xref: /petsc/src/mat/impls/aij/mpi/mpiaij.c (revision 2ee70a8848b18b2f3cd994db03b82f0ad4f3bf6e)
1cb512458SBarry Smith #ifndef lint
2*2ee70a88SLois Curfman McInnes static char vcid[] = "$Id: mpiaij.c,v 1.24 1995/04/02 16:35:07 curfman Exp $";
3cb512458SBarry Smith #endif
48a729477SBarry Smith 
51eb62cbbSBarry Smith #include "mpiaij.h"
68a729477SBarry Smith #include "vec/vecimpl.h"
7d6dfbf8fSBarry Smith #include "inline/spops.h"
88a729477SBarry Smith 
91eb62cbbSBarry Smith #define CHUNCKSIZE   100
101eb62cbbSBarry Smith /*
111eb62cbbSBarry Smith    This is a simple minded stash. Do a linear search to determine if
121eb62cbbSBarry Smith  in stash, if not add to end.
131eb62cbbSBarry Smith */
141eb62cbbSBarry Smith static int StashValues(Stash *stash,int row,int n, int *idxn,
151eb62cbbSBarry Smith                        Scalar *values,InsertMode addv)
168a729477SBarry Smith {
171eb62cbbSBarry Smith   int    i,j,N = stash->n,found,*n_idx, *n_idy;
181eb62cbbSBarry Smith   Scalar val,*n_array;
198a729477SBarry Smith 
201eb62cbbSBarry Smith   for ( i=0; i<n; i++ ) {
211eb62cbbSBarry Smith     found = 0;
221eb62cbbSBarry Smith     val = *values++;
238a729477SBarry Smith     for ( j=0; j<N; j++ ) {
241eb62cbbSBarry Smith       if ( stash->idx[j] == row && stash->idy[j] == idxn[i]) {
251eb62cbbSBarry Smith         /* found a match */
261eb62cbbSBarry Smith         if (addv == AddValues) stash->array[j] += val;
271eb62cbbSBarry Smith         else stash->array[j] = val;
281eb62cbbSBarry Smith         found = 1;
298a729477SBarry Smith         break;
308a729477SBarry Smith       }
318a729477SBarry Smith     }
321eb62cbbSBarry Smith     if (!found) { /* not found so add to end */
331eb62cbbSBarry Smith       if ( stash->n == stash->nmax ) {
341eb62cbbSBarry Smith         /* allocate a larger stash */
351eb62cbbSBarry Smith         n_array = (Scalar *) MALLOC( (stash->nmax + CHUNCKSIZE)*(
361eb62cbbSBarry Smith                                      2*sizeof(int) + sizeof(Scalar)));
371eb62cbbSBarry Smith         CHKPTR(n_array);
381eb62cbbSBarry Smith         n_idx = (int *) (n_array + stash->nmax + CHUNCKSIZE);
391eb62cbbSBarry Smith         n_idy = (int *) (n_idx + stash->nmax + CHUNCKSIZE);
401eb62cbbSBarry Smith         MEMCPY(n_array,stash->array,stash->nmax*sizeof(Scalar));
411eb62cbbSBarry Smith         MEMCPY(n_idx,stash->idx,stash->nmax*sizeof(int));
421eb62cbbSBarry Smith         MEMCPY(n_idy,stash->idy,stash->nmax*sizeof(int));
431eb62cbbSBarry Smith         if (stash->array) FREE(stash->array);
441eb62cbbSBarry Smith         stash->array = n_array; stash->idx = n_idx; stash->idy = n_idy;
451eb62cbbSBarry Smith         stash->nmax += CHUNCKSIZE;
461eb62cbbSBarry Smith       }
471eb62cbbSBarry Smith       stash->array[stash->n]   = val;
481eb62cbbSBarry Smith       stash->idx[stash->n]     = row;
491eb62cbbSBarry Smith       stash->idy[stash->n++]   = idxn[i];
501eb62cbbSBarry Smith     }
518a729477SBarry Smith   }
528a729477SBarry Smith   return 0;
538a729477SBarry Smith }
548a729477SBarry Smith 
559e25ed09SBarry Smith /* local utility routine that creates a mapping from the global column
569e25ed09SBarry Smith number to the local number in the off-diagonal part of the local
579e25ed09SBarry Smith storage of the matrix.  This is done in a non scable way since the
589e25ed09SBarry Smith length of colmap equals the global matrix length.
599e25ed09SBarry Smith */
609e25ed09SBarry Smith static int CreateColmap(Mat mat)
619e25ed09SBarry Smith {
6244a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
6344a69424SLois Curfman McInnes   Mat_AIJ    *B = (Mat_AIJ*) aij->B->data;
649e25ed09SBarry Smith   int        n = B->n,i;
659e25ed09SBarry Smith   aij->colmap = (int *) MALLOC( aij->N*sizeof(int) ); CHKPTR(aij->colmap);
669e25ed09SBarry Smith   MEMSET(aij->colmap,0,aij->N*sizeof(int));
67abc0e9e4SLois Curfman McInnes   for ( i=0; i<n; i++ ) aij->colmap[aij->garray[i]] = i+1;
689e25ed09SBarry Smith   return 0;
699e25ed09SBarry Smith }
709e25ed09SBarry Smith 
71*2ee70a88SLois Curfman McInnes static int MatSetValues_MPIAIJ(Mat mat,int m,int *idxm,int n,
721eb62cbbSBarry Smith                             int *idxn,Scalar *v,InsertMode addv)
738a729477SBarry Smith {
7444a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
751eb62cbbSBarry Smith   int        ierr,i,j, rstart = aij->rstart, rend = aij->rend;
761eb62cbbSBarry Smith   int        cstart = aij->cstart, cend = aij->cend,row,col;
778a729477SBarry Smith 
781eb62cbbSBarry Smith   if (aij->insertmode != NotSetValues && aij->insertmode != addv) {
791eb62cbbSBarry Smith     SETERR(1,"You cannot mix inserts and adds");
808a729477SBarry Smith   }
811eb62cbbSBarry Smith   aij->insertmode = addv;
828a729477SBarry Smith   for ( i=0; i<m; i++ ) {
83da3a660dSBarry Smith     if (idxm[i] < 0) SETERR(1,"Negative row index");
84da3a660dSBarry Smith     if (idxm[i] >= aij->M) SETERR(1,"Row index too large");
851eb62cbbSBarry Smith     if (idxm[i] >= rstart && idxm[i] < rend) {
861eb62cbbSBarry Smith       row = idxm[i] - rstart;
871eb62cbbSBarry Smith       for ( j=0; j<n; j++ ) {
88da3a660dSBarry Smith         if (idxn[j] < 0) SETERR(1,"Negative column index");
89da3a660dSBarry Smith         if (idxn[j] >= aij->N) SETERR(1,"Column index too large");
901eb62cbbSBarry Smith         if (idxn[j] >= cstart && idxn[j] < cend){
911eb62cbbSBarry Smith           col = idxn[j] - cstart;
921eb62cbbSBarry Smith           ierr = MatSetValues(aij->A,1,&row,1,&col,v+i*n+j,addv);CHKERR(ierr);
931eb62cbbSBarry Smith         }
941eb62cbbSBarry Smith         else {
95d6dfbf8fSBarry Smith           if (aij->assembled) {
969e25ed09SBarry Smith             if (!aij->colmap) {ierr = CreateColmap(mat); CHKERR(ierr);}
979e25ed09SBarry Smith             col = aij->colmap[idxn[j]] - 1;
989e25ed09SBarry Smith             if (col < 0) {
999e25ed09SBarry Smith               SETERR(1,"Cannot insert new off diagonal block nonzero in\
1009e25ed09SBarry Smith                      already\
101d6dfbf8fSBarry Smith                      assembled matrix. Contact petsc-maint@mcs.anl.gov\
102d6dfbf8fSBarry Smith                      if your need this feature");
103d6dfbf8fSBarry Smith             }
1049e25ed09SBarry Smith           }
1059e25ed09SBarry Smith           else col = idxn[j];
1061eb62cbbSBarry Smith           ierr = MatSetValues(aij->B,1,&row,1,&col,v+i*n+j,addv);CHKERR(ierr);
1071eb62cbbSBarry Smith         }
1081eb62cbbSBarry Smith       }
1091eb62cbbSBarry Smith     }
1101eb62cbbSBarry Smith     else {
1111eb62cbbSBarry Smith       ierr = StashValues(&aij->stash,idxm[i],n,idxn,v+i*n,addv);CHKERR(ierr);
1121eb62cbbSBarry Smith     }
1138a729477SBarry Smith   }
1148a729477SBarry Smith   return 0;
1158a729477SBarry Smith }
1168a729477SBarry Smith 
1178a729477SBarry Smith /*
1181eb62cbbSBarry Smith     the assembly code is alot like the code for vectors, we should
1191eb62cbbSBarry Smith     sometime derive a single assembly code that can be used for
1201eb62cbbSBarry Smith     either case.
1218a729477SBarry Smith */
1228a729477SBarry Smith 
12344a69424SLois Curfman McInnes static int MatBeginAssemble_MPIAIJ(Mat mat)
1248a729477SBarry Smith {
12544a69424SLois Curfman McInnes   Mat_MPIAIJ  *aij = (Mat_MPIAIJ *) mat->data;
126d6dfbf8fSBarry Smith   MPI_Comm    comm = mat->comm;
1276abc6512SBarry Smith   int         numtids = aij->numtids, *owners = aij->rowners;
1281eb62cbbSBarry Smith   int         mytid = aij->mytid;
1291eb62cbbSBarry Smith   MPI_Request *send_waits,*recv_waits;
1306abc6512SBarry Smith   int         *nprocs,i,j,idx,*procs,nsends,nreceives,nmax,*work;
1311eb62cbbSBarry Smith   int         tag = 50, *owner,*starts,count;
1321eb62cbbSBarry Smith   InsertMode  addv;
1331eb62cbbSBarry Smith   Scalar      *rvalues,*svalues;
1341eb62cbbSBarry Smith 
1351eb62cbbSBarry Smith   /* make sure all processors are either in INSERTMODE or ADDMODE */
13628988994SBarry Smith   MPI_Allreduce((void *) &aij->insertmode,(void *) &addv,1,MPI_INT,
1371eb62cbbSBarry Smith                 MPI_BOR,comm);
1381eb62cbbSBarry Smith   if (addv == (AddValues|InsertValues)) {
1391eb62cbbSBarry Smith     SETERR(1,"Some processors have inserted while others have added");
1401eb62cbbSBarry Smith   }
1411eb62cbbSBarry Smith   aij->insertmode = addv; /* in case this processor had no cache */
1421eb62cbbSBarry Smith 
1431eb62cbbSBarry Smith   /*  first count number of contributors to each processor */
1441eb62cbbSBarry Smith   nprocs = (int *) MALLOC( 2*numtids*sizeof(int) ); CHKPTR(nprocs);
1451eb62cbbSBarry Smith   MEMSET(nprocs,0,2*numtids*sizeof(int)); procs = nprocs + numtids;
1461eb62cbbSBarry Smith   owner = (int *) MALLOC( (aij->stash.n+1)*sizeof(int) ); CHKPTR(owner);
1471eb62cbbSBarry Smith   for ( i=0; i<aij->stash.n; i++ ) {
1481eb62cbbSBarry Smith     idx = aij->stash.idx[i];
1491eb62cbbSBarry Smith     for ( j=0; j<numtids; j++ ) {
1501eb62cbbSBarry Smith       if (idx >= owners[j] && idx < owners[j+1]) {
1511eb62cbbSBarry Smith         nprocs[j]++; procs[j] = 1; owner[i] = j; break;
1528a729477SBarry Smith       }
1538a729477SBarry Smith     }
1548a729477SBarry Smith   }
1551eb62cbbSBarry Smith   nsends = 0;  for ( i=0; i<numtids; i++ ) { nsends += procs[i];}
1561eb62cbbSBarry Smith 
1571eb62cbbSBarry Smith   /* inform other processors of number of messages and max length*/
1581eb62cbbSBarry Smith   work = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(work);
1591eb62cbbSBarry Smith   MPI_Allreduce((void *) procs,(void *) work,numtids,MPI_INT,MPI_SUM,comm);
1601eb62cbbSBarry Smith   nreceives = work[mytid];
1611eb62cbbSBarry Smith   MPI_Allreduce((void *) nprocs,(void *) work,numtids,MPI_INT,MPI_MAX,comm);
1621eb62cbbSBarry Smith   nmax = work[mytid];
1631eb62cbbSBarry Smith   FREE(work);
1641eb62cbbSBarry Smith 
1651eb62cbbSBarry Smith   /* post receives:
1661eb62cbbSBarry Smith        1) each message will consist of ordered pairs
1671eb62cbbSBarry Smith      (global index,value) we store the global index as a double
168d6dfbf8fSBarry Smith      to simplify the message passing.
