1cb512458SBarry Smith #ifndef lint 2*37fa93a5SLois Curfman McInnes static char vcid[] = "$Id: mpiaij.c,v 1.70 1995/08/24 22:28:22 bsmith Exp curfman $"; 3cb512458SBarry Smith #endif 48a729477SBarry Smith 51eb62cbbSBarry Smith #include "mpiaij.h" 68a729477SBarry Smith #include "vec/vecimpl.h" 7d6dfbf8fSBarry Smith #include "inline/spops.h" 88a729477SBarry Smith 99e25ed09SBarry Smith /* local utility routine that creates a mapping from the global column 109e25ed09SBarry Smith number to the local number in the off-diagonal part of the local 119e25ed09SBarry Smith storage of the matrix. This is done in a non scable way since the 129e25ed09SBarry Smith length of colmap equals the global matrix length. 139e25ed09SBarry Smith */ 14b7c46309SBarry Smith static int CreateColmap_Private(Mat mat) 159e25ed09SBarry Smith { 1644a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 1744a69424SLois Curfman McInnes Mat_AIJ *B = (Mat_AIJ*) aij->B->data; 189e25ed09SBarry Smith int n = B->n,i; 1978b31e54SBarry Smith aij->colmap = (int *) PETSCMALLOC(aij->N*sizeof(int));CHKPTRQ(aij->colmap); 20464493b3SBarry Smith PLogObjectMemory(mat,aij->N*sizeof(int)); 2178b31e54SBarry Smith PETSCMEMSET(aij->colmap,0,aij->N*sizeof(int)); 22abc0e9e4SLois Curfman McInnes for ( i=0; i<n; i++ ) aij->colmap[aij->garray[i]] = i+1; 239e25ed09SBarry Smith return 0; 249e25ed09SBarry Smith } 259e25ed09SBarry Smith 262493cbb0SBarry Smith extern int DisAssemble_MPIAIJ(Mat); 272493cbb0SBarry Smith 2851c98ccdSLois Curfman McInnes static int MatGetReordering_MPIAIJ(Mat mat,MatOrdering type,IS *rperm,IS *cperm) 29299609e3SLois Curfman McInnes { 30299609e3SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 31299609e3SLois Curfman McInnes int ierr; 32299609e3SLois Curfman McInnes if (aij->numtids == 1) { 3351c98ccdSLois Curfman McInnes ierr = MatGetReordering(aij->A,type,rperm,cperm); CHKERRQ(ierr); 34299609e3SLois Curfman McInnes } else 35bbb6d6a8SBarry Smith SETERRQ(1,"MatGetReordering_MPIAIJ: not yet supported in parallel"); 36299609e3SLois Curfman McInnes return 0; 37299609e3SLois Curfman McInnes } 38299609e3SLois Curfman McInnes 392ee70a88SLois Curfman McInnes static int MatSetValues_MPIAIJ(Mat mat,int m,int *idxm,int n, 401eb62cbbSBarry Smith int *idxn,Scalar *v,InsertMode addv) 418a729477SBarry Smith { 4244a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 431eb62cbbSBarry Smith int ierr,i,j, rstart = aij->rstart, rend = aij->rend; 441eb62cbbSBarry Smith int cstart = aij->cstart, cend = aij->cend,row,col; 458a729477SBarry Smith 4607a0e7adSLois Curfman McInnes if (aij->insertmode != NOTSETVALUES && aij->insertmode != addv) { 47bbb6d6a8SBarry Smith SETERRQ(1,"MatSetValues_MPIAIJ:You cannot mix inserts and adds"); 488a729477SBarry Smith } 491eb62cbbSBarry Smith aij->insertmode = addv; 508a729477SBarry Smith for ( i=0; i<m; i++ ) { 51bbb6d6a8SBarry Smith if (idxm[i] < 0) SETERRQ(1,"MatSetValues_MPIAIJ:Negative row"); 52bbb6d6a8SBarry Smith if (idxm[i] >= aij->M) SETERRQ(1,"MatSetValues_MPIAIJ:Row too large"); 531eb62cbbSBarry Smith if (idxm[i] >= rstart && idxm[i] < rend) { 541eb62cbbSBarry Smith row = idxm[i] - rstart; 551eb62cbbSBarry Smith for ( j=0; j<n; j++ ) { 56bbb6d6a8SBarry Smith if (idxn[j] < 0) SETERRQ(1,"MatSetValues_MPIAIJ:Negative column"); 57bbb6d6a8SBarry Smith if (idxn[j] >= aij->N) SETERRQ(1,"MatSetValues_MPIAIJ:Col too large"); 581eb62cbbSBarry Smith if (idxn[j] >= cstart && idxn[j] < cend){ 591eb62cbbSBarry Smith col = idxn[j] - cstart; 6078b31e54SBarry Smith ierr = MatSetValues(aij->A,1,&row,1,&col,v+i*n+j,addv);CHKERRQ(ierr); 611eb62cbbSBarry Smith } 621eb62cbbSBarry Smith else { 63d6dfbf8fSBarry Smith if (aij->assembled) { 64b7c46309SBarry Smith if (!aij->colmap) {ierr = CreateColmap_Private(mat);CHKERRQ(ierr);} 659e25ed09SBarry Smith col = aij->colmap[idxn[j]] - 1; 66b7c46309SBarry Smith if (col < 0 && !((Mat_AIJ*)(aij->A->data))->nonew) { 672493cbb0SBarry Smith ierr = DisAssemble_MPIAIJ(mat); CHKERRQ(ierr); 682493cbb0SBarry Smith col = idxn[j]; 69d6dfbf8fSBarry Smith } 709e25ed09SBarry Smith } 719e25ed09SBarry Smith else col = idxn[j]; 7278b31e54SBarry Smith ierr = MatSetValues(aij->B,1,&row,1,&col,v+i*n+j,addv);CHKERRQ(ierr); 731eb62cbbSBarry Smith } 741eb62cbbSBarry Smith } 751eb62cbbSBarry Smith } 761eb62cbbSBarry Smith else { 77dbd7a890SLois Curfman McInnes ierr = StashValues_Private(&aij->stash,idxm[i],n,idxn,v+i*n,addv); 7878b31e54SBarry Smith CHKERRQ(ierr); 791eb62cbbSBarry Smith } 808a729477SBarry Smith } 818a729477SBarry Smith return 0; 828a729477SBarry Smith } 838a729477SBarry Smith 848a729477SBarry Smith /* 851eb62cbbSBarry Smith the assembly code is a lot like the code for vectors, we should 861eb62cbbSBarry Smith sometime derive a single assembly code that can be used for 871eb62cbbSBarry Smith either case. 888a729477SBarry Smith */ 898a729477SBarry Smith 90fc76ce87SLois Curfman McInnes static int MatAssemblyBegin_MPIAIJ(Mat mat,MatAssemblyType mode) 918a729477SBarry Smith { 9244a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 93d6dfbf8fSBarry Smith MPI_Comm comm = mat->comm; 946abc6512SBarry Smith int numtids = aij->numtids, *owners = aij->rowners; 951eb62cbbSBarry Smith int mytid = aij->mytid; 961eb62cbbSBarry Smith MPI_Request *send_waits,*recv_waits; 976abc6512SBarry Smith int *nprocs,i,j,idx,*procs,nsends,nreceives,nmax,*work; 985392566eSBarry Smith int tag = mat->tag, *owner,*starts,count,ierr; 991eb62cbbSBarry Smith InsertMode addv; 1001eb62cbbSBarry Smith Scalar *rvalues,*svalues; 1011eb62cbbSBarry Smith 1021eb62cbbSBarry Smith /* make sure all processors are either in INSERTMODE or ADDMODE */ 10328988994SBarry Smith MPI_Allreduce((void *) &aij->insertmode,(void *) &addv,1,MPI_INT, 1041eb62cbbSBarry Smith MPI_BOR,comm); 1059d00d63dSBarry Smith if (addv == (ADDVALUES|INSERTVALUES)) { 106bbb6d6a8SBarry Smith SETERRQ(1,"MatAssemblyBegin_MPIAIJ:Some processors inserted others added"); 1071eb62cbbSBarry Smith } 1081eb62cbbSBarry Smith aij->insertmode = addv; /* in case this processor had no cache */ 1091eb62cbbSBarry Smith 1101eb62cbbSBarry Smith /* first count number of contributors to each processor */ 11178b31e54SBarry Smith nprocs = (int *) PETSCMALLOC( 2*numtids*sizeof(int) ); CHKPTRQ(nprocs); 11278b31e54SBarry Smith PETSCMEMSET(nprocs,0,2*numtids*sizeof(int)); procs = nprocs + numtids; 11378b31e54SBarry Smith owner = (int *) PETSCMALLOC( (aij->stash.n+1)*sizeof(int) ); CHKPTRQ(owner); 1141eb62cbbSBarry Smith for ( i=0; i<aij->stash.n; i++ ) { 1151eb62cbbSBarry Smith idx = aij->stash.idx[i]; 1161eb62cbbSBarry Smith for ( j=0; j<numtids; j++ ) { 1171eb62cbbSBarry Smith if (idx >= owners[j] && idx < owners[j+1]) { 1181eb62cbbSBarry Smith nprocs[j]++; procs[j] = 1; owner[i] = j; break; 1198a729477SBarry Smith } 1208a729477SBarry Smith } 1218a729477SBarry Smith } 1221eb62cbbSBarry Smith nsends = 0; for ( i=0; i<numtids; i++ ) { nsends += procs[i];} 1231eb62cbbSBarry Smith 1241eb62cbbSBarry Smith /* inform other processors of number of messages and max length*/ 12578b31e54SBarry Smith work = (int *) PETSCMALLOC( numtids*sizeof(int) ); CHKPTRQ(work); 1261eb62cbbSBarry Smith MPI_Allreduce((void *) procs,(void *) work,numtids,MPI_INT,MPI_SUM,comm); 1271eb62cbbSBarry Smith nreceives = work[mytid]; 1281eb62cbbSBarry Smith MPI_Allreduce((void *) nprocs,(void *) work,numtids,MPI_INT,MPI_MAX,comm); 1291eb62cbbSBarry Smith nmax = work[mytid]; 13078b31e54SBarry Smith PETSCFREE(work); 1311eb62cbbSBarry Smith 1321eb62cbbSBarry Smith /* post receives: 1331eb62cbbSBarry Smith 1) each message will consist of ordered pairs 1341eb62cbbSBarry Smith (global index,value) we store the global index as a double 135d6dfbf8fSBarry Smith to simplify the message passing. 1361eb62cbbSBarry Smith 2) since we don't know how long each individual message is we 1371eb62cbbSBarry Smith allocate the largest needed buffer for each receive. Potentially 1381eb62cbbSBarry Smith this is a lot of wasted space. 1391eb62cbbSBarry Smith 1401eb62cbbSBarry Smith 1411eb62cbbSBarry Smith This could be done better. 1421eb62cbbSBarry Smith */ 14378b31e54SBarry Smith rvalues = (Scalar *) PETSCMALLOC(3*(nreceives+1)*(nmax+1)*sizeof(Scalar)); 14478b31e54SBarry Smith CHKPTRQ(rvalues); 14578b31e54SBarry Smith recv_waits = (MPI_Request *) PETSCMALLOC((nreceives+1)*sizeof(MPI_Request)); 14678b31e54SBarry Smith CHKPTRQ(recv_waits); 1471eb62cbbSBarry Smith for ( i=0; i<nreceives; i++ ) { 148c60448a5SBarry Smith MPI_Irecv((void *)(rvalues+3*nmax*i),3*nmax,MPIU_SCALAR,MPI_ANY_SOURCE,tag, 1491eb62cbbSBarry Smith comm,recv_waits+i); 1501eb62cbbSBarry Smith } 1511eb62cbbSBarry Smith 1521eb62cbbSBarry Smith /* do sends: 1531eb62cbbSBarry Smith 1) starts[i] gives the starting index in svalues for stuff going to 1541eb62cbbSBarry Smith the ith processor 1551eb62cbbSBarry Smith */ 15678b31e54SBarry Smith svalues = (Scalar *) PETSCMALLOC( 3*(aij->stash.n+1)*sizeof(Scalar) ); 15778b31e54SBarry Smith CHKPTRQ(svalues); 15878b31e54SBarry Smith send_waits = (MPI_Request *) PETSCMALLOC( (nsends+1)*sizeof(MPI_Request)); 15978b31e54SBarry Smith CHKPTRQ(send_waits); 16078b31e54SBarry Smith starts = (int *) PETSCMALLOC( numtids*sizeof(int) ); CHKPTRQ(starts); 1611eb62cbbSBarry Smith starts[0] = 0; 1621eb62cbbSBarry Smith for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 1631eb62cbbSBarry Smith for ( i=0; i<aij->stash.n; i++ ) { 1641eb62cbbSBarry Smith svalues[3*starts[owner[i]]] = (Scalar) aij->stash.idx[i]; 1651eb62cbbSBarry Smith