1cb512458SBarry Smith #ifndef lint 2*6b5873e3SBarry Smith static char vcid[] = "$Id: mpiaij.c,v 1.26 1995/04/05 20:31:57 bsmith Exp bsmith $"; 3cb512458SBarry Smith #endif 48a729477SBarry Smith 51eb62cbbSBarry Smith #include "mpiaij.h" 68a729477SBarry Smith #include "vec/vecimpl.h" 7d6dfbf8fSBarry Smith #include "inline/spops.h" 88a729477SBarry Smith 91eb62cbbSBarry Smith #define CHUNCKSIZE 100 101eb62cbbSBarry Smith /* 111eb62cbbSBarry Smith This is a simple minded stash. Do a linear search to determine if 121eb62cbbSBarry Smith in stash, if not add to end. 131eb62cbbSBarry Smith */ 141eb62cbbSBarry Smith static int StashValues(Stash *stash,int row,int n, int *idxn, 151eb62cbbSBarry Smith Scalar *values,InsertMode addv) 168a729477SBarry Smith { 171eb62cbbSBarry Smith int i,j,N = stash->n,found,*n_idx, *n_idy; 181eb62cbbSBarry Smith Scalar val,*n_array; 198a729477SBarry Smith 201eb62cbbSBarry Smith for ( i=0; i<n; i++ ) { 211eb62cbbSBarry Smith found = 0; 221eb62cbbSBarry Smith val = *values++; 238a729477SBarry Smith for ( j=0; j<N; j++ ) { 241eb62cbbSBarry Smith if ( stash->idx[j] == row && stash->idy[j] == idxn[i]) { 251eb62cbbSBarry Smith /* found a match */ 261eb62cbbSBarry Smith if (addv == AddValues) stash->array[j] += val; 271eb62cbbSBarry Smith else stash->array[j] = val; 281eb62cbbSBarry Smith found = 1; 298a729477SBarry Smith break; 308a729477SBarry Smith } 318a729477SBarry Smith } 321eb62cbbSBarry Smith if (!found) { /* not found so add to end */ 331eb62cbbSBarry Smith if ( stash->n == stash->nmax ) { 341eb62cbbSBarry Smith /* allocate a larger stash */ 351eb62cbbSBarry Smith n_array = (Scalar *) MALLOC( (stash->nmax + CHUNCKSIZE)*( 361eb62cbbSBarry Smith 2*sizeof(int) + sizeof(Scalar))); 371eb62cbbSBarry Smith CHKPTR(n_array); 381eb62cbbSBarry Smith n_idx = (int *) (n_array + stash->nmax + CHUNCKSIZE); 391eb62cbbSBarry Smith n_idy = (int *) (n_idx + stash->nmax + CHUNCKSIZE); 401eb62cbbSBarry Smith MEMCPY(n_array,stash->array,stash->nmax*sizeof(Scalar)); 411eb62cbbSBarry Smith MEMCPY(n_idx,stash->idx,stash->nmax*sizeof(int)); 421eb62cbbSBarry Smith MEMCPY(n_idy,stash->idy,stash->nmax*sizeof(int)); 431eb62cbbSBarry Smith if (stash->array) FREE(stash->array); 441eb62cbbSBarry Smith stash->array = n_array; stash->idx = n_idx; stash->idy = n_idy; 451eb62cbbSBarry Smith stash->nmax += CHUNCKSIZE; 461eb62cbbSBarry Smith } 471eb62cbbSBarry Smith stash->array[stash->n] = val; 481eb62cbbSBarry Smith stash->idx[stash->n] = row; 491eb62cbbSBarry Smith stash->idy[stash->n++] = idxn[i]; 501eb62cbbSBarry Smith } 518a729477SBarry Smith } 528a729477SBarry Smith return 0; 538a729477SBarry Smith } 548a729477SBarry Smith 559e25ed09SBarry Smith /* local utility routine that creates a mapping from the global column 569e25ed09SBarry Smith number to the local number in the off-diagonal part of the local 579e25ed09SBarry Smith storage of the matrix. This is done in a non scable way since the 589e25ed09SBarry Smith length of colmap equals the global matrix length. 599e25ed09SBarry Smith */ 609e25ed09SBarry Smith static int CreateColmap(Mat mat) 619e25ed09SBarry Smith { 6244a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 6344a69424SLois Curfman McInnes Mat_AIJ *B = (Mat_AIJ*) aij->B->data; 649e25ed09SBarry Smith int n = B->n,i; 659e25ed09SBarry Smith aij->colmap = (int *) MALLOC( aij->N*sizeof(int) ); CHKPTR(aij->colmap); 669e25ed09SBarry Smith MEMSET(aij->colmap,0,aij->N*sizeof(int)); 67abc0e9e4SLois Curfman McInnes for ( i=0; i<n; i++ ) aij->colmap[aij->garray[i]] = i+1; 689e25ed09SBarry Smith return 0; 699e25ed09SBarry Smith } 709e25ed09SBarry Smith 712ee70a88SLois Curfman McInnes static int MatSetValues_MPIAIJ(Mat mat,int m,int *idxm,int n, 721eb62cbbSBarry Smith int *idxn,Scalar *v,InsertMode addv) 738a729477SBarry Smith { 7444a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 751eb62cbbSBarry Smith int ierr,i,j, rstart = aij->rstart, rend = aij->rend; 761eb62cbbSBarry Smith int cstart = aij->cstart, cend = aij->cend,row,col; 778a729477SBarry Smith 781eb62cbbSBarry Smith if (aij->insertmode != NotSetValues && aij->insertmode != addv) { 791eb62cbbSBarry Smith SETERR(1,"You cannot mix inserts and adds"); 808a729477SBarry Smith } 811eb62cbbSBarry Smith aij->insertmode = addv; 828a729477SBarry Smith for ( i=0; i<m; i++ ) { 83da3a660dSBarry Smith if (idxm[i] < 0) SETERR(1,"Negative row index"); 84da3a660dSBarry Smith if (idxm[i] >= aij->M) SETERR(1,"Row index too large"); 851eb62cbbSBarry Smith if (idxm[i] >= rstart && idxm[i] < rend) { 861eb62cbbSBarry Smith row = idxm[i] - rstart; 871eb62cbbSBarry Smith for ( j=0; j<n; j++ ) { 88da3a660dSBarry Smith if (idxn[j] < 0) SETERR(1,"Negative column index"); 89da3a660dSBarry Smith if (idxn[j] >= aij->N) SETERR(1,"Column index too large"); 901eb62cbbSBarry Smith if (idxn[j] >= cstart && idxn[j] < cend){ 911eb62cbbSBarry Smith col = idxn[j] - cstart; 921eb62cbbSBarry Smith ierr = MatSetValues(aij->A,1,&row,1,&col,v+i*n+j,addv);CHKERR(ierr); 931eb62cbbSBarry Smith } 941eb62cbbSBarry Smith else { 95d6dfbf8fSBarry Smith if (aij->assembled) { 969e25ed09SBarry Smith if (!aij->colmap) {ierr = CreateColmap(mat); CHKERR(ierr);} 979e25ed09SBarry Smith col = aij->colmap[idxn[j]] - 1; 989e25ed09SBarry Smith if (col < 0) { 999e25ed09SBarry Smith SETERR(1,"Cannot insert new off diagonal block nonzero in\ 1009e25ed09SBarry Smith already\ 101d6dfbf8fSBarry Smith assembled matrix. Contact petsc-maint@mcs.anl.gov\ 102d6dfbf8fSBarry Smith if your need this feature"); 103d6dfbf8fSBarry Smith } 1049e25ed09SBarry Smith } 1059e25ed09SBarry Smith else col = idxn[j]; 1061eb62cbbSBarry Smith ierr = MatSetValues(aij->B,1,&row,1,&col,v+i*n+j,addv);CHKERR(ierr); 1071eb62cbbSBarry Smith } 1081eb62cbbSBarry Smith } 1091eb62cbbSBarry Smith } 1101eb62cbbSBarry Smith else { 1111eb62cbbSBarry Smith ierr = StashValues(&aij->stash,idxm[i],n,idxn,v+i*n,addv);CHKERR(ierr); 1121eb62cbbSBarry Smith } 1138a729477SBarry Smith } 1148a729477SBarry Smith return 0; 1158a729477SBarry Smith } 1168a729477SBarry Smith 1178a729477SBarry Smith /* 1181eb62cbbSBarry Smith the assembly code is alot like the code for vectors, we should 1191eb62cbbSBarry Smith sometime derive a single assembly code that can be used for 1201eb62cbbSBarry Smith either case. 1218a729477SBarry Smith */ 1228a729477SBarry Smith 1235e42470aSBarry Smith static int MatBeginAssembly_MPIAIJ(Mat mat,int mode) 1248a729477SBarry Smith { 12544a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 126d6dfbf8fSBarry Smith MPI_Comm comm = mat->comm; 1276abc6512SBarry Smith int numtids = aij->numtids, *owners = aij->rowners; 1281eb62cbbSBarry Smith int mytid = aij->mytid; 1291eb62cbbSBarry Smith MPI_Request *send_waits,*recv_waits; 1306abc6512SBarry Smith int *nprocs,i,j,idx,*procs,nsends,nreceives,nmax,*work; 1311eb62cbbSBarry Smith int tag = 50, *owner,*starts,count; 1321eb62cbbSBarry Smith InsertMode addv; 1331eb62cbbSBarry Smith Scalar *rvalues,*svalues; 1341eb62cbbSBarry Smith 1351eb62cbbSBarry Smith /* make sure all processors are either in INSERTMODE or ADDMODE */ 13628988994SBarry Smith MPI_Allreduce((void *) &aij->insertmode,(void *) &addv,1,MPI_INT, 1371eb62cbbSBarry Smith MPI_BOR,comm); 1381eb62cbbSBarry Smith if (addv == (AddValues|InsertValues)) { 