xref: /petsc/src/mat/impls/aij/mpi/kokkos/mpiaijkok.kokkos.cxx (revision aaa8cc7d2a5c3913edcbb923e20f154fe9c4aa65)
111d22bbfSJunchao Zhang #include <petscvec_kokkos.hpp>
2f0e6e2d1SJunchao Zhang #include <petscpkg_version.h>
3076ba34aSJunchao Zhang #include <petscsf.h>
442550becSJunchao Zhang #include <petsc/private/sfimpl.h>
58c3ff71bSJunchao Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h>
642550becSJunchao Zhang #include <../src/mat/impls/aij/mpi/kokkos/mpiaijkok.hpp>
7076ba34aSJunchao Zhang #include <KokkosSparse_spadd.hpp>
80e3ece09SJunchao Zhang #include <KokkosSparse_spgemm.hpp>
911d22bbfSJunchao Zhang 
10d71ae5a4SJacob Faibussowitsch PetscErrorCode MatAssemblyEnd_MPIAIJKokkos(Mat A, MatAssemblyType mode)
11d71ae5a4SJacob Faibussowitsch {
125519a089SJose E. Roman   Mat_SeqAIJKokkos *aijkok;
1330203840SJunchao Zhang   Mat_MPIAIJ       *mpiaij = (Mat_MPIAIJ *)A->data;
148c3ff71bSJunchao Zhang 
158c3ff71bSJunchao Zhang   PetscFunctionBegin;
169566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd_MPIAIJ(A, mode));
1730203840SJunchao Zhang   /* E.g., MatCreateSubMatrix() calls MatCreateMPIAIJWithSeqAIJ(comm,A,B,..), which creates Bnew of SEQAIJ and destroys B of SEQAIJKOKKOS.
1830203840SJunchao Zhang      Thus we finalize A/B/lvec's type in MatAssemblyEnd() to handle various cases.
1930203840SJunchao Zhang    */
2030203840SJunchao Zhang   if (mode == MAT_FINAL_ASSEMBLY) {
2130203840SJunchao Zhang     PetscCall(MatSetType(mpiaij->A, MATSEQAIJKOKKOS));
2230203840SJunchao Zhang     PetscCall(MatSetType(mpiaij->B, MATSEQAIJKOKKOS));
2330203840SJunchao Zhang     PetscCall(VecSetType(mpiaij->lvec, VECSEQKOKKOS));
2430203840SJunchao Zhang   }
255519a089SJose E. Roman   aijkok = static_cast<Mat_SeqAIJKokkos *>(((Mat_MPIAIJ *)A->data)->A->spptr); /* Access spptr after MatAssemblyEnd_MPIAIJ(), which might have deleted old spptr */
26a587d139SMark   if (aijkok && aijkok->device_mat_d.data()) {
27a587d139SMark     A->offloadmask = PETSC_OFFLOAD_GPU; // in GPU mode, no going back. MatSetValues checks this
28a587d139SMark   }
29a587d139SMark 
303ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
318c3ff71bSJunchao Zhang }
328c3ff71bSJunchao Zhang 
33d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMPIAIJSetPreallocation_MPIAIJKokkos(Mat mat, PetscInt d_nz, const PetscInt d_nnz[], PetscInt o_nz, const PetscInt o_nnz[])
34d71ae5a4SJacob Faibussowitsch {
358c3ff71bSJunchao Zhang   Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ *)mat->data;
368c3ff71bSJunchao Zhang 
378c3ff71bSJunchao Zhang   PetscFunctionBegin;
389566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(mat->rmap));
399566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(mat->cmap));
406a29ce69SStefano Zampini #if defined(PETSC_USE_DEBUG)
418c3ff71bSJunchao Zhang   if (d_nnz) {
426a29ce69SStefano Zampini     PetscInt i;
43ad540459SPierre Jolivet     for (i = 0; i < mat->rmap->n; i++) PetscCheck(d_nnz[i] >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "d_nnz cannot be less than 0: local row %" PetscInt_FMT " value %" PetscInt_FMT, i, d_nnz[i]);
448c3ff71bSJunchao Zhang   }
458c3ff71bSJunchao Zhang   if (o_nnz) {
466a29ce69SStefano Zampini     PetscInt i;
47ad540459SPierre Jolivet     for (i = 0; i < mat->rmap->n; i++) PetscCheck(o_nnz[i] >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "o_nnz cannot be less than 0: local row %" PetscInt_FMT " value %" PetscInt_FMT, i, o_nnz[i]);
488c3ff71bSJunchao Zhang   }
496a29ce69SStefano Zampini #endif
506a29ce69SStefano Zampini #if defined(PETSC_USE_CTABLE)
51eec179cfSJacob Faibussowitsch   PetscCall(PetscHMapIDestroy(&mpiaij->colmap));
526a29ce69SStefano Zampini #else
539566063dSJacob Faibussowitsch   PetscCall(PetscFree(mpiaij->colmap));
546a29ce69SStefano Zampini #endif
559566063dSJacob Faibussowitsch   PetscCall(PetscFree(mpiaij->garray));
569566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&mpiaij->lvec));
579566063dSJacob Faibussowitsch   PetscCall(VecScatterDestroy(&mpiaij->Mvctx));
586a29ce69SStefano Zampini   /* Because the B will have been resized we simply destroy it and create a new one each time */
599566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&mpiaij->B));
606a29ce69SStefano Zampini 
616a29ce69SStefano Zampini   if (!mpiaij->A) {
629566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF, &mpiaij->A));
639566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(mpiaij->A, mat->rmap->n, mat->cmap->n, mat->rmap->n, mat->cmap->n));
646a29ce69SStefano Zampini   }
656a29ce69SStefano Zampini   if (!mpiaij->B) {
666a29ce69SStefano Zampini     PetscMPIInt size;
679566063dSJacob Faibussowitsch     PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)mat), &size));
689566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF, &mpiaij->B));
699566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(mpiaij->B, mat->rmap->n, size > 1 ? mat->cmap->N : 0, mat->rmap->n, size > 1 ? mat->cmap->N : 0));
708c3ff71bSJunchao Zhang   }
719566063dSJacob Faibussowitsch   PetscCall(MatSetType(mpiaij->A, MATSEQAIJKOKKOS));
729566063dSJacob Faibussowitsch   PetscCall(MatSetType(mpiaij->B, MATSEQAIJKOKKOS));
739566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJSetPreallocation(mpiaij->A, d_nz, d_nnz));
749566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJSetPreallocation(mpiaij->B, o_nz, o_nnz));
758c3ff71bSJunchao Zhang   mat->preallocated = PETSC_TRUE;
763ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
778c3ff71bSJunchao Zhang }
788c3ff71bSJunchao Zhang 
79d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMult_MPIAIJKokkos(Mat mat, Vec xx, Vec yy)
80d71ae5a4SJacob Faibussowitsch {
818c3ff71bSJunchao Zhang   Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ *)mat->data;
828c3ff71bSJunchao Zhang   PetscInt    nt;
838c3ff71bSJunchao Zhang 
848c3ff71bSJunchao Zhang   PetscFunctionBegin;
859566063dSJacob Faibussowitsch   PetscCall(VecGetLocalSize(xx, &nt));
8608401ef6SPierre Jolivet   PetscCheck(nt == mat->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Incompatible partition of mat (%" PetscInt_FMT ") and xx (%" PetscInt_FMT ")", mat->cmap->n, nt);
879566063dSJacob Faibussowitsch   PetscCall(VecScatterBegin(mpiaij->Mvctx, xx, mpiaij->lvec, INSERT_VALUES, SCATTER_FORWARD));
889566063dSJacob Faibussowitsch   PetscCall((*mpiaij->A->ops->mult)(mpiaij->A, xx, yy));
899566063dSJacob Faibussowitsch   PetscCall(VecScatterEnd(mpiaij->Mvctx, xx, mpiaij->lvec, INSERT_VALUES, SCATTER_FORWARD));
909566063dSJacob Faibussowitsch   PetscCall((*mpiaij->B->ops->multadd)(mpiaij->B, mpiaij->lvec, yy, yy));
913ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
928c3ff71bSJunchao Zhang }
938c3ff71bSJunchao Zhang 
94d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMultAdd_MPIAIJKokkos(Mat mat, Vec xx, Vec yy, Vec zz)
95d71ae5a4SJacob Faibussowitsch {
968c3ff71bSJunchao Zhang   Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ *)mat->data;
978c3ff71bSJunchao Zhang   PetscInt    nt;
988c3ff71bSJunchao Zhang 
998c3ff71bSJunchao Zhang   PetscFunctionBegin;
1009566063dSJacob Faibussowitsch   PetscCall(VecGetLocalSize(xx, &nt));
10108401ef6SPierre Jolivet   PetscCheck(nt == mat->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Incompatible partition of mat (%" PetscInt_FMT ") and xx (%" PetscInt_FMT ")", mat->cmap->n, nt);
1029566063dSJacob Faibussowitsch   PetscCall(VecScatterBegin(mpiaij->Mvctx, xx, mpiaij->lvec, INSERT_VALUES, SCATTER_FORWARD));
1039566063dSJacob Faibussowitsch   PetscCall((*mpiaij->A->ops->multadd)(mpiaij->A, xx, yy, zz));
1049566063dSJacob Faibussowitsch   PetscCall(VecScatterEnd(mpiaij->Mvctx, xx, mpiaij->lvec, INSERT_VALUES, SCATTER_FORWARD));
1059566063dSJacob Faibussowitsch   PetscCall((*mpiaij->B->ops->multadd)(mpiaij->B, mpiaij->lvec, zz, zz));
1063ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1078c3ff71bSJunchao Zhang }
1088c3ff71bSJunchao Zhang 
109d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMultTranspose_MPIAIJKokkos(Mat mat, Vec xx, Vec yy)
110d71ae5a4SJacob Faibussowitsch {
1118c3ff71bSJunchao Zhang   Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ *)mat->data;
1128c3ff71bSJunchao Zhang   PetscInt    nt;
1138c3ff71bSJunchao Zhang 
1148c3ff71bSJunchao Zhang   PetscFunctionBegin;
1159566063dSJacob Faibussowitsch   PetscCall(VecGetLocalSize(xx, &nt));
11608401ef6SPierre Jolivet   PetscCheck(nt == mat->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Incompatible partition of mat (%" PetscInt_FMT ") and xx (%" PetscInt_FMT ")", mat->rmap->n, nt);
1179566063dSJacob Faibussowitsch   PetscCall((*mpiaij->B->ops->multtranspose)(mpiaij->B, xx, mpiaij->lvec));
1189566063dSJacob Faibussowitsch   PetscCall((*mpiaij->A->ops->multtranspose)(mpiaij->A, xx, yy));
1199566063dSJacob Faibussowitsch   PetscCall(VecScatterBegin(mpiaij->Mvctx, mpiaij->lvec, yy, ADD_VALUES, SCATTER_REVERSE));
1209566063dSJacob Faibussowitsch   PetscCall(VecScatterEnd(mpiaij->Mvctx, mpiaij->lvec, yy, ADD_VALUES, SCATTER_REVERSE));
1213ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1228c3ff71bSJunchao Zhang }
1238c3ff71bSJunchao Zhang 
124076ba34aSJunchao Zhang /* Merge the "A, B" matrices of mat into a matrix C.  mat's type is MPIAIJKOKKOS. C's type is MATSEQAIJKOKKOS.
125076ba34aSJunchao Zhang    A is put before B. C's size would be A->rmap->n by (A->cmap->n + B->cmap->n).
126076ba34aSJunchao Zhang    C still uses local column ids. Their corresponding global column ids are returned in glob.
127076ba34aSJunchao Zhang */
128d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMPIAIJGetLocalMatMerge_MPIAIJKokkos(Mat mat, MatReuse reuse, IS *glob, Mat *C)
129d71ae5a4SJacob Faibussowitsch {
130076ba34aSJunchao Zhang   Mat             Ad, Ao;
131076ba34aSJunchao Zhang   const PetscInt *cmap;
132076ba34aSJunchao Zhang 
133076ba34aSJunchao Zhang   PetscFunctionBegin;
1349566063dSJacob Faibussowitsch   PetscCall(MatMPIAIJGetSeqAIJ(mat, &Ad, &Ao, &cmap));
1359566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosMergeMats(Ad, Ao, reuse, C));
136076ba34aSJunchao Zhang   if (glob) {
137076ba34aSJunchao Zhang     PetscInt cst, i, dn, on, *gidx;
1389566063dSJacob Faibussowitsch     PetscCall(MatGetLocalSize(Ad, NULL, &dn));
1399566063dSJacob Faibussowitsch     PetscCall(MatGetLocalSize(Ao, NULL, &on));
1409566063dSJacob Faibussowitsch     PetscCall(MatGetOwnershipRangeColumn(mat, &cst, NULL));
1419566063dSJacob Faibussowitsch     PetscCall(PetscMalloc1(dn + on, &gidx));
142076ba34aSJunchao Zhang     for (i = 0; i < dn; i++) gidx[i] = cst + i;
143076ba34aSJunchao Zhang     for (i = 0; i < on; i++) gidx[i + dn] = cmap[i];
1449566063dSJacob Faibussowitsch     PetscCall(ISCreateGeneral(PetscObjectComm((PetscObject)Ad), dn + on, gidx, PETSC_OWN_POINTER, glob));
145076ba34aSJunchao Zhang   }
1463ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
147076ba34aSJunchao Zhang }
148076ba34aSJunchao Zhang 
1490e3ece09SJunchao Zhang /* Structs used in matrix products of type C=AB, C=A^tB and C=B^tAB */
150076ba34aSJunchao Zhang struct MatMatStruct {
1510e3ece09SJunchao Zhang   PetscInt            n, *garray;     // C's garray and its size.
1520e3ece09SJunchao Zhang   KokkosCsrMatrix     Cd, Co;         // C is in split form matrices (all in local column indcies)
1530e3ece09SJunchao Zhang   KokkosCsrMatrix     C1, C2, C3, C4; // intermediate mat products
1540e3ece09SJunchao Zhang   KokkosCsrMatrix     C2_mid, C4_mid; // alias of C2, C4; share their a[], i[], but with different j[] (hence column size)
1550e3ece09SJunchao Zhang   PetscIntKokkosView  E_NzLeft;
1560e3ece09SJunchao Zhang   PetscSF             sf = nullptr; // SF to bcast or reduce matrices E to F
1570e3ece09SJunchao Zhang   MatScalarKokkosView rootBuf, leafBuf;
1580e3ece09SJunchao Zhang   KokkosCsrMatrix     Fd, Fo; // F in split form
1590e3ece09SJunchao Zhang 
1600e3ece09SJunchao Zhang   KernelHandle kh1; // compute C1, add C1+C3 or C1+Fd
1610e3ece09SJunchao Zhang   KernelHandle kh2; // compute C2, add C2+C4 or C2+Fo
1620e3ece09SJunchao Zhang   KernelHandle kh3; // compute C3
1630e3ece09SJunchao Zhang   KernelHandle kh4; // compute C4
1640e3ece09SJunchao Zhang 
165*aaa8cc7dSPierre Jolivet   PetscInt E_TeamSize; // kernel launching parameters in merging E or splitting F
1660e3ece09SJunchao Zhang   PetscInt E_VectorLength;
1670e3ece09SJunchao Zhang   PetscInt E_RowsPerTeam;
1680e3ece09SJunchao Zhang   PetscInt F_TeamSize;
1690e3ece09SJunchao Zhang   PetscInt F_VectorLength;
1700e3ece09SJunchao Zhang   PetscInt F_RowsPerTeam;
171076ba34aSJunchao Zhang 
172d71ae5a4SJacob Faibussowitsch   ~MatMatStruct()
173d71ae5a4SJacob Faibussowitsch   {
1743ba16761SJacob Faibussowitsch     PetscFunctionBegin;
1753ba16761SJacob Faibussowitsch     PetscCallAbort(PETSC_COMM_SELF, PetscSFDestroy(&sf));
1763ba16761SJacob Faibussowitsch     PetscFunctionReturnVoid();
177076ba34aSJunchao Zhang   }
178076ba34aSJunchao Zhang };
179076ba34aSJunchao Zhang 
180076ba34aSJunchao Zhang struct MatMatStruct_AB : public MatMatStruct {
1810e3ece09SJunchao Zhang   PetscIntKokkosView F_NzLeft; // plans to split F (in leafbuf) into Fd, Fo
1820e3ece09SJunchao Zhang   PetscIntKokkosView irootloc; // plans to put E (i.e., Bd, Bo) into rootBuf
1830e3ece09SJunchao Zhang   PetscIntKokkosView rowoffset;
184076ba34aSJunchao Zhang };
185076ba34aSJunchao Zhang 
186076ba34aSJunchao Zhang struct MatMatStruct_AtB : public MatMatStruct {
1870e3ece09SJunchao Zhang   MatColIdxKokkosView Fdjmap; // plans to reduce data in rootBuf to Fd, Fo
1880e3ece09SJunchao Zhang   MatColIdxKokkosView Fdjperm;
1890e3ece09SJunchao Zhang   MatColIdxKokkosView Fojmap;
1900e3ece09SJunchao Zhang   MatColIdxKokkosView Fojperm;
191076ba34aSJunchao Zhang };
192076ba34aSJunchao Zhang 
1939371c9d4SSatish Balay struct MatProductData_MPIAIJKokkos {
1943ba16761SJacob Faibussowitsch   MatMatStruct_AB  *mmAB     = nullptr;
1953ba16761SJacob Faibussowitsch   MatMatStruct_AtB *mmAtB    = nullptr;
1963ba16761SJacob Faibussowitsch   PetscBool         reusesym = PETSC_FALSE;
1970e3ece09SJunchao Zhang   Mat               Z        = nullptr; // store Z=AB in computing BtAB
198076ba34aSJunchao Zhang 
199d71ae5a4SJacob Faibussowitsch   ~MatProductData_MPIAIJKokkos()
200d71ae5a4SJacob Faibussowitsch   {
201076ba34aSJunchao Zhang     delete mmAB;
202076ba34aSJunchao Zhang     delete mmAtB;
2030e3ece09SJunchao Zhang     PetscCallAbort(PETSC_COMM_SELF, MatDestroy(&Z));
204076ba34aSJunchao Zhang   }
205076ba34aSJunchao Zhang };
206076ba34aSJunchao Zhang 
207d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductDataDestroy_MPIAIJKokkos(void *data)
208d71ae5a4SJacob Faibussowitsch {
209076ba34aSJunchao Zhang   PetscFunctionBegin;
2109566063dSJacob Faibussowitsch   PetscCallCXX(delete static_cast<MatProductData_MPIAIJKokkos *>(data));
2113ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
212076ba34aSJunchao Zhang }
213076ba34aSJunchao Zhang 
214076ba34aSJunchao Zhang /* MatSetMPIAIJKokkosWithSplitSeqAIJKokkosMatrices - Set the diag and offdiag matrices of a MATMPIAIJKOKKOS matrix.
215076ba34aSJunchao Zhang    It is similar to MatCreateMPIAIJWithSplitArrays.