svalues[3*starts[owner[i]]+1] = (Scalar) aij->stash.idy[i]; 1661eb62cbbSBarry Smith svalues[3*(starts[owner[i]]++)+2] = aij->stash.array[i]; 1671eb62cbbSBarry Smith } 16878b31e54SBarry Smith PETSCFREE(owner); 1691eb62cbbSBarry Smith starts[0] = 0; 1701eb62cbbSBarry Smith for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 1711eb62cbbSBarry Smith count = 0; 1721eb62cbbSBarry Smith for ( i=0; i<numtids; i++ ) { 1731eb62cbbSBarry Smith if (procs[i]) { 174c60448a5SBarry Smith MPI_Isend((void*)(svalues+3*starts[i]),3*nprocs[i],MPIU_SCALAR,i,tag, 1751eb62cbbSBarry Smith comm,send_waits+count++); 1761eb62cbbSBarry Smith } 1771eb62cbbSBarry Smith } 17878b31e54SBarry Smith PETSCFREE(starts); PETSCFREE(nprocs); 1791eb62cbbSBarry Smith 1801eb62cbbSBarry Smith /* Free cache space */ 18178b31e54SBarry Smith ierr = StashDestroy_Private(&aij->stash); CHKERRQ(ierr); 1821eb62cbbSBarry Smith 1831eb62cbbSBarry Smith aij->svalues = svalues; aij->rvalues = rvalues; 1841eb62cbbSBarry Smith aij->nsends = nsends; aij->nrecvs = nreceives; 1851eb62cbbSBarry Smith aij->send_waits = send_waits; aij->recv_waits = recv_waits; 1861eb62cbbSBarry Smith aij->rmax = nmax; 1871eb62cbbSBarry Smith 1881eb62cbbSBarry Smith return 0; 1891eb62cbbSBarry Smith } 19044a69424SLois Curfman McInnes extern int MatSetUpMultiply_MPIAIJ(Mat); 1911eb62cbbSBarry Smith 192fc76ce87SLois Curfman McInnes static int MatAssemblyEnd_MPIAIJ(Mat mat,MatAssemblyType mode) 1931eb62cbbSBarry Smith { 1941eb62cbbSBarry Smith int ierr; 19544a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 1961eb62cbbSBarry Smith MPI_Status *send_status,recv_status; 1976abc6512SBarry Smith int imdex,nrecvs = aij->nrecvs, count = nrecvs, i, n; 1982493cbb0SBarry Smith int row,col,other_disassembled; 1991eb62cbbSBarry Smith Scalar *values,val; 2001eb62cbbSBarry Smith InsertMode addv = aij->insertmode; 2011eb62cbbSBarry Smith 2021eb62cbbSBarry Smith /* wait on receives */ 2031eb62cbbSBarry Smith while (count) { 204d6dfbf8fSBarry Smith MPI_Waitany(nrecvs,aij->recv_waits,&imdex,&recv_status); 2051eb62cbbSBarry Smith /* unpack receives into our local space */ 206d6dfbf8fSBarry Smith values = aij->rvalues + 3*imdex*aij->rmax; 207c60448a5SBarry Smith MPI_Get_count(&recv_status,MPIU_SCALAR,&n); 2081eb62cbbSBarry Smith n = n/3; 2091eb62cbbSBarry Smith for ( i=0; i<n; i++ ) { 2101eb62cbbSBarry Smith row = (int) PETSCREAL(values[3*i]) - aij->rstart; 2111eb62cbbSBarry Smith col = (int) PETSCREAL(values[3*i+1]); 2121eb62cbbSBarry Smith val = values[3*i+2]; 2131eb62cbbSBarry Smith if (col >= aij->cstart && col < aij->cend) { 2141eb62cbbSBarry Smith col -= aij->cstart; 2151eb62cbbSBarry Smith MatSetValues(aij->A,1,&row,1,&col,&val,addv); 2161eb62cbbSBarry Smith } 2171eb62cbbSBarry Smith else { 218d6dfbf8fSBarry Smith if (aij->assembled) { 219b7c46309SBarry Smith if (!aij->colmap) {ierr = CreateColmap_Private(mat);CHKERRQ(ierr);} 2209e25ed09SBarry Smith col = aij->colmap[col] - 1; 221b7c46309SBarry Smith if (col < 0 && !((Mat_AIJ*)(aij->A->data))->nonew) { 2222493cbb0SBarry Smith ierr = DisAssemble_MPIAIJ(mat); CHKERRQ(ierr); 2232493cbb0SBarry Smith col = (int) PETSCREAL(values[3*i+1]); 224d6dfbf8fSBarry Smith } 2259e25ed09SBarry Smith } 2261eb62cbbSBarry Smith MatSetValues(aij->B,1,&row,1,&col,&val,addv); 2271eb62cbbSBarry Smith } 2281eb62cbbSBarry Smith } 2291eb62cbbSBarry Smith count--; 2301eb62cbbSBarry Smith } 23178b31e54SBarry Smith PETSCFREE(aij->recv_waits); PETSCFREE(aij->rvalues); 2321eb62cbbSBarry Smith 2331eb62cbbSBarry Smith /* wait on sends */ 2341eb62cbbSBarry Smith if (aij->nsends) { 23578b31e54SBarry Smith send_status = (MPI_Status *) PETSCMALLOC( aij->nsends*sizeof(MPI_Status) ); 23678b31e54SBarry Smith CHKPTRQ(send_status); 2371eb62cbbSBarry Smith MPI_Waitall(aij->nsends,aij->send_waits,send_status); 23878b31e54SBarry Smith PETSCFREE(send_status); 2391eb62cbbSBarry Smith } 24078b31e54SBarry Smith PETSCFREE(aij->send_waits); PETSCFREE(aij->svalues); 2411eb62cbbSBarry Smith 24207a0e7adSLois Curfman McInnes aij->insertmode = NOTSETVALUES; 24378b31e54SBarry Smith ierr = MatAssemblyBegin(aij->A,mode); CHKERRQ(ierr); 24478b31e54SBarry Smith ierr = MatAssemblyEnd(aij->A,mode); CHKERRQ(ierr); 2451eb62cbbSBarry Smith 2462493cbb0SBarry Smith /* determine if any processor has disassembled, if so we must 2472493cbb0SBarry Smith also disassemble ourselfs, in order that we may reassemble. */ 2482493cbb0SBarry Smith MPI_Allreduce((void *) &aij->assembled,(void *) &other_disassembled,1, 2492493cbb0SBarry Smith MPI_INT,MPI_PROD,mat->comm); 2502493cbb0SBarry Smith if (aij->assembled && !other_disassembled) { 2512493cbb0SBarry Smith ierr = DisAssemble_MPIAIJ(mat); CHKERRQ(ierr); 2522493cbb0SBarry Smith } 2532493cbb0SBarry Smith 2545e42470aSBarry Smith if (!aij->assembled && mode == FINAL_ASSEMBLY) { 25578b31e54SBarry Smith ierr = MatSetUpMultiply_MPIAIJ(mat); CHKERRQ(ierr); 256d6dfbf8fSBarry Smith aij->assembled = 1; 2575e42470aSBarry Smith } 25878b31e54SBarry Smith ierr = MatAssemblyBegin(aij->B,mode); CHKERRQ(ierr); 25978b31e54SBarry Smith ierr = MatAssemblyEnd(aij->B,mode); CHKERRQ(ierr); 2605e42470aSBarry Smith 2618a729477SBarry Smith return 0; 2628a729477SBarry Smith } 2638a729477SBarry Smith 2642ee70a88SLois Curfman McInnes static int MatZeroEntries_MPIAIJ(Mat A) 2651eb62cbbSBarry Smith { 26644a69424SLois Curfman McInnes Mat_MPIAIJ *l = (Mat_MPIAIJ *) A->data; 267dbd7a890SLois Curfman McInnes int ierr; 26878b31e54SBarry Smith ierr = MatZeroEntries(l->A); CHKERRQ(ierr); 26978b31e54SBarry Smith ierr = MatZeroEntries(l->B); CHKERRQ(ierr); 2701eb62cbbSBarry Smith return 0; 2711eb62cbbSBarry Smith } 2721eb62cbbSBarry Smith 2731eb62cbbSBarry Smith /* again this uses the same basic stratagy as in the assembly and 2741eb62cbbSBarry Smith scatter create routines, we should try to do it systemamatically 2751eb62cbbSBarry Smith if we can figure out the proper level of generality. */ 2761eb62cbbSBarry Smith 2771eb62cbbSBarry Smith /* the code does not do the diagonal entries correctly unless the 2781eb62cbbSBarry Smith matrix is square and the column and row owerships are identical. 2791eb62cbbSBarry Smith This is a BUG. The only way to fix it seems to be to access 2801eb62cbbSBarry Smith aij->A and aij->B directly and not through the MatZeroRows() 2811eb62cbbSBarry Smith routine. 2821eb62cbbSBarry Smith */ 28344a69424SLois Curfman McInnes static int MatZeroRows_MPIAIJ(Mat A,IS is,Scalar *diag) 2841eb62cbbSBarry Smith { 28544a69424SLois Curfman McInnes Mat_MPIAIJ *l = (Mat_MPIAIJ *) A->data; 2861eb62cbbSBarry Smith int i,ierr,N, *rows,*owners = l->rowners,numtids = l->numtids; 2876abc6512SBarry Smith int *procs,*nprocs,j,found,idx,nsends,*work; 2881eb62cbbSBarry Smith int nmax,*svalues,*starts,*owner,nrecvs,mytid = l->mytid; 2895392566eSBarry Smith int *rvalues,tag = A->tag,count,base,slen,n,*source; 290d6dfbf8fSBarry Smith int *lens,imdex,*lrows,*values; 291d6dfbf8fSBarry Smith MPI_Comm comm = A->comm; 2921eb62cbbSBarry Smith MPI_Request *send_waits,*recv_waits; 2931eb62cbbSBarry Smith MPI_Status recv_status,*send_status; 2941eb62cbbSBarry Smith IS istmp; 2951eb62cbbSBarry Smith 296c8f67822SLois Curfman McInnes if (!l->assembled) 29778b31e54SBarry Smith SETERRQ(1,"MatZeroRows_MPIAIJ:Must assemble matrix first"); 29878b31e54SBarry Smith ierr = ISGetLocalSize(is,&N); CHKERRQ(ierr); 29978b31e54SBarry Smith ierr = ISGetIndices(is,&rows); CHKERRQ(ierr); 3001eb62cbbSBarry Smith 3011eb62cbbSBarry Smith /* first count number of contributors to each processor */ 30278b31e54SBarry Smith nprocs = (int *) PETSCMALLOC( 2*numtids*sizeof(int) ); CHKPTRQ(nprocs); 30378b31e54SBarry Smith PETSCMEMSET(nprocs,0,2*numtids*sizeof(int)); procs = nprocs + numtids; 30478b31e54SBarry Smith owner = (int *) PETSCMALLOC((N+1)*sizeof(int)); CHKPTRQ(owner); /* see note*/ 3051eb62cbbSBarry Smith for ( i=0; i<N; i++ ) { 3061eb62cbbSBarry Smith idx = rows[i]; 3071eb62cbbSBarry Smith found = 0; 3081eb62cbbSBarry Smith for ( j=0; j<numtids; j++ ) { 3091eb62cbbSBarry Smith if (idx >= owners[j] && idx < owners[j+1]) { 3101eb62cbbSBarry Smith nprocs[j]++; procs[j] = 1; owner[i] = j; found = 1; break; 3111eb62cbbSBarry Smith } 3121eb62cbbSBarry Smith } 313bbb6d6a8SBarry Smith if (!found) SETERRQ(1,"MatZeroRows_MPIAIJ:Index out of range"); 3141eb62cbbSBarry Smith } 3151eb62cbbSBarry Smith nsends = 0; for ( i=0; i<numtids; i++ ) { nsends += procs[i];} 3161eb62cbbSBarry Smith 3171eb62cbbSBarry Smith /* inform other processors of number of messages and max length*/ 31878b31e54SBarry Smith work = (int *) PETSCMALLOC( numtids*sizeof(int) ); CHKPTRQ(work); 3191eb62cbbSBarry Smith MPI_Allreduce((void *) procs,(void *) work,numtids,MPI_INT,MPI_SUM,comm); 3201eb62cbbSBarry Smith nrecvs = work[mytid]; 3211eb62cbbSBarry Smith MPI_Allreduce((void *) nprocs,(void *) work,numtids,MPI_INT,MPI_MAX,comm); 3221eb62cbbSBarry Smith nmax = work[mytid]; 32378b31e54SBarry Smith PETSCFREE(work); 3241eb62cbbSBarry Smith 3251eb62cbbSBarry Smith /* post receives: */ 32678b31e54SBarry Smith rvalues = (int *) PETSCMALLOC((nrecvs+1)*(nmax+1)*sizeof(int)); /*see note */ 32778b31e54SBarry Smith CHKPTRQ(rvalues); 32878b31e54SBarry Smith recv_waits = (MPI_Request *) PETSCMALLOC((nrecvs+1)*sizeof(MPI_Request)); 32978b31e54SBarry Smith CHKPTRQ(recv_waits); 3301eb62cbbSBarry Smith for ( i=0; i<nrecvs; i++ ) { 3311eb62cbbSBarry Smith MPI_Irecv((void *)(rvalues+nmax*i),nmax,MPI_INT,MPI_ANY_SOURCE,tag, 3321eb62cbbSBarry Smith comm,recv_waits+i); 3331eb62cbbSBarry Smith } 3341eb62cbbSBarry Smith 