1391eb62cbbSBarry Smith SETERR(1,"Some processors have inserted while others have added"); 1401eb62cbbSBarry Smith } 1411eb62cbbSBarry Smith aij->insertmode = addv; /* in case this processor had no cache */ 1421eb62cbbSBarry Smith 1431eb62cbbSBarry Smith /* first count number of contributors to each processor */ 1441eb62cbbSBarry Smith nprocs = (int *) MALLOC( 2*numtids*sizeof(int) ); CHKPTR(nprocs); 1451eb62cbbSBarry Smith MEMSET(nprocs,0,2*numtids*sizeof(int)); procs = nprocs + numtids; 1461eb62cbbSBarry Smith owner = (int *) MALLOC( (aij->stash.n+1)*sizeof(int) ); CHKPTR(owner); 1471eb62cbbSBarry Smith for ( i=0; i<aij->stash.n; i++ ) { 1481eb62cbbSBarry Smith idx = aij->stash.idx[i]; 1491eb62cbbSBarry Smith for ( j=0; j<numtids; j++ ) { 1501eb62cbbSBarry Smith if (idx >= owners[j] && idx < owners[j+1]) { 1511eb62cbbSBarry Smith nprocs[j]++; procs[j] = 1; owner[i] = j; break; 1528a729477SBarry Smith } 1538a729477SBarry Smith } 1548a729477SBarry Smith } 1551eb62cbbSBarry Smith nsends = 0; for ( i=0; i<numtids; i++ ) { nsends += procs[i];} 1561eb62cbbSBarry Smith 1571eb62cbbSBarry Smith /* inform other processors of number of messages and max length*/ 1581eb62cbbSBarry Smith work = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(work); 1591eb62cbbSBarry Smith MPI_Allreduce((void *) procs,(void *) work,numtids,MPI_INT,MPI_SUM,comm); 1601eb62cbbSBarry Smith nreceives = work[mytid]; 1611eb62cbbSBarry Smith MPI_Allreduce((void *) nprocs,(void *) work,numtids,MPI_INT,MPI_MAX,comm); 1621eb62cbbSBarry Smith nmax = work[mytid]; 1631eb62cbbSBarry Smith FREE(work); 1641eb62cbbSBarry Smith 1651eb62cbbSBarry Smith /* post receives: 1661eb62cbbSBarry Smith 1) each message will consist of ordered pairs 1671eb62cbbSBarry Smith (global index,value) we store the global index as a double 168d6dfbf8fSBarry Smith to simplify the message passing. 1691eb62cbbSBarry Smith 2) since we don't know how long each individual message is we 1701eb62cbbSBarry Smith allocate the largest needed buffer for each receive. Potentially 1711eb62cbbSBarry Smith this is a lot of wasted space. 1721eb62cbbSBarry Smith 1731eb62cbbSBarry Smith 1741eb62cbbSBarry Smith This could be done better. 1751eb62cbbSBarry Smith */ 17628988994SBarry Smith rvalues = (Scalar *) MALLOC(3*(nreceives+1)*(nmax+1)*sizeof(Scalar)); 1771eb62cbbSBarry Smith CHKPTR(rvalues); 1781eb62cbbSBarry Smith recv_waits = (MPI_Request *) MALLOC((nreceives+1)*sizeof(MPI_Request)); 1791eb62cbbSBarry Smith CHKPTR(recv_waits); 1801eb62cbbSBarry Smith for ( i=0; i<nreceives; i++ ) { 1811eb62cbbSBarry Smith MPI_Irecv((void *)(rvalues+3*nmax*i),3*nmax,MPI_SCALAR,MPI_ANY_SOURCE,tag, 1821eb62cbbSBarry Smith comm,recv_waits+i); 1831eb62cbbSBarry Smith } 1841eb62cbbSBarry Smith 1851eb62cbbSBarry Smith /* do sends: 1861eb62cbbSBarry Smith 1) starts[i] gives the starting index in svalues for stuff going to 1871eb62cbbSBarry Smith the ith processor 1881eb62cbbSBarry Smith */ 1891eb62cbbSBarry Smith svalues = (Scalar *) MALLOC( 3*(aij->stash.n+1)*sizeof(Scalar) ); 1901eb62cbbSBarry Smith CHKPTR(svalues); 1911eb62cbbSBarry Smith send_waits = (MPI_Request *) MALLOC( (nsends+1)*sizeof(MPI_Request)); 1921eb62cbbSBarry Smith CHKPTR(send_waits); 1931eb62cbbSBarry Smith starts = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(starts); 1941eb62cbbSBarry Smith starts[0] = 0; 1951eb62cbbSBarry Smith for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 1961eb62cbbSBarry Smith for ( i=0; i<aij->stash.n; i++ ) { 1971eb62cbbSBarry Smith svalues[3*starts[owner[i]]] = (Scalar) aij->stash.idx[i]; 1981eb62cbbSBarry Smith svalues[3*starts[owner[i]]+1] = (Scalar) aij->stash.idy[i]; 1991eb62cbbSBarry Smith svalues[3*(starts[owner[i]]++)+2] = aij->stash.array[i]; 2001eb62cbbSBarry Smith } 2011eb62cbbSBarry Smith FREE(owner); 2021eb62cbbSBarry Smith starts[0] = 0; 2031eb62cbbSBarry Smith for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 2041eb62cbbSBarry Smith count = 0; 2051eb62cbbSBarry Smith for ( i=0; i<numtids; i++ ) { 2061eb62cbbSBarry Smith if (procs[i]) { 2071eb62cbbSBarry Smith MPI_Isend((void*)(svalues+3*starts[i]),3*nprocs[i],MPI_SCALAR,i,tag, 2081eb62cbbSBarry Smith comm,send_waits+count++); 2091eb62cbbSBarry Smith } 2101eb62cbbSBarry Smith } 2111eb62cbbSBarry Smith FREE(starts); FREE(nprocs); 2121eb62cbbSBarry Smith 2131eb62cbbSBarry Smith /* Free cache space */ 2141eb62cbbSBarry Smith aij->stash.nmax = aij->stash.n = 0; 2151eb62cbbSBarry Smith if (aij->stash.array){ FREE(aij->stash.array); aij->stash.array = 0;} 2161eb62cbbSBarry Smith 2171eb62cbbSBarry Smith aij->svalues = svalues; aij->rvalues = rvalues; 2181eb62cbbSBarry Smith aij->nsends = nsends; aij->nrecvs = nreceives; 2191eb62cbbSBarry Smith aij->send_waits = send_waits; aij->recv_waits = recv_waits; 2201eb62cbbSBarry Smith aij->rmax = nmax; 2211eb62cbbSBarry Smith 2221eb62cbbSBarry Smith return 0; 2231eb62cbbSBarry Smith } 22444a69424SLois Curfman McInnes extern int MatSetUpMultiply_MPIAIJ(Mat); 2251eb62cbbSBarry Smith 2265e42470aSBarry Smith static int MatEndAssembly_MPIAIJ(Mat mat,int mode) 2271eb62cbbSBarry Smith { 2281eb62cbbSBarry Smith int ierr; 22944a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 2301eb62cbbSBarry Smith 2311eb62cbbSBarry Smith MPI_Status *send_status,recv_status; 2326abc6512SBarry Smith int imdex,nrecvs = aij->nrecvs, count = nrecvs, i, n; 2331eb62cbbSBarry Smith int row,col; 2341eb62cbbSBarry Smith Scalar *values,val; 2351eb62cbbSBarry Smith InsertMode addv = aij->insertmode; 2361eb62cbbSBarry Smith 2371eb62cbbSBarry Smith /* wait on receives */ 2381eb62cbbSBarry Smith while (count) { 239d6dfbf8fSBarry Smith MPI_Waitany(nrecvs,aij->recv_waits,&imdex,&recv_status); 2401eb62cbbSBarry Smith /* unpack receives into our local space */ 241d6dfbf8fSBarry Smith values = aij->rvalues + 3*imdex*aij->rmax; 2421eb62cbbSBarry Smith MPI_Get_count(&recv_status,MPI_SCALAR,&n); 2431eb62cbbSBarry Smith n = n/3; 2441eb62cbbSBarry Smith for ( i=0; i<n; i++ ) { 2451eb62cbbSBarry Smith row = (int) PETSCREAL(values[3*i]) - aij->rstart; 2461eb62cbbSBarry Smith col = (int) PETSCREAL(values[3*i+1]); 2471eb62cbbSBarry Smith val = values[3*i+2]; 2481eb62cbbSBarry Smith if (col >= aij->cstart && col < aij->cend) { 2491eb62cbbSBarry Smith col -= aij->cstart; 2501eb62cbbSBarry Smith MatSetValues(aij->A,1,&row,1,&col,&val,addv); 2511eb62cbbSBarry Smith } 2521eb62cbbSBarry Smith else { 253d6dfbf8fSBarry Smith if (aij->assembled) { 2549e25ed09SBarry Smith if (!aij->colmap) {ierr = CreateColmap(mat); CHKERR(ierr);} 2559e25ed09SBarry Smith col = aij->colmap[col] - 1; 2569e25ed09SBarry Smith if (col < 0) { 2579e25ed09SBarry Smith SETERR(1,"Cannot insert new off diagonal block nonzero in\ 2589e25ed09SBarry Smith already\ 259d6dfbf8fSBarry Smith assembled matrix. Contact petsc-maint@mcs.anl.gov\ 260d6dfbf8fSBarry Smith if your need this feature"); 261d6dfbf8fSBarry Smith } 2629e25ed09SBarry Smith } 2631eb62cbbSBarry Smith MatSetValues(aij->B,1,&row,1,&col,&val,addv); 2641eb62cbbSBarry Smith } 2651eb62cbbSBarry Smith } 2661eb62cbbSBarry Smith count--; 2671eb62cbbSBarry Smith } 2681eb62cbbSBarry Smith FREE(aij->recv_waits); FREE(aij->rvalues); 2691eb62cbbSBarry Smith 2701eb62cbbSBarry Smith /* wait on sends */ 2711eb62cbbSBarry Smith