat A) 1334d71ae5a4SJacob Faibussowitsch { 133542550becSJunchao Zhang Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ *)A->data; 1336076ba34aSJunchao Zhang 1337076ba34aSJunchao Zhang PetscFunctionBegin; 13389566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMPIAIJSetPreallocation_C", NULL)); 13399566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMPIAIJGetLocalMatMerge_C", NULL)); 13409566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetPreallocationCOO_C", NULL)); 13419566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetValuesCOO_C", NULL)); 134242550becSJunchao Zhang delete (Mat_MPIAIJKokkos *)mpiaij->spptr; 13439566063dSJacob Faibussowitsch PetscCall(MatDestroy_MPIAIJ(A)); 1344*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1345076ba34aSJunchao Zhang } 1346076ba34aSJunchao Zhang 1347d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIAIJKokkos(Mat A, MatType mtype, MatReuse reuse, Mat *newmat) 1348d71ae5a4SJacob Faibussowitsch { 13498c3ff71bSJunchao Zhang Mat B; 1350076ba34aSJunchao Zhang Mat_MPIAIJ *a; 13518c3ff71bSJunchao Zhang 13528c3ff71bSJunchao Zhang PetscFunctionBegin; 13538c3ff71bSJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { 13549566063dSJacob Faibussowitsch PetscCall(MatDuplicate(A, MAT_COPY_VALUES, newmat)); 13558c3ff71bSJunchao Zhang } else if (reuse == MAT_REUSE_MATRIX) { 13569566063dSJacob Faibussowitsch PetscCall(MatCopy(A, *newmat, SAME_NONZERO_PATTERN)); 13578c3ff71bSJunchao Zhang } 13588c3ff71bSJunchao Zhang B = *newmat; 13598c3ff71bSJunchao Zhang 13606f3d89d0SStefano Zampini B->boundtocpu = PETSC_FALSE; 13619566063dSJacob Faibussowitsch PetscCall(PetscFree(B->defaultvectype)); 13629566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(VECKOKKOS, &B->defaultvectype)); 13639566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)B, MATMPIAIJKOKKOS)); 13648c3ff71bSJunchao Zhang 1365076ba34aSJunchao Zhang a = static_cast<Mat_MPIAIJ *>(A->data); 13669566063dSJacob Faibussowitsch if (a->A) PetscCall(MatSetType(a->A, MATSEQAIJKOKKOS)); 13679566063dSJacob Faibussowitsch if (a->B) PetscCall(MatSetType(a->B, MATSEQAIJKOKKOS)); 13689566063dSJacob Faibussowitsch if (a->lvec) PetscCall(VecSetType(a->lvec, VECSEQKOKKOS)); 1369076ba34aSJunchao Zhang 13708c3ff71bSJunchao Zhang B->ops->assemblyend = MatAssemblyEnd_MPIAIJKokkos; 13718c3ff71bSJunchao Zhang B->ops->mult = MatMult_MPIAIJKokkos; 13728c3ff71bSJunchao Zhang B->ops->multadd = MatMultAdd_MPIAIJKokkos; 13738c3ff71bSJunchao Zhang B->ops->multtranspose = MatMultTranspose_MPIAIJKokkos; 1374076ba34aSJunchao Zhang B->ops->productsetfromoptions = MatProductSetFromOptions_MPIAIJKokkos; 1375076ba34aSJunchao Zhang B->ops->destroy = MatDestroy_MPIAIJKokkos; 13768c3ff71bSJunchao Zhang 13779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatMPIAIJSetPreallocation_C", MatMPIAIJSetPreallocation_MPIAIJKokkos)); 13789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatMPIAIJGetLocalMatMerge_C", MatMPIAIJGetLocalMatMerge_MPIAIJKokkos)); 13799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatSetPreallocationCOO_C", MatSetPreallocationCOO_MPIAIJKokkos)); 13809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatSetValuesCOO_C", MatSetValuesCOO_MPIAIJKokkos)); 1381*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 13828c3ff71bSJunchao Zhang } 13833f3ba80aSJunchao Zhang /*MC 138411a5261eSBarry Smith MATAIJKOKKOS - "mpiaijkokkos", a matrix type to be used for CSR sparse matrices with Kokkos 13858c3ff71bSJunchao Zhang 13863f3ba80aSJunchao Zhang A matrix type type using Kokkos-Kernels CrsMatrix type for portability across different device types 13873f3ba80aSJunchao Zhang 13883f3ba80aSJunchao