3351eb62cbbSBarry Smith /* do sends: 3361eb62cbbSBarry Smith 1) starts[i] gives the starting index in svalues for stuff going to 3371eb62cbbSBarry Smith the ith processor 3381eb62cbbSBarry Smith */ 33978b31e54SBarry Smith svalues = (int *) PETSCMALLOC( (N+1)*sizeof(int) ); CHKPTRQ(svalues); 34078b31e54SBarry Smith send_waits = (MPI_Request *) PETSCMALLOC( (nsends+1)*sizeof(MPI_Request)); 34178b31e54SBarry Smith CHKPTRQ(send_waits); 34278b31e54SBarry Smith starts = (int *) PETSCMALLOC( (numtids+1)*sizeof(int) ); CHKPTRQ(starts); 3431eb62cbbSBarry Smith starts[0] = 0; 3441eb62cbbSBarry Smith for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 3451eb62cbbSBarry Smith for ( i=0; i<N; i++ ) { 3461eb62cbbSBarry Smith svalues[starts[owner[i]]++] = rows[i]; 3471eb62cbbSBarry Smith } 3481eb62cbbSBarry Smith ISRestoreIndices(is,&rows); 3491eb62cbbSBarry Smith 3501eb62cbbSBarry Smith starts[0] = 0; 3511eb62cbbSBarry Smith for ( i=1; i<numtids+1; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 3521eb62cbbSBarry Smith count = 0; 3531eb62cbbSBarry Smith for ( i=0; i<numtids; i++ ) { 3541eb62cbbSBarry Smith if (procs[i]) { 3551eb62cbbSBarry Smith MPI_Isend((void*)(svalues+starts[i]),nprocs[i],MPI_INT,i,tag, 3561eb62cbbSBarry Smith comm,send_waits+count++); 3571eb62cbbSBarry Smith } 3581eb62cbbSBarry Smith } 35978b31e54SBarry Smith PETSCFREE(starts); 3601eb62cbbSBarry Smith 3611eb62cbbSBarry Smith base = owners[mytid]; 3621eb62cbbSBarry Smith 3631eb62cbbSBarry Smith /* wait on receives */ 36478b31e54SBarry Smith lens = (int *) PETSCMALLOC( 2*(nrecvs+1)*sizeof(int) ); CHKPTRQ(lens); 3651eb62cbbSBarry Smith source = lens + nrecvs; 3661eb62cbbSBarry Smith count = nrecvs; slen = 0; 3671eb62cbbSBarry Smith while (count) { 368d6dfbf8fSBarry Smith MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status); 3691eb62cbbSBarry Smith /* unpack receives into our local space */ 3701eb62cbbSBarry Smith MPI_Get_count(&recv_status,MPI_INT,&n); 371d6dfbf8fSBarry Smith source[imdex] = recv_status.MPI_SOURCE; 372d6dfbf8fSBarry Smith lens[imdex] = n; 3731eb62cbbSBarry Smith slen += n; 3741eb62cbbSBarry Smith count--; 3751eb62cbbSBarry Smith } 37678b31e54SBarry Smith PETSCFREE(recv_waits); 3771eb62cbbSBarry Smith 3781eb62cbbSBarry Smith /* move the data into the send scatter */ 37978b31e54SBarry Smith lrows = (int *) PETSCMALLOC( (slen+1)*sizeof(int) ); CHKPTRQ(lrows); 3801eb62cbbSBarry Smith count = 0; 3811eb62cbbSBarry Smith for ( i=0; i<nrecvs; i++ ) { 3821eb62cbbSBarry Smith values = rvalues + i*nmax; 3831eb62cbbSBarry Smith for ( j=0; j<lens[i]; j++ ) { 3841eb62cbbSBarry Smith lrows[count++] = values[j] - base; 3851eb62cbbSBarry Smith } 3861eb62cbbSBarry Smith } 38778b31e54SBarry Smith PETSCFREE(rvalues); PETSCFREE(lens); 38878b31e54SBarry Smith PETSCFREE(owner); PETSCFREE(nprocs); 3891eb62cbbSBarry Smith 3901eb62cbbSBarry Smith /* actually zap the local rows */ 3916b5873e3SBarry Smith ierr = ISCreateSequential(MPI_COMM_SELF,slen,lrows,&istmp); 392464493b3SBarry Smith PLogObjectParent(A,istmp); 39378b31e54SBarry Smith CHKERRQ(ierr); PETSCFREE(lrows); 39478b31e54SBarry Smith ierr = MatZeroRows(l->A,istmp,diag); CHKERRQ(ierr); 39578b31e54SBarry Smith ierr = MatZeroRows(l->B,istmp,0); CHKERRQ(ierr); 39678b31e54SBarry Smith ierr = ISDestroy(istmp); CHKERRQ(ierr); 3971eb62cbbSBarry Smith 3981eb62cbbSBarry Smith /* wait on sends */ 3991eb62cbbSBarry Smith if (nsends) { 40078b31e54SBarry Smith send_status = (MPI_Status *) PETSCMALLOC( nsends*sizeof(MPI_Status) ); 40178b31e54SBarry Smith CHKPTRQ(send_status); 4021eb62cbbSBarry Smith MPI_Waitall(nsends,send_waits,send_status); 40378b31e54SBarry Smith PETSCFREE(send_status); 4041eb62cbbSBarry Smith } 40578b31e54SBarry Smith PETSCFREE(send_waits); PETSCFREE(svalues); 4061eb62cbbSBarry Smith 4071eb62cbbSBarry Smith 4081eb62cbbSBarry Smith return 0; 4091eb62cbbSBarry Smith } 4101eb62cbbSBarry Smith 41144a69424SLois Curfman McInnes static int MatMult_MPIAIJ(Mat aijin,Vec xx,Vec yy) 4121eb62cbbSBarry Smith { 41344a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 4141eb62cbbSBarry Smith int ierr; 41578b31e54SBarry Smith if (!aij->assembled) SETERRQ(1,"MatMult_MPIAIJ:must assemble matrix first"); 41606be10caSBarry Smith ierr = VecScatterBegin(xx,aij->lvec,INSERTVALUES,SCATTERALL,aij->Mvctx); 41778b31e54SBarry Smith CHKERRQ(ierr); 41878b31e54SBarry Smith ierr = MatMult(aij->A,xx,yy); CHKERRQ(ierr); 41906be10caSBarry Smith ierr = VecScatterEnd(xx,aij->lvec,INSERTVALUES,SCATTERALL,aij->Mvctx); 42078b31e54SBarry Smith CHKERRQ(ierr); 42178b31e54SBarry Smith ierr = MatMultAdd(aij->B,aij->lvec,yy,yy); CHKERRQ(ierr); 4221eb62cbbSBarry Smith return 0; 4231eb62cbbSBarry Smith } 4241eb62cbbSBarry Smith 42544a69424SLois Curfman McInnes static int MatMultAdd_MPIAIJ(Mat aijin,Vec xx,Vec yy,Vec zz) 426da3a660dSBarry Smith { 42744a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 428da3a660dSBarry Smith int ierr; 42978b31e54SBarry Smith if (!aij->assembled) SETERRQ(1,"MatMult_MPIAIJ:must assemble matrix first"); 43006be10caSBarry Smith ierr = VecScatterBegin(xx,aij->lvec,INSERTVALUES,SCATTERALL,aij->Mvctx); 43178b31e54SBarry Smith CHKERRQ(ierr); 43278b31e54SBarry Smith ierr = MatMultAdd(aij->A,xx,yy,zz); CHKERRQ(ierr); 43306be10caSBarry Smith ierr = VecScatterEnd(xx,aij->lvec,INSERTVALUES,SCATTERALL,aij->Mvctx); 43478b31e54SBarry Smith CHKERRQ(ierr); 43578b31e54SBarry Smith ierr = MatMultAdd(aij->B,aij->lvec,zz,zz); CHKERRQ(ierr); 436da3a660dSBarry Smith return 0; 437da3a660dSBarry Smith } 438da3a660dSBarry Smith 43944a69424SLois Curfman McInnes static int MatMultTrans_MPIAIJ(Mat aijin,Vec xx,Vec yy) 440da3a660dSBarry Smith { 44144a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 442da3a660dSBarry Smith int ierr; 443da3a660dSBarry Smith 44444a69424SLois Curfman McInnes if (!aij->assembled) 44578b31e54SBarry Smith SETERRQ(1,"MatMulTrans_MPIAIJ:must assemble matrix first"); 446da3a660dSBarry Smith /* do nondiagonal part */ 44778b31e54SBarry Smith ierr = MatMultTrans(aij->B,xx,aij->lvec); CHKERRQ(ierr); 448da3a660dSBarry Smith /* send it on its way */ 44906be10caSBarry Smith ierr = VecScatterBegin(aij->lvec,yy,ADDVALUES, 45078b31e54SBarry Smith (ScatterMode)(SCATTERALL|SCATTERREVERSE),aij->Mvctx); CHKERRQ(ierr); 451da3a660dSBarry Smith /* do local part */ 45278b31e54SBarry Smith ierr = MatMultTrans(aij->A,xx,yy); CHKERRQ(ierr); 453da3a660dSBarry Smith /* receive remote parts: note this assumes the values are not actually */ 454da3a660dSBarry Smith /* inserted in yy until the next line, which is true for my implementation*/ 455da3a660dSBarry Smith /* but is not perhaps always true. */ 45606be10caSBarry Smith ierr = VecScatterEnd(aij->lvec,yy,ADDVALUES, 45778b31e54SBarry Smith (ScatterMode)(SCATTERALL|SCATTERREVERSE),aij->Mvctx); CHKERRQ(ierr); 458da3a660dSBarry Smith return 0; 459da3a660dSBarry Smith } 460da3a660dSBarry Smith 46144a69424SLois Curfman McInnes static int MatMultTransAdd_MPIAIJ(Mat aijin,Vec xx,Vec yy,Vec zz) 462da3a660dSBarry Smith { 46344a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 464da3a660dSBarry Smith int ierr; 465da3a660dSBarry Smith 46644a69424SLois Curfman McInnes if (!aij->assembled) 46778b31e54SBarry Smith SETERRQ(1,"MatMulTransAdd_MPIAIJ:must assemble matrix first"); 468da3a660dSBarry Smith /* do nondiagonal part */ 46978b31e54SBarry Smith ierr = MatMultTrans(aij->B,xx,aij->lvec); CHKERRQ(ierr); 470da3a660dSBarry Smith /* send it on its way */ 47106be10caSBarry Smith ierr = VecScatterBegin(aij->lvec,zz,ADDVALUES, 47278b31e54SBarry Smith (ScatterMode)(SCATTERALL|SCATTERREVERSE),aij->Mvctx); CHKERRQ(ierr); 473da3a660dSBarry Smith /* do local part */ 47478b31e54SBarry Smith ierr = MatMultTransAdd(aij->A,xx,yy,zz); CHKERRQ(ierr); 475da3a660dSBarry Smith /* receive remote parts: note this assumes the values are not actually */ 476da3a660dSBarry Smith /* inserted in yy until the next line, which is true for my implementation*/ 477da3a660dSBarry Smith /* but is not perhaps always true. */ 47806be10caSBarry Smith ierr = VecScatterEnd(aij->lvec,zz,ADDVALUES, 47978b31e54SBarry Smith (ScatterMode)(SCATTERALL|SCATTERREVERSE),aij->Mvctx); CHKERRQ(ierr); 480da3a660dSBarry Smith return 0; 481da3a660dSBarry Smith } 482da3a660dSBarry Smith 4831eb62cbbSBarry Smith /* 4841eb62cbbSBarry Smith This only works correctly for square matrices where the subblock A->A is the 4851eb62cbbSBarry Smith diagonal block 4861eb62cbbSBarry Smith */ 487d1710a03SLois Curfman McInnes static int MatGetDiagonal_MPIAIJ(Mat Ain,Vec v) 4881eb62cbbSBarry Smith { 48944a69424SLois Curfman McInnes Mat_MPIAIJ *A = (Mat_MPIAIJ *) Ain->data; 49078b31e54SBarry Smith if (!A->assembled) SETERRQ(1,"MatGetDiag_MPIAIJ:must assemble matrix first"); 4911eb62cbbSBarry Smith return MatGetDiagonal(A->A,v); 4921eb62cbbSBarry Smith } 4931eb62cbbSBarry Smith 49444a69424SLois Curfman McInnes static int MatDestroy_MPIAIJ(PetscObject obj) 4951eb62cbbSBarry Smith { 4961eb62cbbSBarry Smith Mat mat = (Mat) obj; 49744a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 4981eb62cbbSBarry Smith int ierr; 499a5a9c739SBarry Smith #if defined(PETSC_LOG) 5006e35fa57SLois Curfman McInnes PLogObjectState(obj,"Rows=%d, Cols=%d",aij->M,aij->N); 501a5a9c739SBarry Smith #endif 50278b31e54SBarry Smith PETSCFREE(aij->rowners); 50378b31e54SBarry Smith ierr = MatDestroy(aij->A); CHKERRQ(ierr); 50478b31e54SBarry Smith ierr = MatDestroy(aij->B); CHKERRQ(ierr); 50578b31e54SBarry Smith if (aij->colmap) PETSCFREE(aij->colmap); 50678b31e54SBarry