if (aij->nsends) { 2721eb62cbbSBarry Smith send_status = (MPI_Status *) MALLOC( aij->nsends*sizeof(MPI_Status) ); 2731eb62cbbSBarry Smith CHKPTR(send_status); 2741eb62cbbSBarry Smith MPI_Waitall(aij->nsends,aij->send_waits,send_status); 2751eb62cbbSBarry Smith FREE(send_status); 2761eb62cbbSBarry Smith } 2771eb62cbbSBarry Smith FREE(aij->send_waits); FREE(aij->svalues); 2781eb62cbbSBarry Smith 2791eb62cbbSBarry Smith aij->insertmode = NotSetValues; 2805e42470aSBarry Smith ierr = MatBeginAssembly(aij->A,mode); CHKERR(ierr); 2815e42470aSBarry Smith ierr = MatEndAssembly(aij->A,mode); CHKERR(ierr); 2821eb62cbbSBarry Smith 2835e42470aSBarry Smith if (!aij->assembled && mode == FINAL_ASSEMBLY) { 284d3c9fed9SLois Curfman McInnes ierr = MatSetUpMultiply_MPIAIJ(mat); CHKERR(ierr); 285d6dfbf8fSBarry Smith aij->assembled = 1; 2865e42470aSBarry Smith } 2875e42470aSBarry Smith ierr = MatBeginAssembly(aij->B,mode); CHKERR(ierr); 2885e42470aSBarry Smith ierr = MatEndAssembly(aij->B,mode); CHKERR(ierr); 2895e42470aSBarry Smith 2908a729477SBarry Smith return 0; 2918a729477SBarry Smith } 2928a729477SBarry Smith 2932ee70a88SLois Curfman McInnes static int MatZeroEntries_MPIAIJ(Mat A) 2941eb62cbbSBarry Smith { 29544a69424SLois Curfman McInnes Mat_MPIAIJ *l = (Mat_MPIAIJ *) A->data; 2961eb62cbbSBarry Smith 2971eb62cbbSBarry Smith MatZeroEntries(l->A); MatZeroEntries(l->B); 2981eb62cbbSBarry Smith return 0; 2991eb62cbbSBarry Smith } 3001eb62cbbSBarry Smith 3011eb62cbbSBarry Smith /* again this uses the same basic stratagy as in the assembly and 3021eb62cbbSBarry Smith scatter create routines, we should try to do it systemamatically 3031eb62cbbSBarry Smith if we can figure out the proper level of generality. */ 3041eb62cbbSBarry Smith 3051eb62cbbSBarry Smith /* the code does not do the diagonal entries correctly unless the 3061eb62cbbSBarry Smith matrix is square and the column and row owerships are identical. 3071eb62cbbSBarry Smith This is a BUG. The only way to fix it seems to be to access 3081eb62cbbSBarry Smith aij->A and aij->B directly and not through the MatZeroRows() 3091eb62cbbSBarry Smith routine. 3101eb62cbbSBarry Smith */ 31144a69424SLois Curfman McInnes static int MatZeroRows_MPIAIJ(Mat A,IS is,Scalar *diag) 3121eb62cbbSBarry Smith { 31344a69424SLois Curfman McInnes Mat_MPIAIJ *l = (Mat_MPIAIJ *) A->data; 3141eb62cbbSBarry Smith int i,ierr,N, *rows,*owners = l->rowners,numtids = l->numtids; 3156abc6512SBarry Smith int *procs,*nprocs,j,found,idx,nsends,*work; 3161eb62cbbSBarry Smith int nmax,*svalues,*starts,*owner,nrecvs,mytid = l->mytid; 3176abc6512SBarry Smith int *rvalues,tag = 67,count,base,slen,n,*source; 318d6dfbf8fSBarry Smith int *lens,imdex,*lrows,*values; 319d6dfbf8fSBarry Smith MPI_Comm comm = A->comm; 3201eb62cbbSBarry Smith MPI_Request *send_waits,*recv_waits; 3211eb62cbbSBarry Smith MPI_Status recv_status,*send_status; 3221eb62cbbSBarry Smith IS istmp; 3231eb62cbbSBarry Smith 32444a69424SLois Curfman McInnes if (!l->assembled) SETERR(1,"MatZeroRows_MPIAIJ: must assemble matrix first"); 3251eb62cbbSBarry Smith ierr = ISGetLocalSize(is,&N); CHKERR(ierr); 3261eb62cbbSBarry Smith ierr = ISGetIndices(is,&rows); CHKERR(ierr); 3271eb62cbbSBarry Smith 3281eb62cbbSBarry Smith /* first count number of contributors to each processor */ 3291eb62cbbSBarry Smith nprocs = (int *) MALLOC( 2*numtids*sizeof(int) ); CHKPTR(nprocs); 3301eb62cbbSBarry Smith MEMSET(nprocs,0,2*numtids*sizeof(int)); procs = nprocs + numtids; 3311eb62cbbSBarry Smith owner = (int *) MALLOC((N+1)*sizeof(int)); CHKPTR(owner); /* see note*/ 3321eb62cbbSBarry Smith for ( i=0; i<N; i++ ) { 3331eb62cbbSBarry Smith idx = rows[i]; 3341eb62cbbSBarry Smith found = 0; 3351eb62cbbSBarry Smith for ( j=0; j<numtids; j++ ) { 3361eb62cbbSBarry Smith if (idx >= owners[j] && idx < owners[j+1]) { 3371eb62cbbSBarry Smith nprocs[j]++; procs[j] = 1; owner[i] = j; found = 1; break; 3381eb62cbbSBarry Smith } 3391eb62cbbSBarry Smith } 340d6dfbf8fSBarry Smith if (!found) SETERR(1,"Imdex out of range"); 3411eb62cbbSBarry Smith } 3421eb62cbbSBarry Smith nsends = 0; for ( i=0; i<numtids; i++ ) { nsends += procs[i];} 3431eb62cbbSBarry Smith 3441eb62cbbSBarry Smith /* inform other processors of number of messages and max length*/ 3451eb62cbbSBarry Smith work = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(work); 3461eb62cbbSBarry Smith MPI_Allreduce((void *) procs,(void *) work,numtids,MPI_INT,MPI_SUM,comm); 3471eb62cbbSBarry Smith nrecvs = work[mytid]; 3481eb62cbbSBarry Smith MPI_Allreduce((void *) nprocs,(void *) work,numtids,MPI_INT,MPI_MAX,comm); 3491eb62cbbSBarry Smith nmax = work[mytid]; 3501eb62cbbSBarry Smith FREE(work); 3511eb62cbbSBarry Smith 3521eb62cbbSBarry Smith /* post receives: */ 35328988994SBarry Smith rvalues = (int *) MALLOC((nrecvs+1)*(nmax+1)*sizeof(int)); /*see note */ 3541eb62cbbSBarry Smith CHKPTR(rvalues); 3551eb62cbbSBarry Smith recv_waits = (MPI_Request *) MALLOC((nrecvs+1)*sizeof(MPI_Request)); 3561eb62cbbSBarry Smith CHKPTR(recv_waits); 3571eb62cbbSBarry Smith for ( i=0; i<nrecvs; i++ ) { 3581eb62cbbSBarry Smith MPI_Irecv((void *)(rvalues+nmax*i),nmax,MPI_INT,MPI_ANY_SOURCE,tag, 3591eb62cbbSBarry Smith comm,recv_waits+i); 3601eb62cbbSBarry Smith } 3611eb62cbbSBarry Smith 3621eb62cbbSBarry Smith /* do sends: 3631eb62cbbSBarry Smith 1) starts[i] gives the starting index in svalues for stuff going to 3641eb62cbbSBarry Smith the ith processor 3651eb62cbbSBarry Smith */ 3661eb62cbbSBarry Smith svalues = (int *) MALLOC( (N+1)*sizeof(int) ); CHKPTR(svalues); 3671eb62cbbSBarry Smith send_waits = (MPI_Request *) MALLOC( (nsends+1)*sizeof(MPI_Request)); 3681eb62cbbSBarry Smith CHKPTR(send_waits); 3691eb62cbbSBarry Smith starts = (int *) MALLOC( (numtids+1)*sizeof(int) ); CHKPTR(starts); 3701eb62cbbSBarry Smith starts[0] = 0; 3711eb62cbbSBarry Smith for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 3721eb62cbbSBarry Smith for ( i=0; i<N; i++ ) { 3731eb62cbbSBarry Smith svalues[starts[owner[i]]++] = rows[i]; 3741eb62cbbSBarry Smith } 3751eb62cbbSBarry Smith ISRestoreIndices(is,&rows); 3761eb62cbbSBarry Smith 3771eb62cbbSBarry Smith starts[0] = 0; 3781eb62cbbSBarry Smith for ( i=1; i<numtids+1; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 3791eb62cbbSBarry Smith count = 0; 3801eb62cbbSBarry Smith for ( i=0; i<numtids; i++ ) { 3811eb62cbbSBarry Smith if (procs[i]) { 3821eb62cbbSBarry Smith MPI_Isend((void*)(svalues+starts[i]),nprocs[i],MPI_INT,i,tag, 3831eb62cbbSBarry Smith comm,send_waits+count++); 3841eb62cbbSBarry Smith } 3851eb62cbbSBarry Smith } 3861eb62cbbSBarry Smith FREE(starts); 3871eb62cbbSBarry Smith 3881eb62cbbSBarry Smith base = owners[mytid]; 3891eb62cbbSBarry Smith 3901eb62cbbSBarry Smith /* wait on receives */ 3911eb62cbbSBarry Smith lens = (int *) MALLOC( 2*(nrecvs+1)*sizeof(int) ); CHKPTR(lens); 3921eb62cbbSBarry Smith source = lens + nrecvs; 3931eb62cbbSBarry Smith count = nrecvs; slen = 0; 3941eb62cbbSBarry Smith while (count) { 395d6dfbf8fSBarry Smith MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status); 3961eb62cbbSBarry Smith /* unpack receives into our local space */ 3971eb62cbbSBarry Smith MPI_Get_count(&recv_status,MPI_INT,&n); 398d6dfbf8fSBarry Smith source[imdex] = recv_status.MPI_SOURCE; 399d6dfbf8fSBarry