1691eb62cbbSBarry Smith        2) since we don't know how long each individual message is we
1701eb62cbbSBarry Smith      allocate the largest needed buffer for each receive. Potentially
1711eb62cbbSBarry Smith      this is a lot of wasted space.
1721eb62cbbSBarry Smith 
1731eb62cbbSBarry Smith 
1741eb62cbbSBarry Smith        This could be done better.
1751eb62cbbSBarry Smith   */
17628988994SBarry Smith   rvalues = (Scalar *) MALLOC(3*(nreceives+1)*(nmax+1)*sizeof(Scalar));
1771eb62cbbSBarry Smith   CHKPTR(rvalues);
1781eb62cbbSBarry Smith   recv_waits = (MPI_Request *) MALLOC((nreceives+1)*sizeof(MPI_Request));
1791eb62cbbSBarry Smith   CHKPTR(recv_waits);
1801eb62cbbSBarry Smith   for ( i=0; i<nreceives; i++ ) {
1811eb62cbbSBarry Smith     MPI_Irecv((void *)(rvalues+3*nmax*i),3*nmax,MPI_SCALAR,MPI_ANY_SOURCE,tag,
1821eb62cbbSBarry Smith               comm,recv_waits+i);
1831eb62cbbSBarry Smith   }
1841eb62cbbSBarry Smith 
1851eb62cbbSBarry Smith   /* do sends:
1861eb62cbbSBarry Smith       1) starts[i] gives the starting index in svalues for stuff going to
1871eb62cbbSBarry Smith          the ith processor
1881eb62cbbSBarry Smith   */
1891eb62cbbSBarry Smith   svalues = (Scalar *) MALLOC( 3*(aij->stash.n+1)*sizeof(Scalar) );
1901eb62cbbSBarry Smith   CHKPTR(svalues);
1911eb62cbbSBarry Smith   send_waits = (MPI_Request *) MALLOC( (nsends+1)*sizeof(MPI_Request));
1921eb62cbbSBarry Smith   CHKPTR(send_waits);
1931eb62cbbSBarry Smith   starts = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(starts);
1941eb62cbbSBarry Smith   starts[0] = 0;
1951eb62cbbSBarry Smith   for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
1961eb62cbbSBarry Smith   for ( i=0; i<aij->stash.n; i++ ) {
1971eb62cbbSBarry Smith     svalues[3*starts[owner[i]]]       = (Scalar)  aij->stash.idx[i];
1981eb62cbbSBarry Smith     svalues[3*starts[owner[i]]+1]     = (Scalar)  aij->stash.idy[i];
1991eb62cbbSBarry Smith     svalues[3*(starts[owner[i]]++)+2] =  aij->stash.array[i];
2001eb62cbbSBarry Smith   }
2011eb62cbbSBarry Smith   FREE(owner);
2021eb62cbbSBarry Smith   starts[0] = 0;
2031eb62cbbSBarry Smith   for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
2041eb62cbbSBarry Smith   count = 0;
2051eb62cbbSBarry Smith   for ( i=0; i<numtids; i++ ) {
2061eb62cbbSBarry Smith     if (procs[i]) {
2071eb62cbbSBarry Smith       MPI_Isend((void*)(svalues+3*starts[i]),3*nprocs[i],MPI_SCALAR,i,tag,
2081eb62cbbSBarry Smith                 comm,send_waits+count++);
2091eb62cbbSBarry Smith     }
2101eb62cbbSBarry Smith   }
2111eb62cbbSBarry Smith   FREE(starts); FREE(nprocs);
2121eb62cbbSBarry Smith 
2131eb62cbbSBarry Smith   /* Free cache space */
2141eb62cbbSBarry Smith   aij->stash.nmax = aij->stash.n = 0;
2151eb62cbbSBarry Smith   if (aij->stash.array){ FREE(aij->stash.array); aij->stash.array = 0;}
2161eb62cbbSBarry Smith 
2171eb62cbbSBarry Smith   aij->svalues    = svalues;       aij->rvalues = rvalues;
2181eb62cbbSBarry Smith   aij->nsends     = nsends;         aij->nrecvs = nreceives;
2191eb62cbbSBarry Smith   aij->send_waits = send_waits; aij->recv_waits = recv_waits;
2201eb62cbbSBarry Smith   aij->rmax       = nmax;
2211eb62cbbSBarry Smith 
2221eb62cbbSBarry Smith   return 0;
2231eb62cbbSBarry Smith }
22444a69424SLois Curfman McInnes extern int MatSetUpMultiply_MPIAIJ(Mat);
2251eb62cbbSBarry Smith 
22644a69424SLois Curfman McInnes static int MatEndAssemble_MPIAIJ(Mat mat)
2271eb62cbbSBarry Smith {
2281eb62cbbSBarry Smith   int        ierr;
22944a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
2301eb62cbbSBarry Smith 
2311eb62cbbSBarry Smith   MPI_Status  *send_status,recv_status;
2326abc6512SBarry Smith   int         imdex,nrecvs = aij->nrecvs, count = nrecvs, i, n;
2331eb62cbbSBarry Smith   int         row,col;
2341eb62cbbSBarry Smith   Scalar      *values,val;
2351eb62cbbSBarry Smith   InsertMode  addv = aij->insertmode;
2361eb62cbbSBarry Smith 
2371eb62cbbSBarry Smith   /*  wait on receives */
2381eb62cbbSBarry Smith   while (count) {
239d6dfbf8fSBarry Smith     MPI_Waitany(nrecvs,aij->recv_waits,&imdex,&recv_status);
2401eb62cbbSBarry Smith     /* unpack receives into our local space */
241d6dfbf8fSBarry Smith     values = aij->rvalues + 3*imdex*aij->rmax;
2421eb62cbbSBarry Smith     MPI_Get_count(&recv_status,MPI_SCALAR,&n);
2431eb62cbbSBarry Smith     n = n/3;
2441eb62cbbSBarry Smith     for ( i=0; i<n; i++ ) {
2451eb62cbbSBarry Smith       row = (int) PETSCREAL(values[3*i]) - aij->rstart;
2461eb62cbbSBarry Smith       col = (int) PETSCREAL(values[3*i+1]);
2471eb62cbbSBarry Smith       val = values[3*i+2];
2481eb62cbbSBarry Smith       if (col >= aij->cstart && col < aij->cend) {
2491eb62cbbSBarry Smith           col -= aij->cstart;
2501eb62cbbSBarry Smith         MatSetValues(aij->A,1,&row,1,&col,&val,addv);
2511eb62cbbSBarry Smith       }
2521eb62cbbSBarry Smith       else {
253d6dfbf8fSBarry Smith         if (aij->assembled) {
2549e25ed09SBarry Smith           if (!aij->colmap) {ierr = CreateColmap(mat); CHKERR(ierr);}
2559e25ed09SBarry Smith           col = aij->colmap[col] - 1;
2569e25ed09SBarry Smith           if (col < 0) {
2579e25ed09SBarry Smith             SETERR(1,"Cannot insert new off diagonal block nonzero in\
2589e25ed09SBarry Smith                      already\
259d6dfbf8fSBarry Smith                      assembled matrix. Contact petsc-maint@mcs.anl.gov\
260d6dfbf8fSBarry Smith                      if your need this feature");
261d6dfbf8fSBarry Smith           }
2629e25ed09SBarry Smith         }
2631eb62cbbSBarry Smith         MatSetValues(aij->B,1,&row,1,&col,&val,addv);
2641eb62cbbSBarry Smith       }
2651eb62cbbSBarry Smith     }
2661eb62cbbSBarry Smith     count--;
2671eb62cbbSBarry Smith   }
2681eb62cbbSBarry Smith   FREE(aij->recv_waits); FREE(aij->rvalues);
2691eb62cbbSBarry Smith 
2701eb62cbbSBarry Smith   /* wait on sends */
2711eb62cbbSBarry Smith   if (aij->nsends) {
2721eb62cbbSBarry Smith     send_status = (MPI_Status *) MALLOC( aij->nsends*sizeof(MPI_Status) );
2731eb62cbbSBarry Smith     CHKPTR(send_status);
2741eb62cbbSBarry Smith     MPI_Waitall(aij->nsends,aij->send_waits,send_status);
2751eb62cbbSBarry Smith     FREE(send_status);
2761eb62cbbSBarry Smith   }
2771eb62cbbSBarry Smith   FREE(aij->send_waits); FREE(aij->svalues);
2781eb62cbbSBarry Smith 
2791eb62cbbSBarry Smith   aij->insertmode = NotSetValues;
2801eb62cbbSBarry Smith   ierr = MatBeginAssembly(aij->A); CHKERR(ierr);
2811eb62cbbSBarry Smith   ierr = MatEndAssembly(aij->A); CHKERR(ierr);
2821eb62cbbSBarry Smith 
2839e25ed09SBarry Smith   if (!aij->assembled) {
284d3c9fed9SLois Curfman McInnes     ierr = MatSetUpMultiply_MPIAIJ(mat); CHKERR(ierr);
2859e25ed09SBarry Smith   }
2861eb62cbbSBarry Smith   ierr = MatBeginAssembly(aij->B); CHKERR(ierr);
2871eb62cbbSBarry Smith   ierr = MatEndAssembly(aij->B); CHKERR(ierr);
288d6dfbf8fSBarry Smith   aij->assembled = 1;
2898a729477SBarry Smith   return 0;
2908a729477SBarry Smith }
2918a729477SBarry Smith 
292*2ee70a88SLois Curfman McInnes static int MatZeroEntries_MPIAIJ(Mat A)
2931eb62cbbSBarry Smith {
29444a69424SLois Curfman McInnes   Mat_MPIAIJ *l = (Mat_MPIAIJ *) A->data;
2951eb62cbbSBarry Smith 
2961eb62cbbSBarry Smith   MatZeroEntries(l->A); MatZeroEntries(l->B);
2971eb62cbbSBarry Smith   return 0;
2981eb62cbbSBarry Smith }
2991eb62cbbSBarry Smith 
3001eb62cbbSBarry Smith /* again this uses the same basic stratagy as in the assembly and
3011eb62cbbSBarry Smith    scatter create routines, we should try to do it systemamatically
3021eb62cbbSBarry Smith    if we can figure out the proper level of generality. */
3031eb62cbbSBarry Smith 
3041eb62cbbSBarry Smith /* the code does not do the diagonal entries correctly unless the
3051eb62cbbSBarry Smith    matrix is square and the column and row owerships are identical.