Smith if (aij->garray) PETSCFREE(aij->garray); 5071eb62cbbSBarry Smith if (aij->lvec) VecDestroy(aij->lvec); 5081eb62cbbSBarry Smith if (aij->Mvctx) VecScatterCtxDestroy(aij->Mvctx); 50978b31e54SBarry Smith PETSCFREE(aij); 510a5a9c739SBarry Smith PLogObjectDestroy(mat); 511a5a9c739SBarry Smith PETSCHEADERDESTROY(mat); 5121eb62cbbSBarry Smith return 0; 5131eb62cbbSBarry Smith } 5147857610eSBarry Smith #include "draw.h" 515b16a3bb1SBarry Smith #include "pinclude/pviewer.h" 516ee50ffe9SBarry Smith 51744a69424SLois Curfman McInnes static int MatView_MPIAIJ(PetscObject obj,Viewer viewer) 5181eb62cbbSBarry Smith { 5191eb62cbbSBarry Smith Mat mat = (Mat) obj; 52044a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 521f72585f2SLois Curfman McInnes int ierr, format; 522d13ab20cSBarry Smith PetscObject vobj = (PetscObject) viewer; 5231eb62cbbSBarry Smith 52478b31e54SBarry Smith if (!aij->assembled) SETERRQ(1,"MatView_MPIAIJ:must assemble matrix first"); 525154123eaSLois Curfman McInnes if (!viewer) { /* so that viewers may be used from debuggers */ 52621b0d8fbSLois Curfman McInnes viewer = STDOUT_VIEWER_SELF; vobj = (PetscObject) viewer; 527154123eaSLois Curfman McInnes } 528ab254492SBarry Smith if (vobj->cookie == DRAW_COOKIE && vobj->type == NULLWINDOW) return 0; 529f72585f2SLois Curfman McInnes format = ViewerFileGetFormat_Private(viewer); 530f72585f2SLois Curfman McInnes if (vobj->cookie == VIEWER_COOKIE && format == FILE_FORMAT_INFO && 531f72585f2SLois Curfman McInnes (vobj->type == FILE_VIEWER || vobj->type == FILES_VIEWER)) { 532f72585f2SLois Curfman McInnes /* do nothing for now */ 533f72585f2SLois Curfman McInnes } 534f72585f2SLois Curfman McInnes else if (vobj->cookie == VIEWER_COOKIE && vobj->type == FILE_VIEWER) { 5354a0ce102SLois Curfman McInnes FILE *fd = ViewerFileGetPointer_Private(viewer); 5367f813858SBarry Smith MPIU_Seq_begin(mat->comm,1); 537d13ab20cSBarry Smith fprintf(fd,"[%d] rows %d starts %d ends %d cols %d starts %d ends %d\n", 5381eb62cbbSBarry Smith aij->mytid,aij->m,aij->rstart,aij->rend,aij->n,aij->cstart, 5391eb62cbbSBarry Smith aij->cend); 54078b31e54SBarry Smith ierr = MatView(aij->A,viewer); CHKERRQ(ierr); 54178b31e54SBarry Smith ierr = MatView(aij->B,viewer); CHKERRQ(ierr); 542d13ab20cSBarry Smith fflush(fd); 5437f813858SBarry Smith MPIU_Seq_end(mat->comm,1); 544d13ab20cSBarry Smith } 5457857610eSBarry Smith else if ((vobj->cookie == VIEWER_COOKIE && vobj->type == FILES_VIEWER) || 5467857610eSBarry Smith vobj->cookie == DRAW_COOKIE) { 54795373324SBarry Smith int numtids = aij->numtids, mytid = aij->mytid; 54895373324SBarry Smith if (numtids == 1) { 54978b31e54SBarry Smith ierr = MatView(aij->A,viewer); CHKERRQ(ierr); 55095373324SBarry Smith } 55195373324SBarry Smith else { 55295373324SBarry Smith /* assemble the entire matrix onto first processor. */ 55395373324SBarry Smith Mat A; 5542ee70a88SLois Curfman McInnes Mat_AIJ *Aloc; 5552eb8c8abSBarry Smith int M = aij->M, N = aij->N,m,*ai,*aj,row,*cols,i,*ct; 55695373324SBarry Smith Scalar *a; 5572ee70a88SLois Curfman McInnes 55895373324SBarry Smith if (!mytid) { 55995373324SBarry Smith ierr = MatCreateMPIAIJ(mat->comm,M,N,M,N,0,0,0,0,&A); 56095373324SBarry Smith } 56195373324SBarry Smith else { 56295373324SBarry Smith ierr = MatCreateMPIAIJ(mat->comm,0,0,M,N,0,0,0,0,&A); 56395373324SBarry Smith } 564464493b3SBarry Smith PLogObjectParent(mat,A); 56578b31e54SBarry Smith CHKERRQ(ierr); 56695373324SBarry Smith 56795373324SBarry Smith /* copy over the A part */ 5682ee70a88SLois Curfman McInnes Aloc = (Mat_AIJ*) aij->A->data; 5692ee70a88SLois Curfman McInnes m = Aloc->m; ai = Aloc->i; aj = Aloc->j; a = Aloc->a; 57095373324SBarry Smith row = aij->rstart; 571b7c46309SBarry Smith for ( i=0; i<ai[m]-1; i++ ) {aj[i] += aij->cstart - 1;} 57295373324SBarry Smith for ( i=0; i<m; i++ ) { 57307a0e7adSLois Curfman McInnes ierr = MatSetValues(A,1,&row,ai[i+1]-ai[i],aj,a,INSERTVALUES); 57478b31e54SBarry Smith CHKERRQ(ierr); 57595373324SBarry Smith row++; a += ai[i+1]-ai[i]; aj += ai[i+1]-ai[i]; 57695373324SBarry Smith } 5772ee70a88SLois Curfman McInnes aj = Aloc->j; 578b7c46309SBarry Smith for ( i=0; i<ai[m]-1; i++ ) {aj[i] -= aij->cstart - 1;} 57995373324SBarry Smith 58095373324SBarry Smith /* copy over the B part */ 5812ee70a88SLois Curfman McInnes Aloc = (Mat_AIJ*) aij->B->data; 5822ee70a88SLois Curfman McInnes m = Aloc->m; ai = Aloc->i; aj = Aloc->j; a = Aloc->a; 58395373324SBarry Smith row = aij->rstart; 58478b31e54SBarry Smith ct = cols = (int *) PETSCMALLOC( (ai[m]+1)*sizeof(int) ); CHKPTRQ(cols); 585b7c46309SBarry Smith for ( i=0; i<ai[m]-1; i++ ) {cols[i] = aij->garray[aj[i]-1];} 58695373324SBarry Smith for ( i=0; i<m; i++ ) { 58707a0e7adSLois Curfman McInnes ierr = MatSetValues(A,1,&row,ai[i+1]-ai[i],cols,a,INSERTVALUES); 58878b31e54SBarry Smith CHKERRQ(ierr); 58995373324SBarry Smith row++; a += ai[i+1]-ai[i]; cols += ai[i+1]-ai[i]; 59095373324SBarry Smith } 59178b31e54SBarry Smith PETSCFREE(ct); 59278b31e54SBarry Smith ierr = MatAssemblyBegin(A,FINAL_ASSEMBLY); CHKERRQ(ierr); 59378b31e54SBarry Smith ierr = MatAssemblyEnd(A,FINAL_ASSEMBLY); CHKERRQ(ierr); 59495373324SBarry Smith if (!mytid) { 59578b31e54SBarry Smith ierr = MatView(((Mat_MPIAIJ*)(A->data))->A,viewer); CHKERRQ(ierr); 59695373324SBarry Smith } 59778b31e54SBarry Smith ierr = MatDestroy(A); CHKERRQ(ierr); 59895373324SBarry Smith } 59995373324SBarry Smith } 6001eb62cbbSBarry Smith return 0; 6011eb62cbbSBarry Smith } 6021eb62cbbSBarry Smith 60380b4ade8SLois Curfman McInnes extern int MatMarkDiag_AIJ(Mat); 6041eb62cbbSBarry Smith /* 6051eb62cbbSBarry Smith This has to provide several versions. 6061eb62cbbSBarry Smith 6071eb62cbbSBarry Smith 1) per sequential 6081eb62cbbSBarry Smith 2) a) use only local smoothing updating outer values only once. 6091eb62cbbSBarry Smith b) local smoothing updating outer values each inner iteration 610d6dfbf8fSBarry Smith 3) color updating out values betwen colors. 6111eb62cbbSBarry Smith */ 612fc76ce87SLois Curfman McInnes static int MatRelax_MPIAIJ(Mat matin,Vec bb,double omega,MatSORType flag, 613fc76ce87SLois Curfman McInnes double shift,int its,Vec xx) 6148a729477SBarry Smith { 61544a69424SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 616d6dfbf8fSBarry Smith Mat AA = mat->A, BB = mat->B; 61744a69424SLois Curfman McInnes Mat_AIJ *A = (Mat_AIJ *) AA->data, *B = (Mat_AIJ *)BB->data; 6186abc6512SBarry Smith Scalar zero = 0.0,*b,*x,*xs,*ls,d,*v,sum,scale,*t,*ts; 6196abc6512SBarry Smith int ierr,*idx, *diag; 6206abc6512SBarry Smith int n = mat->n, m = mat->m, i; 621da3a660dSBarry Smith Vec tt; 6228a729477SBarry Smith 62378b31e54SBarry Smith if (!mat->assembled) SETERRQ(1,"MatRelax_MPIAIJ:must assemble matrix first"); 6241eb62cbbSBarry Smith 625d6dfbf8fSBarry Smith VecGetArray(xx,&x); VecGetArray(bb,&b); VecGetArray(mat->lvec,&ls); 626d6dfbf8fSBarry Smith xs = x -1; /* shift by one for index start of 1 */ 627da3a660dSBarry Smith ls--; 62880b4ade8SLois Curfman McInnes if (!A->diag) {if ((ierr = MatMarkDiag_AIJ(AA))) return ierr;} 629d6dfbf8fSBarry Smith diag = A->diag; 630acb40c82SBarry Smith if (flag == SOR_APPLY_UPPER || flag == SOR_APPLY_LOWER) { 63142f8db3fSLois Curfman McInnes SETERRQ(1,"MatRelax_MPIAIJ:Option not yet supported"); 632acb40c82SBarry Smith } 633da3a660dSBarry Smith if (flag & SOR_EISENSTAT) { 634da3a660dSBarry Smith /* Let A = L + U + D; where L is lower trianglar, 635da3a660dSBarry Smith U is upper triangular, E is diagonal; This routine applies 636da3a660dSBarry Smith 637da3a660dSBarry Smith (L + E)^{-1} A (U + E)^{-1} 638da3a660dSBarry Smith 639da3a660dSBarry Smith to a vector efficiently using Eisenstat's trick. This is for 640da3a660dSBarry Smith the case of SSOR preconditioner, so E is D/omega where omega 641da3a660dSBarry Smith is the relaxation factor. 642da3a660dSBarry Smith */ 64378b31e54SBarry Smith ierr = VecDuplicate(xx,&tt); CHKERRQ(ierr); 644464493b3SBarry Smith PLogObjectParent(matin,tt); 645da3a660dSBarry Smith VecGetArray(tt,&t); 646da3a660dSBarry Smith scale = (2.0/omega) - 1.0; 647da3a660dSBarry Smith /* x = (E + U)^{-1} b */ 648da3a660dSBarry Smith VecSet(&zero,mat->lvec); 64906be10caSBarry Smith ierr = VecPipelineBegin(xx,mat->lvec,INSERTVALUES,PIPELINEUP, 65078b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 651da3a660dSBarry Smith for ( i=m-1; i>-1; i-- ) { 652da3a660dSBarry Smith n = A->i[i+1] - diag[i] - 1; 653da3a660dSBarry Smith idx = A->j + diag[i]; 654da3a660dSBarry Smith v = A->a + diag[i]; 655da3a660dSBarry Smith sum = b[i]; 656da3a660dSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 657da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 658da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 659da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 660da3a660dSBarry Smith v = B->a + B->i[i] - 1; 661da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 662da3a660dSBarry Smith x[i] = omega*(sum/d); 663da3a660dSBarry Smith } 664edd2f0e1SBarry Smith ierr = VecPipelineEnd(xx,mat->lvec,INSERTVALUES,PIPELINEUP, 66578b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 666da3a660dSBarry Smith 667da3a660dSBarry Smith /* t = b - (2*E - D)x */ 668da3a660dSBarry Smith v = A->a; 669da3a660dSBarry Smith for ( i=0; i<m; i++ ) { t[i] = b[i] - scale*(v[*diag++ - 1])*x[i]; } 670da3a660dSBarry Smith 671da3a660dSBarry Smith /* t = (E + L)^{-1}t */ 672da3a660dSBarry Smith ts = t - 1; /* shifted by one for index start of a or mat->j*/ 673da3a660dSBarry Smith diag = A->diag; 