Smith lens[imdex] = n; 4001eb62cbbSBarry Smith slen += n; 4011eb62cbbSBarry Smith count--; 4021eb62cbbSBarry Smith } 4031eb62cbbSBarry Smith FREE(recv_waits); 4041eb62cbbSBarry Smith 4051eb62cbbSBarry Smith /* move the data into the send scatter */ 4061eb62cbbSBarry Smith lrows = (int *) MALLOC( slen*sizeof(int) ); CHKPTR(lrows); 4071eb62cbbSBarry Smith count = 0; 4081eb62cbbSBarry Smith for ( i=0; i<nrecvs; i++ ) { 4091eb62cbbSBarry Smith values = rvalues + i*nmax; 4101eb62cbbSBarry Smith for ( j=0; j<lens[i]; j++ ) { 4111eb62cbbSBarry Smith lrows[count++] = values[j] - base; 4121eb62cbbSBarry Smith } 4131eb62cbbSBarry Smith } 4141eb62cbbSBarry Smith FREE(rvalues); FREE(lens); 4151eb62cbbSBarry Smith FREE(owner); FREE(nprocs); 4161eb62cbbSBarry Smith 4171eb62cbbSBarry Smith /* actually zap the local rows */ 418*6b5873e3SBarry Smith ierr = ISCreateSequential(MPI_COMM_SELF,slen,lrows,&istmp); 419*6b5873e3SBarry Smith CHKERR(ierr); FREE(lrows); 4201eb62cbbSBarry Smith ierr = MatZeroRows(l->A,istmp,diag); CHKERR(ierr); 4211eb62cbbSBarry Smith ierr = MatZeroRows(l->B,istmp,0); CHKERR(ierr); 4221eb62cbbSBarry Smith ierr = ISDestroy(istmp); CHKERR(ierr); 4231eb62cbbSBarry Smith 4241eb62cbbSBarry Smith /* wait on sends */ 4251eb62cbbSBarry Smith if (nsends) { 4261eb62cbbSBarry Smith send_status = (MPI_Status *) MALLOC( nsends*sizeof(MPI_Status) ); 4271eb62cbbSBarry Smith CHKPTR(send_status); 4281eb62cbbSBarry Smith MPI_Waitall(nsends,send_waits,send_status); 4291eb62cbbSBarry Smith FREE(send_status); 4301eb62cbbSBarry Smith } 4311eb62cbbSBarry Smith FREE(send_waits); FREE(svalues); 4321eb62cbbSBarry Smith 4331eb62cbbSBarry Smith 4341eb62cbbSBarry Smith return 0; 4351eb62cbbSBarry Smith } 4361eb62cbbSBarry Smith 43744a69424SLois Curfman McInnes static int MatMult_MPIAIJ(Mat aijin,Vec xx,Vec yy) 4381eb62cbbSBarry Smith { 43944a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 4401eb62cbbSBarry Smith int ierr; 44144a69424SLois Curfman McInnes if (!aij->assembled) SETERR(1,"MatMult_MPIAIJ: must assemble matrix first"); 442d6dfbf8fSBarry Smith ierr = VecScatterBegin(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx); 4431eb62cbbSBarry Smith CHKERR(ierr); 4441eb62cbbSBarry Smith ierr = MatMult(aij->A,xx,yy); CHKERR(ierr); 445d6dfbf8fSBarry Smith ierr = VecScatterEnd(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx); 446d6dfbf8fSBarry Smith CHKERR(ierr); 4471eb62cbbSBarry Smith ierr = MatMultAdd(aij->B,aij->lvec,yy,yy); CHKERR(ierr); 4481eb62cbbSBarry Smith return 0; 4491eb62cbbSBarry Smith } 4501eb62cbbSBarry Smith 45144a69424SLois Curfman McInnes static int MatMultAdd_MPIAIJ(Mat aijin,Vec xx,Vec yy,Vec zz) 452da3a660dSBarry Smith { 45344a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 454da3a660dSBarry Smith int ierr; 45544a69424SLois Curfman McInnes if (!aij->assembled) SETERR(1,"MatMult_MPIAIJ: must assemble matrix first"); 456da3a660dSBarry Smith ierr = VecScatterBegin(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx); 457da3a660dSBarry Smith CHKERR(ierr); 458da3a660dSBarry Smith ierr = MatMultAdd(aij->A,xx,yy,zz); CHKERR(ierr); 459da3a660dSBarry Smith ierr = VecScatterEnd(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx); 460da3a660dSBarry Smith CHKERR(ierr); 461da3a660dSBarry Smith ierr = MatMultAdd(aij->B,aij->lvec,zz,zz); CHKERR(ierr); 462da3a660dSBarry Smith return 0; 463da3a660dSBarry Smith } 464da3a660dSBarry Smith 46544a69424SLois Curfman McInnes static int MatMultTrans_MPIAIJ(Mat aijin,Vec xx,Vec yy) 466da3a660dSBarry Smith { 46744a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 468da3a660dSBarry Smith int ierr; 469da3a660dSBarry Smith 47044a69424SLois Curfman McInnes if (!aij->assembled) 47144a69424SLois Curfman McInnes SETERR(1,"MatMulTrans_MPIAIJ: must assemble matrix first"); 472da3a660dSBarry Smith /* do nondiagonal part */ 473da3a660dSBarry Smith ierr = MatMultTrans(aij->B,xx,aij->lvec); CHKERR(ierr); 474da3a660dSBarry Smith /* send it on its way */ 475da3a660dSBarry Smith ierr = VecScatterBegin(aij->lvec,0,yy,0,AddValues, 476da3a660dSBarry Smith ScatterAll|ScatterReverse,aij->Mvctx); CHKERR(ierr); 477da3a660dSBarry Smith /* do local part */ 478da3a660dSBarry Smith ierr = MatMultTrans(aij->A,xx,yy); CHKERR(ierr); 479da3a660dSBarry Smith /* receive remote parts: note this assumes the values are not actually */ 480da3a660dSBarry Smith /* inserted in yy until the next line, which is true for my implementation*/ 481da3a660dSBarry Smith /* but is not perhaps always true. */ 482da3a660dSBarry Smith ierr = VecScatterEnd(aij->lvec,0,yy,0,AddValues,ScatterAll|ScatterReverse, 483da3a660dSBarry Smith aij->Mvctx); CHKERR(ierr); 484da3a660dSBarry Smith return 0; 485da3a660dSBarry Smith } 486da3a660dSBarry Smith 48744a69424SLois Curfman McInnes static int MatMultTransAdd_MPIAIJ(Mat aijin,Vec xx,Vec yy,Vec zz) 488da3a660dSBarry Smith { 48944a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 490da3a660dSBarry Smith int ierr; 491da3a660dSBarry Smith 49244a69424SLois Curfman McInnes if (!aij->assembled) 49344a69424SLois Curfman McInnes SETERR(1,"MatMulTransAdd_MPIAIJ: must assemble matrix first"); 494da3a660dSBarry Smith /* do nondiagonal part */ 495da3a660dSBarry Smith ierr = MatMultTrans(aij->B,xx,aij->lvec); CHKERR(ierr); 496da3a660dSBarry Smith /* send it on its way */ 497da3a660dSBarry Smith ierr = VecScatterBegin(aij->lvec,0,zz,0,AddValues, 498da3a660dSBarry Smith ScatterAll|ScatterReverse,aij->Mvctx); CHKERR(ierr); 499da3a660dSBarry Smith /* do local part */ 500da3a660dSBarry Smith ierr = MatMultTransAdd(aij->A,xx,yy,zz); CHKERR(ierr); 501da3a660dSBarry Smith /* receive remote parts: note this assumes the values are not actually */ 502da3a660dSBarry Smith /* inserted in yy until the next line, which is true for my implementation*/ 503da3a660dSBarry Smith /* but is not perhaps always true. */ 504da3a660dSBarry Smith ierr = VecScatterEnd(aij->lvec,0,zz,0,AddValues,ScatterAll|ScatterReverse, 505da3a660dSBarry Smith aij->Mvctx); CHKERR(ierr); 506da3a660dSBarry Smith return 0; 507da3a660dSBarry Smith } 508da3a660dSBarry Smith 5091eb62cbbSBarry Smith /* 5101eb62cbbSBarry Smith This only works correctly for square matrices where the subblock A->A is the 5111eb62cbbSBarry Smith diagonal block 5121eb62cbbSBarry Smith */ 513d1710a03SLois Curfman McInnes static int MatGetDiagonal_MPIAIJ(Mat Ain,Vec v) 5141eb62cbbSBarry Smith { 51544a69424SLois Curfman McInnes Mat_MPIAIJ *A = (Mat_MPIAIJ *) Ain->data; 51644a69424SLois Curfman McInnes if (!A->assembled) SETERR(1,"MatGetDiag_MPIAIJ: must assemble matrix first"); 5171eb62cbbSBarry Smith return MatGetDiagonal(A->A,v); 5181eb62cbbSBarry Smith } 5191eb62cbbSBarry Smith 52044a69424SLois Curfman McInnes static int MatDestroy_MPIAIJ(PetscObject obj) 5211eb62cbbSBarry Smith { 5221eb62cbbSBarry Smith Mat mat = (Mat) obj; 52344a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 5241eb62cbbSBarry Smith int ierr; 525a5a9c739SBarry Smith #if defined(PETSC_LOG) 526a5a9c739SBarry Smith PLogObjectState(obj,"Rows %d Cols %d",aij->M,aij->N); 527a5a9c739SBarry Smith #endif 5281eb62cbbSBarry Smith FREE(aij->rowners); 5291eb62cbbSBarry Smith ierr = MatDestroy(aij->A); CHKERR(ierr); 5301eb62cbbSBarry Smith ierr = MatDestroy(aij->B); CHKERR(ierr); 