3061eb62cbbSBarry Smith    This is a BUG. The only way to fix it seems to be to access
3071eb62cbbSBarry Smith    aij->A and aij->B directly and not through the MatZeroRows()
3081eb62cbbSBarry Smith    routine.
3091eb62cbbSBarry Smith */
31044a69424SLois Curfman McInnes static int MatZeroRows_MPIAIJ(Mat A,IS is,Scalar *diag)
3111eb62cbbSBarry Smith {
31244a69424SLois Curfman McInnes   Mat_MPIAIJ     *l = (Mat_MPIAIJ *) A->data;
3131eb62cbbSBarry Smith   int            i,ierr,N, *rows,*owners = l->rowners,numtids = l->numtids;
3146abc6512SBarry Smith   int            *procs,*nprocs,j,found,idx,nsends,*work;
3151eb62cbbSBarry Smith   int            nmax,*svalues,*starts,*owner,nrecvs,mytid = l->mytid;
3166abc6512SBarry Smith   int            *rvalues,tag = 67,count,base,slen,n,*source;
317d6dfbf8fSBarry Smith   int            *lens,imdex,*lrows,*values;
318d6dfbf8fSBarry Smith   MPI_Comm       comm = A->comm;
3191eb62cbbSBarry Smith   MPI_Request    *send_waits,*recv_waits;
3201eb62cbbSBarry Smith   MPI_Status     recv_status,*send_status;
3211eb62cbbSBarry Smith   IS             istmp;
3221eb62cbbSBarry Smith 
32344a69424SLois Curfman McInnes   if (!l->assembled) SETERR(1,"MatZeroRows_MPIAIJ: must assemble matrix first");
3241eb62cbbSBarry Smith   ierr = ISGetLocalSize(is,&N); CHKERR(ierr);
3251eb62cbbSBarry Smith   ierr = ISGetIndices(is,&rows); CHKERR(ierr);
3261eb62cbbSBarry Smith 
3271eb62cbbSBarry Smith   /*  first count number of contributors to each processor */
3281eb62cbbSBarry Smith   nprocs = (int *) MALLOC( 2*numtids*sizeof(int) ); CHKPTR(nprocs);
3291eb62cbbSBarry Smith   MEMSET(nprocs,0,2*numtids*sizeof(int)); procs = nprocs + numtids;
3301eb62cbbSBarry Smith   owner = (int *) MALLOC((N+1)*sizeof(int)); CHKPTR(owner); /* see note*/
3311eb62cbbSBarry Smith   for ( i=0; i<N; i++ ) {
3321eb62cbbSBarry Smith     idx = rows[i];
3331eb62cbbSBarry Smith     found = 0;
3341eb62cbbSBarry Smith     for ( j=0; j<numtids; j++ ) {
3351eb62cbbSBarry Smith       if (idx >= owners[j] && idx < owners[j+1]) {
3361eb62cbbSBarry Smith         nprocs[j]++; procs[j] = 1; owner[i] = j; found = 1; break;
3371eb62cbbSBarry Smith       }
3381eb62cbbSBarry Smith     }
339d6dfbf8fSBarry Smith     if (!found) SETERR(1,"Imdex out of range");
3401eb62cbbSBarry Smith   }
3411eb62cbbSBarry Smith   nsends = 0;  for ( i=0; i<numtids; i++ ) { nsends += procs[i];}
3421eb62cbbSBarry Smith 
3431eb62cbbSBarry Smith   /* inform other processors of number of messages and max length*/
3441eb62cbbSBarry Smith   work = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(work);
3451eb62cbbSBarry Smith   MPI_Allreduce((void *) procs,(void *) work,numtids,MPI_INT,MPI_SUM,comm);
3461eb62cbbSBarry Smith   nrecvs = work[mytid];
3471eb62cbbSBarry Smith   MPI_Allreduce((void *) nprocs,(void *) work,numtids,MPI_INT,MPI_MAX,comm);
3481eb62cbbSBarry Smith   nmax = work[mytid];
3491eb62cbbSBarry Smith   FREE(work);
3501eb62cbbSBarry Smith 
3511eb62cbbSBarry Smith   /* post receives:   */
35228988994SBarry Smith   rvalues = (int *) MALLOC((nrecvs+1)*(nmax+1)*sizeof(int)); /*see note */
3531eb62cbbSBarry Smith   CHKPTR(rvalues);
3541eb62cbbSBarry Smith   recv_waits = (MPI_Request *) MALLOC((nrecvs+1)*sizeof(MPI_Request));
3551eb62cbbSBarry Smith   CHKPTR(recv_waits);
3561eb62cbbSBarry Smith   for ( i=0; i<nrecvs; i++ ) {
3571eb62cbbSBarry Smith     MPI_Irecv((void *)(rvalues+nmax*i),nmax,MPI_INT,MPI_ANY_SOURCE,tag,
3581eb62cbbSBarry Smith               comm,recv_waits+i);
3591eb62cbbSBarry Smith   }
3601eb62cbbSBarry Smith 
3611eb62cbbSBarry Smith   /* do sends:
3621eb62cbbSBarry Smith       1) starts[i] gives the starting index in svalues for stuff going to
3631eb62cbbSBarry Smith          the ith processor
3641eb62cbbSBarry Smith   */
3651eb62cbbSBarry Smith   svalues = (int *) MALLOC( (N+1)*sizeof(int) ); CHKPTR(svalues);
3661eb62cbbSBarry Smith   send_waits = (MPI_Request *) MALLOC( (nsends+1)*sizeof(MPI_Request));
3671eb62cbbSBarry Smith   CHKPTR(send_waits);
3681eb62cbbSBarry Smith   starts = (int *) MALLOC( (numtids+1)*sizeof(int) ); CHKPTR(starts);
3691eb62cbbSBarry Smith   starts[0] = 0;
3701eb62cbbSBarry Smith   for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
3711eb62cbbSBarry Smith   for ( i=0; i<N; i++ ) {
3721eb62cbbSBarry Smith     svalues[starts[owner[i]]++] = rows[i];
3731eb62cbbSBarry Smith   }
3741eb62cbbSBarry Smith   ISRestoreIndices(is,&rows);
3751eb62cbbSBarry Smith 
3761eb62cbbSBarry Smith   starts[0] = 0;
3771eb62cbbSBarry Smith   for ( i=1; i<numtids+1; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
3781eb62cbbSBarry Smith   count = 0;
3791eb62cbbSBarry Smith   for ( i=0; i<numtids; i++ ) {
3801eb62cbbSBarry Smith     if (procs[i]) {
3811eb62cbbSBarry Smith       MPI_Isend((void*)(svalues+starts[i]),nprocs[i],MPI_INT,i,tag,
3821eb62cbbSBarry Smith                 comm,send_waits+count++);
3831eb62cbbSBarry Smith     }
3841eb62cbbSBarry Smith   }
3851eb62cbbSBarry Smith   FREE(starts);
3861eb62cbbSBarry Smith 
3871eb62cbbSBarry Smith   base = owners[mytid];
3881eb62cbbSBarry Smith 
3891eb62cbbSBarry Smith   /*  wait on receives */
3901eb62cbbSBarry Smith   lens = (int *) MALLOC( 2*(nrecvs+1)*sizeof(int) ); CHKPTR(lens);
3911eb62cbbSBarry Smith   source = lens + nrecvs;
3921eb62cbbSBarry Smith   count = nrecvs; slen = 0;
3931eb62cbbSBarry Smith   while (count) {
394d6dfbf8fSBarry Smith     MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);
3951eb62cbbSBarry Smith     /* unpack receives into our local space */
3961eb62cbbSBarry Smith     MPI_Get_count(&recv_status,MPI_INT,&n);
397d6dfbf8fSBarry Smith     source[imdex]  = recv_status.MPI_SOURCE;
398d6dfbf8fSBarry Smith     lens[imdex]  = n;
3991eb62cbbSBarry Smith     slen += n;
4001eb62cbbSBarry Smith     count--;
4011eb62cbbSBarry Smith   }
4021eb62cbbSBarry Smith   FREE(recv_waits);
4031eb62cbbSBarry Smith 
4041eb62cbbSBarry Smith   /* move the data into the send scatter */
4051eb62cbbSBarry Smith   lrows = (int *) MALLOC( slen*sizeof(int) ); CHKPTR(lrows);
4061eb62cbbSBarry Smith   count = 0;
4071eb62cbbSBarry Smith   for ( i=0; i<nrecvs; i++ ) {
4081eb62cbbSBarry Smith     values = rvalues + i*nmax;
4091eb62cbbSBarry Smith     for ( j=0; j<lens[i]; j++ ) {
4101eb62cbbSBarry Smith       lrows[count++] = values[j] - base;
4111eb62cbbSBarry Smith     }
4121eb62cbbSBarry Smith   }
4131eb62cbbSBarry Smith   FREE(rvalues); FREE(lens);
4141eb62cbbSBarry Smith   FREE(owner); FREE(nprocs);
4151eb62cbbSBarry Smith 
4161eb62cbbSBarry Smith   /* actually zap the local rows */
4171eb62cbbSBarry Smith   ierr = ISCreateSequential(slen,lrows,&istmp); CHKERR(ierr);  FREE(lrows);
4181eb62cbbSBarry Smith   ierr = MatZeroRows(l->A,istmp,diag); CHKERR(ierr);
4191eb62cbbSBarry Smith   ierr = MatZeroRows(l->B,istmp,0); CHKERR(ierr);
4201eb62cbbSBarry Smith   ierr = ISDestroy(istmp); CHKERR(ierr);
4211eb62cbbSBarry Smith 
4221eb62cbbSBarry Smith   /* wait on sends */
4231eb62cbbSBarry Smith   if (nsends) {
4241eb62cbbSBarry Smith     send_status = (MPI_Status *) MALLOC( nsends*sizeof(MPI_Status) );
4251eb62cbbSBarry Smith     CHKPTR(send_status);
4261eb62cbbSBarry Smith     MPI_Waitall(nsends,send_waits,send_status);
4271eb62cbbSBarry Smith     FREE(send_status);
4281eb62cbbSBarry Smith   }
4291eb62cbbSBarry Smith   FREE(send_waits); FREE(svalues);
4301eb62cbbSBarry Smith 
4311eb62cbbSBarry Smith 
4321eb62cbbSBarry Smith   return 0;
4331eb62cbbSBarry Smith }
4341eb62cbbSBarry Smith 
43544a69424SLois Curfman McInnes static int MatMult_MPIAIJ(Mat aijin,Vec xx,Vec yy)
4361eb62cbbSBarry Smith {
43744a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
4381eb62cbbSBarry Smith   int        ierr;
43944a69424SLois Curfman McInnes   if (!aij->assembled) SETERR(1,"MatMult_MPIAIJ: must assemble matrix first");
440d6dfbf8fSBarry Smith   ierr = VecScatterBegin(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx);
4411eb62cbbSBarry Smith   CHKERR(ierr);
4421eb62cbbSBarry Smith   ierr = MatMult(aij->A,xx,yy); CHKERR(ierr);
443d6dfbf8fSBarry Smith   ierr = VecScatterEnd(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx);
444d6dfbf8fSBarry Smith   CHKERR(ierr);
4451eb62cbbSBarry Smith   ierr = MatMultAdd(aij->B,aij->lvec,yy,yy); CHKERR(ierr);
4461eb62cbbSBarry Smith   return 0;
4471eb62cbbSBarry Smith }
4481eb62cbbSBarry Smith 
44944a69424SLois Curfman McInnes static int MatMultAdd_MPIAIJ(Mat aijin,Vec xx,Vec yy,Vec zz)
450da3a660dSBarry Smith {
45144a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
452da3a660dSBarry Smith   int        ierr;
45344a69424SLois Curfman McInnes   if (!aij->assembled) SETERR(1,"MatMult_MPIAIJ: must assemble matrix first");
454da3a660dSBarry Smith   ierr = VecScatterBegin(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx);
455da3a660dSBarry Smith   CHKERR(ierr);
456da3a660dSBarry Smith   ierr = MatMultAdd(aij->A,xx,yy,zz); CHKERR(ierr);
457da3a660dSBarry Smith   ierr = VecScatterEnd(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx);
458da3a660dSBarry Smith   CHKERR(ierr);
459da3a660dSBarry Smith   ierr = MatMultAdd(aij->B,aij->lvec,zz,zz); CHKERR(ierr);
460da3a660dSBarry Smith   return 0;
461da3a660dSBarry Smith }
462da3a660dSBarry Smith 
46344a69424SLois Curfman McInnes static int MatMultTrans_MPIAIJ(Mat aijin,Vec xx,Vec yy)
464da3a660dSBarry Smith {
46544a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
466da3a660dSBarry Smith   int        ierr;
467da3a660dSBarry Smith 
46844a69424SLois Curfman McInnes   if (!aij->assembled)
46944a69424SLois Curfman McInnes     SETERR(1,"MatMulTrans_MPIAIJ: must assemble matrix first");
470da3a660dSBarry Smith   /* do nondiagonal part */
471da3a660dSBarry Smith   ierr = MatMultTrans(aij->B,xx,aij->lvec); CHKERR(ierr);
472da3a660dSBarry Smith   /* send it on its way */
473da3a660dSBarry Smith   ierr = VecScatterBegin(aij->lvec,0,yy,0,AddValues,
474da3a660dSBarry Smith                          ScatterAll|ScatterReverse,aij->Mvctx); CHKERR(ierr);
475da3a660dSBarry Smith   /* do local part */
476da3a660dSBarry Smith   ierr = MatMultTrans(aij->A,xx,yy); CHKERR(ierr);
477da3a660dSBarry Smith   /* receive remote parts: note this assumes the values are not actually */
478da3a660dSBarry Smith   /* inserted in yy until the next line, which is true for my implementation*/
479da3a660dSBarry Smith   /* but is not perhaps always true. */