674da3a660dSBarry Smith VecSet(&zero,mat->lvec); 67506be10caSBarry Smith ierr = VecPipelineBegin(tt,mat->lvec,INSERTVALUES,PIPELINEDOWN, 67678b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 677da3a660dSBarry Smith for ( i=0; i<m; i++ ) { 678da3a660dSBarry Smith n = diag[i] - A->i[i]; 679da3a660dSBarry Smith idx = A->j + A->i[i] - 1; 680da3a660dSBarry Smith v = A->a + A->i[i] - 1; 681da3a660dSBarry Smith sum = t[i]; 682da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ts,v,idx,n); 683da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 684da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 685da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 686da3a660dSBarry Smith v = B->a + B->i[i] - 1; 687da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 688da3a660dSBarry Smith t[i] = omega*(sum/d); 689da3a660dSBarry Smith } 690edd2f0e1SBarry Smith ierr = VecPipelineEnd(tt,mat->lvec,INSERTVALUES,PIPELINEDOWN, 69178b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 692da3a660dSBarry Smith /* x = x + t */ 693da3a660dSBarry Smith for ( i=0; i<m; i++ ) { x[i] += t[i]; } 694da3a660dSBarry Smith VecDestroy(tt); 695da3a660dSBarry Smith return 0; 696da3a660dSBarry Smith } 697da3a660dSBarry Smith 6981eb62cbbSBarry Smith 699d6dfbf8fSBarry Smith if ((flag & SOR_SYMMETRIC_SWEEP) == SOR_SYMMETRIC_SWEEP){ 700da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 701da3a660dSBarry Smith VecSet(&zero,mat->lvec); VecSet(&zero,xx); 702da3a660dSBarry Smith } 703da3a660dSBarry Smith else { 70406be10caSBarry Smith ierr=VecScatterBegin(xx,mat->lvec,INSERTVALUES,SCATTERUP,mat->Mvctx); 70578b31e54SBarry Smith CHKERRQ(ierr); 70606be10caSBarry Smith ierr = VecScatterEnd(xx,mat->lvec,INSERTVALUES,SCATTERUP,mat->Mvctx); 70778b31e54SBarry Smith CHKERRQ(ierr); 708da3a660dSBarry Smith } 709d6dfbf8fSBarry Smith while (its--) { 710d6dfbf8fSBarry Smith /* go down through the rows */ 71106be10caSBarry Smith ierr = VecPipelineBegin(xx,mat->lvec,INSERTVALUES,PIPELINEDOWN, 71278b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 713d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 714d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 715d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 716d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 717d6dfbf8fSBarry Smith sum = b[i]; 718d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 719d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 720d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 721d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 722d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 723d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 724d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 725d6dfbf8fSBarry Smith } 726edd2f0e1SBarry Smith ierr = VecPipelineEnd(xx,mat->lvec,INSERTVALUES,PIPELINEDOWN, 72778b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 728d6dfbf8fSBarry Smith /* come up through the rows */ 72906be10caSBarry Smith ierr = VecPipelineBegin(xx,mat->lvec,INSERTVALUES,PIPELINEUP, 73078b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 731d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 732d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 733d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 734d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 735d6dfbf8fSBarry Smith sum = b[i]; 736d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 737d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 738d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 739d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 740d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 741d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 742d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 743d6dfbf8fSBarry Smith } 744edd2f0e1SBarry Smith ierr = VecPipelineEnd(xx,mat->lvec,INSERTVALUES,PIPELINEUP, 74578b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 746d6dfbf8fSBarry Smith } 747d6dfbf8fSBarry Smith } 748d6dfbf8fSBarry Smith else if (flag & SOR_FORWARD_SWEEP){ 749da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 750da3a660dSBarry Smith VecSet(&zero,mat->lvec); 75106be10caSBarry Smith ierr = VecPipelineBegin(xx,mat->lvec,INSERTVALUES,PIPELINEDOWN, 75278b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 753da3a660dSBarry Smith for ( i=0; i<m; i++ ) { 754da3a660dSBarry Smith n = diag[i] - A->i[i]; 755da3a660dSBarry Smith idx = A->j + A->i[i] - 1; 756da3a660dSBarry Smith v = A->a + A->i[i] - 1; 757da3a660dSBarry Smith sum = b[i]; 758da3a660dSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 759da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 760da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 761da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 762da3a660dSBarry Smith v = B->a + B->i[i] - 1; 763da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 764da3a660dSBarry Smith x[i] = omega*(sum/d); 765da3a660dSBarry Smith } 766edd2f0e1SBarry Smith ierr = VecPipelineEnd(xx,mat->lvec,INSERTVALUES,PIPELINEDOWN, 76778b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 768da3a660dSBarry Smith its--; 769da3a660dSBarry Smith } 770d6dfbf8fSBarry Smith while (its--) { 77106be10caSBarry Smith ierr=VecScatterBegin(xx,mat->lvec,INSERTVALUES,SCATTERUP,mat->Mvctx); 77278b31e54SBarry Smith CHKERRQ(ierr); 77306be10caSBarry Smith ierr = VecScatterEnd(xx,mat->lvec,INSERTVALUES,SCATTERUP,mat->Mvctx); 77478b31e54SBarry Smith CHKERRQ(ierr); 77506be10caSBarry Smith ierr = VecPipelineBegin(xx,mat->lvec,INSERTVALUES,PIPELINEDOWN, 77678b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 777d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 778d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 779d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 780d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 781d6dfbf8fSBarry Smith sum = b[i]; 782d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 783d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 784d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 785d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 786d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 787d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 788d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 789d6dfbf8fSBarry Smith } 790edd2f0e1SBarry Smith ierr = VecPipelineEnd(xx,mat->lvec,INSERTVALUES,PIPELINEDOWN, 79178b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 792d6dfbf8fSBarry Smith } 793d6dfbf8fSBarry Smith } 794d6dfbf8fSBarry Smith else if (flag & SOR_BACKWARD_SWEEP){ 795da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 796da3a660dSBarry Smith VecSet(&zero,mat->lvec); 79706be10caSBarry Smith ierr = VecPipelineBegin(xx,mat->lvec,INSERTVALUES,PIPELINEUP, 79878b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 799da3a660dSBarry Smith for ( i=m-1; i>-1; i-- ) { 800da3a660dSBarry Smith n = A->i[i+1] - diag[i] - 1; 801da3a660dSBarry Smith idx = A->j + diag[i]; 802da3a660dSBarry Smith v = A->a + diag[i]; 803da3a660dSBarry Smith sum = b[i]; 804da3a660dSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 805da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 806da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 807da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 808da3a660dSBarry Smith v = B->a + B->i[i] - 1; 809da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 810da3a660dSBarry Smith x[i] = omega*(sum/d); 811da3a660dSBarry Smith } 812edd2f0e1SBarry Smith ierr = VecPipelineEnd(xx,mat->lvec,INSERTVALUES,PIPELINEUP, 81378b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 814da3a660dSBarry Smith its--; 815da3a660dSBarry Smith } 816d6dfbf8fSBarry Smith while (its--) { 81706be10caSBarry Smith ierr = VecScatterBegin(xx,mat->lvec,INSERTVALUES,SCATTERDOWN, 81878b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 81906be10caSBarry Smith ierr = VecScatterEnd(xx,mat->lvec,INSERTVALUES,SCATTERDOWN, 82078b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 82106be10caSBarry Smith ierr = VecPipelineBegin(xx,mat->lvec,INSERTVALUES,PIPELINEUP, 82278b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 823d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 824d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 825d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 826d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 827d6dfbf8fSBarry Smith sum = b[i]; 828d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 829d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 830d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 831d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 832d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 833d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 834d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 835d6dfbf8fSBarry Smith } 836edd2f0e1SBarry Smith ierr = VecPipelineEnd(xx,mat->lvec,INSERTVALUES,PIPELINEUP, 83778b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 838d6dfbf8fSBarry Smith } 839d6dfbf8fSBarry Smith } 840d6dfbf8fSBarry Smith else if ((flag & SOR_LOCAL_SYMMETRIC_SWEEP) == SOR_LOCAL_SYMMETRIC_SWEEP){ 841da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 842da3a660dSBarry Smith return MatRelax(mat->A,bb,omega,flag,shift,its,xx); 843da3a660dSBarry Smith } 84406be10caSBarry Smith ierr=VecScatterBegin(xx,mat->lvec,INSERTVALUES,SCATTERALL,mat->Mvctx); 84578b31e54SBarry Smith CHKERRQ(ierr); 84606be10caSBarry Smith ierr = VecScatterEnd(xx,mat->lvec,INSERTVALUES,SCATTERALL,mat->Mvctx); 84778b31e54SBarry Smith CHKERRQ(ierr); 848d6dfbf8fSBarry Smith while (its--) { 849d6dfbf8fSBarry Smith /* go down through the rows */ 850d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 851d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 852d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 853d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 854d6dfbf8fSBarry Smith sum = b[i]; 855d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 856d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 857d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 858d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 859d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 860d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 861d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 862d6dfbf8fSBarry Smith } 863d6dfbf8fSBarry Smith /* come up through the rows */ 864d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 865d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 866d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 867d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 868d6dfbf8fSBarry Smith sum = b[i]; 869d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 870d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 871d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 872d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 873d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 874d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 875d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 876d6dfbf8fSBarry Smith } 877d6dfbf8fSBarry Smith } 878d6dfbf8fSBarry Smith } 879d6dfbf8fSBarry Smith else if (flag & SOR_LOCAL_FORWARD_SWEEP){ 880da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 881da3a660dSBarry Smith return MatRelax(mat->A,bb,omega,flag,shift,its,xx); 882da3a660dSBarry Smith } 88306be10caSBarry Smith ierr=VecScatterBegin(xx,mat->lvec,INSERTVALUES,SCATTERALL,mat->Mvctx); 88478b31e54SBarry Smith CHKERRQ(ierr); 88506be10caSBarry Smith ierr = VecScatterEnd(xx,mat->lvec,INSERTVALUES,SCATTERALL,mat->Mvctx); 88678b31e54SBarry Smith CHKERRQ(ierr); 887d6dfbf8fSBarry Smith while (its--) { 888d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 889d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 890d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 891d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 892d6dfbf8fSBarry Smith sum = b[i]; 893d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 894d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 895d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 896d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 897d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 898d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 899d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 900d6dfbf8fSBarry Smith } 901d6dfbf8fSBarry Smith } 902d6dfbf8fSBarry Smith } 903d6dfbf8fSBarry Smith else if (flag & SOR_LOCAL_BACKWARD_SWEEP){ 904da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 905da3a660dSBarry Smith return MatRelax(mat->A,bb,omega,flag,shift,its,xx); 906da3a660dSBarry Smith } 90706be10caSBarry Smith ierr = VecScatterBegin(xx,mat->lvec,INSERTVALUES,SCATTERALL, 90878b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 90906be10caSBarry Smith ierr = VecScatterEnd(xx,mat->lvec,INSERTVALUES,SCATTERALL, 91078b31e54SBarry Smith mat->Mvctx); CHKERRQ(ierr); 911d6dfbf8fSBarry Smith while (its--) { 912d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 913d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 914d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 915d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 916d6dfbf8fSBarry Smith sum = b[i]; 917d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 918d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 919d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 920d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 921d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 922d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 923d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 924d6dfbf8fSBarry Smith } 925d6dfbf8fSBarry Smith } 926d6dfbf8fSBarry Smith } 9278a729477SBarry Smith return 0; 9288a729477SBarry Smith } 929a66be287SLois Curfman McInnes 930fc76ce87SLois Curfman McInnes static int MatGetInfo_MPIAIJ(Mat matin,MatInfoType flag,int *nz, 931fc76ce87SLois Curfman McInnes int *nzalloc,int *mem) 932a66be287SLois Curfman McInnes { 933a66be287SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 934a66be287SLois Curfman McInnes Mat A = mat->A, B = mat->B; 935a66be287SLois Curfman McInnes int ierr, isend[3], irecv[3], nzA, nzallocA, memA; 936a66be287SLois Curfman McInnes 93778b31e54SBarry Smith ierr = MatGetInfo(A,MAT_LOCAL,&nzA,&nzallocA,&memA); CHKERRQ(ierr); 93878b31e54SBarry Smith ierr = MatGetInfo(B,MAT_LOCAL,&isend[0],&isend[1],&isend[2]); CHKERRQ(ierr); 939a66be287SLois Curfman McInnes isend[0] += nzA; isend[1] += nzallocA; isend[2] += memA; 940a66be287SLois Curfman McInnes if (flag == MAT_LOCAL) { 941a66be287SLois Curfman McInnes *nz = isend[0]; *nzalloc = isend[1]; *mem = isend[2]; 942a66be287SLois Curfman McInnes } else if (flag == MAT_GLOBAL_MAX) { 943a66be287SLois Curfman McInnes MPI_Allreduce((void *) isend,(void *) irecv,3,MPI_INT,MPI_MAX,matin->comm); 944a66be287SLois Curfman McInnes *nz = irecv[0]; *nzalloc = irecv[1]; *mem = irecv[2]; 945a66be287SLois Curfman McInnes } else if (flag == MAT_GLOBAL_SUM) { 946a66be287SLois Curfman McInnes MPI_Allreduce((void *) isend,(void *) irecv,3,MPI_INT,MPI_SUM,matin->comm); 947a66be287SLois Curfman McInnes *nz = irecv[0]; *nzalloc = irecv[1]; *mem = irecv[2]; 948a66be287SLois Curfman McInnes } 949a66be287SLois Curfman McInnes return 0; 950a66be287SLois Curfman McInnes } 951a66be287SLois Curfman McInnes 952299609e3SLois Curfman McInnes extern int MatLUFactorSymbolic_MPIAIJ(Mat,IS,IS,double,Mat*); 953299609e3SLois Curfman McInnes extern int MatLUFactorNumeric_MPIAIJ(Mat,Mat*); 954299609e3SLois Curfman McInnes extern int MatLUFactor_MPIAIJ(Mat,IS,IS,double); 955299609e3SLois Curfman McInnes extern int MatILUFactorSymbolic_MPIAIJ(Mat,IS,IS,double,int,Mat *); 956299609e3SLois Curfman McInnes extern int MatSolve_MPIAIJ(Mat,Vec,Vec); 957299609e3SLois Curfman McInnes extern int MatSolveAdd_MPIAIJ(Mat,Vec,Vec,Vec); 958299609e3SLois Curfman McInnes extern int MatSolveTrans_MPIAIJ(Mat,Vec,Vec); 959299609e3SLois Curfman McInnes extern int MatSolveTransAdd_MPIAIJ(Mat,Vec,Vec,Vec); 960299609e3SLois Curfman McInnes 961fc76ce87SLois Curfman McInnes static int MatSetOption_MPIAIJ(Mat aijin,MatOption op) 962c74985f6SBarry Smith { 96344a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 964c74985f6SBarry Smith 965c74985f6SBarry Smith if (op == NO_NEW_NONZERO_LOCATIONS) { 966c74985f6SBarry Smith MatSetOption(aij->A,op); 967c74985f6SBarry Smith MatSetOption(aij->B,op); 968c74985f6SBarry Smith } 969c74985f6SBarry Smith else if (op == YES_NEW_NONZERO_LOCATIONS) { 970c74985f6SBarry Smith MatSetOption(aij->A,op); 971c74985f6SBarry Smith MatSetOption(aij->B,op); 972c74985f6SBarry Smith } 973bbb6d6a8SBarry Smith else if (op == COLUMN_ORIENTED) 974bbb6d6a8SBarry Smith SETERRQ(1,"MatSetOption_MPIAIJ:Column oriented not supported"); 975c74985f6SBarry Smith return 0; 976c74985f6SBarry Smith } 977c74985f6SBarry Smith 978d1710a03SLois Curfman McInnes static int MatGetSize_MPIAIJ(Mat matin,int *m,int *n) 979c74985f6SBarry Smith { 98044a69424SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 981c74985f6SBarry Smith *m = mat->M; *n = mat->N; 982c74985f6SBarry Smith return 0; 983c74985f6SBarry Smith } 984c74985f6SBarry Smith 985d1710a03SLois Curfman McInnes static int MatGetLocalSize_MPIAIJ(Mat matin,int *m,int *n) 986c74985f6SBarry Smith { 98744a69424SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 988b7c46309SBarry Smith *m = mat->m; *n = mat->N; 989c74985f6SBarry Smith return 0; 990c74985f6SBarry Smith } 991c74985f6SBarry Smith 992d1710a03SLois Curfman McInnes static int MatGetOwnershipRange_MPIAIJ(Mat matin,int *m,int *n) 993c74985f6SBarry Smith { 99444a69424SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 995c74985f6SBarry Smith *m = mat->rstart; *n = mat->rend; 996c74985f6SBarry Smith return 0; 997c74985f6SBarry Smith } 998c74985f6SBarry Smith 99939e00950SLois Curfman McInnes static int MatGetRow_MPIAIJ(Mat matin,int row,int *nz,int **idx,Scalar **v) 100039e00950SLois Curfman McInnes { 1001154123eaSLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 1002154123eaSLois Curfman McInnes Scalar *vworkA, *vworkB, **pvA, **pvB; 1003154123eaSLois Curfman McInnes int i, ierr, *cworkA, *cworkB, **pcA, **pcB, cstart = mat->cstart; 1004154123eaSLois Curfman McInnes int nztot, nzA, nzB, lrow, rstart = mat->rstart, rend = mat->rend; 100539e00950SLois Curfman McInnes 100639e00950SLois Curfman McInnes if (row < rstart || row >= rend) 1007bbb6d6a8SBarry Smith SETERRQ(1,"MatGetRow_MPIAIJ:Currently you can get only local rows") 1008abc0e9e4SLois Curfman McInnes lrow = row - rstart; 100939e00950SLois Curfman McInnes 1010154123eaSLois Curfman McInnes pvA = &vworkA; pcA = &cworkA; pvB = &vworkB; pcB = &cworkB; 1011154123eaSLois Curfman McInnes if (!v) {pvA = 0; pvB = 0;} 1012154123eaSLois Curfman McInnes if (!idx) {pcA = 0; if (!v) pcB = 0;} 101378b31e54SBarry Smith ierr = MatGetRow(mat->A,lrow,&nzA,pcA,pvA); CHKERRQ(ierr); 