216076ba34aSJunchao Zhang 
217076ba34aSJunchao Zhang   Input Parameters:
218076ba34aSJunchao Zhang +  mat   - the MATMPIAIJKOKKOS matrix, which should have its type and layout set, but should not have its diag, offdiag matrices set
219076ba34aSJunchao Zhang .  A     - the diag matrix using local col ids
220076ba34aSJunchao Zhang -  B     - the offdiag matrix using global col ids
221076ba34aSJunchao Zhang 
2222fe279fdSBarry Smith   Output Parameter:
223076ba34aSJunchao Zhang .  mat   - the updated MATMPIAIJKOKKOS matrix
224076ba34aSJunchao Zhang */
2250e3ece09SJunchao Zhang static PetscErrorCode MatSetMPIAIJKokkosWithSplitSeqAIJKokkosMatrices(Mat mat, Mat A, Mat B, PetscInt *garray)
226d71ae5a4SJacob Faibussowitsch {
227076ba34aSJunchao Zhang   Mat_MPIAIJ *mpiaij = static_cast<Mat_MPIAIJ *>(mat->data);
228076ba34aSJunchao Zhang   PetscInt    m, n, M, N, Am, An, Bm, Bn;
229076ba34aSJunchao Zhang 
230076ba34aSJunchao Zhang   PetscFunctionBegin;
2319566063dSJacob Faibussowitsch   PetscCall(MatGetSize(mat, &M, &N));
2329566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(mat, &m, &n));
2339566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(A, &Am, &An));
2349566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(B, &Bm, &Bn));
235076ba34aSJunchao Zhang 
236aed4548fSBarry Smith   PetscCheck(m == Am && m == Bm, PETSC_COMM_SELF, PETSC_ERR_PLIB, "local number of rows do not match");
23708401ef6SPierre Jolivet   PetscCheck(n == An, PETSC_COMM_SELF, PETSC_ERR_PLIB, "local number of columns do not match");
2380e3ece09SJunchao Zhang   // PetscCheck(N == Bn, PETSC_COMM_SELF, PETSC_ERR_PLIB, "global number of columns do not match");
23908401ef6SPierre Jolivet   PetscCheck(!mpiaij->A && !mpiaij->B, PETSC_COMM_SELF, PETSC_ERR_PLIB, "A, B of the MPIAIJ matrix are not empty");
240076ba34aSJunchao Zhang   mpiaij->A      = A;
241076ba34aSJunchao Zhang   mpiaij->B      = B;
2420e3ece09SJunchao Zhang   mpiaij->garray = garray;
243076ba34aSJunchao Zhang 
244076ba34aSJunchao Zhang   mat->preallocated     = PETSC_TRUE;
245076ba34aSJunchao Zhang   mat->nooffprocentries = PETSC_TRUE; /* See MatAssemblyBegin_MPIAIJ. In effect, making MatAssemblyBegin a nop */
246076ba34aSJunchao Zhang 
2479566063dSJacob Faibussowitsch   PetscCall(MatSetOption(mat, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE));
2489566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(mat, MAT_FINAL_ASSEMBLY));
249076ba34aSJunchao Zhang   /* MatAssemblyEnd is critical here. It sets mat->offloadmask according to A and B's, and
250076ba34aSJunchao Zhang     also gets mpiaij->B compacted, with its col ids and size reduced
251076ba34aSJunchao Zhang   */
2529566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(mat, MAT_FINAL_ASSEMBLY));
2539566063dSJacob Faibussowitsch   PetscCall(MatSetOption(mat, MAT_NO_OFF_PROC_ENTRIES, PETSC_FALSE));
2549566063dSJacob Faibussowitsch   PetscCall(MatSetOption(mat, MAT_NEW_NONZERO_LOCATION_ERR, PETSC_TRUE));
2553ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
256076ba34aSJunchao Zhang }
257076ba34aSJunchao Zhang 
2580e3ece09SJunchao Zhang // Adapted from Kokkos-Kernels spmv_launch_parameters(), to get parameters in Kokkos nested loops which we used to merge or
2590e3ece09SJunchao Zhang // split csr matrices. The rule is to have "vector_length * team_size" be around 256 on GPUs (e.g., for a CUDA thread block)
2600e3ece09SJunchao Zhang template <class ExecutionSpace>
2610e3ece09SJunchao Zhang static PetscErrorCode MatMergeGetLaunchParameters(PetscInt numRows, PetscInt nnz, PetscInt rows_per_thread, PetscInt &team_size, PetscInt &vector_length, PetscInt &rows_per_team)
262d71ae5a4SJacob Faibussowitsch {
2630e3ece09SJunchao Zhang   Kokkos::TeamPolicy<ExecutionSpace> teamPolicy(128, Kokkos::AUTO);
264076ba34aSJunchao Zhang 
265076ba34aSJunchao Zhang   PetscFunctionBegin;
2660e3ece09SJunchao Zhang   PetscInt nnz_per_row = numRows ? (nnz / numRows) : 0; // we might meet empty matrices
267076ba34aSJunchao Zhang 
2680e3ece09SJunchao Zhang   if (nnz_per_row < 1) nnz_per_row = 1;
269076ba34aSJunchao Zhang 
2700e3ece09SJunchao Zhang   int max_vector_length = teamPolicy.vector_length_max();
271076ba34aSJunchao Zhang 
2720e3ece09SJunchao Zhang   if (vector_length < 1) {
2730e3ece09SJunchao Zhang     vector_length = 1;
2740e3ece09SJunchao Zhang     while (vector_length < max_vector_length && vector_length * 6 < nnz_per_row) vector_length *= 2;
275076ba34aSJunchao Zhang   }
276076ba34aSJunchao Zhang 
2770e3ece09SJunchao Zhang   // Determine rows per thread
2780e3ece09SJunchao Zhang   if (rows_per_thread < 1) {
2790e3ece09SJunchao Zhang     if (KokkosKernels::Impl::kk_is_gpu_exec_space<ExecutionSpace>()) rows_per_thread = 1;
2800e3ece09SJunchao Zhang     else {
2810e3ece09SJunchao Zhang       if (nnz_per_row < 20 && nnz > 5000000) {
2820e3ece09SJunchao Zhang         rows_per_thread = 256;
2830e3ece09SJunchao Zhang       } else rows_per_thread = 64;
284076ba34aSJunchao Zhang     }
285076ba34aSJunchao Zhang   }
286076ba34aSJunchao Zhang 
2870e3ece09SJunchao Zhang   if (team_size < 1) {
2880e3ece09SJunchao Zhang     if (KokkosKernels::Impl::kk_is_gpu_exec_space<ExecutionSpace>()) {
2890e3ece09SJunchao Zhang       team_size = 256 / vector_length;
290076ba34aSJunchao Zhang     } else {
2910e3ece09SJunchao Zhang       team_size = 1;
2920e3ece09SJunchao Zhang     }
293076ba34aSJunchao Zhang   }
294076ba34aSJunchao Zhang 
2950e3ece09SJunchao Zhang   rows_per_team = rows_per_thread * team_size;
296076ba34aSJunchao Zhang 
2970e3ece09SJunchao Zhang   if (rows_per_team < 0) {
2980e3ece09SJunchao Zhang     PetscInt nnz_per_team = 4096;
2990e3ece09SJunchao Zhang     PetscInt conc         = ExecutionSpace().concurrency();
3000e3ece09SJunchao Zhang     while ((conc * nnz_per_team * 4 > nnz) && (nnz_per_team > 256)) nnz_per_team /= 2;
3010e3ece09SJunchao Zhang     rows_per_team = (nnz_per_team + nnz_per_row - 1) / nnz_per_row;
3020e3ece09SJunchao Zhang   }
3033ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
304076ba34aSJunchao Zhang }
305076ba34aSJunchao Zhang 
3060e3ece09SJunchao Zhang /*
3070e3ece09SJunchao Zhang   Reduce two sets of global indices into local ones
308076ba34aSJunchao Zhang 
309076ba34aSJunchao Zhang   Input Parameters:
3100e3ece09SJunchao Zhang +  n1          - size of garray1[], the first set
3110e3ece09SJunchao Zhang .  garray1[n1] - a sorted global index array (without duplicates)
3120e3ece09SJunchao Zhang .  m           - size of indices[], the second set
3130e3ece09SJunchao Zhang -  indices[m]  - a unsorted global index array (might have duplicates), which will be updated on output into local ones
314076ba34aSJunchao Zhang 
315076ba34aSJunchao Zhang   Output Parameters:
3160e3ece09SJunchao Zhang +  n2          - size of garray2[], the merged set, which combines garray1[] and indices[]
3170e3ece09SJunchao Zhang .  garray2[n2] - allocated by callee using PetscMalloc1(). Contains sorted unique global indices (without duplicates). Caller needs to free it.
3180e3ece09SJunchao Zhang .  map[n1]     - allocated by caller. It gives garray1[i] = garray2[map[i]]
3190e3ece09SJunchao Zhang -  indices[m]  - on output, global indices in this array are rewritten with local ones, i.e, indices_input[i] = garray2[indices_output[i]]
320076ba34aSJunchao Zhang 
3210e3ece09SJunchao Zhang    Example, say
3220e3ece09SJunchao Zhang     n1         = 5
3230e3ece09SJunchao Zhang     garray1[5] = {1, 4, 7, 8, 10}
3240e3ece09SJunchao Zhang     m          = 4
3250e3ece09SJunchao Zhang     indices[4] = {2, 4, 8, 9}
32611a5261eSBarry Smith 
3270e3ece09SJunchao Zhang    Combining them together, we have 7 global indices in garray2[]
3280e3ece09SJunchao Zhang     n2         = 7
3290e3ece09SJunchao Zhang     garray2[7] = {1, 2, 4, 7, 8, 9, 10}
3300e3ece09SJunchao Zhang 
3310e3ece09SJunchao Zhang    And we have map[] to connect "garray1[i] = garray2[map[i]], i=[0,n1)"
3320e3ece09SJunchao Zhang     map[5] = {0, 2, 3, 4, 6}
3330e3ece09SJunchao Zhang 
3340e3ece09SJunchao Zhang    On output, indices[] is updated with local indices
3350e3ece09SJunchao Zhang     indices[4] = {1, 2, 4, 5}
336076ba34aSJunchao Zhang */
3370e3ece09SJunchao Zhang static PetscErrorCode ReduceTwoSetsOfGlobalIndices(PetscInt n1, const PetscInt *garray1, PetscInt m, PetscInt *indices, PetscInt *n2_, PetscInt **garray2_, PetscInt *map)
338d71ae5a4SJacob Faibussowitsch {
3390e3ece09SJunchao Zhang   PetscHMapI    g2l = nullptr;
3400e3ece09SJunchao Zhang   PetscHashIter iter;
3410e3ece09SJunchao Zhang   PetscInt      tot, key, val; // total unique global indices. key is global id; val is local id
3420e3ece09SJunchao Zhang   PetscInt      n2, *garray2;
343076ba34aSJunchao Zhang 
344076ba34aSJunchao Zhang   PetscFunctionBegin;
3450e3ece09SJunchao Zhang   tot = 0;
3460e3ece09SJunchao Zhang   PetscCall(PetscHMapICreateWithSize(n1, &g2l));
3470e3ece09SJunchao Zhang   for (PetscInt i = 0; i < m; i++) {                                // insert those in indices[]
3480e3ece09SJunchao Zhang     PetscCall(PetscHMapIGetWithDefault(g2l, indices[i], -1, &val)); // if not exist, val is set with -1
3490e3ece09SJunchao Zhang     if (val < 0) PetscCall(PetscHMapISet(g2l, indices[i], tot++));  // val < 0 means gid is not in the hash table yet
350076ba34aSJunchao Zhang   }
351076ba34aSJunchao Zhang 
3520e3ece09SJunchao Zhang   for (PetscInt i = 0; i < n1; i++) { // insert those in garray1[]
3530e3ece09SJunchao Zhang     PetscCall(PetscHMapIGetWithDefault(g2l, garray1[i], -1, &val));
3540e3ece09SJunchao Zhang     if (val < 0) PetscCall(PetscHMapISet(g2l, garray1[i], tot++));
355076ba34aSJunchao Zhang   }
356076ba34aSJunchao Zhang 
3570e3ece09SJunchao Zhang   // Pull out (unique) globals in the hash table and put them in garray2[]
3580e3ece09SJunchao Zhang   n2 = tot;
3590e3ece09SJunchao Zhang   PetscCall(PetscMalloc1(n2, &garray2));
3600e3ece09SJunchao Zhang   tot = 0;
3610e3ece09SJunchao Zhang   PetscHashIterBegin(g2l, iter);
3620e3ece09SJunchao Zhang   while (!PetscHashIterAtEnd(g2l, iter)) {
3630e3ece09SJunchao Zhang     PetscHashIterGetKey(g2l, iter, key);
3640e3ece09SJunchao Zhang     PetscHashIterNext(g2l, iter);
3650e3ece09SJunchao Zhang     garray2[tot++] = key;
366076ba34aSJunchao Zhang   }
367076ba34aSJunchao Zhang 
3680e3ece09SJunchao Zhang   // Sort garray2[] and then map them to local indices starting from 0
3690e3ece09SJunchao Zhang   PetscCall(PetscSortInt(n2, garray2));
3700e3ece09SJunchao Zhang   PetscCall(PetscHMapIClear(g2l));
3710e3ece09SJunchao Zhang   for (PetscInt i = 0; i < tot; i++) PetscCall(PetscHMapISet(g2l, garray2[i], i)); // i is the local id
372f0e6e2d1SJunchao Zhang 
3730e3ece09SJunchao Zhang   // Rewrite indices[] with local indices
374f0e6e2d1SJunchao Zhang   for (PetscInt i = 0; i < m; i++) {
3750e3ece09SJunchao Zhang     PetscCall(PetscHMapIGetWithDefault(g2l, indices[i], -1, &val));
3760e3ece09SJunchao Zhang     PetscAssert(val >= 0, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Met a negative local column index");
3770e3ece09SJunchao Zhang     indices[i] = val;
3780e3ece09SJunchao Zhang   }
3790e3ece09SJunchao Zhang   // Record the map that maps garray1[i] to garray2[map[i]]
3800e3ece09SJunchao Zhang   for (PetscInt i = 0; i < n1; i++) PetscCall(PetscHMapIGetWithDefault(g2l, garray1[i], -1, &map[i]));
3810e3ece09SJunchao Zhang   PetscCall(PetscHMapIDestroy(&g2l));
3820e3ece09SJunchao Zhang   *n2_      = n2;
3830e3ece09SJunchao Zhang   *garray2_ = garray2;
3840e3ece09SJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
3850e3ece09SJunchao Zhang }
386f0e6e2d1SJunchao Zhang 
3870e3ece09SJunchao Zhang /*
3880e3ece09SJunchao Zhang   MatMPIAIJKokkosReduce - Reduce rows of a MPIAIJKOKKOS matrix (E, in split form) to produce another matrix (F, also in split form, stored in mm)
3890e3ece09SJunchao Zhang 
3900e3ece09SJunchao Zhang   It is the reverse of MatMPIAIJKokkosBcast() in some sense, but with a different signature since we do not really need a fully populated MPIAIJKOKKOS E.
3910e3ece09SJunchao Zhang 
3920e3ece09SJunchao Zhang   Think each row of E as a leaf, then the given ownerSF specifies roots for the leaves. Roots may connect to multiple leaves.
3930e3ece09SJunchao Zhang   In this routine, we sparse-merge leaves (rows) at their roots to form potentially longer rows in F. F's number of rows will be nroots of ownerSF.
3940e3ece09SJunchao Zhang 
3950e3ece09SJunchao Zhang   Input Parameters:
3960e3ece09SJunchao Zhang +  comm       - MPI communicator of E
3970e3ece09SJunchao Zhang .  A          - diag block of E, using local column indices
3980e3ece09SJunchao Zhang .  B          - off-diag block of E, using local column indices
3990e3ece09SJunchao Zhang .  cstart      - (global) start column of Ed
4000e3ece09SJunchao Zhang .  cend        - (global) end column + 1 of Ed.  In other words, E's column ownership is in range of [cstart, cend)
4010e3ece09SJunchao Zhang .  garray1[n1] - global column indices of Eo. Here n1 is Eo's column size.
4020e3ece09SJunchao Zhang .  ownerSF     - the SF specifies ownership (root) of rows in E
4030e3ece09SJunchao Zhang .  reuse       - either MAT_INITIAL_MATRIX or MAT_REUSE_MATRIX
4040e3ece09SJunchao Zhang -  mm          - to stash intermediate data structures for reuse
4050e3ece09SJunchao Zhang 
4060e3ece09SJunchao Zhang   Output Parameters:
4070e3ece09SJunchao Zhang +  map[n1]  - allocated by caller. It maps garray1[] to garray2[]. See more at ReduceTwoSetsOfGlobalIndices().
4080e3ece09SJunchao Zhang -  mm       - contains various info, such as garray2[], F (Fd, Fo) etc.
4090e3ece09SJunchao Zhang 
4100e3ece09SJunchao Zhang   Notes:
4110e3ece09SJunchao Zhang   When reuse = MAT_REUSE_MATRIX, cstart, cend, garray1, ownerSF, map are not significant.
4120e3ece09SJunchao Zhang 
4130e3ece09SJunchao Zhang  */
4140e3ece09SJunchao Zhang static PetscErrorCode MatMPIAIJKokkosReduceBegin(MPI_Comm comm, KokkosCsrMatrix A, KokkosCsrMatrix B, PetscInt cstart, PetscInt cend, const PetscInt *garray1, PetscSF ownerSF, MatReuse reuse, PetscInt *map, MatMatStruct_AtB *mm)
4150e3ece09SJunchao Zhang {
4160e3ece09SJunchao Zhang   PetscFunctionBegin;
4170e3ece09SJunchao Zhang   if (reuse == MAT_INITIAL_MATRIX) {
4180e3ece09SJunchao Zhang     PetscInt Em = A.numRows(), Fm;
4190e3ece09SJunchao Zhang     PetscInt n1 = B.numCols();
4200e3ece09SJunchao Zhang 
4210e3ece09SJunchao Zhang     PetscCall(PetscSFGetGraph(ownerSF, &Fm, NULL, NULL, NULL)); // Fm = #rows of F = nroots of ownerSF
4220e3ece09SJunchao Zhang 
4230e3ece09SJunchao Zhang     // Do the analysis on host
4240e3ece09SJunchao Zhang     auto                 Ai_h = Kokkos::create_mirror_view_and_copy(Kokkos::HostSpace(), A.graph.row_map);
4250e3ece09SJunchao Zhang     auto                 Aj_h = Kokkos::create_mirror_view_and_copy(Kokkos::HostSpace(), A.graph.entries);
4260e3ece09SJunchao Zhang     auto                 Bi_h = Kokkos::create_mirror_view_and_copy(Kokkos::HostSpace(), B.graph.row_map);
4270e3ece09SJunchao Zhang     auto                 Bj_h = Kokkos::create_mirror_view_and_copy(Kokkos::HostSpace(), B.graph.entries);
4280e3ece09SJunchao Zhang     const MatRowMapType *Ai = Ai_h.data(), *Bi = Bi_h.data();
4290e3ece09SJunchao Zhang     const MatColIdxType *Aj = Aj_h.data(), *Bj = Bj_h.data();
4300e3ece09SJunchao Zhang 
4310e3ece09SJunchao Zhang     // Count how many nonzeros of each row in E are in the left of the diag block [cstart,cend)
4320e3ece09SJunchao Zhang     PetscIntKokkosViewHost E_NzLeft_h("E_NzLeft_h", Em), E_RowLen_h("E_RowLen_h", Em);
4330e3ece09SJunchao Zhang     PetscInt              *E_NzLeft = E_NzLeft_h.data(), *E_RowLen = E_RowLen_h.data();
4340e3ece09SJunchao Zhang     for (PetscInt i = 0; i < Em; i++) {
4350e3ece09SJunchao Zhang       const PetscInt *first, *last, *it;
4360e3ece09SJunchao Zhang       PetscInt        count, step;
4370e3ece09SJunchao Zhang       // std::lower_bound(first,last,cstart), but need to use global column indices
4380e3ece09SJunchao Zhang       first = Bj + Bi[i];
4390e3ece09SJunchao Zhang       last  = Bj + Bi[i + 1];
440f0e6e2d1SJunchao Zhang       count = last - first;
441f0e6e2d1SJunchao Zhang       while (count > 0) {
442f0e6e2d1SJunchao Zhang         it   = first;
443f0e6e2d1SJunchao Zhang         step = count / 2;
444f0e6e2d1SJunchao Zhang         it += step;
4450e3ece09SJunchao Zhang         if (garray1[*it] < cstart) { // map local to global
446f0e6e2d1SJunchao Zhang           first = ++it;
447f0e6e2d1SJunchao Zhang           count -= step + 1;
448f0e6e2d1SJunchao Zhang         } else count = step;
449f0e6e2d1SJunchao Zhang       }
4500e3ece09SJunchao Zhang       E_NzLeft[i] = first - (Bj + Bi[i]);
4510e3ece09SJunchao Zhang       E_RowLen[i] = (Ai[i + 1] - Ai[i]) + (Bi[i + 1] - Bi[i]);
452f0e6e2d1SJunchao Zhang     }
453f0e6e2d1SJunchao Zhang 
4540e3ece09SJunchao Zhang     // Get length of rows (i.e., sizes of leaves) that contribute to my roots
4550e3ece09SJunchao Zhang     const PetscMPIInt *iranks, *ranks;
4560e3ece09SJunchao Zhang     const PetscInt    *ioffset, *irootloc, *roffset, *rmine;
4570e3ece09SJunchao Zhang     PetscInt           niranks, nranks;
4580e3ece09SJunchao Zhang     MPI_Request       *reqs;
4590e3ece09SJunchao Zhang     PetscMPIInt        tag;
4600e3ece09SJunchao Zhang     PetscSF            reduceSF;
4610e3ece09SJunchao Zhang     PetscInt          *sdisp, *rdisp;
462f0e6e2d1SJunchao Zhang 
4630e3ece09SJunchao Zhang     PetscCall(PetscCommGetNewTag(comm, &tag));
4640e3ece09SJunchao Zhang     PetscCall(PetscSFGetLeafRanks(ownerSF, &niranks, &iranks, &ioffset, &irootloc));  // get leaf ranks connecting to roots on this process (I'll recv from them)
4650e3ece09SJunchao Zhang     PetscCall(PetscSFGetRootRanks(ownerSF, &nranks, &ranks, &roffset, &rmine, NULL)); // get root ranks this process connects (I'll send to them)
466f0e6e2d1SJunchao Zhang 
4670e3ece09SJunchao Zhang     // Find out length of each row I will receive. Even for the same row index, when they are from
4680e3ece09SJunchao Zhang     // different senders, they might have different lengths (and sparsity patterns)
4690e3ece09SJunchao Zhang     PetscInt  sendRowCnt = roffset[nranks], recvRowCnt = ioffset[niranks];
4700e3ece09SJunchao Zhang     PetscInt *sendRowLen, *recvRowLen; // lengths of rows of I need to send/recv per process
471f0e6e2d1SJunchao Zhang 
4720e3ece09SJunchao Zhang     PetscCall(PetscMalloc5(sendRowCnt, &sendRowLen, recvRowCnt + 1, &recvRowLen, nranks, &sdisp, niranks + 1, &rdisp, nranks + niranks, &reqs));
4730e3ece09SJunchao Zhang 
4740e3ece09SJunchao Zhang     for (PetscInt i = 0; i < sendRowCnt; i++) sendRowLen[i] = E_RowLen[rmine[i]];
4750e3ece09SJunchao Zhang     recvRowLen[0] = 0; // since we will make it in CSR format later
4760e3ece09SJunchao Zhang     recvRowLen++;      // advance the pointer now
4770e3ece09SJunchao Zhang     for (PetscInt i = 0; i < niranks; i++) { MPI_Irecv(&recvRowLen[ioffset[i]], ioffset[i + 1] - ioffset[i], MPIU_INT, iranks[i], tag, comm, &reqs[nranks + i]); }
4780e3ece09SJunchao Zhang     for (PetscInt i = 0; i < nranks; i++) { MPI_Isend(&sendRowLen[roffset[i]], roffset[i + 1] - roffset[i], MPIU_INT, ranks[i], tag, comm, &reqs[i]); }
4790e3ece09SJunchao Zhang     PetscCallMPI(MPI_Waitall(nranks + niranks, reqs, MPI_STATUSES_IGNORE));
4800e3ece09SJunchao Zhang 
4810e3ece09SJunchao Zhang     // Build the real PetscSF for reducing E rows (buffer to buffer)
4820e3ece09SJunchao Zhang     rdisp[0] = 0;
4830e3ece09SJunchao Zhang     for (PetscInt i = 0; i < niranks; i++) {