480da3a660dSBarry Smith   ierr = VecScatterEnd(aij->lvec,0,yy,0,AddValues,ScatterAll|ScatterReverse,
481da3a660dSBarry Smith                          aij->Mvctx); CHKERR(ierr);
482da3a660dSBarry Smith   return 0;
483da3a660dSBarry Smith }
484da3a660dSBarry Smith 
48544a69424SLois Curfman McInnes static int MatMultTransAdd_MPIAIJ(Mat aijin,Vec xx,Vec yy,Vec zz)
486da3a660dSBarry Smith {
48744a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
488da3a660dSBarry Smith   int        ierr;
489da3a660dSBarry Smith 
49044a69424SLois Curfman McInnes   if (!aij->assembled)
49144a69424SLois Curfman McInnes     SETERR(1,"MatMulTransAdd_MPIAIJ: must assemble matrix first");
492da3a660dSBarry Smith   /* do nondiagonal part */
493da3a660dSBarry Smith   ierr = MatMultTrans(aij->B,xx,aij->lvec); CHKERR(ierr);
494da3a660dSBarry Smith   /* send it on its way */
495da3a660dSBarry Smith   ierr = VecScatterBegin(aij->lvec,0,zz,0,AddValues,
496da3a660dSBarry Smith                          ScatterAll|ScatterReverse,aij->Mvctx); CHKERR(ierr);
497da3a660dSBarry Smith   /* do local part */
498da3a660dSBarry Smith   ierr = MatMultTransAdd(aij->A,xx,yy,zz); CHKERR(ierr);
499da3a660dSBarry Smith   /* receive remote parts: note this assumes the values are not actually */
500da3a660dSBarry Smith   /* inserted in yy until the next line, which is true for my implementation*/
501da3a660dSBarry Smith   /* but is not perhaps always true. */
502da3a660dSBarry Smith   ierr = VecScatterEnd(aij->lvec,0,zz,0,AddValues,ScatterAll|ScatterReverse,
503da3a660dSBarry Smith                          aij->Mvctx); CHKERR(ierr);
504da3a660dSBarry Smith   return 0;
505da3a660dSBarry Smith }
506da3a660dSBarry Smith 
5071eb62cbbSBarry Smith /*
5081eb62cbbSBarry Smith   This only works correctly for square matrices where the subblock A->A is the
5091eb62cbbSBarry Smith    diagonal block
5101eb62cbbSBarry Smith */
511d1710a03SLois Curfman McInnes static int MatGetDiagonal_MPIAIJ(Mat Ain,Vec v)
5121eb62cbbSBarry Smith {
51344a69424SLois Curfman McInnes   Mat_MPIAIJ *A = (Mat_MPIAIJ *) Ain->data;
51444a69424SLois Curfman McInnes   if (!A->assembled) SETERR(1,"MatGetDiag_MPIAIJ: must assemble matrix first");
5151eb62cbbSBarry Smith   return MatGetDiagonal(A->A,v);
5161eb62cbbSBarry Smith }
5171eb62cbbSBarry Smith 
51844a69424SLois Curfman McInnes static int MatDestroy_MPIAIJ(PetscObject obj)
5191eb62cbbSBarry Smith {
5201eb62cbbSBarry Smith   Mat        mat = (Mat) obj;
52144a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
5221eb62cbbSBarry Smith   int        ierr;
523a5a9c739SBarry Smith #if defined(PETSC_LOG)
524a5a9c739SBarry Smith   PLogObjectState(obj,"Rows %d Cols %d",aij->M,aij->N);
525a5a9c739SBarry Smith #endif
5261eb62cbbSBarry Smith   FREE(aij->rowners);
5271eb62cbbSBarry Smith   ierr = MatDestroy(aij->A); CHKERR(ierr);
5281eb62cbbSBarry Smith   ierr = MatDestroy(aij->B); CHKERR(ierr);
5299e25ed09SBarry Smith   if (aij->colmap) FREE(aij->colmap);
5309e25ed09SBarry Smith   if (aij->garray) FREE(aij->garray);
5311eb62cbbSBarry Smith   if (aij->lvec) VecDestroy(aij->lvec);
5321eb62cbbSBarry Smith   if (aij->Mvctx) VecScatterCtxDestroy(aij->Mvctx);
533a5a9c739SBarry Smith   FREE(aij);
534a5a9c739SBarry Smith   PLogObjectDestroy(mat);
535a5a9c739SBarry Smith   PETSCHEADERDESTROY(mat);
5361eb62cbbSBarry Smith   return 0;
5371eb62cbbSBarry Smith }
5381eb62cbbSBarry Smith 
53944a69424SLois Curfman McInnes static int MatView_MPIAIJ(PetscObject obj,Viewer viewer)
5401eb62cbbSBarry Smith {
5411eb62cbbSBarry Smith   Mat        mat = (Mat) obj;
54244a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
5431eb62cbbSBarry Smith   int        ierr;
544d13ab20cSBarry Smith   PetscObject vobj = (PetscObject) viewer;
5451eb62cbbSBarry Smith 
546154123eaSLois Curfman McInnes   if (!viewer) { /* so that viewers may be used from debuggers */
547154123eaSLois Curfman McInnes     viewer = STDOUT_VIEWER; vobj = (PetscObject) viewer;
548154123eaSLois Curfman McInnes   }
54944a69424SLois Curfman McInnes   if (!aij->assembled) SETERR(1,"MatView_MPIAIJ: must assemble matrix first");
550d13ab20cSBarry Smith   if (vobj->cookie == VIEWER_COOKIE) {
551d13ab20cSBarry Smith     FILE *fd = ViewerFileGetPointer(viewer);
552d13ab20cSBarry Smith     if (vobj->type == FILE_VIEWER) {
553d6dfbf8fSBarry Smith       MPE_Seq_begin(mat->comm,1);
554d13ab20cSBarry Smith       fprintf(fd,"[%d] rows %d starts %d ends %d cols %d starts %d ends %d\n",
5551eb62cbbSBarry Smith              aij->mytid,aij->m,aij->rstart,aij->rend,aij->n,aij->cstart,
5561eb62cbbSBarry Smith              aij->cend);
557da69df5fSBarry Smith       ierr = MatView(aij->A,viewer); CHKERR(ierr);
558da69df5fSBarry Smith       ierr = MatView(aij->B,viewer); CHKERR(ierr);
559d13ab20cSBarry Smith       fflush(fd);
560d6dfbf8fSBarry Smith       MPE_Seq_end(mat->comm,1);
561d13ab20cSBarry Smith     }
56295373324SBarry Smith     else if (vobj->type == FILES_VIEWER) {
56395373324SBarry Smith       int numtids = aij->numtids, mytid = aij->mytid;
56495373324SBarry Smith       if (numtids == 1) {
56595373324SBarry Smith         ierr = MatView(aij->A,viewer); CHKERR(ierr);
56695373324SBarry Smith       }
56795373324SBarry Smith       else {
56895373324SBarry Smith         /* assemble the entire matrix onto first processor. */
56995373324SBarry Smith         Mat     A;
570*2ee70a88SLois Curfman McInnes         Mat_AIJ *Aloc;
5712eb8c8abSBarry Smith         int     M = aij->M, N = aij->N,m,*ai,*aj,row,*cols,i,*ct;
57295373324SBarry Smith         Scalar  *a;
573*2ee70a88SLois Curfman McInnes 
57495373324SBarry Smith         if (!mytid) {
57595373324SBarry Smith           ierr = MatCreateMPIAIJ(mat->comm,M,N,M,N,0,0,0,0,&A);
57695373324SBarry Smith         }
57795373324SBarry Smith         else {
57895373324SBarry Smith           ierr = MatCreateMPIAIJ(mat->comm,0,0,M,N,0,0,0,0,&A);
57995373324SBarry Smith         }
58095373324SBarry Smith         CHKERR(ierr);
58195373324SBarry Smith 
58295373324SBarry Smith         /* copy over the A part */
583*2ee70a88SLois Curfman McInnes         Aloc = (Mat_AIJ*) aij->A->data;
584*2ee70a88SLois Curfman McInnes         m = Aloc->m; ai = Aloc->i; aj = Aloc->j; a = Aloc->a;
58595373324SBarry Smith         row = aij->rstart;
58695373324SBarry Smith         for ( i=0; i<ai[m]; i++ ) {aj[i] += aij->cstart - 1;}
58795373324SBarry Smith         for ( i=0; i<m; i++ ) {
58895373324SBarry Smith           ierr = MatSetValues(A,1,&row,ai[i+1]-ai[i],aj,a,InsertValues);
58995373324SBarry Smith           CHKERR(ierr);
59095373324SBarry Smith           row++; a += ai[i+1]-ai[i]; aj += ai[i+1]-ai[i];
59195373324SBarry Smith         }
592*2ee70a88SLois Curfman McInnes         aj = Aloc->j;
59395373324SBarry Smith         for ( i=0; i<ai[m]; i++ ) {aj[i] -= aij->cstart - 1;}
59495373324SBarry Smith 
59595373324SBarry Smith         /* copy over the B part */
596*2ee70a88SLois Curfman McInnes         Aloc = (Mat_AIJ*) aij->B->data;
597*2ee70a88SLois Curfman McInnes         m = Aloc->m;  ai = Aloc->i; aj = Aloc->j; a = Aloc->a;
59895373324SBarry Smith         row = aij->rstart;
59995373324SBarry Smith         ct = cols = (int *) MALLOC( (ai[m]+1)*sizeof(int) ); CHKPTR(cols);
60095373324SBarry Smith         for ( i=0; i<ai[m]; i++ ) {cols[i] = aij->garray[aj[i]-1];}
60195373324SBarry Smith         for ( i=0; i<m; i++ ) {
60295373324SBarry Smith           ierr = MatSetValues(A,1,&row,ai[i+1]-ai[i],cols,a,InsertValues);
60395373324SBarry Smith           CHKERR(ierr);
60495373324SBarry Smith           row++; a += ai[i+1]-ai[i]; cols += ai[i+1]-ai[i];
60595373324SBarry Smith         }
60695373324SBarry Smith         FREE(ct);
60795373324SBarry Smith         ierr = MatBeginAssembly(A); CHKERR(ierr);
60895373324SBarry Smith         ierr = MatEndAssembly(A); CHKERR(ierr);
60995373324SBarry Smith         if (!mytid) {
61095373324SBarry Smith           ierr = MatView(((Mat_MPIAIJ*)(A->data))->A,viewer); CHKERR(ierr);
61195373324SBarry Smith         }
61295373324SBarry Smith         ierr = MatDestroy(A); CHKERR(ierr);
61395373324SBarry Smith       }
61495373324SBarry Smith     }
615d13ab20cSBarry Smith   }
6161eb62cbbSBarry Smith   return 0;
6171eb62cbbSBarry Smith }
6181eb62cbbSBarry Smith 
619d3c9fed9SLois Curfman McInnes extern int MatMarkDiag_AIJ(Mat_AIJ  *);
6201eb62cbbSBarry Smith /*
6211eb62cbbSBarry Smith     This has to provide several versions.
6221eb62cbbSBarry Smith 
6231eb62cbbSBarry Smith      1) per sequential
6241eb62cbbSBarry Smith      2) a) use only local smoothing updating outer values only once.
6251eb62cbbSBarry Smith         b) local smoothing updating outer values each inner iteration
626d6dfbf8fSBarry Smith      3) color updating out values betwen colors.
6271eb62cbbSBarry Smith */
62844a69424SLois Curfman McInnes static int MatRelax_MPIAIJ(Mat matin,Vec bb,double omega,int flag,double shift,
6298a729477SBarry Smith                         int its,Vec xx)
6308a729477SBarry Smith {
63144a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
632d6dfbf8fSBarry Smith   Mat        AA = mat->A, BB = mat->B;
63344a69424SLois Curfman McInnes   Mat_AIJ    *A = (Mat_AIJ *) AA->data, *B = (Mat_AIJ *)BB->data;
6346abc6512SBarry Smith   Scalar     zero = 0.0,*b,*x,*xs,*ls,d,*v,sum,scale,*t,*ts;
6356abc6512SBarry Smith   int        ierr,*idx, *diag;
6366abc6512SBarry Smith   int        n = mat->n, m = mat->m, i;
637da3a660dSBarry Smith   Vec        tt;
6388a729477SBarry Smith 
63944a69424SLois Curfman McInnes   if (!mat->assembled) SETERR(1,"MatRelax_MPIAIJ: must assemble matrix first");
6401eb62cbbSBarry Smith 
641d6dfbf8fSBarry Smith   VecGetArray(xx,&x); VecGetArray(bb,&b); VecGetArray(mat->lvec,&ls);
642d6dfbf8fSBarry Smith   xs = x -1; /* shift by one for index start of 1 */
643da3a660dSBarry Smith   ls--;
644d3c9fed9SLois Curfman McInnes   if (!A->diag) {if ((ierr = MatMarkDiag_AIJ(A))) return ierr;}
645d6dfbf8fSBarry Smith   diag = A->diag;
646acb40c82SBarry Smith   if (flag == SOR_APPLY_UPPER || flag == SOR_APPLY_LOWER) {
647acb40c82SBarry Smith     SETERR(1,"That option not yet support for parallel AIJ matrices");
648acb40c82SBarry Smith   }
649da3a660dSBarry Smith   if (flag & SOR_EISENSTAT) {
650da3a660dSBarry Smith     /* Let  A = L + U + D; where L is lower trianglar,
651da3a660dSBarry Smith     U is upper triangular, E is diagonal; This routine applies
652da3a660dSBarry Smith 