101478b31e54SBarry Smith ierr = MatGetRow(mat->B,lrow,&nzB,pcB,pvB); CHKERRQ(ierr); 1015154123eaSLois Curfman McInnes nztot = nzA + nzB; 1016154123eaSLois Curfman McInnes 1017154123eaSLois Curfman McInnes if (v || idx) { 1018154123eaSLois Curfman McInnes if (nztot) { 1019154123eaSLois Curfman McInnes /* Sort by increasing column numbers, assuming A and B already sorted */ 1020299609e3SLois Curfman McInnes int imark; 102148b35521SBarry Smith if (mat->assembled) { 1022154123eaSLois Curfman McInnes for (i=0; i<nzB; i++) cworkB[i] = mat->garray[cworkB[i]]; 102348b35521SBarry Smith } 1024154123eaSLois Curfman McInnes if (v) { 102578b31e54SBarry Smith *v = (Scalar *) PETSCMALLOC( (nztot)*sizeof(Scalar) ); CHKPTRQ(*v); 102639e00950SLois Curfman McInnes for ( i=0; i<nzB; i++ ) { 1027154123eaSLois Curfman McInnes if (cworkB[i] < cstart) (*v)[i] = vworkB[i]; 1028154123eaSLois Curfman McInnes else break; 1029154123eaSLois Curfman McInnes } 1030154123eaSLois Curfman McInnes imark = i; 1031154123eaSLois Curfman McInnes for ( i=0; i<nzA; i++ ) (*v)[imark+i] = vworkA[i]; 1032299609e3SLois Curfman McInnes for ( i=imark; i<nzB; i++ ) (*v)[nzA+i] = vworkB[i]; 1033154123eaSLois Curfman McInnes } 1034154123eaSLois Curfman McInnes if (idx) { 103578b31e54SBarry Smith *idx = (int *) PETSCMALLOC( (nztot)*sizeof(int) ); CHKPTRQ(*idx); 1036154123eaSLois Curfman McInnes for (i=0; i<nzA; i++) cworkA[i] += cstart; 1037154123eaSLois Curfman McInnes for ( i=0; i<nzB; i++ ) { 1038154123eaSLois Curfman McInnes if (cworkB[i] < cstart) (*idx)[i] = cworkB[i]; 1039154123eaSLois Curfman McInnes else break; 1040154123eaSLois Curfman McInnes } 1041154123eaSLois Curfman McInnes imark = i; 1042154123eaSLois Curfman McInnes for ( i=0; i<nzA; i++ ) (*idx)[imark+i] = cworkA[i]; 1043299609e3SLois Curfman McInnes for ( i=imark; i<nzB; i++ ) (*idx)[nzA+i] = cworkB[i]; 104439e00950SLois Curfman McInnes } 104539e00950SLois Curfman McInnes } 104639e00950SLois Curfman McInnes else {*idx = 0; *v=0;} 1047154123eaSLois Curfman McInnes } 104839e00950SLois Curfman McInnes *nz = nztot; 104978b31e54SBarry Smith ierr = MatRestoreRow(mat->A,lrow,&nzA,pcA,pvA); CHKERRQ(ierr); 105078b31e54SBarry Smith ierr = MatRestoreRow(mat->B,lrow,&nzB,pcB,pvB); CHKERRQ(ierr); 105139e00950SLois Curfman McInnes return 0; 105239e00950SLois Curfman McInnes } 105339e00950SLois Curfman McInnes 105439e00950SLois Curfman McInnes static int MatRestoreRow_MPIAIJ(Mat mat,int row,int *nz,int **idx,Scalar **v) 105539e00950SLois Curfman McInnes { 105678b31e54SBarry Smith if (idx) PETSCFREE(*idx); 105778b31e54SBarry Smith if (v) PETSCFREE(*v); 105839e00950SLois Curfman McInnes return 0; 105939e00950SLois Curfman McInnes } 106039e00950SLois Curfman McInnes 1061855ac2c5SLois Curfman McInnes static int MatNorm_MPIAIJ(Mat mat,MatNormType type,double *norm) 1062855ac2c5SLois Curfman McInnes { 1063855ac2c5SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 1064855ac2c5SLois Curfman McInnes int ierr; 1065855ac2c5SLois Curfman McInnes if (aij->numtids == 1) { 106614183eadSLois Curfman McInnes ierr = MatNorm(aij->A,type,norm); CHKERRQ(ierr); 1067*37fa93a5SLois Curfman McInnes } else { 1068*37fa93a5SLois Curfman McInnes SETERRQ(1,"MatNorm_MPIAIJ: no parallel norms yet."); 1069*37fa93a5SLois Curfman McInnes } 1070855ac2c5SLois Curfman McInnes return 0; 1071855ac2c5SLois Curfman McInnes } 1072855ac2c5SLois Curfman McInnes 1073b7c46309SBarry Smith static int MatTranspose_MPIAIJ(Mat A,Mat *Bin) 1074b7c46309SBarry Smith { 1075b7c46309SBarry Smith Mat_MPIAIJ *a = (Mat_MPIAIJ *) A->data; 1076b7c46309SBarry Smith int ierr; 1077b7c46309SBarry Smith Mat B; 1078b7c46309SBarry Smith Mat_AIJ *Aloc; 1079b7c46309SBarry Smith int M = a->M, N = a->N,m,*ai,*aj,row,*cols,i,*ct; 1080b7c46309SBarry Smith Scalar *array; 1081b7c46309SBarry Smith 1082b7c46309SBarry Smith ierr = MatCreateMPIAIJ(A->comm,PETSC_DECIDE,PETSC_DECIDE,N,M,0,0,0,0,&B); 1083b7c46309SBarry Smith CHKERRQ(ierr); 1084b7c46309SBarry Smith 1085b7c46309SBarry Smith /* copy over the A part */ 1086b7c46309SBarry Smith Aloc = (Mat_AIJ*) a->A->data; 1087b7c46309SBarry Smith m = Aloc->m; ai = Aloc->i; aj = Aloc->j; array = Aloc->a; 1088b7c46309SBarry Smith row = a->rstart; 1089b7c46309SBarry Smith for ( i=0; i<ai[m]-1; i++ ) {aj[i] += a->cstart - 1;} 1090b7c46309SBarry Smith for ( i=0; i<m; i++ ) { 1091b7c46309SBarry Smith ierr = MatSetValues(B,ai[i+1]-ai[i],aj,1,&row,array,INSERTVALUES); 1092b7c46309SBarry Smith CHKERRQ(ierr); 1093b7c46309SBarry Smith row++; array += ai[i+1]-ai[i]; aj += ai[i+1]-ai[i]; 1094b7c46309SBarry Smith } 1095b7c46309SBarry Smith aj = Aloc->j; 1096b7c46309SBarry Smith for ( i=0; i<ai[m]-1; i++ ) {aj[i] -= a->cstart - 1;} 1097b7c46309SBarry Smith 1098b7c46309SBarry Smith /* copy over the B part */ 1099b7c46309SBarry Smith Aloc = (Mat_AIJ*) a->B->data; 1100b7c46309SBarry Smith m = Aloc->m; ai = Aloc->i; aj = Aloc->j; array = Aloc->a; 1101b7c46309SBarry Smith row = a->rstart; 1102b7c46309SBarry Smith ct = cols = (int *) PETSCMALLOC( (ai[m]+1)*sizeof(int) ); CHKPTRQ(cols); 1103b7c46309SBarry Smith for ( i=0; i<ai[m]-1; i++ ) {cols[i] = a->garray[aj[i]-1];} 1104b7c46309SBarry Smith for ( i=0; i<m; i++ ) { 1105b7c46309SBarry Smith ierr = MatSetValues(B,ai[i+1]-ai[i],cols,1,&row,array,INSERTVALUES); 1106b7c46309SBarry Smith CHKERRQ(ierr); 1107b7c46309SBarry Smith row++; array += ai[i+1]-ai[i]; cols += ai[i+1]-ai[i]; 1108b7c46309SBarry Smith } 1109b7c46309SBarry Smith PETSCFREE(ct); 1110b7c46309SBarry Smith ierr = MatAssemblyBegin(B,FINAL_ASSEMBLY); CHKERRQ(ierr); 1111b7c46309SBarry Smith ierr = MatAssemblyEnd(B,FINAL_ASSEMBLY); CHKERRQ(ierr); 1112b7c46309SBarry Smith *Bin = B; 1113b7c46309SBarry Smith return 0; 1114b7c46309SBarry Smith } 1115b7c46309SBarry Smith 1116fc76ce87SLois Curfman McInnes extern int MatConvert_MPIAIJ(Mat,MatType,Mat *); 1117ff7509f2SBarry Smith static int MatCopyPrivate_MPIAIJ(Mat,Mat *); 1118d6dfbf8fSBarry Smith 11198a729477SBarry Smith /* -------------------------------------------------------------------*/ 11202ee70a88SLois Curfman McInnes static struct _MatOps MatOps = {MatSetValues_MPIAIJ, 112139e00950SLois Curfman McInnes MatGetRow_MPIAIJ,MatRestoreRow_MPIAIJ, 112244a69424SLois Curfman McInnes MatMult_MPIAIJ,MatMultAdd_MPIAIJ, 112344a69424SLois Curfman McInnes MatMultTrans_MPIAIJ,MatMultTransAdd_MPIAIJ, 1124299609e3SLois Curfman McInnes MatSolve_MPIAIJ,MatSolveAdd_MPIAIJ, 1125299609e3SLois Curfman McInnes MatSolveTrans_MPIAIJ,MatSolveTransAdd_MPIAIJ, 1126299609e3SLois Curfman McInnes MatLUFactor_MPIAIJ,0, 112744a69424SLois Curfman McInnes MatRelax_MPIAIJ, 1128b7c46309SBarry Smith MatTranspose_MPIAIJ, 1129a66be287SLois Curfman McInnes MatGetInfo_MPIAIJ,0, 1130855ac2c5SLois Curfman McInnes MatGetDiagonal_MPIAIJ,0,MatNorm_MPIAIJ, 1131ee50ffe9SBarry Smith MatAssemblyBegin_MPIAIJ,MatAssemblyEnd_MPIAIJ, 11321eb62cbbSBarry Smith 0, 1133299609e3SLois Curfman McInnes MatSetOption_MPIAIJ,MatZeroEntries_MPIAIJ,MatZeroRows_MPIAIJ, 1134299609e3SLois Curfman McInnes MatGetReordering_MPIAIJ, 1135299609e3SLois Curfman McInnes MatLUFactorSymbolic_MPIAIJ,MatLUFactorNumeric_MPIAIJ,0,0, 1136d1710a03SLois Curfman McInnes MatGetSize_MPIAIJ,MatGetLocalSize_MPIAIJ,MatGetOwnershipRange_MPIAIJ, 1137299609e3SLois Curfman McInnes MatILUFactorSymbolic_MPIAIJ,0, 1138ff7509f2SBarry Smith 0,0,MatConvert_MPIAIJ,0,0,MatCopyPrivate_MPIAIJ}; 11398a729477SBarry Smith 11408a729477SBarry Smith /*@ 1141ff756334SLois Curfman McInnes MatCreateMPIAIJ - Creates a sparse parallel matrix in AIJ format 1142ff756334SLois Curfman McInnes (the default parallel PETSc format). 11438a729477SBarry Smith 11448a729477SBarry Smith Input Parameters: 11451eb62cbbSBarry Smith . comm - MPI communicator 11467d3e4905SLois Curfman McInnes . m - number of local rows (or PETSC_DECIDE to have calculated if M is given) 11477d3e4905SLois Curfman McInnes . n - number of local columns (or PETSC_DECIDE to have calculated 11487d3e4905SLois Curfman McInnes if N is given) 11497d3e4905SLois Curfman McInnes . M - number of global rows (or PETSC_DECIDE to have calculated if m is given) 11507d3e4905SLois Curfman McInnes . N - number of global columns (or PETSC_DECIDE to have calculated 11517d3e4905SLois Curfman McInnes if n is given) 1152ab693e5aSLois Curfman McInnes . d_nz - number of nonzeros per row in diagonal portion of local submatrix 1153ff756334SLois Curfman McInnes (same for all local rows) 1154ab693e5aSLois Curfman McInnes . d_nzz - number of nonzeros per row in diagonal portion of local submatrix 1155ab693e5aSLois Curfman McInnes or null (possibly different for each row). You must leave room 1156ab693e5aSLois Curfman McInnes for the diagonal entry even if it is zero. 1157ab693e5aSLois Curfman McInnes . o_nz - number of nonzeros per row in off-diagonal portion of local 1158ab693e5aSLois Curfman McInnes submatrix (same for all local rows). 1159ab693e5aSLois Curfman McInnes . o_nzz - number of nonzeros per row in off-diagonal portion of local 1160ab693e5aSLois Curfman McInnes submatrix or null (possibly different for each row). 11618a729477SBarry Smith 1162ff756334SLois Curfman McInnes Output Parameter: 11638a729477SBarry Smith . newmat - the matrix 11648a729477SBarry Smith 1165ff756334SLois Curfman McInnes Notes: 1166ff756334SLois Curfman McInnes The AIJ format (also called the Yale sparse matrix format or 1167ff756334SLois Curfman McInnes compressed row storage), is fully compatible with standard Fortran 77 1168ff756334SLois Curfman McInnes storage. That is, the stored row and column indices begin at 1169ab693e5aSLois Curfman McInnes one, not zero. See the users manual for further details. 