4840e3ece09SJunchao Zhang       rdisp[i + 1] = rdisp[i];
4850e3ece09SJunchao Zhang       for (PetscInt j = ioffset[i]; j < ioffset[i + 1]; j++) { rdisp[i + 1] += recvRowLen[j]; }
4860e3ece09SJunchao Zhang     }
4870e3ece09SJunchao Zhang     recvRowLen--; // put it back into csr format
4880e3ece09SJunchao Zhang     for (PetscInt i = 0; i < recvRowCnt; i++) recvRowLen[i + 1] += recvRowLen[i];
4890e3ece09SJunchao Zhang 
4900e3ece09SJunchao Zhang     for (PetscInt i = 0; i < nranks; i++) { MPI_Irecv(&sdisp[i], 1, MPIU_INT, ranks[i], tag, comm, &reqs[i]); }
4910e3ece09SJunchao Zhang     for (PetscInt i = 0; i < niranks; i++) { MPI_Isend(&rdisp[i], 1, MPIU_INT, iranks[i], tag, comm, &reqs[nranks + i]); }
4920e3ece09SJunchao Zhang     PetscCallMPI(MPI_Waitall(nranks + niranks, reqs, MPI_STATUSES_IGNORE));
4930e3ece09SJunchao Zhang 
4940e3ece09SJunchao Zhang     PetscInt     nleaves = 0, Enz = 0;    // leaves are nonzeros I will send
4950e3ece09SJunchao Zhang     PetscInt     nroots = rdisp[niranks]; // roots are nonzeros I will recv
4960e3ece09SJunchao Zhang     PetscSFNode *iremote;
4970e3ece09SJunchao Zhang 
4980e3ece09SJunchao Zhang     for (PetscInt i = 0; i < Em; i++) Enz += E_RowLen[i];
4990e3ece09SJunchao Zhang     PetscAssert(A.nnz() + B.nnz() == Enz, comm, PETSC_ERR_PLIB, "Enz should be equal to sum of nnz of A and B");
5000e3ece09SJunchao Zhang     PetscCallMPI(PetscMalloc1(Enz, &iremote)); // no free, since we give ownership to reduceSF
5010e3ece09SJunchao Zhang 
5020e3ece09SJunchao Zhang     for (PetscInt i = 0; i < nranks; i++) {
5030e3ece09SJunchao Zhang       PetscInt count = 0;
5040e3ece09SJunchao Zhang       for (PetscInt j = roffset[i]; j < roffset[i + 1]; j++) count += E_RowLen[rmine[j]];
5050e3ece09SJunchao Zhang       for (PetscInt j = 0; j < count; j++) {
5060e3ece09SJunchao Zhang         iremote[nleaves + j].rank  = ranks[i];
5070e3ece09SJunchao Zhang         iremote[nleaves + j].index = sdisp[i] + j;
5080e3ece09SJunchao Zhang       }
5090e3ece09SJunchao Zhang       nleaves += count;
5100e3ece09SJunchao Zhang     }
5110e3ece09SJunchao Zhang     PetscCheck(nleaves == Enz, comm, PETSC_ERR_PLIB, "nleaves should be equal to Enz");
5120e3ece09SJunchao Zhang 
5130e3ece09SJunchao Zhang     PetscCall(PetscSFCreate(comm, &reduceSF));
5140e3ece09SJunchao Zhang     PetscCall(PetscSFSetGraph(reduceSF, nroots, nleaves, NULL, PETSC_OWN_POINTER, iremote, PETSC_OWN_POINTER));
5150e3ece09SJunchao Zhang 
5160e3ece09SJunchao Zhang     // Copy (global) column indices of the needed rows in E to sendCol[], and then PetscSFReduce to recvCol[]
5170e3ece09SJunchao Zhang     PetscInt *sendCol, *recvCol;
5180e3ece09SJunchao Zhang     PetscCall(PetscMalloc2(nleaves, &sendCol, nroots, &recvCol));
5190e3ece09SJunchao Zhang     for (PetscInt k = 0; k < roffset[nranks]; k++) {
5200e3ece09SJunchao Zhang       PetscInt  i      = rmine[k]; // row to be copied
5210e3ece09SJunchao Zhang       PetscInt *buf    = &sendCol[Ai[i] + Bi[i]];
5220e3ece09SJunchao Zhang       PetscInt  nzLeft = E_NzLeft[i];
5230e3ece09SJunchao Zhang       PetscInt  alen = Ai[i + 1] - Ai[i], blen = Bi[i + 1] - Bi[i];
5240e3ece09SJunchao Zhang       for (PetscInt j = 0; j < alen + blen; j++) {
5250e3ece09SJunchao Zhang         if (j < nzLeft) {
5260e3ece09SJunchao Zhang           buf[j] = garray1[Bj[Bi[i] + j]]; // left B, in global
5270e3ece09SJunchao Zhang         } else if (j < nzLeft + alen) {
5280e3ece09SJunchao Zhang           buf[j] = Aj[Ai[i] + j - nzLeft] + cstart; // diag A, also in global
5290e3ece09SJunchao Zhang         } else {
5300e3ece09SJunchao Zhang           buf[j] = garray1[Bj[Bi[i] + j - alen]]; // right B, in global
5310e3ece09SJunchao Zhang         }
5320e3ece09SJunchao Zhang       }
5330e3ece09SJunchao Zhang     }
5340e3ece09SJunchao Zhang     PetscCall(PetscSFReduceWithMemTypeBegin(reduceSF, MPIU_INT, PETSC_MEMTYPE_HOST, sendCol, PETSC_MEMTYPE_HOST, recvCol, MPI_REPLACE));
5350e3ece09SJunchao Zhang     PetscCall(PetscSFReduceEnd(reduceSF, MPIU_INT, sendCol, recvCol, MPI_REPLACE));
5360e3ece09SJunchao Zhang 
5370e3ece09SJunchao Zhang     // With recvCol[], we do a series of analysis to get i, j of Fd, Fo, and build plans to reduce nonzeros in recv buffers to Fd and Fo
5380e3ece09SJunchao Zhang     PetscInt *recvRowPerm, *recvColSorted;
5390e3ece09SJunchao Zhang     PetscInt *recvNzPerm, *recvNzPermSorted;
5400e3ece09SJunchao Zhang     PetscCall(PetscMalloc4(recvRowCnt, &recvRowPerm, nroots, &recvColSorted, nroots, &recvNzPerm, nroots, &recvNzPermSorted));
5410e3ece09SJunchao Zhang 
5420e3ece09SJunchao Zhang     for (PetscInt i = 0; i < nroots; i++) recvNzPerm[i] = i;                   // numbering all received nonzeros
5430e3ece09SJunchao Zhang     for (PetscInt i = 0; i < recvRowCnt; i++) recvRowPerm[i] = i;              // put up a permutation array, so that after sorting we know where to get a row in recvCol[]
5440e3ece09SJunchao Zhang     PetscCall(PetscSortIntWithPermutation(recvRowCnt, irootloc, recvRowPerm)); // irootloc[] (owned by ownerSF) won't be changed
5450e3ece09SJunchao Zhang 
5460e3ece09SJunchao Zhang     // i[] array, nz are always easiest to compute
5470e3ece09SJunchao Zhang     MatRowMapKokkosViewHost Fdi_h("Fdi_h", Fm + 1), Foi_h("Foi_h", Fm + 1);
5480e3ece09SJunchao Zhang     MatRowMapType          *Fdi, *Foi;
5490e3ece09SJunchao Zhang     PetscInt                FnzDups = 0, Fdnz = 0, FdnzDups = 0, Fonz = 0, FonzDups = 0; // nz (with or without dups) in F, Fd, Fo
5500e3ece09SJunchao Zhang     PetscInt                iter;
5510e3ece09SJunchao Zhang 
5520e3ece09SJunchao Zhang     Kokkos::deep_copy(Fdi_h, 0); // zero, as we will do 'val++' on them
5530e3ece09SJunchao Zhang     Kokkos::deep_copy(Foi_h, 0);
5540e3ece09SJunchao Zhang     Fdi  = Fdi_h.data() + 1; // +1 for easy indexing in code below
5550e3ece09SJunchao Zhang     Foi  = Foi_h.data() + 1;
5560e3ece09SJunchao Zhang     iter = 0;
5570e3ece09SJunchao Zhang     while (iter < recvRowCnt) { // iter over received rows
5580e3ece09SJunchao Zhang       PetscInt curRowIdx = irootloc[recvRowPerm[iter]];
5590e3ece09SJunchao Zhang       PetscInt dupRows   = 1; // current row has this many contributing rows (of various sparsity patterns)
5600e3ece09SJunchao Zhang 
5610e3ece09SJunchao Zhang       while (iter + dupRows < recvRowCnt && irootloc[recvRowPerm[iter + dupRows]] == curRowIdx) dupRows++;
5620e3ece09SJunchao Zhang 
5630e3ece09SJunchao Zhang       // Copy column indices (and their permutation) of these rows into recvColSorted & recvNzPermSorted
5640e3ece09SJunchao Zhang       PetscInt  nz    = 0; // nz (with dups) in the current row
5650e3ece09SJunchao Zhang       PetscInt *jbuf  = recvColSorted + FnzDups;
5660e3ece09SJunchao Zhang       PetscInt *pbuf  = recvNzPermSorted + FnzDups;
5670e3ece09SJunchao Zhang       PetscInt *jbuf2 = jbuf; // temp pointers
5680e3ece09SJunchao Zhang       PetscInt *pbuf2 = pbuf;
5690e3ece09SJunchao Zhang       for (PetscInt d = 0; d < dupRows; d++) {
5700e3ece09SJunchao Zhang         PetscInt i   = recvRowPerm[iter + d];
5710e3ece09SJunchao Zhang         PetscInt len = recvRowLen[i + 1] - recvRowLen[i];
5720e3ece09SJunchao Zhang         PetscCall(PetscArraycpy(jbuf2, &recvCol[recvRowLen[i]], len));
5730e3ece09SJunchao Zhang         PetscCall(PetscArraycpy(pbuf2, &recvNzPerm[recvRowLen[i]], len));
5740e3ece09SJunchao Zhang         jbuf2 += len;
5750e3ece09SJunchao Zhang         pbuf2 += len;
5760e3ece09SJunchao Zhang         nz += len;
5770e3ece09SJunchao Zhang       }
5780e3ece09SJunchao Zhang       PetscCall(PetscIntSortSemiOrderedWithArray(nz, jbuf, pbuf)); // It could be improved with k-way merge sort, since the rows are already sorted
5790e3ece09SJunchao Zhang 
5800e3ece09SJunchao Zhang       // Scan column indices (in jbuf[0,nz), might have dups) of this row, and see how many go to Fd and how many go to Fo
5810e3ece09SJunchao Zhang       PetscInt cur = 0;
5820e3ece09SJunchao Zhang       while (cur < nz) {
5830e3ece09SJunchao Zhang         PetscInt curColIdx = jbuf[cur];
5840e3ece09SJunchao Zhang         PetscInt dups      = 1;
5850e3ece09SJunchao Zhang 
5860e3ece09SJunchao Zhang         while (cur + dups < nz && jbuf[cur + dups] == curColIdx) dups++;
5870e3ece09SJunchao Zhang         if (curColIdx >= cstart && curColIdx < cend) {
5880e3ece09SJunchao Zhang           Fdi[curRowIdx]++;
5890e3ece09SJunchao Zhang           FdnzDups += dups;
5900e3ece09SJunchao Zhang         } else {
5910e3ece09SJunchao Zhang           Foi[curRowIdx]++;
5920e3ece09SJunchao Zhang           FonzDups += dups;
5930e3ece09SJunchao Zhang         }
5940e3ece09SJunchao Zhang         cur += dups;
5950e3ece09SJunchao Zhang       }
5960e3ece09SJunchao Zhang 
5970e3ece09SJunchao Zhang       FnzDups += nz;
5980e3ece09SJunchao Zhang       iter += dupRows; // Move to next unique row
5990e3ece09SJunchao Zhang     }
6000e3ece09SJunchao Zhang 
6010e3ece09SJunchao Zhang     Fdi = Fdi_h.data(); // restore Fdi, Foi and make them CSR
6020e3ece09SJunchao Zhang     Foi = Foi_h.data();
6030e3ece09SJunchao Zhang     for (PetscInt i = 0; i < Fm; i++) {
6040e3ece09SJunchao Zhang       Fdi[i + 1] += Fdi[i];
6050e3ece09SJunchao Zhang       Foi[i + 1] += Foi[i];
6060e3ece09SJunchao Zhang     }
6070e3ece09SJunchao Zhang     Fdnz = Fdi[Fm];
6080e3ece09SJunchao Zhang     Fonz = Foi[Fm];
6090e3ece09SJunchao Zhang     PetscCall(PetscFree2(sendCol, recvCol));
6100e3ece09SJunchao Zhang 
6110e3ece09SJunchao Zhang     // Allocate j, jmap, jperm for Fd and Fo
6120e3ece09SJunchao Zhang     MatColIdxKokkosViewHost Fdj_h("Fdj_h", Fdnz), Foj_h("Foj_h", Fonz);
6130e3ece09SJunchao Zhang     MatRowMapKokkosViewHost Fdjmap_h("Fdjmap_h", Fdnz + 1), Fojmap_h("Fojmap_h", Fonz + 1); // +1 to make csr
6140e3ece09SJunchao Zhang     MatRowMapKokkosViewHost Fdjperm_h("Fdjperm_h", FdnzDups), Fojperm_h("Fojperm_h", FonzDups);
6150e3ece09SJunchao Zhang     MatColIdxType          *Fdj = Fdj_h.data(), *Foj = Foj_h.data();
6160e3ece09SJunchao Zhang     MatRowMapType          *Fdjmap = Fdjmap_h.data(), *Fojmap = Fojmap_h.data();
6170e3ece09SJunchao Zhang     MatRowMapType          *Fdjperm = Fdjperm_h.data(), *Fojperm = Fojperm_h.data();
6180e3ece09SJunchao Zhang 
6190e3ece09SJunchao Zhang     // Scan recvColSorted[] again, and fill j, jmap, jperm for Fd and Fo
6200e3ece09SJunchao Zhang     Fdjmap[0] = 0;
6210e3ece09SJunchao Zhang     Fojmap[0] = 0;
6220e3ece09SJunchao Zhang     FnzDups   = 0;
6230e3ece09SJunchao Zhang     Fdnz      = 0;
6240e3ece09SJunchao Zhang     Fonz      = 0;
6250e3ece09SJunchao Zhang     iter      = 0; // iter over received rows
6260e3ece09SJunchao Zhang     while (iter < recvRowCnt) {
6270e3ece09SJunchao Zhang       PetscInt curRowIdx = irootloc[recvRowPerm[iter]]; // current row idx
6280e3ece09SJunchao Zhang       PetscInt dupRows   = 1;                           // It has this many contributing rows (of various lengths)
6290e3ece09SJunchao Zhang       PetscInt nz        = 0;                           // nz (with dups) in the current row
6300e3ece09SJunchao Zhang 
6310e3ece09SJunchao Zhang       while (iter + dupRows < recvRowCnt && irootloc[recvRowPerm[iter + dupRows]] == curRowIdx) dupRows++;
6320e3ece09SJunchao Zhang       for (PetscInt d = 0; d < dupRows; d++) {
6330e3ece09SJunchao Zhang         PetscInt i = recvRowPerm[iter + d];
6340e3ece09SJunchao Zhang         nz += recvRowLen[i + 1] - recvRowLen[i];
6350e3ece09SJunchao Zhang       }
6360e3ece09SJunchao Zhang 
6370e3ece09SJunchao Zhang       PetscInt *jbuf = recvColSorted + FnzDups;
6380e3ece09SJunchao Zhang       // Scan columns (in jbuf[0,nz) of this row, copy them and their permutation to j[] and jperm[] of Fd and Fo
6390e3ece09SJunchao Zhang       PetscInt cur = 0;
6400e3ece09SJunchao Zhang       while (cur < nz) {
6410e3ece09SJunchao Zhang         PetscInt curColIdx = jbuf[cur];
6420e3ece09SJunchao Zhang         PetscInt dups      = 1;
6430e3ece09SJunchao Zhang 
6440e3ece09SJunchao Zhang         while (cur + dups < nz && jbuf[cur + dups] == curColIdx) dups++;
6450e3ece09SJunchao Zhang         if (curColIdx >= cstart && curColIdx < cend) {
6460e3ece09SJunchao Zhang           Fdj[Fdnz]        = curColIdx - cstart; // easily convert to local
6470e3ece09SJunchao Zhang           Fdjmap[Fdnz + 1] = Fdjmap[Fdnz] + dups;
6480e3ece09SJunchao Zhang           for (PetscInt j = 0; j < dups; j++) Fdjperm[Fdjmap[Fdnz] + j] = recvNzPermSorted[FnzDups + j];
6490e3ece09SJunchao Zhang           FdnzDups += dups;
6500e3ece09SJunchao Zhang           Fdnz++;
6510e3ece09SJunchao Zhang         } else {
6520e3ece09SJunchao Zhang           Foj[Fonz]        = curColIdx; // in global
6530e3ece09SJunchao Zhang           Fojmap[Fonz + 1] = Fojmap[Fonz] + dups;
6540e3ece09SJunchao Zhang           for (PetscInt j = 0; j < dups; j++) Fojperm[Fojmap[Fonz] + j] = recvNzPermSorted[FnzDups + j];
6550e3ece09SJunchao Zhang           FonzDups += dups;
6560e3ece09SJunchao Zhang           Fonz++;
6570e3ece09SJunchao Zhang         }
6580e3ece09SJunchao Zhang         cur += dups;
6590e3ece09SJunchao Zhang         FnzDups += dups;
6600e3ece09SJunchao Zhang       }
6610e3ece09SJunchao Zhang       iter += dupRows; // Move to next unique row
6620e3ece09SJunchao Zhang     }
6630e3ece09SJunchao Zhang     PetscCall(PetscFree4(recvRowPerm, recvColSorted, recvNzPerm, recvNzPermSorted));
6640e3ece09SJunchao Zhang     PetscCall(PetscFree5(sendRowLen, recvRowLen, sdisp, rdisp, reqs));
6650e3ece09SJunchao Zhang 
6660e3ece09SJunchao Zhang     // Combine global column indices in garray1[] and Foj[]
6670e3ece09SJunchao Zhang     PetscInt n2, *garray2;
6680e3ece09SJunchao Zhang 
6690e3ece09SJunchao Zhang     PetscCall(ReduceTwoSetsOfGlobalIndices(n1, garray1, Fonz, Foj, &n2, &garray2, map));
6700e3ece09SJunchao Zhang     mm->sf       = reduceSF;
6710e3ece09SJunchao Zhang     mm->leafBuf  = MatScalarKokkosView("leafBuf", nleaves);
6720e3ece09SJunchao Zhang     mm->rootBuf  = MatScalarKokkosView("rootBuf", nroots);
673*aaa8cc7dSPierre Jolivet     mm->garray   = garray2; // give ownership, so no free
6740e3ece09SJunchao Zhang     mm->n        = n2;
6750e3ece09SJunchao Zhang     mm->E_NzLeft = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), E_NzLeft_h);
6760e3ece09SJunchao Zhang     mm->Fdjmap   = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Fdjmap_h);
6770e3ece09SJunchao Zhang     mm->Fdjperm  = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Fdjperm_h);
6780e3ece09SJunchao Zhang     mm->Fojmap   = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Fojmap_h);
6790e3ece09SJunchao Zhang     mm->Fojperm  = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Fojperm_h);
6800e3ece09SJunchao Zhang 
6810e3ece09SJunchao Zhang     // Output Fd and Fo in KokkosCsrMatrix format
6820e3ece09SJunchao Zhang     MatScalarKokkosView Fda_d("Fda_d", Fdnz);
6830e3ece09SJunchao Zhang     MatRowMapKokkosView Fdi_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Fdi_h);
6840e3ece09SJunchao Zhang     MatColIdxKokkosView Fdj_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Fdj_h);
6850e3ece09SJunchao Zhang     MatScalarKokkosView Foa_d("Foa_d", Fonz);
6860e3ece09SJunchao Zhang     MatRowMapKokkosView Foi_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Foi_h);
6870e3ece09SJunchao Zhang     MatColIdxKokkosView Foj_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Foj_h);
6880e3ece09SJunchao Zhang 
6890e3ece09SJunchao Zhang     PetscCallCXX(mm->Fd = KokkosCsrMatrix("Fd", Fm, cend - cstart, Fdnz, Fda_d, Fdi_d, Fdj_d));
6900e3ece09SJunchao Zhang     PetscCallCXX(mm->Fo = KokkosCsrMatrix("Fo", Fm, n2, Fonz, Foa_d, Foi_d, Foj_d)); // Fo's column size is n2, length of garray2[]
6910e3ece09SJunchao Zhang 
6920e3ece09SJunchao Zhang     // Compute kernel launch parameters in merging E
6930e3ece09SJunchao Zhang     PetscInt teamSize, vectorLength, rowsPerTeam;
6940e3ece09SJunchao Zhang 
6950e3ece09SJunchao Zhang     teamSize = vectorLength = rowsPerTeam = -1;
6960e3ece09SJunchao Zhang     PetscCall(MatMergeGetLaunchParameters<DefaultExecutionSpace>(Em, Enz, -1, teamSize, vectorLength, rowsPerTeam));
6970e3ece09SJunchao Zhang     mm->E_TeamSize     = teamSize;
6980e3ece09SJunchao Zhang     mm->E_VectorLength = vectorLength;
6990e3ece09SJunchao Zhang     mm->E_RowsPerTeam  = rowsPerTeam;
7000e3ece09SJunchao Zhang   } else PetscCheck(reuse == MAT_REUSE_MATRIX, comm, PETSC_ERR_PLIB, "Unsupported MatReuse enum %d", reuse);
7010e3ece09SJunchao Zhang 
7020e3ece09SJunchao Zhang   // Handy aliases
7030e3ece09SJunchao Zhang   auto       &Aa           = A.values;
7040e3ece09SJunchao Zhang   auto       &Ba           = B.values;
7050e3ece09SJunchao Zhang   const auto &Ai           = A.graph.row_map;
7060e3ece09SJunchao Zhang   const auto &Bi           = B.graph.row_map;
7070e3ece09SJunchao Zhang   const auto &E_NzLeft     = mm->E_NzLeft;
7080e3ece09SJunchao Zhang   auto       &leafBuf      = mm->leafBuf;
7090e3ece09SJunchao Zhang   auto       &rootBuf      = mm->rootBuf;
7100e3ece09SJunchao Zhang   PetscSF     reduceSF     = mm->sf;
7110e3ece09SJunchao Zhang   PetscInt    Em           = A.numRows();
7120e3ece09SJunchao Zhang   PetscInt    teamSize     = mm->E_TeamSize;
7130e3ece09SJunchao Zhang   PetscInt    vectorLength = mm->E_VectorLength;
7140e3ece09SJunchao Zhang   PetscInt    rowsPerTeam  = mm->E_RowsPerTeam;
7150e3ece09SJunchao Zhang   PetscInt    workSets     = (Em + rowsPerTeam - 1) / rowsPerTeam;
7160e3ece09SJunchao Zhang 
7170e3ece09SJunchao Zhang   // Copy rows in A/B of E to leafBuf, then pass it to rootBuf
7180e3ece09SJunchao Zhang   PetscCallCXX(Kokkos::parallel_for(
7190e3ece09SJunchao Zhang     Kokkos::TeamPolicy<>(workSets, teamSize, vectorLength), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) {
7200e3ece09SJunchao Zhang       Kokkos::parallel_for(Kokkos::TeamThreadRange(t, 0, rowsPerTeam), [&](PetscInt k) {
7210e3ece09SJunchao Zhang         PetscInt i = t.league_rank() * rowsPerTeam + k; // i-th row in F
7220e3ece09SJunchao Zhang         if (i < Em) {
7230e3ece09SJunchao Zhang           PetscInt disp   = Ai(i) + Bi(i);
7240e3ece09SJunchao Zhang           PetscInt alen   = Ai(i + 1) - Ai(i);
7250e3ece09SJunchao Zhang           PetscInt blen   = Bi(i + 1) - Bi(i);
7260e3ece09SJunchao Zhang           PetscInt nzleft = E_NzLeft(i);
7270e3ece09SJunchao Zhang 
7280e3ece09SJunchao Zhang           Kokkos::parallel_for(Kokkos::ThreadVectorRange(t, alen + blen), [&](PetscInt j) {
7290e3ece09SJunchao Zhang             MatScalar &val = leafBuf(disp + j);
7300e3ece09SJunchao Zhang             if (j < nzleft) { // B left
7310e3ece09SJunchao Zhang               val = Ba(Bi(i) + j);
7320e3ece09SJunchao Zhang             } else if (j < nzleft + alen) { // diag A
7330e3ece09SJunchao Zhang               val = Aa(Ai(i) + j - nzleft);
7340e3ece09SJunchao Zhang             } else { // B right
7350e3ece09SJunchao Zhang               val = Ba(Bi(i) + j - alen);
736f0e6e2d1SJunchao Zhang             }
737f0e6e2d1SJunchao Zhang           });
738f0e6e2d1SJunchao Zhang         }
739f0e6e2d1SJunchao Zhang       });
7400e3ece09SJunchao Zhang     }));
7410e3ece09SJunchao Zhang   PetscCall(PetscSFReduceWithMemTypeBegin(reduceSF, MPIU_SCALAR, PETSC_MEMTYPE_KOKKOS, leafBuf.data(), PETSC_MEMTYPE_KOKKOS, rootBuf.data(), MPI_REPLACE));
742f0e6e2d1SJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
743f0e6e2d1SJunchao Zhang }
7440e3ece09SJunchao Zhang 
745*aaa8cc7dSPierre Jolivet // To finish MatMPIAIJKokkosReduce.