653da3a660dSBarry Smith             (L + E)^{-1} A (U + E)^{-1}
654da3a660dSBarry Smith 
655da3a660dSBarry Smith     to a vector efficiently using Eisenstat's trick. This is for
656da3a660dSBarry Smith     the case of SSOR preconditioner, so E is D/omega where omega
657da3a660dSBarry Smith     is the relaxation factor.
658da3a660dSBarry Smith     */
659da3a660dSBarry Smith     ierr = VecCreate(xx,&tt); CHKERR(ierr);
660da3a660dSBarry Smith     VecGetArray(tt,&t);
661da3a660dSBarry Smith     scale = (2.0/omega) - 1.0;
662da3a660dSBarry Smith     /*  x = (E + U)^{-1} b */
663da3a660dSBarry Smith     VecSet(&zero,mat->lvec);
664da3a660dSBarry Smith     ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp,
665da3a660dSBarry Smith                               mat->Mvctx); CHKERR(ierr);
666da3a660dSBarry Smith     for ( i=m-1; i>-1; i-- ) {
667da3a660dSBarry Smith       n    = A->i[i+1] - diag[i] - 1;
668da3a660dSBarry Smith       idx  = A->j + diag[i];
669da3a660dSBarry Smith       v    = A->a + diag[i];
670da3a660dSBarry Smith       sum  = b[i];
671da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,xs,v,idx,n);
672da3a660dSBarry Smith       d    = shift + A->a[diag[i]-1];
673da3a660dSBarry Smith       n    = B->i[i+1] - B->i[i];
674da3a660dSBarry Smith       idx  = B->j + B->i[i] - 1;
675da3a660dSBarry Smith       v    = B->a + B->i[i] - 1;
676da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,ls,v,idx,n);
677da3a660dSBarry Smith       x[i] = omega*(sum/d);
678da3a660dSBarry Smith     }
679da3a660dSBarry Smith     ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp,
680da3a660dSBarry Smith                             mat->Mvctx); CHKERR(ierr);
681da3a660dSBarry Smith 
682da3a660dSBarry Smith     /*  t = b - (2*E - D)x */
683da3a660dSBarry Smith     v = A->a;
684da3a660dSBarry Smith     for ( i=0; i<m; i++ ) { t[i] = b[i] - scale*(v[*diag++ - 1])*x[i]; }
685da3a660dSBarry Smith 
686da3a660dSBarry Smith     /*  t = (E + L)^{-1}t */
687da3a660dSBarry Smith     ts = t - 1; /* shifted by one for index start of a or mat->j*/
688da3a660dSBarry Smith     diag = A->diag;
689da3a660dSBarry Smith     VecSet(&zero,mat->lvec);
690da3a660dSBarry Smith     ierr = VecPipelineBegin(tt,0,mat->lvec,0,InsertValues,PipelineDown,
691da3a660dSBarry Smith                                                  mat->Mvctx); CHKERR(ierr);
692da3a660dSBarry Smith     for ( i=0; i<m; i++ ) {
693da3a660dSBarry Smith       n    = diag[i] - A->i[i];
694da3a660dSBarry Smith       idx  = A->j + A->i[i] - 1;
695da3a660dSBarry Smith       v    = A->a + A->i[i] - 1;
696da3a660dSBarry Smith       sum  = t[i];
697da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,ts,v,idx,n);
698da3a660dSBarry Smith       d    = shift + A->a[diag[i]-1];
699da3a660dSBarry Smith       n    = B->i[i+1] - B->i[i];
700da3a660dSBarry Smith       idx  = B->j + B->i[i] - 1;
701da3a660dSBarry Smith       v    = B->a + B->i[i] - 1;
702da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,ls,v,idx,n);
703da3a660dSBarry Smith       t[i] = omega*(sum/d);
704da3a660dSBarry Smith     }
705da3a660dSBarry Smith     ierr = VecPipelineEnd(tt,0,mat->lvec,0,InsertValues,PipelineDown,
706da3a660dSBarry Smith                                                     mat->Mvctx); CHKERR(ierr);
707da3a660dSBarry Smith     /*  x = x + t */
708da3a660dSBarry Smith     for ( i=0; i<m; i++ ) { x[i] += t[i]; }
709da3a660dSBarry Smith     VecDestroy(tt);
710da3a660dSBarry Smith     return 0;
711da3a660dSBarry Smith   }
712da3a660dSBarry Smith 
7131eb62cbbSBarry Smith 
714d6dfbf8fSBarry Smith   if ((flag & SOR_SYMMETRIC_SWEEP) == SOR_SYMMETRIC_SWEEP){
715da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
716da3a660dSBarry Smith       VecSet(&zero,mat->lvec); VecSet(&zero,xx);
717da3a660dSBarry Smith     }
718da3a660dSBarry Smith     else {
719d6dfbf8fSBarry Smith       ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx);
720d6dfbf8fSBarry Smith       CHKERR(ierr);
721d6dfbf8fSBarry Smith       ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx);
722d6dfbf8fSBarry Smith       CHKERR(ierr);
723da3a660dSBarry Smith     }
724d6dfbf8fSBarry Smith     while (its--) {
725d6dfbf8fSBarry Smith       /* go down through the rows */
726d6dfbf8fSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown,
727d6dfbf8fSBarry Smith                               mat->Mvctx); CHKERR(ierr);
728d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
729d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
730d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
731d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
732d6dfbf8fSBarry Smith         sum  = b[i];
733d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
734d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
735d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
736d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
737d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
738d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
739d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
740d6dfbf8fSBarry Smith       }
741d6dfbf8fSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown,
742d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
743d6dfbf8fSBarry Smith       /* come up through the rows */
744d6dfbf8fSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp,
745d6dfbf8fSBarry Smith                               mat->Mvctx); CHKERR(ierr);
746d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
747d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
748d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
749d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
750d6dfbf8fSBarry Smith         sum  = b[i];
751d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
752d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
753d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
754d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
755d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
756d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
757d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
758d6dfbf8fSBarry Smith       }
759d6dfbf8fSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp,
760d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
761d6dfbf8fSBarry Smith     }
762d6dfbf8fSBarry Smith   }
763d6dfbf8fSBarry Smith   else if (flag & SOR_FORWARD_SWEEP){
764da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
765da3a660dSBarry Smith       VecSet(&zero,mat->lvec);
766da3a660dSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown,
767da3a660dSBarry Smith                               mat->Mvctx); CHKERR(ierr);
768da3a660dSBarry Smith       for ( i=0; i<m; i++ ) {
769da3a660dSBarry Smith         n    = diag[i] - A->i[i];
770da3a660dSBarry Smith         idx  = A->j + A->i[i] - 1;
771da3a660dSBarry Smith         v    = A->a + A->i[i] - 1;
772da3a660dSBarry Smith         sum  = b[i];
773da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
774da3a660dSBarry Smith         d    = shift + A->a[diag[i]-1];
775da3a660dSBarry Smith         n    = B->i[i+1] - B->i[i];
776da3a660dSBarry Smith         idx  = B->j + B->i[i] - 1;
777da3a660dSBarry Smith         v    = B->a + B->i[i] - 1;
778da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
779da3a660dSBarry Smith         x[i] = omega*(sum/d);
780da3a660dSBarry Smith       }
781da3a660dSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown,
782da3a660dSBarry Smith                             mat->Mvctx); CHKERR(ierr);
783da3a660dSBarry Smith       its--;
784da3a660dSBarry Smith     }
785d6dfbf8fSBarry Smith     while (its--) {
786d6dfbf8fSBarry Smith       ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx);
787d6dfbf8fSBarry Smith       CHKERR(ierr);
788d6dfbf8fSBarry Smith       ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx);
789d6dfbf8fSBarry Smith       CHKERR(ierr);
790d6dfbf8fSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown,
791d6dfbf8fSBarry Smith                               mat->Mvctx); CHKERR(ierr);
792d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
793d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
794d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
795d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
796d6dfbf8fSBarry Smith         sum  = b[i];
797d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
798d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
799d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
800d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
801d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
802d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
803d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
804d6dfbf8fSBarry Smith       }
805d6dfbf8fSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown,
806d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
807d6dfbf8fSBarry Smith     }
808d6dfbf8fSBarry Smith   }
809d6dfbf8fSBarry Smith   else if (flag & SOR_BACKWARD_SWEEP){
810da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
811da3a660dSBarry Smith       VecSet(&zero,mat->lvec);
812da3a660dSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp,
813da3a660dSBarry Smith                               mat->Mvctx); CHKERR(ierr);
814da3a660dSBarry Smith       for ( i=m-1; i>-1; i-- ) {
815da3a660dSBarry Smith         n    = A->i[i+1] - diag[i] - 1;
816da3a660dSBarry Smith         idx  = A->j + diag[i];
817da3a660dSBarry Smith         v    = A->a + diag[i];
818da3a660dSBarry Smith         sum  = b[i];
819da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
820da3a660dSBarry Smith         d    = shift + A->a[diag[i]-1];
821da3a660dSBarry Smith         n    = B->i[i+1] - B->i[i];
822da3a660dSBarry Smith         idx  = B->j + B->i[i] - 1;
823da3a660dSBarry Smith         v    = B->a + B->i[i] - 1;
824da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
825da3a660dSBarry Smith         x[i] = omega*(sum/d);
826da3a660dSBarry Smith       }
827da3a660dSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp,
828da3a660dSBarry Smith                             mat->Mvctx); CHKERR(ierr);
829da3a660dSBarry Smith       its--;
830da3a660dSBarry Smith     }
831d6dfbf8fSBarry Smith     while (its--) {
832d6dfbf8fSBarry Smith       ierr = VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterDown,