1170ff756334SLois Curfman McInnes 1171ff756334SLois Curfman McInnes The user MUST specify either the local or global matrix dimensions 1172ff756334SLois Curfman McInnes (possibly both). 1173ff756334SLois Curfman McInnes 1174e0245417SLois Curfman McInnes Storage Information: 1175e0245417SLois Curfman McInnes For a square global matrix we define each processor's diagonal portion 1176e0245417SLois Curfman McInnes to be its local rows and the corresponding columns (a square submatrix); 1177e0245417SLois Curfman McInnes each processor's off-diagonal portion encompasses the remainder of the 1178e0245417SLois Curfman McInnes local matrix (a rectangular submatrix). 1179e0245417SLois Curfman McInnes 1180e0245417SLois Curfman McInnes The user can specify preallocated storage for the diagonal part of 1181e0245417SLois Curfman McInnes the local submatrix with either d_nz or d_nnz (not both). Set both 1182e0245417SLois Curfman McInnes d_nz and d_nnz to zero for PETSc to control dynamic memory allocation. 1183e0245417SLois Curfman McInnes Likewise, specify preallocated storage for the off-diagonal part of 1184e0245417SLois Curfman McInnes the local submatrix with o_nz or o_nnz (not both). 1185ff756334SLois Curfman McInnes 1186dbd7a890SLois Curfman McInnes .keywords: matrix, aij, compressed row, sparse, parallel 1187ff756334SLois Curfman McInnes 1188dbd7a890SLois Curfman McInnes .seealso: MatCreate(), MatCreateSequentialAIJ(), MatSetValues() 11898a729477SBarry Smith @*/ 11901eb62cbbSBarry Smith int MatCreateMPIAIJ(MPI_Comm comm,int m,int n,int M,int N, 11911eb62cbbSBarry Smith int d_nz,int *d_nnz, int o_nz,int *o_nnz,Mat *newmat) 11928a729477SBarry Smith { 11938a729477SBarry Smith Mat mat; 119444a69424SLois Curfman McInnes Mat_MPIAIJ *aij; 11956abc6512SBarry Smith int ierr, i,sum[2],work[2]; 11968a729477SBarry Smith *newmat = 0; 119744a69424SLois Curfman McInnes PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATMPIAIJ,comm); 1198a5a9c739SBarry Smith PLogObjectCreate(mat); 119978b31e54SBarry Smith mat->data = (void *) (aij = PETSCNEW(Mat_MPIAIJ)); CHKPTRQ(aij); 12008a729477SBarry Smith mat->ops = &MatOps; 120144a69424SLois Curfman McInnes mat->destroy = MatDestroy_MPIAIJ; 120244a69424SLois Curfman McInnes mat->view = MatView_MPIAIJ; 12038a729477SBarry Smith mat->factor = 0; 1204d6dfbf8fSBarry Smith 120507a0e7adSLois Curfman McInnes aij->insertmode = NOTSETVALUES; 12061eb62cbbSBarry Smith MPI_Comm_rank(comm,&aij->mytid); 12071eb62cbbSBarry Smith MPI_Comm_size(comm,&aij->numtids); 12081eb62cbbSBarry Smith 1209dbd7a890SLois Curfman McInnes if (M == PETSC_DECIDE || N == PETSC_DECIDE) { 12101eb62cbbSBarry Smith work[0] = m; work[1] = n; 1211d6dfbf8fSBarry Smith MPI_Allreduce((void *) work,(void *) sum,2,MPI_INT,MPI_SUM,comm ); 1212dbd7a890SLois Curfman McInnes if (M == PETSC_DECIDE) M = sum[0]; 1213dbd7a890SLois Curfman McInnes if (N == PETSC_DECIDE) N = sum[1]; 12141eb62cbbSBarry Smith } 1215dbd7a890SLois Curfman McInnes if (m == PETSC_DECIDE) 1216dbd7a890SLois Curfman McInnes {m = M/aij->numtids + ((M % aij->numtids) > aij->mytid);} 1217dbd7a890SLois Curfman McInnes if (n == PETSC_DECIDE) 1218dbd7a890SLois Curfman McInnes {n = N/aij->numtids + ((N % aij->numtids) > aij->mytid);} 12198a729477SBarry Smith aij->m = m; 12208a729477SBarry Smith aij->n = n; 12211eb62cbbSBarry Smith aij->N = N; 12221eb62cbbSBarry Smith aij->M = M; 12231eb62cbbSBarry Smith 12241eb62cbbSBarry Smith /* build local table of row and column ownerships */ 122578b31e54SBarry Smith aij->rowners = (int *) PETSCMALLOC(2*(aij->numtids+2)*sizeof(int)); 122678b31e54SBarry Smith CHKPTRQ(aij->rowners); 1227464493b3SBarry Smith PLogObjectMemory(mat,2*(aij->numtids+2)*sizeof(int)+sizeof(struct _Mat)+ 1228464493b3SBarry Smith sizeof(Mat_MPIAIJ)); 12291eb62cbbSBarry Smith aij->cowners = aij->rowners + aij->numtids + 1; 12301eb62cbbSBarry Smith MPI_Allgather(&m,1,MPI_INT,aij->rowners+1,1,MPI_INT,comm); 12311eb62cbbSBarry Smith aij->rowners[0] = 0; 12321eb62cbbSBarry Smith for ( i=2; i<=aij->numtids; i++ ) { 12331eb62cbbSBarry Smith aij->rowners[i] += aij->rowners[i-1]; 12348a729477SBarry Smith } 12351eb62cbbSBarry Smith aij->rstart = aij->rowners[aij->mytid]; 12361eb62cbbSBarry Smith aij->rend = aij->rowners[aij->mytid+1]; 12371eb62cbbSBarry Smith MPI_Allgather(&n,1,MPI_INT,aij->cowners+1,1,MPI_INT,comm); 12381eb62cbbSBarry Smith aij->cowners[0] = 0; 12391eb62cbbSBarry Smith for ( i=2; i<=aij->numtids; i++ ) { 12401eb62cbbSBarry Smith aij->cowners[i] += aij->cowners[i-1]; 12418a729477SBarry Smith } 12421eb62cbbSBarry Smith aij->cstart = aij->cowners[aij->mytid]; 12431eb62cbbSBarry Smith aij->cend = aij->cowners[aij->mytid+1]; 12448a729477SBarry Smith 12458a729477SBarry Smith 12466b5873e3SBarry Smith ierr = MatCreateSequentialAIJ(MPI_COMM_SELF,m,n,d_nz,d_nnz,&aij->A); 124778b31e54SBarry Smith CHKERRQ(ierr); 1248a5a9c739SBarry Smith PLogObjectParent(mat,aij->A); 12496b5873e3SBarry Smith ierr = MatCreateSequentialAIJ(MPI_COMM_SELF,m,N,o_nz,o_nnz,&aij->B); 125078b31e54SBarry Smith CHKERRQ(ierr); 1251a5a9c739SBarry Smith PLogObjectParent(mat,aij->B); 12528a729477SBarry Smith 12531eb62cbbSBarry Smith /* build cache for off array entries formed */ 125478b31e54SBarry Smith ierr = StashBuild_Private(&aij->stash); CHKERRQ(ierr); 12559e25ed09SBarry Smith aij->colmap = 0; 12569e25ed09SBarry Smith aij->garray = 0; 12578a729477SBarry Smith 12581eb62cbbSBarry Smith /* stuff used for matrix vector multiply */ 12591eb62cbbSBarry Smith aij->lvec = 0; 12601eb62cbbSBarry Smith aij->Mvctx = 0; 1261d6dfbf8fSBarry Smith aij->assembled = 0; 12628a729477SBarry Smith 1263d6dfbf8fSBarry Smith *newmat = mat; 1264d6dfbf8fSBarry Smith return 0; 1265d6dfbf8fSBarry Smith } 1266c74985f6SBarry Smith 1267ff7509f2SBarry Smith static int MatCopyPrivate_MPIAIJ(Mat matin,Mat *newmat) 1268d6dfbf8fSBarry Smith { 1269d6dfbf8fSBarry Smith Mat mat; 127044a69424SLois Curfman McInnes Mat_MPIAIJ *aij,*oldmat = (Mat_MPIAIJ *) matin->data; 12712ee70a88SLois Curfman McInnes int ierr, len; 1272d6dfbf8fSBarry Smith *newmat = 0; 1273d6dfbf8fSBarry Smith 1274bbb6d6a8SBarry Smith if (!oldmat->assembled) 1275bbb6d6a8SBarry Smith SETERRQ(1,"MatCopyPrivate_MPIAIJ:Cannot copy unassembled matrix"); 127644a69424SLois Curfman McInnes PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATMPIAIJ,matin->comm); 1277a5a9c739SBarry Smith PLogObjectCreate(mat); 127878b31e54SBarry Smith mat->data = (void *) (aij = PETSCNEW(Mat_MPIAIJ)); CHKPTRQ(aij); 1279d6dfbf8fSBarry Smith mat->ops = &MatOps; 128044a69424SLois Curfman McInnes mat->destroy = MatDestroy_MPIAIJ; 128144a69424SLois Curfman McInnes mat->view = MatView_MPIAIJ; 1282d6dfbf8fSBarry Smith mat->factor = matin->factor; 1283d6dfbf8fSBarry Smith 1284d6dfbf8fSBarry Smith aij->m = oldmat->m; 1285d6dfbf8fSBarry Smith aij->n = oldmat->n; 1286d6dfbf8fSBarry Smith aij->M = oldmat->M; 1287d6dfbf8fSBarry Smith aij->N = oldmat->N; 1288d6dfbf8fSBarry Smith 1289d6dfbf8fSBarry Smith aij->assembled = 1; 1290d6dfbf8fSBarry Smith aij->rstart = oldmat->rstart; 1291d6dfbf8fSBarry Smith aij->rend = oldmat->rend; 1292d6dfbf8fSBarry Smith aij->cstart = oldmat->cstart; 1293d6dfbf8fSBarry Smith aij->cend = oldmat->cend; 1294d6dfbf8fSBarry Smith aij->numtids = oldmat->numtids; 1295d6dfbf8fSBarry Smith aij->mytid = oldmat->mytid; 129607a0e7adSLois Curfman McInnes aij->insertmode = NOTSETVALUES; 1297d6dfbf8fSBarry Smith 129878b31e54SBarry Smith aij->rowners = (int *) PETSCMALLOC( (aij->numtids+1)*sizeof(int) ); 129978b31e54SBarry Smith CHKPTRQ(aij->rowners); 1300464493b3SBarry Smith PLogObjectMemory(mat,(aij->numtids+1)*sizeof(int)+sizeof(struct _Mat)+ 1301464493b3SBarry Smith sizeof(Mat_MPIAIJ)); 130278b31e54SBarry Smith PETSCMEMCPY(aij->rowners,oldmat->rowners,(aij->numtids+1)*sizeof(int)); 130378b31e54SBarry Smith ierr = StashInitialize_Private(&aij->stash); CHKERRQ(ierr); 13042ee70a88SLois Curfman McInnes if (oldmat->colmap) { 130578b31e54SBarry Smith aij->colmap = (int *) PETSCMALLOC( (aij->N)*sizeof(int) ); 130678b31e54SBarry Smith CHKPTRQ(aij->colmap); 1307464493b3SBarry Smith PLogObjectMemory(mat,(aij->N)*sizeof(int)); 130878b31e54SBarry Smith PETSCMEMCPY(aij->colmap,oldmat->colmap,(aij->N)*sizeof(int)); 13092ee70a88SLois Curfman McInnes } else aij->colmap = 0; 13102ee70a88SLois Curfman McInnes if (oldmat->garray && (len = ((Mat_AIJ *) (oldmat->B->data))->n)) { 131178b31e54SBarry Smith aij->garray = (int *) PETSCMALLOC(len*sizeof(int) ); CHKPTRQ(aij->garray); 1312464493b3SBarry Smith PLogObjectMemory(mat,len*sizeof(int)); 131378b31e54SBarry Smith PETSCMEMCPY(aij->garray,oldmat->garray,len*sizeof(int)); 13142ee70a88SLois Curfman McInnes } else aij->garray = 0; 1315d6dfbf8fSBarry Smith 131678b31e54SBarry Smith ierr = VecDuplicate(oldmat->lvec,&aij->lvec); CHKERRQ(ierr); 1317a5a9c739SBarry Smith PLogObjectParent(mat,aij->lvec); 131878b31e54SBarry Smith ierr = VecScatterCtxCopy(oldmat->Mvctx,&aij->Mvctx); CHKERRQ(ierr); 1319a5a9c739SBarry Smith PLogObjectParent(mat,aij->Mvctx); 132078b31e54SBarry Smith ierr = MatConvert(oldmat->A,MATSAME,&aij->A); CHKERRQ(ierr); 1321a5a9c739SBarry Smith PLogObjectParent(mat,aij->A); 132278b31e54SBarry Smith ierr = MatConvert(oldmat->B,MATSAME,&aij->B); CHKERRQ(ierr); 1323a5a9c739SBarry Smith PLogObjectParent(mat,aij->B); 13248a729477SBarry Smith *newmat = mat; 13258a729477SBarry Smith return 0; 13268a729477SBarry Smith } 1327