7460e3ece09SJunchao Zhang static PetscErrorCode MatMPIAIJKokkosReduceEnd(MPI_Comm comm, KokkosCsrMatrix A, KokkosCsrMatrix B, PetscInt cstart, PetscInt cend, const PetscInt *garray1, PetscSF ownerSF, MatReuse reuse, PetscInt *map, MatMatStruct_AtB *mm)
7470e3ece09SJunchao Zhang {
7480e3ece09SJunchao Zhang   PetscFunctionBegin;
7490e3ece09SJunchao Zhang   auto       &leafBuf  = mm->leafBuf;
7500e3ece09SJunchao Zhang   auto       &rootBuf  = mm->rootBuf;
7510e3ece09SJunchao Zhang   auto       &Fda      = mm->Fd.values;
7520e3ece09SJunchao Zhang   const auto &Fdjmap   = mm->Fdjmap;
7530e3ece09SJunchao Zhang   const auto &Fdjperm  = mm->Fdjperm;
7540e3ece09SJunchao Zhang   auto        Fdnz     = mm->Fd.nnz();
7550e3ece09SJunchao Zhang   auto       &Foa      = mm->Fo.values;
7560e3ece09SJunchao Zhang   const auto &Fojmap   = mm->Fojmap;
7570e3ece09SJunchao Zhang   const auto &Fojperm  = mm->Fojperm;
7580e3ece09SJunchao Zhang   auto        Fonz     = mm->Fo.nnz();
7590e3ece09SJunchao Zhang   PetscSF     reduceSF = mm->sf;
7600e3ece09SJunchao Zhang 
7610e3ece09SJunchao Zhang   PetscCall(PetscSFReduceEnd(reduceSF, MPIU_SCALAR, leafBuf.data(), rootBuf.data(), MPI_REPLACE));
7620e3ece09SJunchao Zhang 
7630e3ece09SJunchao Zhang   // Reduce data in rootBuf to Fd and Fo
7640e3ece09SJunchao Zhang   PetscCallCXX(Kokkos::parallel_for(
7650e3ece09SJunchao Zhang     Fdnz, KOKKOS_LAMBDA(const MatRowMapType i) {
7660e3ece09SJunchao Zhang       PetscScalar sum = 0.0;
7670e3ece09SJunchao Zhang       for (MatRowMapType k = Fdjmap(i); k < Fdjmap(i + 1); k++) sum += rootBuf(Fdjperm(k));
7680e3ece09SJunchao Zhang       Fda(i) = sum;
7690e3ece09SJunchao Zhang     }));
7700e3ece09SJunchao Zhang 
7710e3ece09SJunchao Zhang   PetscCallCXX(Kokkos::parallel_for(
7720e3ece09SJunchao Zhang     Fonz, KOKKOS_LAMBDA(const MatRowMapType i) {
7730e3ece09SJunchao Zhang       PetscScalar sum = 0.0;
7740e3ece09SJunchao Zhang       for (MatRowMapType k = Fojmap(i); k < Fojmap(i + 1); k++) sum += rootBuf(Fojperm(k));
7750e3ece09SJunchao Zhang       Foa(i) = sum;
7760e3ece09SJunchao Zhang     }));
7770e3ece09SJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
7780e3ece09SJunchao Zhang }
7790e3ece09SJunchao Zhang 
7800e3ece09SJunchao Zhang /*
7810e3ece09SJunchao Zhang   MatMPIAIJKokkosBcast - Bcast local rows of a MPIAIJKOKKOS matrix (E) to produce a local matrix (F, stored in mm) in split form
7820e3ece09SJunchao Zhang 
7830e3ece09SJunchao Zhang   This is a complex routine. It is essentially the MPIAIJKOKKOS counterpart of MatGetBrowsOfAoCols_MPIAIJ, but supports
7840e3ece09SJunchao Zhang   device and involves various index mapping.
7850e3ece09SJunchao Zhang 
7860e3ece09SJunchao Zhang   In the given ownerSF, leaves correspond to rows in F, and roots correspond to rows in E. Roots may connect to multiple leaves.
7870e3ece09SJunchao Zhang   Suppose F's j-th row is connected to a root identified by PetscSFNode (k,i), it means we need to bcast the i-th row of E on rank k
7880e3ece09SJunchao Zhang   to j-th row of F. ownerSF is not an arbitrary SF, instead it is the Mvctx of another MPIAIJ matrix A that is able to perform A*E.
7890e3ece09SJunchao Zhang   F has the same column layout as E.
7900e3ece09SJunchao Zhang 
7910e3ece09SJunchao Zhang   Conceptually F has global column indices. In this routine, we spit F into diagonal Fd and off-diagonal Fo.
792*aaa8cc7dSPierre Jolivet   Fd uses local column indices, which are easy to compute. We just need to subtract the "local column range start" from the global indices.
7930e3ece09SJunchao Zhang   Fo had global column indices at first. We will reduce them into local ones. In doing that, we also take into account the global
7940e3ece09SJunchao Zhang   column indices that E's off-diag block has. Let's say there are n1 such indices stored in garray1[]. We will reduce them along with
7950e3ece09SJunchao Zhang   column indices in Fo and update Fo with local indices.
7960e3ece09SJunchao Zhang 
7970e3ece09SJunchao Zhang    Input Parameters:
7980e3ece09SJunchao Zhang +   E       - the MPIAIJKOKKOS matrix
7990e3ece09SJunchao Zhang .   ownerSF - the ownership SF (nonsignificant in MAT_REUSE_MATRIX)
8000e3ece09SJunchao Zhang .   reuse   - either MAT_INITIAL_MATRIX or MAT_REUSE_MATRIX
8010e3ece09SJunchao Zhang -   mm      - to stash matproduct intermediate data structures
8020e3ece09SJunchao Zhang 
8030e3ece09SJunchao Zhang     Output Parameters:
8040e3ece09SJunchao Zhang +   map[n1] - allocated by caller. It maps garray1[] to garray2[]. See more at ReduceTwoSetsOfGlobalIndices.
8050e3ece09SJunchao Zhang -   mm      - contains various info, such as garray2[], Fd, Fo, etc.
8060e3ece09SJunchao Zhang 
8070e3ece09SJunchao Zhang     Notes:
8080e3ece09SJunchao Zhang     When reuse = MAT_REUSE_MATRIX, ownerSF, map are not significant.
8090e3ece09SJunchao Zhang     The routine is provide in split-phase form MatMPIAIJKokkosBcastBegin/End() to provide computation/communication opportunities.
8100e3ece09SJunchao Zhang */
8110e3ece09SJunchao Zhang static PetscErrorCode MatMPIAIJKokkosBcastBegin(Mat E, PetscSF ownerSF, MatReuse reuse, PetscInt *map, MatMatStruct_AB *mm)
8120e3ece09SJunchao Zhang {
8130e3ece09SJunchao Zhang   Mat_MPIAIJ       *empi = static_cast<Mat_MPIAIJ *>(E->data);
8140e3ece09SJunchao Zhang   Mat               A = empi->A, B = empi->B; // diag and off-diag
8150e3ece09SJunchao Zhang   Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr), *bkok = static_cast<Mat_SeqAIJKokkos *>(B->spptr);
8160e3ece09SJunchao Zhang   PetscInt          Em = E->rmap->n; // #local rows
8170e3ece09SJunchao Zhang   MPI_Comm          comm;
8180e3ece09SJunchao Zhang 
8190e3ece09SJunchao Zhang   PetscFunctionBegin;
8200e3ece09SJunchao Zhang   PetscCallMPI(PetscObjectGetComm((PetscObject)E, &comm));
8210e3ece09SJunchao Zhang   if (reuse == MAT_INITIAL_MATRIX) {
8220e3ece09SJunchao Zhang     Mat_SeqAIJ     *aseq = static_cast<Mat_SeqAIJ *>(A->data), *bseq = static_cast<Mat_SeqAIJ *>(B->data);
8230e3ece09SJunchao Zhang     PetscInt        n1 = B->cmap->n, *Ai = aseq->i, *Aj = aseq->j, *Bi = bseq->i, *Bj = bseq->j;
8240e3ece09SJunchao Zhang     const PetscInt *garray1 = empi->garray; // its size is n1
8250e3ece09SJunchao Zhang     PetscInt        cstart, cend;
8260e3ece09SJunchao Zhang     PetscSF         bcastSF;
8270e3ece09SJunchao Zhang 
8280e3ece09SJunchao Zhang     PetscCall(MatGetOwnershipRangeColumn(E, &cstart, &cend));
8290e3ece09SJunchao Zhang 
8300e3ece09SJunchao Zhang     // Count how many nonzeros of each row in E are in the left of the diag block [cstart,cend)
8310e3ece09SJunchao Zhang     PetscIntKokkosViewHost E_NzLeft_h("E_NzLeft_h", Em), E_RowLen_h("E_RowLen_h", Em);
8320e3ece09SJunchao Zhang     PetscInt              *E_NzLeft = E_NzLeft_h.data(), *E_RowLen = E_RowLen_h.data();
8330e3ece09SJunchao Zhang     for (PetscInt i = 0; i < Em; i++) {
8340e3ece09SJunchao Zhang       const PetscInt *first, *last, *it;
8350e3ece09SJunchao Zhang       PetscInt        count, step;
8360e3ece09SJunchao Zhang       // std::lower_bound(first,last,cstart), but need to use global column indices
8370e3ece09SJunchao Zhang       first = Bj + Bi[i];
8380e3ece09SJunchao Zhang       last  = Bj + Bi[i + 1];
8390e3ece09SJunchao Zhang       count = last - first;
8400e3ece09SJunchao Zhang       while (count > 0) {
8410e3ece09SJunchao Zhang         it   = first;
8420e3ece09SJunchao Zhang         step = count / 2;
8430e3ece09SJunchao Zhang         it += step;
8440e3ece09SJunchao Zhang         if (empi->garray[*it] < cstart) { // map local to global
8450e3ece09SJunchao Zhang           first = ++it;
8460e3ece09SJunchao Zhang           count -= step + 1;
8470e3ece09SJunchao Zhang         } else count = step;
8480e3ece09SJunchao Zhang       }
8490e3ece09SJunchao Zhang       E_NzLeft[i] = first - (Bj + Bi[i]);
8500e3ece09SJunchao Zhang       E_RowLen[i] = (Ai[i + 1] - Ai[i]) + (Bi[i + 1] - Bi[i]);
8510e3ece09SJunchao Zhang     }
8520e3ece09SJunchao Zhang 
8530e3ece09SJunchao Zhang     // Compute row pointer Fi of F
8540e3ece09SJunchao Zhang     PetscInt *Fi, Fm, Fnz;
8550e3ece09SJunchao Zhang     PetscCall(PetscSFGetGraph(ownerSF, NULL, &Fm, NULL, NULL)); // Fm = #rows of F = nleaves of ownerSF
8560e3ece09SJunchao Zhang     PetscCall(PetscMalloc1(Fm + 1, &Fi));
8570e3ece09SJunchao Zhang     Fi[0] = 0;
8580e3ece09SJunchao Zhang     PetscCall(PetscSFBcastWithMemTypeBegin(ownerSF, MPIU_INT, PETSC_MEMTYPE_HOST, E_RowLen, PETSC_MEMTYPE_HOST, &Fi[1], MPI_REPLACE));
8590e3ece09SJunchao Zhang     PetscCall(PetscSFBcastEnd(ownerSF, MPIU_INT, E_RowLen, &Fi[1], MPI_REPLACE));
8600e3ece09SJunchao Zhang     for (PetscInt i = 0; i < Fm; i++) Fi[i + 1] += Fi[i];
8610e3ece09SJunchao Zhang     Fnz = Fi[Fm];
8620e3ece09SJunchao Zhang 
8630e3ece09SJunchao Zhang     // Build the real PetscSF for bcasting E rows (buffer to buffer)
8640e3ece09SJunchao Zhang     const PetscMPIInt *iranks, *ranks;
8650e3ece09SJunchao Zhang     const PetscInt    *ioffset, *irootloc, *roffset;
8660e3ece09SJunchao Zhang     PetscInt           niranks, nranks, *sdisp, *rdisp;
8670e3ece09SJunchao Zhang     MPI_Request       *reqs;
8680e3ece09SJunchao Zhang     PetscMPIInt        tag;
8690e3ece09SJunchao Zhang 
8700e3ece09SJunchao Zhang     PetscCall(PetscSFGetLeafRanks(ownerSF, &niranks, &iranks, &ioffset, &irootloc)); // get leaf ranks referencing roots on this process
8710e3ece09SJunchao Zhang     PetscCall(PetscSFGetRootRanks(ownerSF, &nranks, &ranks, &roffset, NULL, NULL));  // recv info
8720e3ece09SJunchao Zhang     PetscCall(PetscMalloc3(niranks + 1, &sdisp, nranks, &rdisp, niranks + nranks, &reqs));
8730e3ece09SJunchao Zhang 
8740e3ece09SJunchao Zhang     sdisp[0] = 0; // send displacement
8750e3ece09SJunchao Zhang     for (PetscInt i = 0; i < niranks; i++) {
8760e3ece09SJunchao Zhang       sdisp[i + 1] = sdisp[i];
8770e3ece09SJunchao Zhang       for (PetscInt j = ioffset[i]; j < ioffset[i + 1]; j++) {
8780e3ece09SJunchao Zhang         PetscInt r = irootloc[j]; // row to be sent
8790e3ece09SJunchao Zhang         sdisp[i + 1] += E_RowLen[r];
8800e3ece09SJunchao Zhang       }
8810e3ece09SJunchao Zhang     }
8820e3ece09SJunchao Zhang 
8830e3ece09SJunchao Zhang     PetscCallMPI(PetscCommGetNewTag(comm, &tag));
8840e3ece09SJunchao Zhang     for (PetscInt i = 0; i < nranks; i++) PetscCallMPI(MPI_Irecv(&rdisp[i], 1, MPIU_INT, ranks[i], tag, comm, &reqs[i]));
8850e3ece09SJunchao Zhang     for (PetscInt i = 0; i < niranks; i++) PetscCallMPI(MPI_Isend(&sdisp[i], 1, MPIU_INT, iranks[i], tag, comm, &reqs[nranks + i]));
8860e3ece09SJunchao Zhang     PetscCallMPI(MPI_Waitall(niranks + nranks, reqs, MPI_STATUSES_IGNORE));
8870e3ece09SJunchao Zhang 
8880e3ece09SJunchao Zhang     PetscInt     nleaves = Fnz;            // leaves are nonzeros I will receive
8890e3ece09SJunchao Zhang     PetscInt     nroots  = sdisp[niranks]; // roots are nonzeros I will send
8900e3ece09SJunchao Zhang     PetscSFNode *iremote;                  // give ownership to bcastSF
8910e3ece09SJunchao Zhang     PetscCall(PetscMalloc1(nleaves, &iremote));
8920e3ece09SJunchao Zhang     for (PetscInt i = 0; i < nranks; i++) { // for each sender rank
8930e3ece09SJunchao Zhang       PetscInt k = 0;
8940e3ece09SJunchao Zhang       for (PetscInt j = Fi[roffset[i]]; j < Fi[roffset[i + 1]]; j++) { // I will receive rows [roffset[i], roffset[i+1]) of F from ranks[i]
8950e3ece09SJunchao Zhang         iremote[j].rank  = ranks[i];
8960e3ece09SJunchao Zhang         iremote[j].index = rdisp[i] + k; // their root location
8970e3ece09SJunchao Zhang         k++;
8980e3ece09SJunchao Zhang       }
8990e3ece09SJunchao Zhang     }
9000e3ece09SJunchao Zhang     PetscCall(PetscSFCreate(comm, &bcastSF));
9010e3ece09SJunchao Zhang     PetscCall(PetscSFSetGraph(bcastSF, nroots, nleaves, NULL, PETSC_OWN_POINTER, iremote, PETSC_OWN_POINTER));
9020e3ece09SJunchao Zhang     PetscCall(PetscFree3(sdisp, rdisp, reqs));
9030e3ece09SJunchao Zhang 
9040e3ece09SJunchao Zhang     // Build a plan (rowoffset, irootloc, E_NzLeft) to copy rows in E to rootdata of bcastSF in parallel
9050e3ece09SJunchao Zhang     PetscIntKokkosViewHost rowoffset_h("rowoffset_h", ioffset[niranks] + 1);
9060e3ece09SJunchao Zhang     PetscInt              *rowoffset = rowoffset_h.data(); // for each entry (row) indicated in irootloc[], we calculate its destinate offset in copying
9070e3ece09SJunchao Zhang     rowoffset[0]                     = 0;
9080e3ece09SJunchao Zhang     for (PetscInt i = 0; i < ioffset[niranks]; i++) { rowoffset[i + 1] += rowoffset[i] + E_RowLen[irootloc[i]]; }
9090e3ece09SJunchao Zhang 
9100e3ece09SJunchao Zhang     // Copy (global) column indices of the needed rows in E to a buffer, and then bcast to Fj[]
9110e3ece09SJunchao Zhang     PetscInt *jbuf, *Fj;
9120e3ece09SJunchao Zhang     PetscCall(PetscMalloc2(nroots, &jbuf, Fnz, &Fj));
9130e3ece09SJunchao Zhang     for (PetscInt k = 0; k < ioffset[niranks]; k++) {
9140e3ece09SJunchao Zhang       PetscInt  i      = irootloc[k]; // row to be copied
9150e3ece09SJunchao Zhang       PetscInt *buf    = &jbuf[rowoffset[k]];
9160e3ece09SJunchao Zhang       PetscInt  nzLeft = E_NzLeft[i];
9170e3ece09SJunchao Zhang       PetscInt  alen = Ai[i + 1] - Ai[i], blen = Bi[i + 1] - Bi[i];
9180e3ece09SJunchao Zhang       for (PetscInt j = 0; j < alen + blen; j++) {
9190e3ece09SJunchao Zhang         if (j < nzLeft) {
9200e3ece09SJunchao Zhang           buf[j] = empi->garray[Bj[Bi[i] + j]]; // left B, in global
9210e3ece09SJunchao Zhang         } else if (j < nzLeft + alen) {
9220e3ece09SJunchao Zhang           buf[j] = Aj[Ai[i] + j - nzLeft] + cstart; // diag A, also in global
9230e3ece09SJunchao Zhang         } else {
9240e3ece09SJunchao Zhang           buf[j] = empi->garray[Bj[Bi[i] + j - alen]]; // right B, in global
9250e3ece09SJunchao Zhang         }
9260e3ece09SJunchao Zhang       }
9270e3ece09SJunchao Zhang     }
9280e3ece09SJunchao Zhang     PetscCall(PetscSFBcastWithMemTypeBegin(bcastSF, MPIU_INT, PETSC_MEMTYPE_HOST, jbuf, PETSC_MEMTYPE_HOST, Fj, MPI_REPLACE));
9290e3ece09SJunchao Zhang     PetscCall(PetscSFBcastEnd(bcastSF, MPIU_INT, jbuf, Fj, MPI_REPLACE));
9300e3ece09SJunchao Zhang 
9310e3ece09SJunchao Zhang     // Build a plan (i.e., F_NzLeft) to split F into Fd and Fo
9320e3ece09SJunchao Zhang     MatRowMapKokkosViewHost Fdi_h("Fdi_h", Fm + 1), Foi_h("Foi_h", Fm + 1); // row pointer of Fd, Fo
9330e3ece09SJunchao Zhang     MatColIdxKokkosViewHost F_NzLeft_h("F_NzLeft_h", Fm);                   // split each row of F into Left, Diag, Right. We only need to record #nz in Left and Diag.