833d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
834d6dfbf8fSBarry Smith       ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterDown,
835d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
836d6dfbf8fSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp,
837d6dfbf8fSBarry Smith                               mat->Mvctx); CHKERR(ierr);
838d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
839d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
840d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
841d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
842d6dfbf8fSBarry Smith         sum  = b[i];
843d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
844d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
845d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
846d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
847d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
848d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
849d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
850d6dfbf8fSBarry Smith       }
851d6dfbf8fSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp,
852d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
853d6dfbf8fSBarry Smith     }
854d6dfbf8fSBarry Smith   }
855d6dfbf8fSBarry Smith   else if ((flag & SOR_LOCAL_SYMMETRIC_SWEEP) == SOR_LOCAL_SYMMETRIC_SWEEP){
856da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
857da3a660dSBarry Smith       return MatRelax(mat->A,bb,omega,flag,shift,its,xx);
858da3a660dSBarry Smith     }
859d6dfbf8fSBarry Smith     ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx);
860d6dfbf8fSBarry Smith     CHKERR(ierr);
861d6dfbf8fSBarry Smith     ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx);
862d6dfbf8fSBarry Smith     CHKERR(ierr);
863d6dfbf8fSBarry Smith     while (its--) {
864d6dfbf8fSBarry Smith       /* go down through the rows */
865d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
866d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
867d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
868d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
869d6dfbf8fSBarry Smith         sum  = b[i];
870d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
871d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
872d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
873d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
874d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
875d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
876d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
877d6dfbf8fSBarry Smith       }
878d6dfbf8fSBarry Smith       /* come up through the rows */
879d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
880d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
881d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
882d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
883d6dfbf8fSBarry Smith         sum  = b[i];
884d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
885d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
886d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
887d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
888d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
889d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
890d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
891d6dfbf8fSBarry Smith       }
892d6dfbf8fSBarry Smith     }
893d6dfbf8fSBarry Smith   }
894d6dfbf8fSBarry Smith   else if (flag & SOR_LOCAL_FORWARD_SWEEP){
895da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
896da3a660dSBarry Smith       return MatRelax(mat->A,bb,omega,flag,shift,its,xx);
897da3a660dSBarry Smith     }
898d6dfbf8fSBarry Smith     ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx);
899d6dfbf8fSBarry Smith     CHKERR(ierr);
900d6dfbf8fSBarry Smith     ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx);
901d6dfbf8fSBarry Smith     CHKERR(ierr);
902d6dfbf8fSBarry Smith     while (its--) {
903d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
904d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
905d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
906d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
907d6dfbf8fSBarry Smith         sum  = b[i];
908d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
909d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
910d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
911d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
912d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
913d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
914d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
915d6dfbf8fSBarry Smith       }
916d6dfbf8fSBarry Smith     }
917d6dfbf8fSBarry Smith   }
918d6dfbf8fSBarry Smith   else if (flag & SOR_LOCAL_BACKWARD_SWEEP){
919da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
920da3a660dSBarry Smith       return MatRelax(mat->A,bb,omega,flag,shift,its,xx);
921da3a660dSBarry Smith     }
922d6dfbf8fSBarry Smith     ierr = VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll,
923d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
924d6dfbf8fSBarry Smith     ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll,
925d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
926d6dfbf8fSBarry Smith     while (its--) {
927d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
928d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
929d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
930d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
931d6dfbf8fSBarry Smith         sum  = b[i];
932d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
933d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
934d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
935d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
936d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
937d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
938d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
939d6dfbf8fSBarry Smith       }
940d6dfbf8fSBarry Smith     }
941d6dfbf8fSBarry Smith   }
9428a729477SBarry Smith   return 0;
9438a729477SBarry Smith }
944a66be287SLois Curfman McInnes 
945a66be287SLois Curfman McInnes static int MatGetInfo_MPIAIJ(Mat matin,int flag,int *nz,int *nzalloc,int *mem)
946a66be287SLois Curfman McInnes {
947a66be287SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
948a66be287SLois Curfman McInnes   Mat        A = mat->A, B = mat->B;
949a66be287SLois Curfman McInnes   int        ierr, isend[3], irecv[3], nzA, nzallocA, memA;
950a66be287SLois Curfman McInnes 
951a66be287SLois Curfman McInnes   ierr = MatGetInfo(A,MAT_LOCAL,&nzA,&nzallocA,&memA); CHKERR(ierr);
952a66be287SLois Curfman McInnes   ierr = MatGetInfo(B,MAT_LOCAL,&isend[0],&isend[1],&isend[2]); CHKERR(ierr);
953a66be287SLois Curfman McInnes   isend[0] += nzA; isend[1] += nzallocA; isend[2] += memA;
954a66be287SLois Curfman McInnes   if (flag == MAT_LOCAL) {
955a66be287SLois Curfman McInnes     *nz = isend[0]; *nzalloc = isend[1]; *mem = isend[2];
956a66be287SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_MAX) {
957a66be287SLois Curfman McInnes     MPI_Allreduce((void *) isend,(void *) irecv,3,MPI_INT,MPI_MAX,matin->comm);
958a66be287SLois Curfman McInnes     *nz = irecv[0]; *nzalloc = irecv[1]; *mem = irecv[2];
959a66be287SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_SUM) {
960a66be287SLois Curfman McInnes     MPI_Allreduce((void *) isend,(void *) irecv,3,MPI_INT,MPI_SUM,matin->comm);
961a66be287SLois Curfman McInnes     *nz = irecv[0]; *nzalloc = irecv[1]; *mem = irecv[2];
962a66be287SLois Curfman McInnes   }
963a66be287SLois Curfman McInnes   return 0;
964a66be287SLois Curfman McInnes }
965a66be287SLois Curfman McInnes 
966d1710a03SLois Curfman McInnes static int MatSetOption_MPIAIJ(Mat aijin,int op)
967c74985f6SBarry Smith {
96844a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
969c74985f6SBarry Smith 
970c74985f6SBarry Smith   if      (op == NO_NEW_NONZERO_LOCATIONS)  {
971c74985f6SBarry Smith     MatSetOption(aij->A,op);
972c74985f6SBarry Smith     MatSetOption(aij->B,op);
973c74985f6SBarry Smith   }
974c74985f6SBarry Smith   else if (op == YES_NEW_NONZERO_LOCATIONS) {
975c74985f6SBarry Smith     MatSetOption(aij->A,op);
976c74985f6SBarry Smith     MatSetOption(aij->B,op);
977c74985f6SBarry Smith   }
978c74985f6SBarry Smith   else if (op == COLUMN_ORIENTED) SETERR(1,"Column oriented not supported");
979c74985f6SBarry Smith   return 0;
980c74985f6SBarry Smith }
981c74985f6SBarry Smith 
982d1710a03SLois Curfman McInnes static int MatGetSize_MPIAIJ(Mat matin,int *m,int *n)
983c74985f6SBarry Smith {
98444a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
985c74985f6SBarry Smith   *m = mat->M; *n = mat->N;
986c74985f6SBarry Smith   return 0;
987c74985f6SBarry Smith }
988c74985f6SBarry Smith 
989d1710a03SLois Curfman McInnes static int MatGetLocalSize_MPIAIJ(Mat matin,int *m,int *n)
990c74985f6SBarry Smith {
99144a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
992c74985f6SBarry Smith   *m = mat->m; *n = mat->n;
993c74985f6SBarry Smith   return 0;
994c74985f6SBarry Smith }
995c74985f6SBarry Smith 
996d1710a03SLois Curfman McInnes static int MatGetOwnershipRange_MPIAIJ(Mat matin,int *m,int *n)
997c74985f6SBarry Smith {
99844a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
999c74985f6SBarry Smith   *m = mat->rstart; *n = mat->rend;
1000c74985f6SBarry Smith   return 0;
1001c74985f6SBarry Smith }
1002c74985f6SBarry Smith 
100339e00950SLois Curfman McInnes static int MatGetRow_MPIAIJ(Mat matin,int row,int *nz,int **idx,Scalar **v)
100439e00950SLois Curfman McInnes {
1005154123eaSLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
1006154123eaSLois Curfman McInnes   Scalar     *vworkA, *vworkB, **pvA, **pvB;
1007154123eaSLois Curfman McInnes   int        i, ierr, *cworkA, *cworkB, **pcA, **pcB, cstart = mat->cstart;
1008154123eaSLois Curfman McInnes   int        nztot, nzA, nzB, lrow, rstart = mat->rstart, rend = mat->rend;
100939e00950SLois Curfman McInnes 
1010154123eaSLois Curfman McInnes   if (!mat->assembled)
101139e00950SLois Curfman McInnes     SETERR(1,"MatGetRow_MPIAIJ: Must assemble matrix first.");
101239e00950SLois Curfman McInnes   if (row < rstart || row >= rend)
1013abc0e9e4SLois Curfman McInnes     SETERR(1,"MatGetRow_MPIAIJ: Currently you can get only local rows.")