5319e25ed09SBarry Smith if (aij->colmap) FREE(aij->colmap); 5329e25ed09SBarry Smith if (aij->garray) FREE(aij->garray); 5331eb62cbbSBarry Smith if (aij->lvec) VecDestroy(aij->lvec); 5341eb62cbbSBarry Smith if (aij->Mvctx) VecScatterCtxDestroy(aij->Mvctx); 535a5a9c739SBarry Smith FREE(aij); 536a5a9c739SBarry Smith PLogObjectDestroy(mat); 537a5a9c739SBarry Smith PETSCHEADERDESTROY(mat); 5381eb62cbbSBarry Smith return 0; 5391eb62cbbSBarry Smith } 5401eb62cbbSBarry Smith 54144a69424SLois Curfman McInnes static int MatView_MPIAIJ(PetscObject obj,Viewer viewer) 5421eb62cbbSBarry Smith { 5431eb62cbbSBarry Smith Mat mat = (Mat) obj; 54444a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 5451eb62cbbSBarry Smith int ierr; 546d13ab20cSBarry Smith PetscObject vobj = (PetscObject) viewer; 5471eb62cbbSBarry Smith 548154123eaSLois Curfman McInnes if (!viewer) { /* so that viewers may be used from debuggers */ 549154123eaSLois Curfman McInnes viewer = STDOUT_VIEWER; vobj = (PetscObject) viewer; 550154123eaSLois Curfman McInnes } 55144a69424SLois Curfman McInnes if (!aij->assembled) SETERR(1,"MatView_MPIAIJ: must assemble matrix first"); 552d13ab20cSBarry Smith if (vobj->cookie == VIEWER_COOKIE) { 553d13ab20cSBarry Smith FILE *fd = ViewerFileGetPointer(viewer); 554d13ab20cSBarry Smith if (vobj->type == FILE_VIEWER) { 555d6dfbf8fSBarry Smith MPE_Seq_begin(mat->comm,1); 556d13ab20cSBarry Smith fprintf(fd,"[%d] rows %d starts %d ends %d cols %d starts %d ends %d\n", 5571eb62cbbSBarry Smith aij->mytid,aij->m,aij->rstart,aij->rend,aij->n,aij->cstart, 5581eb62cbbSBarry Smith aij->cend); 559da69df5fSBarry Smith ierr = MatView(aij->A,viewer); CHKERR(ierr); 560da69df5fSBarry Smith ierr = MatView(aij->B,viewer); CHKERR(ierr); 561d13ab20cSBarry Smith fflush(fd); 562d6dfbf8fSBarry Smith MPE_Seq_end(mat->comm,1); 563d13ab20cSBarry Smith } 56495373324SBarry Smith else if (vobj->type == FILES_VIEWER) { 56595373324SBarry Smith int numtids = aij->numtids, mytid = aij->mytid; 56695373324SBarry Smith if (numtids == 1) { 56795373324SBarry Smith ierr = MatView(aij->A,viewer); CHKERR(ierr); 56895373324SBarry Smith } 56995373324SBarry Smith else { 57095373324SBarry Smith /* assemble the entire matrix onto first processor. */ 57195373324SBarry Smith Mat A; 5722ee70a88SLois Curfman McInnes Mat_AIJ *Aloc; 5732eb8c8abSBarry Smith int M = aij->M, N = aij->N,m,*ai,*aj,row,*cols,i,*ct; 57495373324SBarry Smith Scalar *a; 5752ee70a88SLois Curfman McInnes 57695373324SBarry Smith if (!mytid) { 57795373324SBarry Smith ierr = MatCreateMPIAIJ(mat->comm,M,N,M,N,0,0,0,0,&A); 57895373324SBarry Smith } 57995373324SBarry Smith else { 58095373324SBarry Smith ierr = MatCreateMPIAIJ(mat->comm,0,0,M,N,0,0,0,0,&A); 58195373324SBarry Smith } 58295373324SBarry Smith CHKERR(ierr); 58395373324SBarry Smith 58495373324SBarry Smith /* copy over the A part */ 5852ee70a88SLois Curfman McInnes Aloc = (Mat_AIJ*) aij->A->data; 5862ee70a88SLois Curfman McInnes m = Aloc->m; ai = Aloc->i; aj = Aloc->j; a = Aloc->a; 58795373324SBarry Smith row = aij->rstart; 58895373324SBarry Smith for ( i=0; i<ai[m]; i++ ) {aj[i] += aij->cstart - 1;} 58995373324SBarry Smith for ( i=0; i<m; i++ ) { 59095373324SBarry Smith ierr = MatSetValues(A,1,&row,ai[i+1]-ai[i],aj,a,InsertValues); 59195373324SBarry Smith CHKERR(ierr); 59295373324SBarry Smith row++; a += ai[i+1]-ai[i]; aj += ai[i+1]-ai[i]; 59395373324SBarry Smith } 5942ee70a88SLois Curfman McInnes aj = Aloc->j; 59595373324SBarry Smith for ( i=0; i<ai[m]; i++ ) {aj[i] -= aij->cstart - 1;} 59695373324SBarry Smith 59795373324SBarry Smith /* copy over the B part */ 5982ee70a88SLois Curfman McInnes Aloc = (Mat_AIJ*) aij->B->data; 5992ee70a88SLois Curfman McInnes m = Aloc->m; ai = Aloc->i; aj = Aloc->j; a = Aloc->a; 60095373324SBarry Smith row = aij->rstart; 60195373324SBarry Smith ct = cols = (int *) MALLOC( (ai[m]+1)*sizeof(int) ); CHKPTR(cols); 60295373324SBarry Smith for ( i=0; i<ai[m]; i++ ) {cols[i] = aij->garray[aj[i]-1];} 60395373324SBarry Smith for ( i=0; i<m; i++ ) { 60495373324SBarry Smith ierr = MatSetValues(A,1,&row,ai[i+1]-ai[i],cols,a,InsertValues); 60595373324SBarry Smith CHKERR(ierr); 60695373324SBarry Smith row++; a += ai[i+1]-ai[i]; cols += ai[i+1]-ai[i]; 60795373324SBarry Smith } 60895373324SBarry Smith FREE(ct); 6095e42470aSBarry Smith ierr = MatBeginAssembly(A,FINAL_ASSEMBLY); CHKERR(ierr); 6105e42470aSBarry Smith ierr = MatEndAssembly(A,FINAL_ASSEMBLY); CHKERR(ierr); 61195373324SBarry Smith if (!mytid) { 61295373324SBarry Smith ierr = MatView(((Mat_MPIAIJ*)(A->data))->A,viewer); CHKERR(ierr); 61395373324SBarry Smith } 61495373324SBarry Smith ierr = MatDestroy(A); CHKERR(ierr); 61595373324SBarry Smith } 61695373324SBarry Smith } 617d13ab20cSBarry Smith } 6181eb62cbbSBarry Smith return 0; 6191eb62cbbSBarry Smith } 6201eb62cbbSBarry Smith 621d3c9fed9SLois Curfman McInnes extern int MatMarkDiag_AIJ(Mat_AIJ *); 6221eb62cbbSBarry Smith /* 6231eb62cbbSBarry Smith This has to provide several versions. 6241eb62cbbSBarry Smith 6251eb62cbbSBarry Smith 1) per sequential 6261eb62cbbSBarry Smith 2) a) use only local smoothing updating outer values only once. 6271eb62cbbSBarry Smith b) local smoothing updating outer values each inner iteration 628d6dfbf8fSBarry Smith 3) color updating out values betwen colors. 6291eb62cbbSBarry Smith */ 63044a69424SLois Curfman McInnes static int MatRelax_MPIAIJ(Mat matin,Vec bb,double omega,int flag,double shift, 6318a729477SBarry Smith int its,Vec xx) 6328a729477SBarry Smith { 63344a69424SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 634d6dfbf8fSBarry Smith Mat AA = mat->A, BB = mat->B; 63544a69424SLois Curfman McInnes Mat_AIJ *A = (Mat_AIJ *) AA->data, *B = (Mat_AIJ *)BB->data; 6366abc6512SBarry Smith Scalar zero = 0.0,*b,*x,*xs,*ls,d,*v,sum,scale,*t,*ts; 6376abc6512SBarry Smith int ierr,*idx, *diag; 6386abc6512SBarry Smith int n = mat->n, m = mat->m, i; 639da3a660dSBarry Smith Vec tt; 6408a729477SBarry Smith 64144a69424SLois Curfman McInnes if (!mat->assembled) SETERR(1,"MatRelax_MPIAIJ: must assemble matrix first"); 6421eb62cbbSBarry Smith 643d6dfbf8fSBarry Smith VecGetArray(xx,&x); VecGetArray(bb,&b); VecGetArray(mat->lvec,&ls); 644d6dfbf8fSBarry Smith xs = x -1; /* shift by one for index start of 1 */ 645da3a660dSBarry Smith ls--; 646d3c9fed9SLois Curfman McInnes if (!A->diag) {if ((ierr = MatMarkDiag_AIJ(A))) return ierr;} 647d6dfbf8fSBarry Smith diag = A->diag; 648acb40c82SBarry Smith if (flag == SOR_APPLY_UPPER || flag == SOR_APPLY_LOWER) { 649acb40c82SBarry Smith SETERR(1,"That option not yet support for parallel AIJ matrices"); 650acb40c82SBarry Smith } 651da3a660dSBarry Smith if (flag & SOR_EISENSTAT) { 652da3a660dSBarry Smith /* Let A = L + U + D; where L is lower trianglar, 653da3a660dSBarry Smith U is upper triangular, E is diagonal; This routine applies 654da3a660dSBarry Smith 655da3a660dSBarry Smith (L + E)^{-1} A (U + E)^{-1} 656da3a660dSBarry Smith 657da3a660dSBarry Smith to a vector efficiently using Eisenstat's trick. This is for 658da3a660dSBarry Smith the case of SSOR preconditioner, so E is D/omega where omega 659da3a660dSBarry Smith is the relaxation factor. 