9340e3ece09SJunchao Zhang     MatRowMapType          *Fdi = Fdi_h.data(), *Foi = Foi_h.data();
9350e3ece09SJunchao Zhang     MatColIdxType          *F_NzLeft = F_NzLeft_h.data();
9360e3ece09SJunchao Zhang 
9370e3ece09SJunchao Zhang     Fdi[0] = Foi[0] = 0;
9380e3ece09SJunchao Zhang     for (PetscInt i = 0; i < Fm; i++) {
9390e3ece09SJunchao Zhang       PetscInt *first, *last, *lb1, *lb2;
9400e3ece09SJunchao Zhang       // cut the row into: Left, [cstart, cend), Right
9410e3ece09SJunchao Zhang       first       = Fj + Fi[i];
9420e3ece09SJunchao Zhang       last        = Fj + Fi[i + 1];
9430e3ece09SJunchao Zhang       lb1         = std::lower_bound(first, last, cstart);
9440e3ece09SJunchao Zhang       F_NzLeft[i] = lb1 - first;
9450e3ece09SJunchao Zhang       lb2         = std::lower_bound(first, last, cend);
9460e3ece09SJunchao Zhang       Fdi[i + 1]  = lb2 - lb1;                        // row i length in Fdi
9470e3ece09SJunchao Zhang       Foi[i + 1]  = (Fi[i + 1] - Fi[i]) - Fdi[i + 1]; // row i length in Foi
9480e3ece09SJunchao Zhang     }
9490e3ece09SJunchao Zhang     for (PetscInt i = 0; i < Fm; i++) {
9500e3ece09SJunchao Zhang       Fdi[i + 1] += Fdi[i];
9510e3ece09SJunchao Zhang       Foi[i + 1] += Foi[i];
9520e3ece09SJunchao Zhang     }
9530e3ece09SJunchao Zhang 
9540e3ece09SJunchao Zhang     // Fill Fdj[] and Foj[], i.e., columns of Fd and Fo. Fdj[] are local, but Foj[] are not yet.
9550e3ece09SJunchao Zhang     PetscInt                Fdnz = Fdi[Fm], Fonz = Foi[Fm];
9560e3ece09SJunchao Zhang     MatColIdxKokkosViewHost Fdj_h("Fdj_h", Fdnz), Foj_h("Foj_h", Fonz);
9570e3ece09SJunchao Zhang     MatColIdxType          *Fdj = Fdj_h.data(), *Foj = Foj_h.data(), gid;
9580e3ece09SJunchao Zhang 
9590e3ece09SJunchao Zhang     for (PetscInt i = 0; i < Fm; i++) {
9600e3ece09SJunchao Zhang       PetscInt nzLeft = F_NzLeft[i];
9610e3ece09SJunchao Zhang       PetscInt len    = Fdi[i + 1] - Fdi[i]; // diag row len
9620e3ece09SJunchao Zhang       for (PetscInt j = 0; j < Fi[i + 1] - Fi[i]; j++) {
9630e3ece09SJunchao Zhang         gid = Fj[Fi[i] + j];
9640e3ece09SJunchao Zhang         if (j < nzLeft) { // left, in global
9650e3ece09SJunchao Zhang           Foj[Foi[i] + j] = gid;
9660e3ece09SJunchao Zhang         } else if (j < nzLeft + len) { // diag, in local
9670e3ece09SJunchao Zhang           Fdj[Fdi[i] + j - nzLeft] = gid - cstart;
9680e3ece09SJunchao Zhang         } else { // right, in global
9690e3ece09SJunchao Zhang           Foj[Foi[i] + j - len] = gid;
9700e3ece09SJunchao Zhang         }
9710e3ece09SJunchao Zhang       }
9720e3ece09SJunchao Zhang     }
9730e3ece09SJunchao Zhang     PetscCall(PetscFree2(jbuf, Fj));
9740e3ece09SJunchao Zhang     PetscCall(PetscFree(Fi));
9750e3ece09SJunchao Zhang 
9760e3ece09SJunchao Zhang     // Reduce global indices in Foj[] and garray1[] into local ones
9770e3ece09SJunchao Zhang     PetscInt n2, *garray2;
9780e3ece09SJunchao Zhang     PetscCall(ReduceTwoSetsOfGlobalIndices(n1, garray1, Fonz, Foj, &n2, &garray2, map));
9790e3ece09SJunchao Zhang 
9800e3ece09SJunchao Zhang     // Record the plans built above, for reuse
9810e3ece09SJunchao Zhang     PetscIntKokkosViewHost tmp(const_cast<PetscInt *>(irootloc), ioffset[niranks]); // irootloc[] is owned by ownerSF. We create a copy for safety
9820e3ece09SJunchao Zhang     PetscIntKokkosViewHost irootloc_h("irootloc_h", ioffset[niranks]);
9830e3ece09SJunchao Zhang     Kokkos::deep_copy(irootloc_h, tmp);
9840e3ece09SJunchao Zhang     mm->sf        = bcastSF;
9850e3ece09SJunchao Zhang     mm->E_NzLeft  = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), E_NzLeft_h);
9860e3ece09SJunchao Zhang     mm->F_NzLeft  = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), F_NzLeft_h);
9870e3ece09SJunchao Zhang     mm->irootloc  = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), irootloc_h);
9880e3ece09SJunchao Zhang     mm->rowoffset = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), rowoffset_h);
9890e3ece09SJunchao Zhang     mm->rootBuf   = MatScalarKokkosView("rootBuf", nroots);
9900e3ece09SJunchao Zhang     mm->leafBuf   = MatScalarKokkosView("leafBuf", nleaves);
9910e3ece09SJunchao Zhang     mm->garray    = garray2;
9920e3ece09SJunchao Zhang     mm->n         = n2;
9930e3ece09SJunchao Zhang 
9940e3ece09SJunchao Zhang     // Output Fd and Fo in KokkosCsrMatrix format
9950e3ece09SJunchao Zhang     MatScalarKokkosView Fda_d("Fda_d", Fdnz), Foa_d("Foa_d", Fonz);
9960e3ece09SJunchao Zhang     MatRowMapKokkosView Fdi_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Fdi_h);
9970e3ece09SJunchao Zhang     MatColIdxKokkosView Fdj_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Fdj_h);
9980e3ece09SJunchao Zhang     MatRowMapKokkosView Foi_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Foi_h);
9990e3ece09SJunchao Zhang     MatColIdxKokkosView Foj_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Foj_h);
10000e3ece09SJunchao Zhang 
10010e3ece09SJunchao Zhang     PetscCallCXX(mm->Fd = KokkosCsrMatrix("Fd", Fm, cend - cstart, Fdnz, Fda_d, Fdi_d, Fdj_d));
10020e3ece09SJunchao Zhang     PetscCallCXX(mm->Fo = KokkosCsrMatrix("Fo", Fm, n2, Fonz, Foa_d, Foi_d, Foj_d));
10030e3ece09SJunchao Zhang 
10040e3ece09SJunchao Zhang     // Compute kernel launch parameters in merging E or splitting F
10050e3ece09SJunchao Zhang     PetscInt teamSize, vectorLength, rowsPerTeam;
10060e3ece09SJunchao Zhang 
10070e3ece09SJunchao Zhang     teamSize = vectorLength = rowsPerTeam = -1;
10080e3ece09SJunchao Zhang     PetscCall(MatMergeGetLaunchParameters<DefaultExecutionSpace>(mm->irootloc.extent(0), mm->rootBuf.extent(0), -1, teamSize, vectorLength, rowsPerTeam));
10090e3ece09SJunchao Zhang     mm->E_TeamSize     = teamSize;
10100e3ece09SJunchao Zhang     mm->E_VectorLength = vectorLength;
10110e3ece09SJunchao Zhang     mm->E_RowsPerTeam  = rowsPerTeam;
10120e3ece09SJunchao Zhang 
10130e3ece09SJunchao Zhang     teamSize = vectorLength = rowsPerTeam = -1;
10140e3ece09SJunchao Zhang     PetscCall(MatMergeGetLaunchParameters<DefaultExecutionSpace>(Fm, Fnz, -1, teamSize, vectorLength, rowsPerTeam));
10150e3ece09SJunchao Zhang     mm->F_TeamSize     = teamSize;
10160e3ece09SJunchao Zhang     mm->F_VectorLength = vectorLength;
10170e3ece09SJunchao Zhang     mm->F_RowsPerTeam  = rowsPerTeam;
10180e3ece09SJunchao Zhang   } else PetscCheck(reuse == MAT_REUSE_MATRIX, comm, PETSC_ERR_PLIB, "Unsupported MatReuse enum %d", reuse);
10190e3ece09SJunchao Zhang 
10200e3ece09SJunchao Zhang   // Sync E's value to device
10210e3ece09SJunchao Zhang   akok->a_dual.sync_device();
10220e3ece09SJunchao Zhang   bkok->a_dual.sync_device();
10230e3ece09SJunchao Zhang 
10240e3ece09SJunchao Zhang   // Handy aliases
10250e3ece09SJunchao Zhang   const auto &Aa = akok->a_dual.view_device();
10260e3ece09SJunchao Zhang   const auto &Ba = bkok->a_dual.view_device();
10270e3ece09SJunchao Zhang   const auto &Ai = akok->i_dual.view_device();
10280e3ece09SJunchao Zhang   const auto &Bi = bkok->i_dual.view_device();
10290e3ece09SJunchao Zhang 
10300e3ece09SJunchao Zhang   // Fetch the plans
10310e3ece09SJunchao Zhang   PetscIntKokkosView  &E_NzLeft  = mm->E_NzLeft;
10320e3ece09SJunchao Zhang   PetscSF             &bcastSF   = mm->sf;
10330e3ece09SJunchao Zhang   MatScalarKokkosView &rootBuf   = mm->rootBuf;
10340e3ece09SJunchao Zhang   MatScalarKokkosView &leafBuf   = mm->leafBuf;
10350e3ece09SJunchao Zhang   PetscIntKokkosView  &irootloc  = mm->irootloc;
10360e3ece09SJunchao Zhang   PetscIntKokkosView  &rowoffset = mm->rowoffset;
10370e3ece09SJunchao Zhang 
10380e3ece09SJunchao Zhang   PetscInt teamSize     = mm->E_TeamSize;
10390e3ece09SJunchao Zhang   PetscInt vectorLength = mm->E_VectorLength;
10400e3ece09SJunchao Zhang   PetscInt rowsPerTeam  = mm->E_RowsPerTeam;
10410e3ece09SJunchao Zhang   PetscInt workSets     = (irootloc.extent(0) + rowsPerTeam - 1) / rowsPerTeam;
10420e3ece09SJunchao Zhang 
10430e3ece09SJunchao Zhang   // Copy rows in A/B of E to rootBuf, then bcast it to leafBuf
10440e3ece09SJunchao Zhang   PetscCallCXX(Kokkos::parallel_for(
10450e3ece09SJunchao Zhang     Kokkos::TeamPolicy<>(workSets, teamSize, vectorLength), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) {
10460e3ece09SJunchao Zhang       Kokkos::parallel_for(Kokkos::TeamThreadRange(t, 0, rowsPerTeam), [&](PetscInt k) {
10470e3ece09SJunchao Zhang         size_t r = t.league_rank() * rowsPerTeam + k; // r-th entry in irootloc[]
10480e3ece09SJunchao Zhang         if (r < irootloc.extent(0)) {
10490e3ece09SJunchao Zhang           PetscInt i      = irootloc(r); // row i of E
10500e3ece09SJunchao Zhang           PetscInt disp   = rowoffset(r);
10510e3ece09SJunchao Zhang           PetscInt alen   = Ai(i + 1) - Ai(i);
10520e3ece09SJunchao Zhang           PetscInt blen   = Bi(i + 1) - Bi(i);
10530e3ece09SJunchao Zhang           PetscInt nzleft = E_NzLeft(i);
10540e3ece09SJunchao Zhang 
10550e3ece09SJunchao Zhang           Kokkos::parallel_for(Kokkos::ThreadVectorRange(t, alen + blen), [&](PetscInt j) {
10560e3ece09SJunchao Zhang             if (j < nzleft) { // B left
10570e3ece09SJunchao Zhang               rootBuf(disp + j) = Ba(Bi(i) + j);
10580e3ece09SJunchao Zhang             } else if (j < nzleft + alen) { // diag A
10590e3ece09SJunchao Zhang               rootBuf(disp + j) = Aa(Ai(i) + j - nzleft);
10600e3ece09SJunchao Zhang             } else { // B right
10610e3ece09SJunchao Zhang               rootBuf(disp + j) = Ba(Bi(i) + j - alen);
10620e3ece09SJunchao Zhang             }
10630e3ece09SJunchao Zhang           });
10640e3ece09SJunchao Zhang         }
10650e3ece09SJunchao Zhang       });
10660e3ece09SJunchao Zhang     }));
10670e3ece09SJunchao Zhang   PetscCall(PetscSFBcastWithMemTypeBegin(bcastSF, MPIU_SCALAR, PETSC_MEMTYPE_KOKKOS, rootBuf.data(), PETSC_MEMTYPE_KOKKOS, leafBuf.data(), MPI_REPLACE));
10680e3ece09SJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
10690e3ece09SJunchao Zhang }
10700e3ece09SJunchao Zhang 
10710e3ece09SJunchao Zhang // To finish MatMPIAIJKokkosBcast.
10720e3ece09SJunchao Zhang static PetscErrorCode MatMPIAIJKokkosBcastEnd(Mat E, PetscSF ownerSF, MatReuse reuse, PetscInt *map, MatMatStruct_AB *mm)
10730e3ece09SJunchao Zhang {
10740e3ece09SJunchao Zhang   PetscFunctionBegin;
10750e3ece09SJunchao Zhang   const auto &Fd  = mm->Fd;
10760e3ece09SJunchao Zhang   const auto &Fo  = mm->Fo;
10770e3ece09SJunchao Zhang   const auto &Fdi = Fd.graph.row_map;
10780e3ece09SJunchao Zhang   const auto &Foi = Fo.graph.row_map;
10790e3ece09SJunchao Zhang   auto       &Fda = Fd.values;
10800e3ece09SJunchao Zhang   auto       &Foa = Fo.values;
10810e3ece09SJunchao Zhang   auto        Fm  = Fd.numRows();
10820e3ece09SJunchao Zhang 
10830e3ece09SJunchao Zhang   PetscIntKokkosView  &F_NzLeft     = mm->F_NzLeft;
10840e3ece09SJunchao Zhang   PetscSF             &bcastSF      = mm->sf;
10850e3ece09SJunchao Zhang   MatScalarKokkosView &rootBuf      = mm->rootBuf;
10860e3ece09SJunchao Zhang   MatScalarKokkosView &leafBuf      = mm->leafBuf;
10870e3ece09SJunchao Zhang   PetscInt             teamSize     = mm->F_TeamSize;
10880e3ece09SJunchao Zhang   PetscInt             vectorLength = mm->F_VectorLength;
10890e3ece09SJunchao Zhang   PetscInt             rowsPerTeam  = mm->F_RowsPerTeam;
10900e3ece09SJunchao Zhang   PetscInt             workSets     = (Fm + rowsPerTeam - 1) / rowsPerTeam;
10910e3ece09SJunchao Zhang 
10920e3ece09SJunchao Zhang   PetscCall(PetscSFBcastEnd(bcastSF, MPIU_SCALAR, rootBuf.data(), leafBuf.data(), MPI_REPLACE));
10930e3ece09SJunchao Zhang 
10940e3ece09SJunchao Zhang   // Update Fda and Foa with new data in leafBuf (as if it is Fa)
10950e3ece09SJunchao Zhang   PetscCallCXX(Kokkos::parallel_for(
10960e3ece09SJunchao Zhang     Kokkos::TeamPolicy<>(workSets, teamSize, vectorLength), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) {
10970e3ece09SJunchao Zhang       Kokkos::parallel_for(Kokkos::TeamThreadRange(t, 0, rowsPerTeam), [&](PetscInt k) {
10980e3ece09SJunchao Zhang         PetscInt i = t.league_rank() * rowsPerTeam + k; // i-th row in F
10990e3ece09SJunchao Zhang         if (i < Fm) {
11000e3ece09SJunchao Zhang           PetscInt nzLeft = F_NzLeft(i);
11010e3ece09SJunchao Zhang           PetscInt alen   = Fdi(i + 1) - Fdi(i);
11020e3ece09SJunchao Zhang           PetscInt blen   = Foi(i + 1) - Foi(i);
11030e3ece09SJunchao Zhang           PetscInt Fii    = Fdi(i) + Foi(i);
11040e3ece09SJunchao Zhang 
11050e3ece09SJunchao Zhang           Kokkos::parallel_for(Kokkos::ThreadVectorRange(t, alen + blen), [&](PetscInt j) {
11060e3ece09SJunchao Zhang             PetscScalar val = leafBuf(Fii + j);
11070e3ece09SJunchao Zhang             if (j < nzLeft) { // left
11080e3ece09SJunchao Zhang               Foa(Foi(i) + j) = val;
11090e3ece09SJunchao Zhang             } else if (j < nzLeft + alen) { // diag
11100e3ece09SJunchao Zhang               Fda(Fdi(i) + j - nzLeft) = val;
11110e3ece09SJunchao Zhang             } else { // right
11120e3ece09SJunchao Zhang               Foa(Foi(i) + j - alen) = val;
11130e3ece09SJunchao Zhang             }
11140e3ece09SJunchao Zhang           });
11150e3ece09SJunchao Zhang         }
11160e3ece09SJunchao Zhang       });
11170e3ece09SJunchao Zhang     }));
11180e3ece09SJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
11190e3ece09SJunchao Zhang }
11200e3ece09SJunchao Zhang 
11210e3ece09SJunchao Zhang static PetscErrorCode MatProductSymbolic_MPIAIJKokkos_AtB(Mat_Product *product, Mat A, Mat B, MatMatStruct_AtB *mm)
11220e3ece09SJunchao Zhang {
11230e3ece09SJunchao Zhang   Mat_MPIAIJ     *ampi = static_cast<Mat_MPIAIJ *>(A->data);
11240e3ece09SJunchao Zhang   Mat_MPIAIJ     *bmpi = static_cast<Mat_MPIAIJ *>(B->data);
11250e3ece09SJunchao Zhang   KokkosCsrMatrix Adt, Aot, Ad, Ao, Bd, Bo;
11260e3ece09SJunchao Zhang   PetscInt        cstart, cend;
11270e3ece09SJunchao Zhang   MPI_Comm        comm;
11280e3ece09SJunchao Zhang 
11290e3ece09SJunchao Zhang   PetscFunctionBegin;
11300e3ece09SJunchao Zhang   PetscCall(PetscObjectGetComm((PetscObject)B, &comm));
11310e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(ampi->A, &Adt));
11320e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(ampi->B, &Aot));
11330e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGetKokkosCsrMatrix(ampi->A, &Ad));
11340e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGetKokkosCsrMatrix(ampi->B, &Ao));
11350e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGetKokkosCsrMatrix(bmpi->A, &Bd));
11360e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGetKokkosCsrMatrix(bmpi->B, &Bo));
11370e3ece09SJunchao Zhang 
11380e3ece09SJunchao Zhang   // TODO: add command line options to select spgemm algorithms
11390e3ece09SJunchao Zhang   auto spgemm_alg = KokkosSparse::SPGEMMAlgorithm::SPGEMM_DEFAULT; // default is TPL if enabled, otherwise KK
11400e3ece09SJunchao Zhang 
11410e3ece09SJunchao Zhang   // CUDA-10.2's spgemm has bugs. We prefer the SpGEMMreuse APIs introduced in cuda-11.4
11420e3ece09SJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE)
11430e3ece09SJunchao Zhang   #if PETSC_PKG_CUDA_VERSION_LT(11, 4, 0)
11440e3ece09SJunchao Zhang   spgemm_alg = KokkosSparse::SPGEMMAlgorithm::SPGEMM_KK;
1145f0e6e2d1SJunchao Zhang   #endif
11460e3ece09SJunchao Zhang #endif
11470e3ece09SJunchao Zhang 
11480e3ece09SJunchao Zhang   PetscCallCXX(mm->kh1.create_spgemm_handle(spgemm_alg));
11490e3ece09SJunchao Zhang   PetscCallCXX(mm->kh2.create_spgemm_handle(spgemm_alg));
11500e3ece09SJunchao Zhang   PetscCallCXX(mm->kh3.create_spgemm_handle(spgemm_alg));
11510e3ece09SJunchao Zhang   PetscCallCXX(mm->kh4.create_spgemm_handle(spgemm_alg));
11520e3ece09SJunchao Zhang 
11530e3ece09SJunchao Zhang   // Aot * (B's diag + B's off-diag)
11540e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_symbolic(mm->kh3, Aot, false, Bd, false, mm->C3));
11550e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_symbolic(mm->kh4, Aot, false, Bo, false, mm->C4));
11560e3ece09SJunchao Zhang   // KK spgemm_symbolic() only populates the result's row map, but not its columns.