1014abc0e9e4SLois Curfman McInnes   lrow = row - rstart;
101539e00950SLois Curfman McInnes 
1016154123eaSLois Curfman McInnes   pvA = &vworkA; pcA = &cworkA; pvB = &vworkB; pcB = &cworkB;
1017154123eaSLois Curfman McInnes   if (!v)   {pvA = 0; pvB = 0;}
1018154123eaSLois Curfman McInnes   if (!idx) {pcA = 0; if (!v) pcB = 0;}
1019154123eaSLois Curfman McInnes   ierr = MatGetRow(mat->A,lrow,&nzA,pcA,pvA); CHKERR(ierr);
1020154123eaSLois Curfman McInnes   ierr = MatGetRow(mat->B,lrow,&nzB,pcB,pvB); CHKERR(ierr);
1021154123eaSLois Curfman McInnes   nztot = nzA + nzB;
1022154123eaSLois Curfman McInnes 
1023154123eaSLois Curfman McInnes   if (v  || idx) {
1024154123eaSLois Curfman McInnes     if (nztot) {
1025154123eaSLois Curfman McInnes       /* Sort by increasing column numbers, assuming A and B already sorted */
1026154123eaSLois Curfman McInnes       int imark, imark2;
1027154123eaSLois Curfman McInnes       for (i=0; i<nzB; i++) cworkB[i] = mat->garray[cworkB[i]];
1028154123eaSLois Curfman McInnes       if (v) {
102939e00950SLois Curfman McInnes         *v = (Scalar *) MALLOC( (nztot)*sizeof(Scalar) ); CHKPTR(*v);
103039e00950SLois Curfman McInnes         for ( i=0; i<nzB; i++ ) {
1031154123eaSLois Curfman McInnes           if (cworkB[i] < cstart)   (*v)[i] = vworkB[i];
1032154123eaSLois Curfman McInnes           else break;
1033154123eaSLois Curfman McInnes         }
1034154123eaSLois Curfman McInnes         imark = i;
1035154123eaSLois Curfman McInnes         for ( i=0; i<nzA; i++ )     (*v)[imark+i] = vworkA[i];
1036154123eaSLois Curfman McInnes         imark2 = imark+nzA;
1037154123eaSLois Curfman McInnes         for ( i=imark; i<nzB; i++ ) (*v)[imark2+i] = vworkB[i];
1038154123eaSLois Curfman McInnes       }
1039154123eaSLois Curfman McInnes       if (idx) {
1040154123eaSLois Curfman McInnes         *idx = (int *) MALLOC( (nztot)*sizeof(int) ); CHKPTR(*idx);
1041154123eaSLois Curfman McInnes         for (i=0; i<nzA; i++) cworkA[i] += cstart;
1042154123eaSLois Curfman McInnes         for ( i=0; i<nzB; i++ ) {
1043154123eaSLois Curfman McInnes           if (cworkB[i] < cstart)   (*idx)[i] = cworkB[i];
1044154123eaSLois Curfman McInnes           else break;
1045154123eaSLois Curfman McInnes         }
1046154123eaSLois Curfman McInnes         imark = i;
1047154123eaSLois Curfman McInnes         for ( i=0; i<nzA; i++ )     (*idx)[imark+i] = cworkA[i];
1048154123eaSLois Curfman McInnes         imark2 = imark+nzA;
1049154123eaSLois Curfman McInnes         for ( i=imark; i<nzB; i++ ) (*idx)[imark2+i] = cworkB[i];
105039e00950SLois Curfman McInnes       }
105139e00950SLois Curfman McInnes     }
105239e00950SLois Curfman McInnes     else {*idx = 0; *v=0;}
1053154123eaSLois Curfman McInnes   }
105439e00950SLois Curfman McInnes   *nz = nztot;
1055154123eaSLois Curfman McInnes   ierr = MatRestoreRow(mat->A,lrow,&nzA,pcA,pvA); CHKERR(ierr);
1056154123eaSLois Curfman McInnes   ierr = MatRestoreRow(mat->B,lrow,&nzB,pcB,pvB); CHKERR(ierr);
105739e00950SLois Curfman McInnes   return 0;
105839e00950SLois Curfman McInnes }
105939e00950SLois Curfman McInnes 
106039e00950SLois Curfman McInnes static int MatRestoreRow_MPIAIJ(Mat mat,int row,int *nz,int **idx,Scalar **v)
106139e00950SLois Curfman McInnes {
1062154123eaSLois Curfman McInnes   if (idx) FREE(*idx);
1063154123eaSLois Curfman McInnes   if (v) FREE(*v);
106439e00950SLois Curfman McInnes   return 0;
106539e00950SLois Curfman McInnes }
106639e00950SLois Curfman McInnes 
106744a69424SLois Curfman McInnes static int MatCopy_MPIAIJ(Mat,Mat *);
106844a69424SLois Curfman McInnes extern int MatConvert_MPIAIJ(Mat,MATTYPE,Mat *);
1069d6dfbf8fSBarry Smith 
10708a729477SBarry Smith /* -------------------------------------------------------------------*/
1071*2ee70a88SLois Curfman McInnes static struct _MatOps MatOps = {MatSetValues_MPIAIJ,
107239e00950SLois Curfman McInnes        MatGetRow_MPIAIJ,MatRestoreRow_MPIAIJ,
107344a69424SLois Curfman McInnes        MatMult_MPIAIJ,MatMultAdd_MPIAIJ,
107444a69424SLois Curfman McInnes        MatMultTrans_MPIAIJ,MatMultTransAdd_MPIAIJ,
10751eb62cbbSBarry Smith        0,0,0,0,
10768a729477SBarry Smith        0,0,
107744a69424SLois Curfman McInnes        MatRelax_MPIAIJ,
10788a729477SBarry Smith        0,
1079a66be287SLois Curfman McInnes        MatGetInfo_MPIAIJ,0,
108044a69424SLois Curfman McInnes        MatCopy_MPIAIJ,
1081d1710a03SLois Curfman McInnes        MatGetDiagonal_MPIAIJ,0,0,
108244a69424SLois Curfman McInnes        MatBeginAssemble_MPIAIJ,MatEndAssemble_MPIAIJ,
10831eb62cbbSBarry Smith        0,
1084*2ee70a88SLois Curfman McInnes        MatSetOption_MPIAIJ,MatZeroEntries_MPIAIJ,MatZeroRows_MPIAIJ,0,
1085c74985f6SBarry Smith        0,0,0,0,
1086d1710a03SLois Curfman McInnes        MatGetSize_MPIAIJ,MatGetLocalSize_MPIAIJ,MatGetOwnershipRange_MPIAIJ,
108777915d1cSLois Curfman McInnes        0,0,
108844a69424SLois Curfman McInnes        0,MatConvert_MPIAIJ };
10898a729477SBarry Smith 
10908a729477SBarry Smith /*@
10918a729477SBarry Smith 
10921eb62cbbSBarry Smith       MatCreateMPIAIJ - Creates a sparse parallel matrix
10931eb62cbbSBarry Smith                                  in AIJ format.
10948a729477SBarry Smith 
10958a729477SBarry Smith   Input Parameters:
10961eb62cbbSBarry Smith .   comm - MPI communicator
10971eb62cbbSBarry Smith .   m,n - number of local rows and columns (or -1 to have calculated)
10981eb62cbbSBarry Smith .   M,N - global rows and columns (or -1 to have calculated)
10991eb62cbbSBarry Smith .   d_nz - total number nonzeros in diagonal portion of matrix
11001eb62cbbSBarry Smith .   d_nzz - number of nonzeros per row in diagonal portion of matrix or null
11018a729477SBarry Smith .           You must leave room for the diagonal entry even if it is zero.
11021eb62cbbSBarry Smith .   o_nz - total number nonzeros in off-diagonal portion of matrix
11031eb62cbbSBarry Smith .   o_nzz - number of nonzeros per row in off-diagonal portion of matrix
11041eb62cbbSBarry Smith .           or null. You must have at least one nonzero per row.