660da3a660dSBarry Smith */ 661da3a660dSBarry Smith ierr = VecCreate(xx,&tt); CHKERR(ierr); 662da3a660dSBarry Smith VecGetArray(tt,&t); 663da3a660dSBarry Smith scale = (2.0/omega) - 1.0; 664da3a660dSBarry Smith /* x = (E + U)^{-1} b */ 665da3a660dSBarry Smith VecSet(&zero,mat->lvec); 666da3a660dSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp, 667da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 668da3a660dSBarry Smith for ( i=m-1; i>-1; i-- ) { 669da3a660dSBarry Smith n = A->i[i+1] - diag[i] - 1; 670da3a660dSBarry Smith idx = A->j + diag[i]; 671da3a660dSBarry Smith v = A->a + diag[i]; 672da3a660dSBarry Smith sum = b[i]; 673da3a660dSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 674da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 675da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 676da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 677da3a660dSBarry Smith v = B->a + B->i[i] - 1; 678da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 679da3a660dSBarry Smith x[i] = omega*(sum/d); 680da3a660dSBarry Smith } 681da3a660dSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp, 682da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 683da3a660dSBarry Smith 684da3a660dSBarry Smith /* t = b - (2*E - D)x */ 685da3a660dSBarry Smith v = A->a; 686da3a660dSBarry Smith for ( i=0; i<m; i++ ) { t[i] = b[i] - scale*(v[*diag++ - 1])*x[i]; } 687da3a660dSBarry Smith 688da3a660dSBarry Smith /* t = (E + L)^{-1}t */ 689da3a660dSBarry Smith ts = t - 1; /* shifted by one for index start of a or mat->j*/ 690da3a660dSBarry Smith diag = A->diag; 691da3a660dSBarry Smith VecSet(&zero,mat->lvec); 692da3a660dSBarry Smith ierr = VecPipelineBegin(tt,0,mat->lvec,0,InsertValues,PipelineDown, 693da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 694da3a660dSBarry Smith for ( i=0; i<m; i++ ) { 695da3a660dSBarry Smith n = diag[i] - A->i[i]; 696da3a660dSBarry Smith idx = A->j + A->i[i] - 1; 697da3a660dSBarry Smith v = A->a + A->i[i] - 1; 698da3a660dSBarry Smith sum = t[i]; 699da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ts,v,idx,n); 700da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 701da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 702da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 703da3a660dSBarry Smith v = B->a + B->i[i] - 1; 704da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 705da3a660dSBarry Smith t[i] = omega*(sum/d); 706da3a660dSBarry Smith } 707da3a660dSBarry Smith ierr = VecPipelineEnd(tt,0,mat->lvec,0,InsertValues,PipelineDown, 708da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 709da3a660dSBarry Smith /* x = x + t */ 710da3a660dSBarry Smith for ( i=0; i<m; i++ ) { x[i] += t[i]; } 711da3a660dSBarry Smith VecDestroy(tt); 712da3a660dSBarry Smith return 0; 713da3a660dSBarry Smith } 714da3a660dSBarry Smith 7151eb62cbbSBarry Smith 716d6dfbf8fSBarry Smith if ((flag & SOR_SYMMETRIC_SWEEP) == SOR_SYMMETRIC_SWEEP){ 717da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 718da3a660dSBarry Smith VecSet(&zero,mat->lvec); VecSet(&zero,xx); 719da3a660dSBarry Smith } 720da3a660dSBarry Smith else { 721d6dfbf8fSBarry Smith ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx); 722d6dfbf8fSBarry Smith CHKERR(ierr); 723d6dfbf8fSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx); 724d6dfbf8fSBarry Smith CHKERR(ierr); 725da3a660dSBarry Smith } 726d6dfbf8fSBarry Smith while (its--) { 727d6dfbf8fSBarry Smith /* go down through the rows */ 728d6dfbf8fSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown, 729d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 730d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 731d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 732d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 733d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 734d6dfbf8fSBarry Smith sum = b[i]; 735d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 736d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 737d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 738d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 739d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 740d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 741d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 742d6dfbf8fSBarry Smith } 743d6dfbf8fSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown, 744d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 745d6dfbf8fSBarry Smith /* come up through the rows */ 746d6dfbf8fSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp, 747d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 748d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 749d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 750d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 751d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 752d6dfbf8fSBarry Smith sum = b[i]; 753d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 754d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 755d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 756d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 757d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 758d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 759d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 760d6dfbf8fSBarry Smith } 761d6dfbf8fSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp, 762d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 763d6dfbf8fSBarry Smith } 764d6dfbf8fSBarry Smith } 765d6dfbf8fSBarry Smith else if (flag & SOR_FORWARD_SWEEP){ 766da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 767da3a660dSBarry Smith VecSet(&zero,mat->lvec); 768da3a660dSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown, 769da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 770da3a660dSBarry Smith for ( i=0; i<m; i++ ) { 771da3a660dSBarry Smith n = diag[i] - A->i[i]; 772da3a660dSBarry Smith idx = A->j + A->i[i] - 1; 773da3a660dSBarry Smith v = A->a + A->i[i] - 1; 774da3a660dSBarry Smith sum = b[i]; 775da3a660dSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 776da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 777da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 778da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 779da3a660dSBarry Smith v = B->a + B->i[i] - 1; 780da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 781da3a660dSBarry Smith x[i] = omega*(sum/d); 782da3a660dSBarry Smith } 783da3a660dSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown, 784da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 785da3a660dSBarry Smith its--; 786da3a660dSBarry Smith } 787d6dfbf8fSBarry Smith while (its--) { 788d6dfbf8fSBarry Smith ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx); 789d6dfbf8fSBarry Smith CHKERR(ierr); 790d6dfbf8fSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx); 791d6dfbf8fSBarry Smith CHKERR(ierr); 792d6dfbf8fSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown, 793d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 794d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 795d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 796d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 797d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 798d6dfbf8fSBarry Smith sum = b[i]; 799d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 800d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 