11570e3ece09SJunchao Zhang   // TODO: Remove the fake spgemm_numeric() after KK fixed this problem.
11580e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh3, Aot, false, Bd, false, mm->C3));
11590e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh4, Aot, false, Bo, false, mm->C4));
11600e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_LT(4, 0, 0)
11610e3ece09SJunchao Zhang   PetscCallCXX(sort_crs_matrix(mm->C3));
11620e3ece09SJunchao Zhang   PetscCallCXX(sort_crs_matrix(mm->C4));
11630e3ece09SJunchao Zhang #endif
11640e3ece09SJunchao Zhang 
11650e3ece09SJunchao Zhang   // Reduce E (i.e., C3 and C4)'s rows to form F, and overlap the communication
11660e3ece09SJunchao Zhang   PetscIntKokkosViewHost map_h("map_h", bmpi->B->cmap->n);
11670e3ece09SJunchao Zhang   PetscCall(MatGetOwnershipRangeColumn(B, &cstart, &cend));
11680e3ece09SJunchao Zhang   PetscCall(MatMPIAIJKokkosReduceBegin(comm, mm->C3, mm->C4, cstart, cend, bmpi->garray, ampi->Mvctx, MAT_INITIAL_MATRIX, map_h.data(), mm));
11690e3ece09SJunchao Zhang 
11700e3ece09SJunchao Zhang   // Adt * (B's diag + B's off-diag)
11710e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_symbolic(mm->kh1, Adt, false, Bd, false, mm->C1));
11720e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_symbolic(mm->kh2, Adt, false, Bo, false, mm->C2_mid));
11730e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh1, Adt, false, Bd, false, mm->C1));
11740e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh2, Adt, false, Bo, false, mm->C2_mid));
11750e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_LT(4, 0, 0)
11760e3ece09SJunchao Zhang   PetscCallCXX(sort_crs_matrix(mm->C1));
11770e3ece09SJunchao Zhang   PetscCallCXX(sort_crs_matrix(mm->C2_mid));
11780e3ece09SJunchao Zhang #endif
11790e3ece09SJunchao Zhang 
11800e3ece09SJunchao Zhang   PetscCall(MatMPIAIJKokkosReduceEnd(comm, mm->C3, mm->C4, cstart, cend, bmpi->garray, ampi->Mvctx, MAT_INITIAL_MATRIX, map_h.data(), mm));
11810e3ece09SJunchao Zhang 
11820e3ece09SJunchao Zhang   // Create C2, which shares a, i arrays with C2_mid, but with new column indices and potentially larger column size
11830e3ece09SJunchao Zhang   MatColIdxKokkosView oldj = mm->C2_mid.graph.entries, newj("j", oldj.extent(0));
11840e3ece09SJunchao Zhang   PetscIntKokkosView  map  = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), map_h);
11850e3ece09SJunchao Zhang   PetscCallCXX(Kokkos::parallel_for(
11860e3ece09SJunchao Zhang     oldj.extent(0), KOKKOS_LAMBDA(const PetscInt i) { newj(i) = map(oldj(i)); }));
11870e3ece09SJunchao Zhang   PetscCallCXX(mm->C2 = KokkosCsrMatrix("C2", mm->C2_mid.numRows(), mm->n /*new column size*/, mm->C2_mid.nnz(), mm->C2_mid.values, mm->C2_mid.graph.row_map, newj));
11880e3ece09SJunchao Zhang 
11890e3ece09SJunchao Zhang   // C = (C1+Fd, C2+Fo)
11900e3ece09SJunchao Zhang   PetscCallCXX(mm->kh1.create_spadd_handle(true)); // C1, Fd are sorted
11910e3ece09SJunchao Zhang   PetscCallCXX(mm->kh2.create_spadd_handle(true)); // C2, Fo are sorted
11920e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spadd_symbolic(&mm->kh1, mm->C1, mm->Fd, mm->Cd));
11930e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spadd_symbolic(&mm->kh2, mm->C2, mm->Fo, mm->Co));
11940e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spadd_numeric(&mm->kh1, 1.0, mm->C1, 1.0, mm->Fd, mm->Cd));
11950e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spadd_numeric(&mm->kh2, 1.0, mm->C2, 1.0, mm->Fo, mm->Co));
11960e3ece09SJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
11970e3ece09SJunchao Zhang }
11980e3ece09SJunchao Zhang 
11990e3ece09SJunchao Zhang static PetscErrorCode MatProductNumeric_MPIAIJKokkos_AtB(Mat_Product *product, Mat A, Mat B, MatMatStruct_AtB *mm)
12000e3ece09SJunchao Zhang {
12010e3ece09SJunchao Zhang   Mat_MPIAIJ     *ampi = static_cast<Mat_MPIAIJ *>(A->data);
12020e3ece09SJunchao Zhang   Mat_MPIAIJ     *bmpi = static_cast<Mat_MPIAIJ *>(B->data);
12030e3ece09SJunchao Zhang   KokkosCsrMatrix Adt, Aot, Bd, Bo;
12040e3ece09SJunchao Zhang   MPI_Comm        comm;
12050e3ece09SJunchao Zhang 
12060e3ece09SJunchao Zhang   PetscFunctionBegin;
12070e3ece09SJunchao Zhang   PetscCall(PetscObjectGetComm((PetscObject)B, &comm));
12080e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(ampi->A, &Adt));
12090e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(ampi->B, &Aot));
12100e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGetKokkosCsrMatrix(bmpi->A, &Bd));
12110e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGetKokkosCsrMatrix(bmpi->B, &Bo));
12120e3ece09SJunchao Zhang 
12130e3ece09SJunchao Zhang   // Aot * (B's diag + B's off-diag)
12140e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh3, Aot, false, Bd, false, mm->C3));
12150e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh4, Aot, false, Bo, false, mm->C4));
12160e3ece09SJunchao Zhang 
12170e3ece09SJunchao Zhang   // Reduce E (i.e., C3 and C4)'s rows to form F, and overlap the communication
12180e3ece09SJunchao Zhang   PetscCall(MatMPIAIJKokkosReduceBegin(comm, mm->C3, mm->C4, 0, 0, NULL, NULL, MAT_REUSE_MATRIX, NULL, mm));
12190e3ece09SJunchao Zhang 
12200e3ece09SJunchao Zhang   // Adt * (B's diag + B's off-diag)
12210e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh1, Adt, false, Bd, false, mm->C1));
12220e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh2, Adt, false, Bo, false, mm->C2_mid));
12230e3ece09SJunchao Zhang 
12240e3ece09SJunchao Zhang   PetscCall(MatMPIAIJKokkosReduceEnd(comm, mm->C3, mm->C4, 0, 0, NULL, NULL, MAT_REUSE_MATRIX, NULL, mm));
12250e3ece09SJunchao Zhang 
12260e3ece09SJunchao Zhang   // C = (C1+Fd, C2+Fo)
12270e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spadd_numeric(&mm->kh1, 1.0, mm->C1, 1.0, mm->Fd, mm->Cd));
12280e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spadd_numeric(&mm->kh2, 1.0, mm->C2, 1.0, mm->Fo, mm->Co));
12290e3ece09SJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
12300e3ece09SJunchao Zhang }
1231f0e6e2d1SJunchao Zhang 
1232076ba34aSJunchao Zhang /* MatProductSymbolic_MPIAIJKokkos_AB - AB flavor of MatProductSymbolic_MPIAIJKokkos
1233076ba34aSJunchao Zhang 
1234076ba34aSJunchao Zhang   Input Parameters:
1235076ba34aSJunchao Zhang +  product  - Mat_Product which carried out the computation. Passed in to access info about this mat product.
1236076ba34aSJunchao Zhang .  A        - an MPIAIJKOKKOS matrix
1237076ba34aSJunchao Zhang .  B        - an MPIAIJKOKKOS matrix
1238076ba34aSJunchao Zhang -  mm       - a struct used to stash intermediate data when computing AB. Persist from symbolic to numeric operations.
1239076ba34aSJunchao Zhang */
1240d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSymbolic_MPIAIJKokkos_AB(Mat_Product *product, Mat A, Mat B, MatMatStruct_AB *mm)
1241d71ae5a4SJacob Faibussowitsch {
12420e3ece09SJunchao Zhang   Mat_MPIAIJ     *ampi = static_cast<Mat_MPIAIJ *>(A->data);
12430e3ece09SJunchao Zhang   Mat_MPIAIJ     *bmpi = static_cast<Mat_MPIAIJ *>(B->data);
12440e3ece09SJunchao Zhang   KokkosCsrMatrix Ad, Ao, Bd, Bo;
1245076ba34aSJunchao Zhang 
1246076ba34aSJunchao Zhang   PetscFunctionBegin;
12470e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGetKokkosCsrMatrix(ampi->A, &Ad));
12480e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGetKokkosCsrMatrix(ampi->B, &Ao));
12490e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGetKokkosCsrMatrix(bmpi->A, &Bd));
12500e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGetKokkosCsrMatrix(bmpi->B, &Bo));
12510e3ece09SJunchao Zhang 
12520e3ece09SJunchao Zhang   // TODO: add command line options to select spgemm algorithms
12530e3ece09SJunchao Zhang   auto spgemm_alg = KokkosSparse::SPGEMMAlgorithm::SPGEMM_DEFAULT; // default is TPL if enabled, otherwise KK
12540e3ece09SJunchao Zhang 
12550e3ece09SJunchao Zhang   // CUDA-10.2's spgemm has bugs. We prefer the SpGEMMreuse APIs introduced in cuda-11.4
12560e3ece09SJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE)
12570e3ece09SJunchao Zhang   #if PETSC_PKG_CUDA_VERSION_LT(11, 4, 0)
12580e3ece09SJunchao Zhang   spgemm_alg = KokkosSparse::SPGEMMAlgorithm::SPGEMM_KK;
12590e3ece09SJunchao Zhang   #endif
1260f0e6e2d1SJunchao Zhang #endif
1261f0e6e2d1SJunchao Zhang 
12620e3ece09SJunchao Zhang   mm->kh1.create_spgemm_handle(spgemm_alg);
12630e3ece09SJunchao Zhang   mm->kh2.create_spgemm_handle(spgemm_alg);
12640e3ece09SJunchao Zhang   mm->kh3.create_spgemm_handle(spgemm_alg);
12650e3ece09SJunchao Zhang   mm->kh4.create_spgemm_handle(spgemm_alg);
1266076ba34aSJunchao Zhang 
12670e3ece09SJunchao Zhang   // Bcast B's rows to form F, and overlap the communication
12680e3ece09SJunchao Zhang   PetscIntKokkosViewHost map_h("map_h", bmpi->B->cmap->n);
12690e3ece09SJunchao Zhang   PetscCall(MatMPIAIJKokkosBcastBegin(B, ampi->Mvctx, MAT_INITIAL_MATRIX, map_h.data(), mm));
1270076ba34aSJunchao Zhang 
12710e3ece09SJunchao Zhang   // A's diag * (B's diag + B's off-diag)
12720e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_symbolic(mm->kh1, Ad, false, Bd, false, mm->C1));
12730e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_symbolic(mm->kh2, Ad, false, Bo, false, mm->C2_mid)); // C2 aliases with C2_mid, except with new column indices
12740e3ece09SJunchao Zhang   // KK spgemm_symbolic() only populates the result's row map, but not its columns.
12750e3ece09SJunchao Zhang   // TODO: Remove the fake spgemm_numeric() after KK fixed this problem.
12760e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh1, Ad, false, Bd, false, mm->C1));
12770e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh2, Ad, false, Bo, false, mm->C2_mid));
12780e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_LT(4, 0, 0)
12790e3ece09SJunchao Zhang   PetscCallCXX(sort_crs_matrix(mm->C1));
12800e3ece09SJunchao Zhang   PetscCallCXX(sort_crs_matrix(mm->C2_mid));
12810e3ece09SJunchao Zhang #endif
1282076ba34aSJunchao Zhang 
12830e3ece09SJunchao Zhang   PetscCall(MatMPIAIJKokkosBcastEnd(B, ampi->Mvctx, MAT_INITIAL_MATRIX, map_h.data(), mm));
1284076ba34aSJunchao Zhang 
12850e3ece09SJunchao Zhang   // A's off-diag * (F's diag + F's off-diag)
12860e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_symbolic(mm->kh3, Ao, false, mm->Fd, false, mm->C3));
12870e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh3, Ao, false, mm->Fd, false, mm->C3));
12880e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_symbolic(mm->kh4, Ao, false, mm->Fo, false, mm->C4));
12890e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh4, Ao, false, mm->Fo, false, mm->C4));
12900e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_LT(4, 0, 0)
12910e3ece09SJunchao Zhang   PetscCallCXX(sort_crs_matrix(mm->C3));
12920e3ece09SJunchao Zhang   PetscCallCXX(sort_crs_matrix(mm->C4));
12930e3ece09SJunchao Zhang #endif
1294076ba34aSJunchao Zhang 
12950e3ece09SJunchao Zhang   // Create C2, which shares a, i arrays with C2_mid, but with new column indices and potentially larger column size
12960e3ece09SJunchao Zhang   MatColIdxKokkosView oldj = mm->C2_mid.graph.entries, newj("j", oldj.extent(0));
12970e3ece09SJunchao Zhang   PetscIntKokkosView  map  = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), map_h);
12980e3ece09SJunchao Zhang   PetscCallCXX(Kokkos::parallel_for(
12990e3ece09SJunchao Zhang     oldj.extent(0), KOKKOS_LAMBDA(const PetscInt i) { newj(i) = map(oldj(i)); }));
13000e3ece09SJunchao Zhang   mm->C2 = KokkosCsrMatrix("C2", mm->C2_mid.numRows(), mm->n /*new column size*/, mm->C2_mid.nnz(), mm->C2_mid.values, mm->C2_mid.graph.row_map, newj);
13010e3ece09SJunchao Zhang 
13020e3ece09SJunchao Zhang   // C = (Cd, Co) = (C1+C3, C2+C4)
13030e3ece09SJunchao Zhang   mm->kh1.create_spadd_handle(true); // C1, C3 are sorted
13040e3ece09SJunchao Zhang   mm->kh2.create_spadd_handle(true); // C2, C4 are sorted
13050e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spadd_symbolic(&mm->kh1, mm->C1, mm->C3, mm->Cd));
13060e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spadd_symbolic(&mm->kh2, mm->C2, mm->C4, mm->Co));
13070e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spadd_numeric(&mm->kh1, 1.0, mm->C1, 1.0, mm->C3, mm->Cd));
13080e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spadd_numeric(&mm->kh2, 1.0, mm->C2, 1.0, mm->C4, mm->Co));
13093ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1310076ba34aSJunchao Zhang }
1311076ba34aSJunchao Zhang 
13120e3ece09SJunchao Zhang static PetscErrorCode MatProductNumeric_MPIAIJKokkos_AB(Mat_Product *product, Mat A, Mat B, MatMatStruct_AB *mm)
1313d71ae5a4SJacob Faibussowitsch {
13140e3ece09SJunchao Zhang   Mat_MPIAIJ     *ampi = static_cast<Mat_MPIAIJ *>(A->data);
13150e3ece09SJunchao Zhang   Mat_MPIAIJ     *bmpi = static_cast<Mat_MPIAIJ *>(B->data);
13160e3ece09SJunchao Zhang   KokkosCsrMatrix Ad, Ao, Bd, Bo;
1317076ba34aSJunchao Zhang 
1318076ba34aSJunchao Zhang   PetscFunctionBegin;
13190e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGetKokkosCsrMatrix(ampi->A, &Ad));
13200e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGetKokkosCsrMatrix(ampi->B, &Ao));
13210e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGetKokkosCsrMatrix(bmpi->A, &Bd));
13220e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosGetKokkosCsrMatrix(bmpi->B, &Bo));
1323076ba34aSJunchao Zhang 
13240e3ece09SJunchao Zhang   // Bcast B's rows to form F, and overlap the communication
13250e3ece09SJunchao Zhang   PetscCall(MatMPIAIJKokkosBcastBegin(B, NULL, MAT_REUSE_MATRIX, NULL, mm));
1326076ba34aSJunchao Zhang 
13270e3ece09SJunchao Zhang   // A's diag * (B's diag + B's off-diag)
13280e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh1, Ad, false, Bd, false, mm->C1));
13290e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh2, Ad, false, Bo, false, mm->C2_mid));
1330076ba34aSJunchao Zhang 
13310e3ece09SJunchao Zhang   PetscCall(MatMPIAIJKokkosBcastEnd(B, NULL, MAT_REUSE_MATRIX, NULL, mm));
1332076ba34aSJunchao Zhang 
13330e3ece09SJunchao Zhang   // A's off-diag * (F's diag + F's off-diag)
13340e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh3, Ao, false, mm->Fd, false, mm->C3));
13350e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(mm->kh4, Ao, false, mm->Fo, false, mm->C4));
13360e3ece09SJunchao Zhang 
13370e3ece09SJunchao Zhang   // C = (Cd, Co) = (C1+C3, C2+C4)
13380e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spadd_numeric(&mm->kh1, 1.0, mm->C1, 1.0, mm->C3, mm->Cd));
13390e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spadd_numeric(&mm->kh2, 1.0, mm->C2, 1.0, mm->C4, mm->Co));
13403ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1341076ba34aSJunchao Zhang }
1342076ba34aSJunchao Zhang 
1343d71ae5a4SJacob Faibussowitsch PetscErrorCode MatProductNumeric_MPIAIJKokkos(Mat C)
1344d71ae5a4SJacob Faibussowitsch {
13450e3ece09SJunchao Zhang   Mat_MPIAIJ                  *cmpi = static_cast<Mat_MPIAIJ *>(C->data);
13460e3ece09SJunchao Zhang   Mat_Product                 *product;
13470e3ece09SJunchao Zhang   MatProductData_MPIAIJKokkos *pdata;
1348076ba34aSJunchao Zhang   MatProductType               ptype;
13490e3ece09SJunchao Zhang   Mat                          A, B;
1350076ba34aSJunchao Zhang 
1351076ba34aSJunchao Zhang   PetscFunctionBegin;
13520e3ece09SJunchao Zhang   MatCheckProduct(C, 1); // make sure C is a product
13530e3ece09SJunchao Zhang   product = C->product;
13540e3ece09SJunchao Zhang   pdata   = static_cast<MatProductData_MPIAIJKokkos *>(product->data);
1355076ba34aSJunchao Zhang   ptype   = product->type;
1356076ba34aSJunchao Zhang   A       = product->A;
1357076ba34aSJunchao Zhang   B       = product->B;
1358076ba34aSJunchao Zhang 
13590e3ece09SJunchao Zhang   // See if numeric has already been done in symbolic (e.g., user calls MatMatMult(A,B,MAT_INITIAL_MATRIX,..,C)).
13600e3ece09SJunchao Zhang   // If yes, skip the numeric, but reset the flag so that next time when user calls MatMatMult(E,F,MAT_REUSE_MATRIX,..,C),
13610e3ece09SJunchao Zhang   // we still do numeric.