11058a729477SBarry Smith 
11068a729477SBarry Smith   Output parameters:
11078a729477SBarry Smith .  newmat - the matrix
11088a729477SBarry Smith 
11091eb62cbbSBarry Smith   Keywords: matrix, aij, compressed row, sparse, parallel
11108a729477SBarry Smith @*/
11111eb62cbbSBarry Smith int MatCreateMPIAIJ(MPI_Comm comm,int m,int n,int M,int N,
11121eb62cbbSBarry Smith                  int d_nz,int *d_nnz, int o_nz,int *o_nnz,Mat *newmat)
11138a729477SBarry Smith {
11148a729477SBarry Smith   Mat          mat;
111544a69424SLois Curfman McInnes   Mat_MPIAIJ   *aij;
11166abc6512SBarry Smith   int          ierr, i,sum[2],work[2];
11178a729477SBarry Smith   *newmat         = 0;
111844a69424SLois Curfman McInnes   PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATMPIAIJ,comm);
1119a5a9c739SBarry Smith   PLogObjectCreate(mat);
112044a69424SLois Curfman McInnes   mat->data       = (void *) (aij = NEW(Mat_MPIAIJ)); CHKPTR(aij);
11218a729477SBarry Smith   mat->ops        = &MatOps;
112244a69424SLois Curfman McInnes   mat->destroy    = MatDestroy_MPIAIJ;
112344a69424SLois Curfman McInnes   mat->view       = MatView_MPIAIJ;
11248a729477SBarry Smith   mat->factor     = 0;
11258a729477SBarry Smith   mat->row        = 0;
11268a729477SBarry Smith   mat->col        = 0;
1127d6dfbf8fSBarry Smith 
1128d6dfbf8fSBarry Smith   mat->comm       = comm;
11291eb62cbbSBarry Smith   aij->insertmode = NotSetValues;
11301eb62cbbSBarry Smith   MPI_Comm_rank(comm,&aij->mytid);
11311eb62cbbSBarry Smith   MPI_Comm_size(comm,&aij->numtids);
11321eb62cbbSBarry Smith 
11331eb62cbbSBarry Smith   if (M == -1 || N == -1) {
11341eb62cbbSBarry Smith     work[0] = m; work[1] = n;
1135d6dfbf8fSBarry Smith     MPI_Allreduce((void *) work,(void *) sum,2,MPI_INT,MPI_SUM,comm );
11361eb62cbbSBarry Smith     if (M == -1) M = sum[0];
11371eb62cbbSBarry Smith     if (N == -1) N = sum[1];
11381eb62cbbSBarry Smith   }
11391eb62cbbSBarry Smith   if (m == -1) {m = M/aij->numtids + ((M % aij->numtids) > aij->mytid);}
11401eb62cbbSBarry Smith   if (n == -1) {n = N/aij->numtids + ((N % aij->numtids) > aij->mytid);}
11418a729477SBarry Smith   aij->m       = m;
11428a729477SBarry Smith   aij->n       = n;
11431eb62cbbSBarry Smith   aij->N       = N;
11441eb62cbbSBarry Smith   aij->M       = M;
11451eb62cbbSBarry Smith 
11461eb62cbbSBarry Smith   /* build local table of row and column ownerships */
11471eb62cbbSBarry Smith   aij->rowners = (int *) MALLOC(2*(aij->numtids+2)*sizeof(int));
11481eb62cbbSBarry Smith   CHKPTR(aij->rowners);
11491eb62cbbSBarry Smith   aij->cowners = aij->rowners + aij->numtids + 1;
11501eb62cbbSBarry Smith   MPI_Allgather(&m,1,MPI_INT,aij->rowners+1,1,MPI_INT,comm);
11511eb62cbbSBarry Smith   aij->rowners[0] = 0;
11521eb62cbbSBarry Smith   for ( i=2; i<=aij->numtids; i++ ) {
11531eb62cbbSBarry Smith     aij->rowners[i] += aij->rowners[i-1];
11548a729477SBarry Smith   }
11551eb62cbbSBarry Smith   aij->rstart = aij->rowners[aij->mytid];
11561eb62cbbSBarry Smith   aij->rend   = aij->rowners[aij->mytid+1];
11571eb62cbbSBarry Smith   MPI_Allgather(&n,1,MPI_INT,aij->cowners+1,1,MPI_INT,comm);
11581eb62cbbSBarry Smith   aij->cowners[0] = 0;
11591eb62cbbSBarry Smith   for ( i=2; i<=aij->numtids; i++ ) {
11601eb62cbbSBarry Smith     aij->cowners[i] += aij->cowners[i-1];
11618a729477SBarry Smith   }
11621eb62cbbSBarry Smith   aij->cstart = aij->cowners[aij->mytid];
11631eb62cbbSBarry Smith   aij->cend   = aij->cowners[aij->mytid+1];
11648a729477SBarry Smith 
11658a729477SBarry Smith 
11661eb62cbbSBarry Smith   ierr = MatCreateSequentialAIJ(m,n,d_nz,d_nnz,&aij->A); CHKERR(ierr);
1167a5a9c739SBarry Smith   PLogObjectParent(mat,aij->A);
11681eb62cbbSBarry Smith   ierr = MatCreateSequentialAIJ(m,N,o_nz,o_nnz,&aij->B); CHKERR(ierr);
1169a5a9c739SBarry Smith   PLogObjectParent(mat,aij->B);
11708a729477SBarry Smith 
11711eb62cbbSBarry Smith   /* build cache for off array entries formed */
11721eb62cbbSBarry Smith   aij->stash.nmax = CHUNCKSIZE; /* completely arbratray number */
11731eb62cbbSBarry Smith   aij->stash.n    = 0;
11741eb62cbbSBarry Smith   aij->stash.array = (Scalar *) MALLOC( aij->stash.nmax*(2*sizeof(int) +
11751eb62cbbSBarry Smith                             sizeof(Scalar))); CHKPTR(aij->stash.array);
11761eb62cbbSBarry Smith   aij->stash.idx = (int *) (aij->stash.array + aij->stash.nmax);
11771eb62cbbSBarry Smith   aij->stash.idy = (int *) (aij->stash.idx + aij->stash.nmax);
11789e25ed09SBarry Smith   aij->colmap    = 0;
11799e25ed09SBarry Smith   aij->garray    = 0;
11808a729477SBarry Smith 
11811eb62cbbSBarry Smith   /* stuff used for matrix vector multiply */
11821eb62cbbSBarry Smith   aij->lvec      = 0;
11831eb62cbbSBarry Smith   aij->Mvctx     = 0;
1184d6dfbf8fSBarry Smith   aij->assembled = 0;
1185*2ee70a88SLois Curfman McInnes   aij->bsinterf  = 0;
11868a729477SBarry Smith 
1187d6dfbf8fSBarry Smith   *newmat = mat;
1188d6dfbf8fSBarry Smith   return 0;
1189d6dfbf8fSBarry Smith }
1190c74985f6SBarry Smith 
119144a69424SLois Curfman McInnes static int MatCopy_MPIAIJ(Mat matin,Mat *newmat)
1192d6dfbf8fSBarry Smith {
1193d6dfbf8fSBarry Smith   Mat        mat;
119444a69424SLois Curfman McInnes   Mat_MPIAIJ *aij,*oldmat = (Mat_MPIAIJ *) matin->data;
1195*2ee70a88SLois Curfman McInnes   int        ierr, len;
1196d6dfbf8fSBarry Smith   *newmat      = 0;
1197d6dfbf8fSBarry Smith 
1198d6dfbf8fSBarry Smith   if (!oldmat->assembled) SETERR(1,"Cannot copy unassembled matrix");
119944a69424SLois Curfman McInnes   PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATMPIAIJ,matin->comm);
1200a5a9c739SBarry Smith   PLogObjectCreate(mat);
120144a69424SLois Curfman McInnes   mat->data       = (void *) (aij = NEW(Mat_MPIAIJ)); CHKPTR(aij);
1202d6dfbf8fSBarry Smith   mat->ops        = &MatOps;
120344a69424SLois Curfman McInnes   mat->destroy    = MatDestroy_MPIAIJ;
120444a69424SLois Curfman McInnes   mat->view       = MatView_MPIAIJ;
1205d6dfbf8fSBarry Smith   mat->factor     = matin->factor;
1206d6dfbf8fSBarry Smith   mat->row        = 0;
1207d6dfbf8fSBarry Smith   mat->col        = 0;
1208d6dfbf8fSBarry Smith 
1209d6dfbf8fSBarry Smith   aij->m          = oldmat->m;
1210d6dfbf8fSBarry Smith   aij->n          = oldmat->n;
1211d6dfbf8fSBarry Smith   aij->M          = oldmat->M;
1212d6dfbf8fSBarry Smith   aij->N          = oldmat->N;
1213d6dfbf8fSBarry Smith 
1214d6dfbf8fSBarry Smith   aij->assembled  = 1;
1215d6dfbf8fSBarry Smith   aij->rstart     = oldmat->rstart;
1216d6dfbf8fSBarry Smith   aij->rend       = oldmat->rend;
1217d6dfbf8fSBarry Smith   aij->cstart     = oldmat->cstart;
1218d6dfbf8fSBarry Smith   aij->cend       = oldmat->cend;
1219d6dfbf8fSBarry Smith   aij->numtids    = oldmat->numtids;
1220d6dfbf8fSBarry Smith   aij->mytid      = oldmat->mytid;
1221d6dfbf8fSBarry Smith   aij->insertmode = NotSetValues;
1222d6dfbf8fSBarry Smith 
1223d6dfbf8fSBarry Smith   aij->rowners        = (int *) MALLOC( (aij->numtids+1)*sizeof(int) );
1224d6dfbf8fSBarry Smith   CHKPTR(aij->rowners);
1225d6dfbf8fSBarry Smith   MEMCPY(aij->rowners,oldmat->rowners,(aij->numtids+1)*sizeof(int));
1226d6dfbf8fSBarry Smith   aij->stash.nmax     = 0;
1227d6dfbf8fSBarry Smith   aij->stash.n        = 0;
1228d6dfbf8fSBarry Smith   aij->stash.array    = 0;
1229*2ee70a88SLois Curfman McInnes   if (oldmat->colmap) {
1230*2ee70a88SLois Curfman McInnes     aij->colmap      = (int *) MALLOC( (aij->N)*sizeof(int) );
1231*2ee70a88SLois Curfman McInnes     CHKPTR(aij->colmap);
1232*2ee70a88SLois Curfman McInnes     MEMCPY(aij->colmap,oldmat->colmap,(aij->N)*sizeof(int));
1233*2ee70a88SLois Curfman McInnes   } else aij->colmap = 0;
1234*2ee70a88SLois Curfman McInnes     if (oldmat->garray && (len = ((Mat_AIJ *) (oldmat->B->data))->n)) {
1235*2ee70a88SLois Curfman McInnes     aij->garray      = (int *) MALLOC(len*sizeof(int) ); CHKPTR(aij->garray);
1236*2ee70a88SLois Curfman McInnes     MEMCPY(aij->garray,oldmat->garray,len*sizeof(int));
1237*2ee70a88SLois Curfman McInnes   } else aij->garray = 0;
1238d6dfbf8fSBarry Smith   mat->comm           = matin->comm;
1239*2ee70a88SLois Curfman McInnes   aij->bsinterf       = 0;
1240d6dfbf8fSBarry Smith 
1241d6dfbf8fSBarry Smith   ierr =  VecCreate(oldmat->lvec,&aij->lvec); CHKERR(ierr);
1242a5a9c739SBarry Smith   PLogObjectParent(mat,aij->lvec);
1243d6dfbf8fSBarry Smith   ierr =  VecScatterCtxCopy(oldmat->Mvctx,&aij->Mvctx); CHKERR(ierr);
1244a5a9c739SBarry Smith   PLogObjectParent(mat,aij->Mvctx);
1245d6dfbf8fSBarry Smith   ierr =  MatCopy(oldmat->A,&aij->A); CHKERR(ierr);
1246a5a9c739SBarry Smith   PLogObjectParent(mat,aij->A);
1247d6dfbf8fSBarry Smith   ierr =  MatCopy(oldmat->B,&aij->B); CHKERR(ierr);
1248a5a9c739SBarry Smith   PLogObjectParent(mat,aij->B);
12498a729477SBarry Smith   *newmat = mat;
12508a729477SBarry Smith   return 0;
12518a729477SBarry Smith }
1252