Zhang Options Database Keys: 13893f3ba80aSJunchao Zhang . -mat_type aijkokkos - sets the matrix type to "aijkokkos" during a call to MatSetFromOptions() 13903f3ba80aSJunchao Zhang 13913f3ba80aSJunchao Zhang Level: beginner 13923f3ba80aSJunchao Zhang 139311a5261eSBarry Smith .seealso: `MatCreateAIJKokkos()`, `MATSEQAIJKOKKOS`, `MATSEQAIJ`, `MATMPIAIJ` 13943f3ba80aSJunchao Zhang M*/ 1395d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatCreate_MPIAIJKokkos(Mat A) 1396d71ae5a4SJacob Faibussowitsch { 13978c3ff71bSJunchao Zhang PetscFunctionBegin; 13989566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 13999566063dSJacob Faibussowitsch PetscCall(MatCreate_MPIAIJ(A)); 14009566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIAIJ_MPIAIJKokkos(A, MATMPIAIJKOKKOS, MAT_INPLACE_MATRIX, &A)); 1401*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14028c3ff71bSJunchao Zhang } 14038c3ff71bSJunchao Zhang 14048c3ff71bSJunchao Zhang /*@C 140511a5261eSBarry Smith MatCreateAIJKokkos - Creates a sparse matrix in `MATAIJKOKOS` (compressed row) format 14068c3ff71bSJunchao Zhang (the default parallel PETSc format). This matrix will ultimately pushed down 14078c3ff71bSJunchao Zhang to Kokkos for calculations. For good matrix 14088c3ff71bSJunchao Zhang assembly performance the user should preallocate the matrix storage by setting 14098c3ff71bSJunchao Zhang the parameter nz (or the array nnz). By setting these parameters accurately, 14108c3ff71bSJunchao Zhang performance during matrix assembly can be increased by more than a factor of 50. 14118c3ff71bSJunchao Zhang 14128c3ff71bSJunchao Zhang Collective 14138c3ff71bSJunchao Zhang 14148c3ff71bSJunchao Zhang Input Parameters: 141511a5261eSBarry Smith + comm - MPI communicator, set to `PETSC_COMM_SELF` 14168c3ff71bSJunchao Zhang . m - number of rows 14178c3ff71bSJunchao Zhang . n - number of columns 14188c3ff71bSJunchao Zhang . nz - number of nonzeros per row (same for all rows) 14198c3ff71bSJunchao Zhang - nnz - array containing the number of nonzeros in the various rows 14208c3ff71bSJunchao Zhang (possibly different for each row) or NULL 14218c3ff71bSJunchao Zhang 14228c3ff71bSJunchao Zhang Output Parameter: 14238c3ff71bSJunchao Zhang . A - the matrix 14248c3ff71bSJunchao Zhang 142511a5261eSBarry Smith It is recommended that one use the `MatCreate()`, `MatSetType()` and/or `MatSetFromOptions()`, 14268c3ff71bSJunchao Zhang MatXXXXSetPreallocation() paradigm instead of this routine directly. 142711a5261eSBarry Smith [MatXXXXSetPreallocation() is, for example, `MatSeqAIJSetPreallocation()`] 14288c3ff71bSJunchao Zhang 14298c3ff71bSJunchao Zhang Notes: 14308c3ff71bSJunchao Zhang If nnz is given then nz is ignored 14318c3ff71bSJunchao Zhang 143211a5261eSBarry Smith The AIJ format, also called compressed row storage), is fully compatible with standard Fortran 77 14338c3ff71bSJunchao Zhang storage. That is, the stored row and column indices can begin at 14348c3ff71bSJunchao Zhang either one (as in Fortran) or zero. See the users' manual for details. 14358c3ff71bSJunchao Zhang 14368c3ff71bSJunchao Zhang Specify the preallocated storage with either nz or nnz (not both). 143711a5261eSBarry Smith Set nz = `PETSC_DEFAULT` and nnz = NULL for PETSc to control dynamic memory 14388c3ff71bSJunchao Zhang allocation. For large problems you MUST preallocate memory or you 14398c3ff71bSJunchao Zhang will get TERRIBLE performance, see the users' manual chapter on matrices. 