13620e3ece09SJunchao Zhang   if (pdata->reusesym) { // numeric reuses results from symbolic
13630e3ece09SJunchao Zhang     pdata->reusesym = PETSC_FALSE;
13643ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
1365076ba34aSJunchao Zhang   }
1366076ba34aSJunchao Zhang 
1367076ba34aSJunchao Zhang   if (ptype == MATPRODUCT_AB) {
13680e3ece09SJunchao Zhang     PetscCall(MatProductNumeric_MPIAIJKokkos_AB(product, A, B, pdata->mmAB));
1369076ba34aSJunchao Zhang   } else if (ptype == MATPRODUCT_AtB) {
13700e3ece09SJunchao Zhang     PetscCall(MatProductNumeric_MPIAIJKokkos_AtB(product, A, B, pdata->mmAtB));
13710e3ece09SJunchao Zhang   } else if (ptype == MATPRODUCT_PtAP) { // BtAB, computed by Z = AB; C= BtZ
13720e3ece09SJunchao Zhang     PetscCall(MatProductNumeric_MPIAIJKokkos_AB(product, A, B, pdata->mmAB));
13730e3ece09SJunchao Zhang     PetscCall(MatProductNumeric_MPIAIJKokkos_AtB(product, B, pdata->Z, pdata->mmAtB));
1374076ba34aSJunchao Zhang   }
13750e3ece09SJunchao Zhang 
13760e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosModifyDevice(cmpi->A)); // mark that A, B on device are modified
13770e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosModifyDevice(cmpi->B));
13783ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1379076ba34aSJunchao Zhang }
1380076ba34aSJunchao Zhang 
1381d71ae5a4SJacob Faibussowitsch PetscErrorCode MatProductSymbolic_MPIAIJKokkos(Mat C)
1382d71ae5a4SJacob Faibussowitsch {
1383076ba34aSJunchao Zhang   Mat                          A, B;
13840e3ece09SJunchao Zhang   Mat_Product                 *product;
1385076ba34aSJunchao Zhang   MatProductType               ptype;
13860e3ece09SJunchao Zhang   MatProductData_MPIAIJKokkos *pdata;
1387076ba34aSJunchao Zhang   MatMatStruct                *mm = NULL;
13880e3ece09SJunchao Zhang   PetscInt                     m, n, M, N;
13890e3ece09SJunchao Zhang   Mat                          Cd, Co;
13900e3ece09SJunchao Zhang   MPI_Comm                     comm;
1391076ba34aSJunchao Zhang 
1392076ba34aSJunchao Zhang   PetscFunctionBegin;
13930e3ece09SJunchao Zhang   PetscCall(PetscObjectGetComm((PetscObject)C, &comm));
1394076ba34aSJunchao Zhang   MatCheckProduct(C, 1);
13950e3ece09SJunchao Zhang   product = C->product;
13960e3ece09SJunchao Zhang   PetscCheck(!product->data, comm, PETSC_ERR_PLIB, "Product data not empty");
1397076ba34aSJunchao Zhang   ptype = product->type;
1398076ba34aSJunchao Zhang   A     = product->A;
1399076ba34aSJunchao Zhang   B     = product->B;
1400076ba34aSJunchao Zhang 
1401076ba34aSJunchao Zhang   switch (ptype) {
14029371c9d4SSatish Balay   case MATPRODUCT_AB:
14039371c9d4SSatish Balay     m = A->rmap->n;
14049371c9d4SSatish Balay     n = B->cmap->n;
14059371c9d4SSatish Balay     M = A->rmap->N;
14069371c9d4SSatish Balay     N = B->cmap->N;
14079371c9d4SSatish Balay     break;
14089371c9d4SSatish Balay   case MATPRODUCT_AtB:
14099371c9d4SSatish Balay     m = A->cmap->n;
14109371c9d4SSatish Balay     n = B->cmap->n;
14119371c9d4SSatish Balay     M = A->cmap->N;
14129371c9d4SSatish Balay     N = B->cmap->N;
14139371c9d4SSatish Balay     break;
14149371c9d4SSatish Balay   case MATPRODUCT_PtAP:
14159371c9d4SSatish Balay     m = B->cmap->n;
14169371c9d4SSatish Balay     n = B->cmap->n;
14179371c9d4SSatish Balay     M = B->cmap->N;
14189371c9d4SSatish Balay     N = B->cmap->N;
14199371c9d4SSatish Balay     break; /* BtAB */
1420d71ae5a4SJacob Faibussowitsch   default:
14210e3ece09SJunchao Zhang     SETERRQ(comm, PETSC_ERR_PLIB, "Not for product type %s", MatProductTypes[ptype]);
1422076ba34aSJunchao Zhang   }
1423076ba34aSJunchao Zhang 
14249566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C, m, n, M, N));
14259566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(C->rmap));
14269566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(C->cmap));
14279566063dSJacob Faibussowitsch   PetscCall(MatSetType(C, ((PetscObject)A)->type_name));
1428076ba34aSJunchao Zhang 
14290e3ece09SJunchao Zhang   pdata           = new MatProductData_MPIAIJKokkos();
14300e3ece09SJunchao Zhang   pdata->reusesym = product->api_user;
1431076ba34aSJunchao Zhang 
1432076ba34aSJunchao Zhang   if (ptype == MATPRODUCT_AB) {
14330e3ece09SJunchao Zhang     auto mmAB = new MatMatStruct_AB();
14340e3ece09SJunchao Zhang     PetscCall(MatProductSymbolic_MPIAIJKokkos_AB(product, A, B, mmAB));
14350e3ece09SJunchao Zhang     mm = pdata->mmAB = mmAB;
1436076ba34aSJunchao Zhang   } else if (ptype == MATPRODUCT_AtB) {
14370e3ece09SJunchao Zhang     auto mmAtB = new MatMatStruct_AtB();
14380e3ece09SJunchao Zhang     PetscCall(MatProductSymbolic_MPIAIJKokkos_AtB(product, A, B, mmAtB));
14390e3ece09SJunchao Zhang     mm = pdata->mmAtB = mmAtB;
14400e3ece09SJunchao Zhang   } else if (ptype == MATPRODUCT_PtAP) { // C = BtAB, computed as Z = AB; C= BtZ
14410e3ece09SJunchao Zhang     Mat Zd, Zo, Z;                       // Zd, Zo are owned by pdata->Z
14420e3ece09SJunchao Zhang 
14430e3ece09SJunchao Zhang     auto mmAB = new MatMatStruct_AB();
14440e3ece09SJunchao Zhang     PetscCall(MatProductSymbolic_MPIAIJKokkos_AB(product, A, B, mmAB)); // Z stored as mmAB->{Cd, Co}
14450e3ece09SJunchao Zhang     PetscCall(MatCreateSeqAIJKokkosWithKokkosCsrMatrix(PETSC_COMM_SELF, mmAB->Cd, &Zd));
14460e3ece09SJunchao Zhang     PetscCall(MatCreateSeqAIJKokkosWithKokkosCsrMatrix(PETSC_COMM_SELF, mmAB->Co, &Zo));
14470e3ece09SJunchao Zhang     pdata->mmAB = mmAB;
14480e3ece09SJunchao Zhang 
14490e3ece09SJunchao Zhang     m = A->rmap->n; // Z's layout
14500e3ece09SJunchao Zhang     n = B->cmap->n;
14510e3ece09SJunchao Zhang     M = A->rmap->N;
14520e3ece09SJunchao Zhang     N = B->cmap->N;
14530e3ece09SJunchao Zhang     PetscCall(MatCreate(comm, &Z));
14540e3ece09SJunchao Zhang     PetscCall(MatSetSizes(Z, m, n, M, N));
14550e3ece09SJunchao Zhang     PetscCall(PetscLayoutSetUp(Z->rmap));
14560e3ece09SJunchao Zhang     PetscCall(PetscLayoutSetUp(Z->cmap));
14570e3ece09SJunchao Zhang     PetscCall(MatSetType(Z, MATMPIAIJKOKKOS));
14580e3ece09SJunchao Zhang     PetscCall(MatSetMPIAIJKokkosWithSplitSeqAIJKokkosMatrices(Z, Zd, Zo, mmAB->garray));
14590e3ece09SJunchao Zhang 
14600e3ece09SJunchao Zhang     auto mmAtB = new MatMatStruct_AtB();
14610e3ece09SJunchao Zhang     PetscCall(MatProductSymbolic_MPIAIJKokkos_AtB(product, B, Z, mmAtB)); // final result C stored as mmAtB->{Cd, Co}
14620e3ece09SJunchao Zhang 
14630e3ece09SJunchao Zhang     pdata->Z = Z; // give ownership to pdata
14640e3ece09SJunchao Zhang     mm = pdata->mmAtB = mmAtB;
1465076ba34aSJunchao Zhang   }
14660e3ece09SJunchao Zhang 
14670e3ece09SJunchao Zhang   PetscCall(MatCreateSeqAIJKokkosWithKokkosCsrMatrix(PETSC_COMM_SELF, mm->Cd, &Cd));
14680e3ece09SJunchao Zhang   PetscCall(MatCreateSeqAIJKokkosWithKokkosCsrMatrix(PETSC_COMM_SELF, mm->Co, &Co));
14690e3ece09SJunchao Zhang   PetscCall(MatSetMPIAIJKokkosWithSplitSeqAIJKokkosMatrices(C, Cd, Co, mm->garray));
14700e3ece09SJunchao Zhang 
14710e3ece09SJunchao Zhang   C->product->data       = pdata;
1472076ba34aSJunchao Zhang   C->product->destroy    = MatProductDataDestroy_MPIAIJKokkos;
1473076ba34aSJunchao Zhang   C->ops->productnumeric = MatProductNumeric_MPIAIJKokkos;
14743ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1475076ba34aSJunchao Zhang }
1476076ba34aSJunchao Zhang 
1477d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatProductSetFromOptions_MPIAIJKokkos(Mat mat)
1478d71ae5a4SJacob Faibussowitsch {
1479076ba34aSJunchao Zhang   Mat_Product *product = mat->product;
1480076ba34aSJunchao Zhang   PetscBool    match   = PETSC_FALSE;
1481076ba34aSJunchao Zhang   PetscBool    usecpu  = PETSC_FALSE;
1482076ba34aSJunchao Zhang 
1483076ba34aSJunchao Zhang   PetscFunctionBegin;
1484076ba34aSJunchao Zhang   MatCheckProduct(mat, 1);
148548a46eb9SPierre Jolivet   if (!product->A->boundtocpu && !product->B->boundtocpu) PetscCall(PetscObjectTypeCompare((PetscObject)product->B, ((PetscObject)product->A)->type_name, &match));
1486076ba34aSJunchao Zhang   if (match) { /* we can always fallback to the CPU if requested */
1487076ba34aSJunchao Zhang     switch (product->type) {
1488076ba34aSJunchao Zhang     case MATPRODUCT_AB:
1489076ba34aSJunchao Zhang       if (product->api_user) {
1490d0609cedSBarry Smith         PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatMatMult", "Mat");
14919566063dSJacob Faibussowitsch         PetscCall(PetscOptionsBool("-matmatmult_backend_cpu", "Use CPU code", "MatMatMult", usecpu, &usecpu, NULL));
1492d0609cedSBarry Smith         PetscOptionsEnd();
1493076ba34aSJunchao Zhang       } else {
1494d0609cedSBarry Smith         PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatProduct_AB", "Mat");
14959566063dSJacob Faibussowitsch         PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu", "Use CPU code", "MatMatMult", usecpu, &usecpu, NULL));
1496d0609cedSBarry Smith         PetscOptionsEnd();
1497076ba34aSJunchao Zhang       }
1498076ba34aSJunchao Zhang       break;
1499076ba34aSJunchao Zhang     case MATPRODUCT_AtB:
1500076ba34aSJunchao Zhang       if (product->api_user) {
1501d0609cedSBarry Smith         PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatTransposeMatMult", "Mat");
15029566063dSJacob Faibussowitsch         PetscCall(PetscOptionsBool("-mattransposematmult_backend_cpu", "Use CPU code", "MatTransposeMatMult", usecpu, &usecpu, NULL));
1503d0609cedSBarry Smith         PetscOptionsEnd();
1504076ba34aSJunchao Zhang       } else {
1505d0609cedSBarry Smith         PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatProduct_AtB", "Mat");
15069566063dSJacob Faibussowitsch         PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu", "Use CPU code", "MatTransposeMatMult", usecpu, &usecpu, NULL));
1507d0609cedSBarry Smith         PetscOptionsEnd();
1508076ba34aSJunchao Zhang       }
1509076ba34aSJunchao Zhang       break;
1510076ba34aSJunchao Zhang     case MATPRODUCT_PtAP:
1511076ba34aSJunchao Zhang       if (product->api_user) {
1512d0609cedSBarry Smith         PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatPtAP", "Mat");
15139566063dSJacob Faibussowitsch         PetscCall(PetscOptionsBool("-matptap_backend_cpu", "Use CPU code", "MatPtAP", usecpu, &usecpu, NULL));
1514d0609cedSBarry Smith         PetscOptionsEnd();
1515076ba34aSJunchao Zhang       } else {
1516d0609cedSBarry Smith         PetscOptionsBegin(PetscObjectComm((PetscObject)mat), ((PetscObject)mat)->prefix, "MatProduct_PtAP", "Mat");
15179566063dSJacob Faibussowitsch         PetscCall(PetscOptionsBool("-mat_product_algorithm_backend_cpu", "Use CPU code", "MatPtAP", usecpu, &usecpu, NULL));
1518d0609cedSBarry Smith         PetscOptionsEnd();
1519076ba34aSJunchao Zhang       }
1520076ba34aSJunchao Zhang       break;
1521d71ae5a4SJacob Faibussowitsch     default:
1522d71ae5a4SJacob Faibussowitsch       break;
1523076ba34aSJunchao Zhang     }
1524076ba34aSJunchao Zhang     match = (PetscBool)!usecpu;
1525076ba34aSJunchao Zhang   }
1526076ba34aSJunchao Zhang   if (match) {
1527076ba34aSJunchao Zhang     switch (product->type) {
1528076ba34aSJunchao Zhang     case MATPRODUCT_AB:
1529076ba34aSJunchao Zhang     case MATPRODUCT_AtB:
1530d71ae5a4SJacob Faibussowitsch     case MATPRODUCT_PtAP:
1531d71ae5a4SJacob Faibussowitsch       mat->ops->productsymbolic = MatProductSymbolic_MPIAIJKokkos;
1532d71ae5a4SJacob Faibussowitsch       break;
1533d71ae5a4SJacob Faibussowitsch     default:
1534d71ae5a4SJacob Faibussowitsch       break;
1535076ba34aSJunchao Zhang     }
1536076ba34aSJunchao Zhang   }
1537076ba34aSJunchao Zhang   /* fallback to MPIAIJ ops */
153848a46eb9SPierre Jolivet   if (!mat->ops->productsymbolic) PetscCall(MatProductSetFromOptions_MPIAIJ(mat));
15393ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1540076ba34aSJunchao Zhang }
1541076ba34aSJunchao Zhang 
1542d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetPreallocationCOO_MPIAIJKokkos(Mat mat, PetscCount coo_n, PetscInt coo_i[], PetscInt coo_j[])
1543d71ae5a4SJacob Faibussowitsch {
1544394ed5ebSJunchao Zhang   Mat_MPIAIJ       *mpiaij = (Mat_MPIAIJ *)mat->data;
1545cbc6b225SStefano Zampini   Mat_MPIAIJKokkos *mpikok;
154642550becSJunchao Zhang 
154742550becSJunchao Zhang   PetscFunctionBegin;
154830203840SJunchao Zhang   PetscCall(MatSetPreallocationCOO_MPIAIJ(mat, coo_n, coo_i, coo_j)); /* mpiaij->A,B's type is set to seqaijkokkos */
1549cbc6b225SStefano Zampini   mat->preallocated = PETSC_TRUE;
15509566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(mat, MAT_FINAL_ASSEMBLY));
15519566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(mat, MAT_FINAL_ASSEMBLY));
15529566063dSJacob Faibussowitsch   PetscCall(MatZeroEntries(mat));
1553cbc6b225SStefano Zampini   mpikok = static_cast<Mat_MPIAIJKokkos *>(mpiaij->spptr);
1554cbc6b225SStefano Zampini   delete mpikok;
1555394ed5ebSJunchao Zhang   mpiaij->spptr = new Mat_MPIAIJKokkos(mpiaij);
15563ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
155742550becSJunchao Zhang }
155842550becSJunchao Zhang 
1559d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetValuesCOO_MPIAIJKokkos(Mat mat, const PetscScalar v[], InsertMode imode)
1560d71ae5a4SJacob Faibussowitsch {
1561394ed5ebSJunchao Zhang   Mat_MPIAIJ                 *mpiaij = static_cast<Mat_MPIAIJ *>(mat->data);
156242550becSJunchao Zhang   Mat_MPIAIJKokkos           *mpikok = static_cast<Mat_MPIAIJKokkos *>(mpiaij->spptr);
156342550becSJunchao Zhang   Mat                         A = mpiaij->A, B = mpiaij->B;
1564158ec288SJunchao Zhang   PetscCount                  Annz = mpiaij->Annz, Annz2 = mpiaij->Annz2, Bnnz = mpiaij->Bnnz, Bnnz2 = mpiaij->Bnnz2;
156542550becSJunchao Zhang   MatScalarKokkosView         Aa, Ba;
1566394ed5ebSJunchao Zhang   MatScalarKokkosView         v1;
156742550becSJunchao Zhang   MatScalarKokkosView        &vsend  = mpikok->sendbuf_d;
156842550becSJunchao Zhang   const MatScalarKokkosView  &v2     = mpikok->recvbuf_d;
1569158ec288SJunchao Zhang   const PetscCountKokkosView &Ajmap1 = mpikok->Ajmap1_d, Ajmap2 = mpikok->Ajmap2_d, Aimap2 = mpikok->Aimap2_d;
1570158ec288SJunchao Zhang   const PetscCountKokkosView &Bjmap1 = mpikok->Bjmap1_d, Bjmap2 = mpikok->Bjmap2_d, Bimap2 = mpikok->Bimap2_d;
1571394ed5ebSJunchao Zhang   const PetscCountKokkosView &Aperm1 = mpikok->Aperm1_d, Aperm2 = mpikok->Aperm2_d, Bperm1 = mpikok->Bperm1_d, Bperm2 = mpikok->Bperm2_d;
1572394ed5ebSJunchao Zhang   const PetscCountKokkosView &Cperm1 = mpikok->Cperm1_d;
157342550becSJunchao Zhang   PetscMemType                memtype;
157442550becSJunchao Zhang 
157542550becSJunchao Zhang   PetscFunctionBegin;
15769566063dSJacob Faibussowitsch   PetscCall(PetscGetMemType(v, &memtype)); /* Return PETSC_MEMTYPE_HOST when v is NULL */
157742550becSJunchao Zhang   if (PetscMemTypeHost(memtype)) {         /* If user gave v[] in host, we need to copy it to device if any */
1578394ed5ebSJunchao Zhang     v1 = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), MatScalarKokkosViewHost((PetscScalar *)v, mpiaij->coo_n));
157942550becSJunchao Zhang   } else {
1580394ed5ebSJunchao Zhang     v1 = MatScalarKokkosView((PetscScalar *)v, mpiaij->coo_n); /* Directly use v[]'s memory */
158142550becSJunchao Zhang   }
158242550becSJunchao Zhang 
158342550becSJunchao Zhang   if (imode == INSERT_VALUES) {
15849566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJGetKokkosViewWrite(A, &Aa)); /* write matrix values */
15859566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJGetKokkosViewWrite(B, &Ba));
1586394ed5ebSJunchao Zhang   } else {
15879566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJGetKokkosView(A, &Aa)); /* read & write matrix values */
15889566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJGetKokkosView(B, &Ba));
158942550becSJunchao Zhang   }
159042550becSJunchao Zhang 
159142550becSJunchao Zhang   /* Pack entries to be sent to remote */
15929371c9d4SSatish Balay   Kokkos::parallel_for(
15939371c9d4SSatish Balay     vsend.extent(0), KOKKOS_LAMBDA(const PetscCount i) { vsend(i) = v1(Cperm1(i)); });
159442550becSJunchao Zhang 
159542550becSJunchao Zhang   /* Send remote entries to their owner and overlap the communication with local computation */
15969566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceWithMemTypeBegin(mpiaij->coo_sf, MPIU_SCALAR, PETSC_MEMTYPE_KOKKOS, vsend.data(), PETSC_MEMTYPE_KOKKOS, v2.data(), MPI_REPLACE));
1597158ec288SJunchao Zhang   /* Add local entries to A and B in one kernel */
15989371c9d4SSatish Balay   Kokkos::parallel_for(
15999371c9d4SSatish Balay     Annz + Bnnz, KOKKOS_LAMBDA(PetscCount i) {
1600158ec288SJunchao Zhang       PetscScalar sum = 0.0;
1601158ec288SJunchao Zhang       if (i < Annz) {
1602158ec288SJunchao Zhang         for (PetscCount k = Ajmap1(i); k < Ajmap1(i + 1); k++) sum += v1(Aperm1(k));
1603ac38520cSJunchao Zhang         Aa(i) = (imode == INSERT_VALUES ? 0.0 : Aa(i)) + sum;
1604158ec288SJunchao Zhang       } else {
1605158ec288SJunchao Zhang         i -= Annz;
1606158ec288SJunchao Zhang         for (PetscCount k = Bjmap1(i); k < Bjmap1(i + 1); k++) sum += v1(Bperm1(k));
1607ac38520cSJunchao Zhang         Ba(i) = (imode == INSERT_VALUES ? 0.0 : Ba(i)) + sum;
1608158ec288SJunchao Zhang       }
1609158ec288SJunchao Zhang     });
16109566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceEnd(mpiaij->coo_sf, MPIU_SCALAR, vsend.data(), v2.data(), MPI_REPLACE));
161142550becSJunchao Zhang 
1612158ec288SJunchao Zhang   /* Add received remote entries to A and B in one kernel */
16139371c9d4SSatish Balay   Kokkos::parallel_for(
16149371c9d4SSatish Balay     Annz2 + Bnnz2, KOKKOS_LAMBDA(PetscCount i) {
1615158ec288SJunchao Zhang       if (i < Annz2) {
1616158ec288SJunchao Zhang         for (PetscCount k = Ajmap2(i); k < Ajmap2(i + 1); k++) Aa(Aimap2(i)) += v2(Aperm2(k));
1617158ec288SJunchao Zhang       } else {
1618158ec288SJunchao Zhang         i -= Annz2;
1619158ec288SJunchao Zhang         for (PetscCount k = Bjmap2(i); k < Bjmap2(i + 1); k++) Ba(Bimap2(i)) += v2(Bperm2(k));
1620158ec288SJunchao Zhang       }
1621158ec288SJunchao Zhang     });
162242550becSJunchao Zhang 
1623394ed5ebSJunchao Zhang   if (imode == INSERT_VALUES) {
16249566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJRestoreKokkosViewWrite(A, &Aa)); /* Increase A & B's state etc. */
16259566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJRestoreKokkosViewWrite(B, &Ba));
1626394ed5ebSJunchao Zhang   } else {
16279566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJRestoreKokkosView(A, &Aa));
16289566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJRestoreKokkosView(B, &Ba));
1629394ed5ebSJunchao Zhang   }
16303ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
163142550becSJunchao Zhang }
163242550becSJunchao Zhang 
1633d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDestroy_MPIAIJKokkos(Mat A)
1634d71ae5a4SJacob Faibussowitsch {
163542550becSJunchao Zhang   Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ *)A->data;
1636076ba34aSJunchao Zhang 
1637076ba34aSJunchao Zhang   PetscFunctionBegin;
16389566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMPIAIJSetPreallocation_C", NULL));
16399566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatMPIAIJGetLocalMatMerge_C", NULL));
16409566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetPreallocationCOO_C", NULL));
16419566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetValuesCOO_C", NULL));
164242550becSJunchao Zhang   delete (Mat_MPIAIJKokkos *)mpiaij->spptr;
16439566063dSJacob Faibussowitsch   PetscCall(MatDestroy_MPIAIJ(A));
16443ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1645076ba34aSJunchao Zhang }
1646076ba34aSJunchao Zhang 
1647d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIAIJKokkos(Mat A, MatType mtype, MatReuse reuse, Mat *newmat)
1648d71ae5a4SJacob Faibussowitsch {
16498c3ff71bSJunchao Zhang   Mat         B;
1650076ba34aSJunchao Zhang   Mat_MPIAIJ *a;
16518c3ff71bSJunchao Zhang 
16528c3ff71bSJunchao Zhang   PetscFunctionBegin;
16538c3ff71bSJunchao Zhang   if (reuse == MAT_INITIAL_MATRIX) {
16549566063dSJacob Faibussowitsch     PetscCall(MatDuplicate(A, MAT_COPY_VALUES, newmat));
16558c3ff71bSJunchao Zhang   } else if (reuse == MAT_REUSE_MATRIX) {
16569566063dSJacob Faibussowitsch     PetscCall(MatCopy(A, *newmat, SAME_NONZERO_PATTERN));
16578c3ff71bSJunchao Zhang   }
16588c3ff71bSJunchao Zhang   B = *newmat;
16598c3ff71bSJunchao Zhang 
16606f3d89d0SStefano Zampini   B->boundtocpu = PETSC_FALSE;
16619566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->defaultvectype));
16629566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(VECKOKKOS, &B->defaultvectype));
16639566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)B, MATMPIAIJKOKKOS));
16648c3ff71bSJunchao Zhang 
1665076ba34aSJunchao Zhang   a = static_cast<Mat_MPIAIJ *>(A->data);
16669566063dSJacob Faibussowitsch   if (a->A) PetscCall(MatSetType(a->A, MATSEQAIJKOKKOS));
16679566063dSJacob Faibussowitsch   if (a->B) PetscCall(MatSetType(a->B, MATSEQAIJKOKKOS));
16689566063dSJacob Faibussowitsch   if (a->lvec) PetscCall(VecSetType(a->lvec, VECSEQKOKKOS));
1669076ba34aSJunchao Zhang 
16708c3ff71bSJunchao Zhang   B->ops->assemblyend           = MatAssemblyEnd_MPIAIJKokkos;
16718c3ff71bSJunchao Zhang   B->ops->mult                  = MatMult_MPIAIJKokkos;
16728c3ff71bSJunchao Zhang   B->ops->multadd               = MatMultAdd_MPIAIJKokkos;
16738c3ff71bSJunchao Zhang   B->ops->multtranspose         = MatMultTranspose_MPIAIJKokkos;
1674076ba34aSJunchao Zhang   B->ops->productsetfromoptions = MatProductSetFromOptions_MPIAIJKokkos;
1675076ba34aSJunchao Zhang   B->ops->destroy               = MatDestroy_MPIAIJKokkos;
16768c3ff71bSJunchao Zhang 
16779566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatMPIAIJSetPreallocation_C", MatMPIAIJSetPreallocation_MPIAIJKokkos));
16789566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatMPIAIJGetLocalMatMerge_C", MatMPIAIJGetLocalMatMerge_MPIAIJKokkos));
16799566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatSetPreallocationCOO_C", MatSetPreallocationCOO_MPIAIJKokkos));
16809566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatSetValuesCOO_C", MatSetValuesCOO_MPIAIJKokkos));
16813ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
16828c3ff71bSJunchao Zhang }
16833f3ba80aSJunchao Zhang /*MC
168411a5261eSBarry Smith    MATAIJKOKKOS - "mpiaijkokkos", a matrix type to be used for CSR sparse matrices with Kokkos
16858c3ff71bSJunchao Zhang 
16863f3ba80aSJunchao Zhang    A matrix type type using Kokkos-Kernels CrsMatrix type for portability across different device types
16873f3ba80aSJunchao Zhang 
16882ef1f0ffSBarry Smith    Options Database Key:
16892ef1f0ffSBarry Smith .  -mat_type aijkokkos - sets the matrix type to `MATAIJKOKKOS`
16903f3ba80aSJunchao Zhang 
16913f3ba80aSJunchao Zhang   Level: beginner
16923f3ba80aSJunchao Zhang 
16932ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MatCreateAIJKokkos()`, `MATSEQAIJKOKKOS`, `MATSEQAIJ`, `MATMPIAIJ`
16943f3ba80aSJunchao Zhang M*/
1695d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatCreate_MPIAIJKokkos(Mat A)
1696d71ae5a4SJacob Faibussowitsch {
16978c3ff71bSJunchao Zhang   PetscFunctionBegin;
16989566063dSJacob Faibussowitsch   PetscCall(PetscKokkosInitializeCheck());
16999566063dSJacob Faibussowitsch   PetscCall(MatCreate_MPIAIJ(A));
17009566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIAIJ_MPIAIJKokkos(A, MATMPIAIJKOKKOS, MAT_INPLACE_MATRIX, &A));
17013ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
17028c3ff71bSJunchao Zhang }
17038c3ff71bSJunchao Zhang 
17048c3ff71bSJunchao Zhang /*@C
170511a5261eSBarry Smith    MatCreateAIJKokkos - Creates a sparse matrix in `MATAIJKOKOS` (compressed row) format
17068c3ff71bSJunchao Zhang    (the default parallel PETSc format).  This matrix will ultimately pushed down
170720f4b53cSBarry Smith    to Kokkos for calculations.