801d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 802d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 803d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 804d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 805d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 806d6dfbf8fSBarry Smith } 807d6dfbf8fSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown, 808d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 809d6dfbf8fSBarry Smith } 810d6dfbf8fSBarry Smith } 811d6dfbf8fSBarry Smith else if (flag & SOR_BACKWARD_SWEEP){ 812da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 813da3a660dSBarry Smith VecSet(&zero,mat->lvec); 814da3a660dSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp, 815da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 816da3a660dSBarry Smith for ( i=m-1; i>-1; i-- ) { 817da3a660dSBarry Smith n = A->i[i+1] - diag[i] - 1; 818da3a660dSBarry Smith idx = A->j + diag[i]; 819da3a660dSBarry Smith v = A->a + diag[i]; 820da3a660dSBarry Smith sum = b[i]; 821da3a660dSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 822da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 823da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 824da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 825da3a660dSBarry Smith v = B->a + B->i[i] - 1; 826da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 827da3a660dSBarry Smith x[i] = omega*(sum/d); 828da3a660dSBarry Smith } 829da3a660dSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp, 830da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 831da3a660dSBarry Smith its--; 832da3a660dSBarry Smith } 833d6dfbf8fSBarry Smith while (its--) { 834d6dfbf8fSBarry Smith ierr = VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterDown, 835d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 836d6dfbf8fSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterDown, 837d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 838d6dfbf8fSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp, 839d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 840d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 841d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 842d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 843d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 844d6dfbf8fSBarry Smith sum = b[i]; 845d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 846d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 847d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 848d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 849d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 850d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 851d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 852d6dfbf8fSBarry Smith } 853d6dfbf8fSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp, 854d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 855d6dfbf8fSBarry Smith } 856d6dfbf8fSBarry Smith } 857d6dfbf8fSBarry Smith else if ((flag & SOR_LOCAL_SYMMETRIC_SWEEP) == SOR_LOCAL_SYMMETRIC_SWEEP){ 858da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 859da3a660dSBarry Smith return MatRelax(mat->A,bb,omega,flag,shift,its,xx); 860da3a660dSBarry Smith } 861d6dfbf8fSBarry Smith ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx); 862d6dfbf8fSBarry Smith CHKERR(ierr); 863d6dfbf8fSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx); 864d6dfbf8fSBarry Smith CHKERR(ierr); 865d6dfbf8fSBarry Smith while (its--) { 866d6dfbf8fSBarry Smith /* go down through the rows */ 867d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 868d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 869d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 870d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 871d6dfbf8fSBarry Smith sum = b[i]; 872d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 873d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 874d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 875d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 876d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 877d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 878d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 879d6dfbf8fSBarry Smith } 880d6dfbf8fSBarry Smith /* come up through the rows */ 881d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 882d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 883d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 884d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 885d6dfbf8fSBarry Smith sum = b[i]; 886d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 887d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 888d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 889d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 890d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 891d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 892d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 893d6dfbf8fSBarry Smith } 894d6dfbf8fSBarry Smith } 895d6dfbf8fSBarry Smith } 896d6dfbf8fSBarry Smith else if (flag & SOR_LOCAL_FORWARD_SWEEP){ 897da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 898da3a660dSBarry Smith return MatRelax(mat->A,bb,omega,flag,shift,its,xx); 899da3a660dSBarry Smith } 900d6dfbf8fSBarry Smith ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx); 901d6dfbf8fSBarry Smith CHKERR(ierr); 902d6dfbf8fSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx); 903d6dfbf8fSBarry Smith CHKERR(ierr); 904d6dfbf8fSBarry Smith while (its--) { 905d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 906d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 907d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 908d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 909d6dfbf8fSBarry Smith sum = b[i]; 910d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 911d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 912d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 913d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 914d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 915d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 916d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 917d6dfbf8fSBarry Smith } 918d6dfbf8fSBarry Smith } 919d6dfbf8fSBarry Smith } 920d6dfbf8fSBarry Smith else if (flag & SOR_LOCAL_BACKWARD_SWEEP){ 921da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 922da3a660dSBarry Smith return MatRelax(mat->A,bb,omega,flag,shift,its,xx); 923da3a660dSBarry Smith } 924d6dfbf8fSBarry Smith ierr = VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll, 925d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 926d6dfbf8fSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll, 927d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 928d6dfbf8fSBarry Smith while (its--) { 929d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 930d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 931d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 932d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 933d6dfbf8fSBarry Smith sum = b[i]; 934d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 935d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 