14408c3ff71bSJunchao Zhang 14418c3ff71bSJunchao Zhang By default, this format uses inodes (identical nodes) when possible, to 14428c3ff71bSJunchao Zhang improve numerical efficiency of matrix-vector products and solves. We 14438c3ff71bSJunchao Zhang search for consecutive rows with the same nonzero structure, thereby 14448c3ff71bSJunchao Zhang reusing matrix information to achieve increased efficiency. 14458c3ff71bSJunchao Zhang 14468c3ff71bSJunchao Zhang Level: intermediate 14478c3ff71bSJunchao Zhang 144811a5261eSBarry Smith .seealso: `MATAIJKOKOS`, `MATSEQAIJKOKOS`, `MATMPIAIJKOKOS`, `MatCreate()`, `MatCreateAIJ()`, `MatSetValues()`, `MatSeqAIJSetColumnIndices()`, `MatCreateSeqAIJWithArrays()`, `MatCreateAIJ()`, `MATMPIAIJKOKKOS`, `MATAIJKOKKOS` 14498c3ff71bSJunchao Zhang @*/ 1450d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateAIJKokkos(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscInt d_nz, const PetscInt d_nnz[], PetscInt o_nz, const PetscInt o_nnz[], Mat *A) 1451d71ae5a4SJacob Faibussowitsch { 14528c3ff71bSJunchao Zhang PetscMPIInt size; 14538c3ff71bSJunchao Zhang 14548c3ff71bSJunchao Zhang PetscFunctionBegin; 14559566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 14569566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, M, N)); 14579566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 14588c3ff71bSJunchao Zhang if (size > 1) { 14599566063dSJacob Faibussowitsch PetscCall(MatSetType(*A, MATMPIAIJKOKKOS)); 14609566063dSJacob Faibussowitsch PetscCall(MatMPIAIJSetPreallocation(*A, d_nz, d_nnz, o_nz, o_nnz)); 14618c3ff71bSJunchao Zhang } else { 14629566063dSJacob Faibussowitsch PetscCall(MatSetType(*A, MATSEQAIJKOKKOS)); 14639566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation(*A, d_nz, d_nnz)); 14648c3ff71bSJunchao Zhang } 1465*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14668c3ff71bSJunchao Zhang } 14678c3ff71bSJunchao Zhang 1468a587d139SMark // get GPU pointer to stripped down Mat. For both Seq and MPI Mat. 1469d71ae5a4SJacob Faibussowitsch PetscErrorCode MatKokkosGetDeviceMatWrite(Mat A, PetscSplitCSRDataStructure *B) 1470d71ae5a4SJacob Faibussowitsch { 1471a587d139SMark PetscMPIInt size, rank; 1472a587d139SMark MPI_Comm comm; 1473042217e8SBarry Smith PetscSplitCSRDataStructure d_mat = NULL; 1474a587d139SMark 1475a587d139SMark PetscFunctionBegin; 14769566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 14779566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 14789566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 1479a587d139SMark if (size == 1) { 14809566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGetDeviceMat(A, &d_mat)); 14819566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(A)); /* Since we are going to modify matrix values on device */ 1482a587d139SMark } else { 1483a587d139SMark Mat_MPIAIJ *aij = (Mat_MPIAIJ *)A->data; 14849566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGetDeviceMat(aij->A, &d_mat)); 14859566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(aij->A)); 14869566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(aij->B)); 14872c71b3e2SJacob Faibussowitsch PetscCheck(A->nooffprocentries || aij->donotstash, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Device assembly does not currently support offproc values insertion. Use MatSetOption(A,MAT_NO_OFF_PROC_ENTRIES,PETSC_TRUE) or MatSetOption(A,MAT_IGNORE_OFF_PROC_ENTRIES,PETSC_TRUE)"); 1488a587d139SMark } 1489a587d139SMark // act like MatSetValues because not called on host 1490a587d139SMark if (A->assembled) { 149148a46eb9SPierre Jolivet if (A->was_assembled) PetscCall(PetscInfo(A, "Assemble more than once already\n")); 1492a587d139SMark A->was_assembled = PETSC_TRUE; // this is done (lazy) in MatAssemble but we are not calling it anymore - done in AIJ AssemblyEnd, need here? 1493a587d139SMark } else { 