17088c3ff71bSJunchao Zhang 
17098c3ff71bSJunchao Zhang    Collective
17108c3ff71bSJunchao Zhang 
17118c3ff71bSJunchao Zhang    Input Parameters:
171211a5261eSBarry Smith +  comm - MPI communicator, set to `PETSC_COMM_SELF`
171320f4b53cSBarry Smith .  m - number of local rows (or `PETSC_DECIDE` to have calculated if `M` is given)
171420f4b53cSBarry Smith            This value should be the same as the local size used in creating the
171520f4b53cSBarry Smith            y vector for the matrix-vector product y = Ax.
171620f4b53cSBarry Smith .  n - This value should be the same as the local size used in creating the
171720f4b53cSBarry Smith        x vector for the matrix-vector product y = Ax. (or `PETSC_DECIDE` to have
171820f4b53cSBarry Smith        calculated if N is given) For square matrices n is almost always `m`.
171920f4b53cSBarry Smith .  M - number of global rows (or `PETSC_DETERMINE` to have calculated if `m` is given)
172020f4b53cSBarry Smith .  N - number of global columns (or `PETSC_DETERMINE` to have calculated if `n` is given)
172120f4b53cSBarry Smith .  d_nz  - number of nonzeros per row in DIAGONAL portion of local submatrix
172220f4b53cSBarry Smith            (same value is used for all local rows)
172320f4b53cSBarry Smith .  d_nnz - array containing the number of nonzeros in the various rows of the
172420f4b53cSBarry Smith            DIAGONAL portion of the local submatrix (possibly different for each row)
172520f4b53cSBarry Smith            or `NULL`, if `d_nz` is used to specify the nonzero structure.
172620f4b53cSBarry Smith            The size of this array is equal to the number of local rows, i.e `m`.
172720f4b53cSBarry Smith            For matrices you plan to factor you must leave room for the diagonal entry and
172820f4b53cSBarry Smith            put in the entry even if it is zero.
172920f4b53cSBarry Smith .  o_nz  - number of nonzeros per row in the OFF-DIAGONAL portion of local
173020f4b53cSBarry Smith            submatrix (same value is used for all local rows).
173120f4b53cSBarry Smith -  o_nnz - array containing the number of nonzeros in the various rows of the
173220f4b53cSBarry Smith            OFF-DIAGONAL portion of the local submatrix (possibly different for
173320f4b53cSBarry Smith            each row) or `NULL`, if `o_nz` is used to specify the nonzero
173420f4b53cSBarry Smith            structure. The size of this array is equal to the number
173520f4b53cSBarry Smith            of local rows, i.e `m`.
17368c3ff71bSJunchao Zhang 
17378c3ff71bSJunchao Zhang    Output Parameter:
17388c3ff71bSJunchao Zhang .  A - the matrix
17398c3ff71bSJunchao Zhang 
17402ef1f0ffSBarry Smith    Level: intermediate
17412ef1f0ffSBarry Smith 
17422ef1f0ffSBarry Smith    Notes:
174311a5261eSBarry Smith    It is recommended that one use the `MatCreate()`, `MatSetType()` and/or `MatSetFromOptions()`,
17448c3ff71bSJunchao Zhang    MatXXXXSetPreallocation() paradigm instead of this routine directly.
174511a5261eSBarry Smith    [MatXXXXSetPreallocation() is, for example, `MatSeqAIJSetPreallocation()`]
17468c3ff71bSJunchao Zhang 
1747667f096bSBarry Smith    The AIJ format, also called compressed row storage), is fully compatible with standard Fortran
17488c3ff71bSJunchao Zhang    storage.  That is, the stored row and column indices can begin at
17492ef1f0ffSBarry Smith    either one (as in Fortran) or zero.
17508c3ff71bSJunchao Zhang 
17512ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MATAIJKOKOS`, `MATSEQAIJKOKOS`, `MATMPIAIJKOKOS`, `MatCreate()`, `MatCreateAIJ()`, `MatSetValues()`,
17522ef1f0ffSBarry Smith           `MatSeqAIJSetColumnIndices()`, `MatCreateSeqAIJWithArrays()`, `MatCreateAIJ()`, `MATMPIAIJKOKKOS`, `MATAIJKOKKOS`
17538c3ff71bSJunchao Zhang @*/
1754d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateAIJKokkos(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscInt d_nz, const PetscInt d_nnz[], PetscInt o_nz, const PetscInt o_nnz[], Mat *A)
1755d71ae5a4SJacob Faibussowitsch {
17568c3ff71bSJunchao Zhang   PetscMPIInt size;
17578c3ff71bSJunchao Zhang 
17588c3ff71bSJunchao Zhang   PetscFunctionBegin;
17599566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm, A));
17609566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*A, m, n, M, N));
17619566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm, &size));
17628c3ff71bSJunchao Zhang   if (size > 1) {
17639566063dSJacob Faibussowitsch     PetscCall(MatSetType(*A, MATMPIAIJKOKKOS));
17649566063dSJacob Faibussowitsch     PetscCall(MatMPIAIJSetPreallocation(*A, d_nz, d_nnz, o_nz, o_nnz));
17658c3ff71bSJunchao Zhang   } else {
17669566063dSJacob Faibussowitsch     PetscCall(MatSetType(*A, MATSEQAIJKOKKOS));
17679566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJSetPreallocation(*A, d_nz, d_nnz));
17688c3ff71bSJunchao Zhang   }
17693ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
17708c3ff71bSJunchao Zhang }
17718c3ff71bSJunchao Zhang 
1772a587d139SMark // get GPU pointer to stripped down Mat. For both Seq and MPI Mat.
1773d71ae5a4SJacob Faibussowitsch PetscErrorCode MatKokkosGetDeviceMatWrite(Mat A, PetscSplitCSRDataStructure *B)
1774d71ae5a4SJacob Faibussowitsch {
1775a587d139SMark   PetscMPIInt                size, rank;
1776a587d139SMark   MPI_Comm                   comm;
1777042217e8SBarry Smith   PetscSplitCSRDataStructure d_mat = NULL;
1778a587d139SMark 
1779a587d139SMark   PetscFunctionBegin;
17809566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A, &comm));
17819566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm, &size));
17829566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_rank(comm, &rank));
1783a587d139SMark   if (size == 1) {
17849566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGetDeviceMat(A, &d_mat));
17859566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosModifyDevice(A)); /* Since we are going to modify matrix values on device */
1786a587d139SMark   } else {
1787a587d139SMark     Mat_MPIAIJ *aij = (Mat_MPIAIJ *)A->data;
17889566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGetDeviceMat(aij->A, &d_mat));
17899566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosModifyDevice(aij->A));
17909566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosModifyDevice(aij->B));
17912c71b3e2SJacob Faibussowitsch     PetscCheck(A->nooffprocentries || aij->donotstash, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Device assembly does not currently support offproc values insertion. Use MatSetOption(A,MAT_NO_OFF_PROC_ENTRIES,PETSC_TRUE) or MatSetOption(A,MAT_IGNORE_OFF_PROC_ENTRIES,PETSC_TRUE)");
1792a587d139SMark   }
1793a587d139SMark   // act like MatSetValues because not called on host
1794a587d139SMark   if (A->assembled) {
179548a46eb9SPierre Jolivet     if (A->was_assembled) PetscCall(PetscInfo(A, "Assemble more than once already\n"));
1796a587d139SMark     A->was_assembled = PETSC_TRUE; // this is done (lazy) in MatAssemble but we are not calling it anymore - done in AIJ AssemblyEnd, need here?
1797a587d139SMark   } else {
17989566063dSJacob Faibussowitsch     PetscCall(PetscInfo(A, "Warning !assemble ??? assembled=%" PetscInt_FMT "\n", A->assembled));
1799a587d139SMark   }
1800a587d139SMark   if (!d_mat) {
1801042217e8SBarry Smith     struct _n_SplitCSRMat h_mat; /* host container */
1802a587d139SMark     Mat_SeqAIJKokkos     *aijkokA;
1803a587d139SMark     Mat_SeqAIJ           *jaca;
1804a587d139SMark     PetscInt              n = A->rmap->n, nnz;
1805a587d139SMark     Mat                   Amat;
1806042217e8SBarry Smith     PetscInt             *colmap;
1807042217e8SBarry Smith 
1808042217e8SBarry Smith     /* create and copy h_mat */
180949b994a9SMark Adams     h_mat.M = A->cmap->N; // use for debug build
18109566063dSJacob Faibussowitsch     PetscCall(PetscInfo(A, "Create device matrix in Kokkos\n"));
1811a587d139SMark     if (size == 1) {
1812a587d139SMark       Amat            = A;
1813a587d139SMark       jaca            = (Mat_SeqAIJ *)A->data;
18149371c9d4SSatish Balay       h_mat.rstart    = 0;
18159371c9d4SSatish Balay       h_mat.rend      = A->rmap->n;
18169371c9d4SSatish Balay       h_mat.cstart    = 0;
18179371c9d4SSatish Balay       h_mat.cend      = A->cmap->n;
1818a587d139SMark       h_mat.offdiag.i = h_mat.offdiag.j = NULL;
1819a587d139SMark       h_mat.offdiag.a                   = NULL;
1820a587d139SMark       aijkokA                           = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
1821a587d139SMark     } else {
1822a587d139SMark       Mat_MPIAIJ       *aij  = (Mat_MPIAIJ *)A->data;
1823a587d139SMark       Mat_SeqAIJ       *jacb = (Mat_SeqAIJ *)aij->B->data;
1824a587d139SMark       PetscInt          ii;
1825a587d139SMark       Mat_SeqAIJKokkos *aijkokB;
1826042217e8SBarry Smith 
1827a587d139SMark       Amat    = aij->A;
1828a587d139SMark       aijkokA = static_cast<Mat_SeqAIJKokkos *>(aij->A->spptr);
1829a587d139SMark       aijkokB = static_cast<Mat_SeqAIJKokkos *>(aij->B->spptr);
1830a587d139SMark       jaca    = (Mat_SeqAIJ *)aij->A->data;
183108401ef6SPierre Jolivet       PetscCheck(!aij->B->cmap->n || aij->garray, comm, PETSC_ERR_PLIB, "MPIAIJ Matrix was assembled but is missing garray");
183208401ef6SPierre Jolivet       PetscCheck(aij->B->rmap->n == aij->A->rmap->n, comm, PETSC_ERR_SUP, "Only support aij->B->rmap->n == aij->A->rmap->n");
1833a587d139SMark       aij->donotstash          = PETSC_TRUE;
1834a587d139SMark       aij->A->nooffprocentries = aij->B->nooffprocentries = A->nooffprocentries = PETSC_TRUE;
1835a5b23f4aSJose E. Roman       jaca->nonew = jacb->nonew = PETSC_TRUE; // no more disassembly
18369566063dSJacob Faibussowitsch       PetscCall(PetscCalloc1(A->cmap->N, &colmap));
1837042217e8SBarry Smith       for (ii = 0; ii < aij->B->cmap->n; ii++) colmap[aij->garray[ii]] = ii + 1;
1838a587d139SMark       // allocate B copy data
18399371c9d4SSatish Balay       h_mat.rstart = A->rmap->rstart;
18409371c9d4SSatish Balay       h_mat.rend   = A->rmap->rend;
18419371c9d4SSatish Balay       h_mat.cstart = A->cmap->rstart;
18429371c9d4SSatish Balay       h_mat.cend   = A->cmap->rend;
1843a587d139SMark       nnz          = jacb->i[n];
1844a587d139SMark       if (jacb->compressedrow.use) {
1845a587d139SMark         const Kokkos::View<PetscInt *, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_i_k(jacb->i, n + 1);
1846300d22a6SJunchao Zhang         aijkokB->i_uncompressed_d = Kokkos::View<PetscInt *>(Kokkos::create_mirror(DefaultMemorySpace(), h_i_k));
1847300d22a6SJunchao Zhang         Kokkos::deep_copy(aijkokB->i_uncompressed_d, h_i_k);
1848300d22a6SJunchao Zhang         h_mat.offdiag.i = aijkokB->i_uncompressed_d.data();
1849a587d139SMark       } else {
185099551766SMark Adams         h_mat.offdiag.i = aijkokB->i_device_data();
1851a587d139SMark       }
185299551766SMark Adams       h_mat.offdiag.j = aijkokB->j_device_data();
1853076ba34aSJunchao Zhang       h_mat.offdiag.a = aijkokB->a_device_data();
1854a587d139SMark       {
1855042217e8SBarry Smith         Kokkos::View<PetscInt *, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_colmap_k(colmap, A->cmap->N);
1856300d22a6SJunchao Zhang         aijkokB->colmap_d = Kokkos::View<PetscInt *>(Kokkos::create_mirror(DefaultMemorySpace(), h_colmap_k));
1857300d22a6SJunchao Zhang         Kokkos::deep_copy(aijkokB->colmap_d, h_colmap_k);
1858300d22a6SJunchao Zhang         h_mat.colmap = aijkokB->colmap_d.data();
18599566063dSJacob Faibussowitsch         PetscCall(PetscFree(colmap));
1860a587d139SMark       }
1861a587d139SMark       h_mat.offdiag.ignorezeroentries = jacb->ignorezeroentries;
1862a587d139SMark       h_mat.offdiag.n                 = n;
1863a587d139SMark     }
1864a587d139SMark     // allocate A copy data
1865a587d139SMark     nnz                          = jaca->i[n];
1866a587d139SMark     h_mat.diag.n                 = n;
1867a587d139SMark     h_mat.diag.ignorezeroentries = jaca->ignorezeroentries;
18689566063dSJacob Faibussowitsch     PetscCallMPI(MPI_Comm_rank(comm, &h_mat.rank));
1869d5b43468SJose E. Roman     PetscCheck(!jaca->compressedrow.use, PETSC_COMM_SELF, PETSC_ERR_PLIB, "A does not support compressed row (todo)");
187099551766SMark Adams     h_mat.diag.i = aijkokA->i_device_data();
187199551766SMark Adams     h_mat.diag.j = aijkokA->j_device_data();
1872076ba34aSJunchao Zhang     h_mat.diag.a = aijkokA->a_device_data();
1873da81f932SPierre Jolivet     // copy pointers and metadata to device
18749566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosSetDeviceMat(Amat, &h_mat));
18759566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGetDeviceMat(Amat, &d_mat));
18769566063dSJacob Faibussowitsch     PetscCall(PetscInfo(A, "Create device Mat n=%" PetscInt_FMT " nnz=%" PetscInt_FMT "\n", h_mat.diag.n, nnz));
1877a587d139SMark   }
1878a587d139SMark   *B           = d_mat;       // return it, set it in Mat, and set it up
1879a587d139SMark   A->assembled = PETSC_FALSE; // ready to write with matsetvalues - this done (lazy) in normal MatSetValues
18803ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1881a587d139SMark }
1882076ba34aSJunchao Zhang 
1883d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatSeqAIJKokkosGetOffloadMask(Mat A, const char **mask)
1884d71ae5a4SJacob Faibussowitsch {
1885076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
1886076ba34aSJunchao Zhang 
1887076ba34aSJunchao Zhang   PetscFunctionBegin;
1888076ba34aSJunchao Zhang   if (!aijkok) *mask = "AIJKOK_UNALLOCATED";
1889076ba34aSJunchao Zhang   else if (aijkok->a_dual.need_sync_host()) *mask = "PETSC_OFFLOAD_GPU";
1890076ba34aSJunchao Zhang   else if (aijkok->a_dual.need_sync_device()) *mask = "PETSC_OFFLOAD_CPU";
1891076ba34aSJunchao Zhang   else *mask = "PETSC_OFFLOAD_BOTH";
18923ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1893076ba34aSJunchao Zhang }
1894076ba34aSJunchao Zhang 
1895d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatAIJKokkosPrintOffloadMask(Mat A)
1896d71ae5a4SJacob Faibussowitsch {
1897076ba34aSJunchao Zhang   PetscMPIInt size;
1898076ba34aSJunchao Zhang   Mat         Ad, Ao;
1899076ba34aSJunchao Zhang   const char *amask, *bmask;
1900076ba34aSJunchao Zhang 
1901076ba34aSJunchao Zhang   PetscFunctionBegin;
19029566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size));
1903076ba34aSJunchao Zhang 
1904076ba34aSJunchao Zhang   if (size == 1) {
19059566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGetOffloadMask(A, &amask));
19069566063dSJacob Faibussowitsch     PetscCall(PetscPrintf(PETSC_COMM_SELF, "%s\n", amask));
1907076ba34aSJunchao Zhang   } else {
1908076ba34aSJunchao Zhang     Ad = ((Mat_MPIAIJ *)A->data)->A;
1909076ba34aSJunchao Zhang     Ao = ((Mat_MPIAIJ *)A->data)->B;
19109566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGetOffloadMask(Ad, &amask));
19119566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGetOffloadMask(Ao, &bmask));
19129566063dSJacob Faibussowitsch     PetscCall(PetscPrintf(PETSC_COMM_SELF, "Diag : Off-diag = %s : %s\n", amask, bmask));
1913076ba34aSJunchao Zhang   }
19143ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1915076ba34aSJunchao Zhang }
1916