14949566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Warning !assemble ??? assembled=%" PetscInt_FMT "\n", A->assembled)); 1495a587d139SMark } 1496a587d139SMark if (!d_mat) { 1497042217e8SBarry Smith struct _n_SplitCSRMat h_mat; /* host container */ 1498a587d139SMark Mat_SeqAIJKokkos *aijkokA; 1499a587d139SMark Mat_SeqAIJ *jaca; 1500a587d139SMark PetscInt n = A->rmap->n, nnz; 1501a587d139SMark Mat Amat; 1502042217e8SBarry Smith PetscInt *colmap; 1503042217e8SBarry Smith 1504042217e8SBarry Smith /* create and copy h_mat */ 150549b994a9SMark Adams h_mat.M = A->cmap->N; // use for debug build 15069566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Create device matrix in Kokkos\n")); 1507a587d139SMark if (size == 1) { 1508a587d139SMark Amat = A; 1509a587d139SMark jaca = (Mat_SeqAIJ *)A->data; 15109371c9d4SSatish Balay h_mat.rstart = 0; 15119371c9d4SSatish Balay h_mat.rend = A->rmap->n; 15129371c9d4SSatish Balay h_mat.cstart = 0; 15139371c9d4SSatish Balay h_mat.cend = A->cmap->n; 1514a587d139SMark h_mat.offdiag.i = h_mat.offdiag.j = NULL; 1515a587d139SMark h_mat.offdiag.a = NULL; 1516a587d139SMark aijkokA = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1517a587d139SMark } else { 1518a587d139SMark Mat_MPIAIJ *aij = (Mat_MPIAIJ *)A->data; 1519a587d139SMark Mat_SeqAIJ *jacb = (Mat_SeqAIJ *)aij->B->data; 1520a587d139SMark PetscInt ii; 1521a587d139SMark Mat_SeqAIJKokkos *aijkokB; 1522042217e8SBarry Smith 1523a587d139SMark Amat = aij->A; 1524a587d139SMark aijkokA = static_cast<Mat_SeqAIJKokkos *>(aij->A->spptr); 1525a587d139SMark aijkokB = static_cast<Mat_SeqAIJKokkos *>(aij->B->spptr); 1526a587d139SMark jaca = (Mat_SeqAIJ *)aij->A->data; 152708401ef6SPierre Jolivet PetscCheck(!aij->B->cmap->n || aij->garray, comm, PETSC_ERR_PLIB, "MPIAIJ Matrix was assembled but is missing garray"); 152808401ef6SPierre Jolivet PetscCheck(aij->B->rmap->n == aij->A->rmap->n, comm, PETSC_ERR_SUP, "Only support aij->B->rmap->n == aij->A->rmap->n"); 1529a587d139SMark aij->donotstash = PETSC_TRUE; 1530a587d139SMark aij->A->nooffprocentries = aij->B->nooffprocentries = A->nooffprocentries = PETSC_TRUE; 1531a5b23f4aSJose E. Roman jaca->nonew = jacb->nonew = PETSC_TRUE; // no more disassembly 15329566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(A->cmap->N, &colmap)); 1533042217e8SBarry Smith for (ii = 0; ii < aij->B->cmap->n; ii++) colmap[aij->garray[ii]] = ii + 1; 1534a587d139SMark // allocate B copy data 15359371c9d4SSatish Balay h_mat.rstart = A->rmap->rstart; 15369371c9d4SSatish Balay h_mat.rend = A->rmap->rend; 15379371c9d4SSatish Balay h_mat.cstart = A->cmap->rstart; 15389371c9d4SSatish Balay h_mat.cend = A->cmap->rend; 1539a587d139SMark nnz = jacb->i[n]; 1540a587d139SMark if (jacb->compressedrow.use) { 1541a587d139SMark const Kokkos::View<PetscInt *, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_i_k(jacb->i, n + 1); 1542300d22a6SJunchao Zhang aijkokB->i_uncompressed_d = Kokkos::View<PetscInt *>(Kokkos::create_mirror(DefaultMemorySpace(), h_i_k)); 1543300d22a6SJunchao Zhang Kokkos::deep_copy(aijkokB->i_uncompressed_d, h_i_k); 1544300d22a6SJunchao Zhang h_mat.offdiag.i = aijkokB->i_uncompressed_d.data(); 1545a587d139SMark } else { 154699551766SMark Adams h_mat.offdiag.i = aijkokB->i_device_data(); 1547a587d139SMark } 154899551766SMark Adams h_mat.offdiag.j = aijkokB->j_device_data(); 1549076ba34aSJunchao Zhang h_mat.offdiag.a = aijkokB->a_device_data(); 1550a587d139SMark { 1551042217e8SBarry Smith Kokkos::View<PetscInt *, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_colmap_k(colmap, A->cmap->N); 1552300d22a6SJunchao Zhang aijkokB->colmap_d = Kokkos::View<PetscInt *>(Kokkos::create_mirror(DefaultMemorySpace(), h_colmap_k)); 1553300d22a6SJunchao Zhang Kokkos::deep_copy(aijkokB->colmap_d, h_colmap_k); 1554300d22a6SJunchao Zhang h_mat.colmap = aijkokB->colmap_d.data(); 15559566063dSJacob Faibussowitsch PetscCall(PetscFree(colmap)); 1556a587d139SMark } 1557a587d139SMark h_mat.offdiag.ignorezeroentries = jacb->ignorezeroentries; 1558a587d139SMark h_mat.offdiag.n = n; 1559a587d139SMark } 1560a587d139SMark // allocate A copy data 1561a587d139SMark nnz = jaca->i[n]; 1562a587d139SMark h_mat.diag.n = n; 1563a587d139SMark h_mat.diag.ignorezeroentries = jaca->ignorezeroentries; 15649566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &h_mat.rank)); 1565d5b43468SJose E. Roman PetscCheck(!jaca->compressedrow.use, PETSC_COMM_SELF, PETSC_ERR_PLIB, "A does not support compressed row (todo)"); 156699551766SMark Adams h_mat.diag.i = aijkokA->i_device_data(); 156799551766SMark Adams h_mat.diag.j = aijkokA->j_device_data(); 1568076ba34aSJunchao Zhang h_mat.diag.a = aijkokA->a_device_data(); 1569a587d139SMark // copy pointers and metdata to device 15709566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSetDeviceMat(Amat, &h_mat)); 15719566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGetDeviceMat(Amat, &d_mat)); 15729566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Create device Mat n=%" PetscInt_FMT " nnz=%" PetscInt_FMT "\n", h_mat.diag.n, nnz)); 1573a587d139SMark } 1574a587d139SMark *B = d_mat; // return it, set it in Mat, and set it up 1575a587d139SMark A->assembled = PETSC_FALSE; // ready to write with matsetvalues - this done (lazy) in normal MatSetValues 1576*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1577a587d139SMark } 1578076ba34aSJunchao Zhang 1579d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatSeqAIJKokkosGetOffloadMask(Mat A, const char **mask) 1580d71ae5a4SJacob Faibussowitsch { 1581076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1582076ba34aSJunchao Zhang 1583076ba34aSJunchao Zhang PetscFunctionBegin; 1584076ba34aSJunchao Zhang if (!aijkok) *mask = "AIJKOK_UNALLOCATED"; 1585076ba34aSJunchao Zhang else if (aijkok->a_dual.need_sync_host()) *mask = "PETSC_OFFLOAD_GPU"; 1586076ba34aSJunchao Zhang else if (aijkok->a_dual.need_sync_device()) *mask = "PETSC_OFFLOAD_CPU"; 1587076ba34aSJunchao Zhang else *mask = "PETSC_OFFLOAD_BOTH"; 1588*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1589076ba34aSJunchao Zhang } 1590076ba34aSJunchao Zhang 1591d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatAIJKokkosPrintOffloadMask(Mat A) 1592d71ae5a4SJacob Faibussowitsch { 1593076ba34aSJunchao Zhang PetscMPIInt size; 1594076ba34aSJunchao Zhang Mat Ad, Ao; 1595076ba34aSJunchao Zhang const char *amask, *bmask; 1596076ba34aSJunchao Zhang 1597076ba34aSJunchao Zhang PetscFunctionBegin; 15989566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1599076ba34aSJunchao Zhang 1600076ba34aSJunchao Zhang if (size == 1) { 16019566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGetOffloadMask(A, &amask)); 16029566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF, "%s\n", amask)); 1603076ba34aSJunchao Zhang } else { 1604076ba34aSJunchao Zhang Ad = ((Mat_MPIAIJ *)A->data)->A; 1605076ba34aSJunchao Zhang Ao = ((Mat_MPIAIJ *)A->data)->B; 16069566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGetOffloadMask(Ad, &amask)); 16079566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGetOffloadMask(Ao, &bmask)); 16089566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF, "Diag : Off-diag = %s : %s\n", amask, bmask)); 1609076ba34aSJunchao Zhang } 1610*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1611076ba34aSJunchao Zhang } 1612