936d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 937d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 938d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 939d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 940d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 941d6dfbf8fSBarry Smith } 942d6dfbf8fSBarry Smith } 943d6dfbf8fSBarry Smith } 9448a729477SBarry Smith return 0; 9458a729477SBarry Smith } 946a66be287SLois Curfman McInnes 947a66be287SLois Curfman McInnes static int MatGetInfo_MPIAIJ(Mat matin,int flag,int *nz,int *nzalloc,int *mem) 948a66be287SLois Curfman McInnes { 949a66be287SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 950a66be287SLois Curfman McInnes Mat A = mat->A, B = mat->B; 951a66be287SLois Curfman McInnes int ierr, isend[3], irecv[3], nzA, nzallocA, memA; 952a66be287SLois Curfman McInnes 953a66be287SLois Curfman McInnes ierr = MatGetInfo(A,MAT_LOCAL,&nzA,&nzallocA,&memA); CHKERR(ierr); 954a66be287SLois Curfman McInnes ierr = MatGetInfo(B,MAT_LOCAL,&isend[0],&isend[1],&isend[2]); CHKERR(ierr); 955a66be287SLois Curfman McInnes isend[0] += nzA; isend[1] += nzallocA; isend[2] += memA; 956a66be287SLois Curfman McInnes if (flag == MAT_LOCAL) { 957a66be287SLois Curfman McInnes *nz = isend[0]; *nzalloc = isend[1]; *mem = isend[2]; 958a66be287SLois Curfman McInnes } else if (flag == MAT_GLOBAL_MAX) { 959a66be287SLois Curfman McInnes MPI_Allreduce((void *) isend,(void *) irecv,3,MPI_INT,MPI_MAX,matin->comm); 960a66be287SLois Curfman McInnes *nz = irecv[0]; *nzalloc = irecv[1]; *mem = irecv[2]; 961a66be287SLois Curfman McInnes } else if (flag == MAT_GLOBAL_SUM) { 962a66be287SLois Curfman McInnes MPI_Allreduce((void *) isend,(void *) irecv,3,MPI_INT,MPI_SUM,matin->comm); 963a66be287SLois Curfman McInnes *nz = irecv[0]; *nzalloc = irecv[1]; *mem = irecv[2]; 964a66be287SLois Curfman McInnes } 965a66be287SLois Curfman McInnes return 0; 966a66be287SLois Curfman McInnes } 967a66be287SLois Curfman McInnes 968d1710a03SLois Curfman McInnes static int MatSetOption_MPIAIJ(Mat aijin,int op) 969c74985f6SBarry Smith { 97044a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 971c74985f6SBarry Smith 972c74985f6SBarry Smith if (op == NO_NEW_NONZERO_LOCATIONS) { 973c74985f6SBarry Smith MatSetOption(aij->A,op); 974c74985f6SBarry Smith MatSetOption(aij->B,op); 975c74985f6SBarry Smith } 976c74985f6SBarry Smith else if (op == YES_NEW_NONZERO_LOCATIONS) { 977c74985f6SBarry Smith MatSetOption(aij->A,op); 978c74985f6SBarry Smith MatSetOption(aij->B,op); 979c74985f6SBarry Smith } 980c74985f6SBarry Smith else if (op == COLUMN_ORIENTED) SETERR(1,"Column oriented not supported"); 981c74985f6SBarry Smith return 0; 982c74985f6SBarry Smith } 983c74985f6SBarry Smith 984d1710a03SLois Curfman McInnes static int MatGetSize_MPIAIJ(Mat matin,int *m,int *n) 985c74985f6SBarry Smith { 98644a69424SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 987c74985f6SBarry Smith *m = mat->M; *n = mat->N; 988c74985f6SBarry Smith return 0; 989c74985f6SBarry Smith } 990c74985f6SBarry Smith 991d1710a03SLois Curfman McInnes static int MatGetLocalSize_MPIAIJ(Mat matin,int *m,int *n) 992c74985f6SBarry Smith { 99344a69424SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 994c74985f6SBarry Smith *m = mat->m; *n = mat->n; 995c74985f6SBarry Smith return 0; 996c74985f6SBarry Smith } 997c74985f6SBarry Smith 998d1710a03SLois Curfman McInnes static int MatGetOwnershipRange_MPIAIJ(Mat matin,int *m,int *n) 999c74985f6SBarry Smith { 100044a69424SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 1001c74985f6SBarry Smith *m = mat->rstart; *n = mat->rend; 1002c74985f6SBarry Smith return 0; 1003c74985f6SBarry Smith } 1004c74985f6SBarry Smith 100539e00950SLois Curfman McInnes static int MatGetRow_MPIAIJ(Mat matin,int row,int *nz,int **idx,Scalar **v) 100639e00950SLois Curfman McInnes { 1007154123eaSLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 1008154123eaSLois Curfman McInnes Scalar *vworkA, *vworkB, **pvA, **pvB; 1009154123eaSLois Curfman McInnes int i, ierr, *cworkA, *cworkB, **pcA, **pcB, cstart = mat->cstart; 1010154123eaSLois Curfman McInnes int nztot, nzA, nzB, lrow, rstart = mat->rstart, rend = mat->rend; 101139e00950SLois Curfman McInnes 1012154123eaSLois Curfman McInnes if (!mat->assembled) 101339e00950SLois Curfman McInnes SETERR(1,"MatGetRow_MPIAIJ: Must assemble matrix first."); 101439e00950SLois Curfman McInnes if (row < rstart || row >= rend) 1015abc0e9e4SLois Curfman McInnes SETERR(1,"MatGetRow_MPIAIJ: Currently you can get only local rows.") 1016abc0e9e4SLois Curfman McInnes lrow = row - rstart; 101739e00950SLois Curfman McInnes 1018154123eaSLois Curfman McInnes pvA = &vworkA; pcA = &cworkA; pvB = &vworkB; pcB = &cworkB; 1019154123eaSLois Curfman McInnes if (!v) {pvA = 0; pvB = 0;} 1020154123eaSLois Curfman McInnes if (!idx) {pcA = 0; if (!v) pcB = 0;} 1021154123eaSLois Curfman McInnes ierr = MatGetRow(mat->A,lrow,&nzA,pcA,pvA); CHKERR(ierr); 1022154123eaSLois Curfman McInnes ierr = MatGetRow(mat->B,lrow,&nzB,pcB,pvB); CHKERR(ierr); 1023154123eaSLois Curfman McInnes nztot = nzA + nzB; 1024154123eaSLois Curfman McInnes 1025154123eaSLois Curfman McInnes if (v || idx) { 1026154123eaSLois Curfman McInnes if (nztot) { 1027154123eaSLois Curfman McInnes /* Sort by increasing column numbers, assuming A and B already sorted */ 1028154123eaSLois Curfman McInnes int imark, imark2; 1029154123eaSLois Curfman McInnes for (i=0; i<nzB; i++) cworkB[i] = mat->garray[cworkB[i]]; 1030154123eaSLois Curfman McInnes if (v) { 103139e00950SLois Curfman McInnes *v = (Scalar *) MALLOC( (nztot)*sizeof(Scalar) ); CHKPTR(*v); 103239e00950SLois Curfman McInnes for ( i=0; i<nzB; i++ ) { 1033154123eaSLois Curfman McInnes if (cworkB[i] < cstart) (*v)[i] = vworkB[i]; 1034154123eaSLois Curfman McInnes else break; 1035154123eaSLois Curfman McInnes } 1036154123eaSLois Curfman McInnes imark = i; 1037154123eaSLois Curfman McInnes for ( i=0; i<nzA; i++ ) (*v)[imark+i] = vworkA[i]; 1038154123eaSLois Curfman McInnes imark2 = imark+nzA; 1039154123eaSLois Curfman McInnes for ( i=imark; i<nzB; i++ ) (*v)[imark2+i] = vworkB[i]; 1040154123eaSLois Curfman McInnes } 1041154123eaSLois Curfman McInnes if (idx) { 1042154123eaSLois Curfman McInnes *idx = (int *) MALLOC( (nztot)*sizeof(int) ); CHKPTR(*idx); 1043154123eaSLois Curfman McInnes for (i=0; i<nzA; i++) cworkA[i] += cstart; 1044154123eaSLois Curfman McInnes for ( i=0; i<nzB; i++ ) { 1045154123eaSLois Curfman McInnes if (cworkB[i] < cstart) (*idx)[i] = cworkB[i]; 1046154123eaSLois Curfman McInnes else break; 1047154123eaSLois Curfman McInnes } 1048154123eaSLois Curfman McInnes imark = i; 1049154123eaSLois Curfman McInnes for ( i=0; i<nzA; i++ ) (*idx)[imark+i] = cworkA[i]; 1050154123eaSLois Curfman McInnes imark2 = imark+nzA; 1051154123eaSLois Curfman McInnes for ( i=imark; i<nzB; i++ ) (*idx)[imark2+i] = cworkB[i]; 105239e00950SLois Curfman McInnes } 105339e00950SLois Curfman McInnes } 105439e00950SLois Curfman McInnes else {*idx = 0; *v=0;} 1055154123eaSLois Curfman McInnes } 105639e00950SLois Curfman McInnes *nz = nztot; 1057154123eaSLois Curfman McInnes ierr = MatRestoreRow(mat->A,lrow,&nzA,pcA,pvA); CHKERR(ierr); 1058154123eaSLois Curfman McInnes ierr = MatRestoreRow(mat->B,lrow,&nzB,pcB,pvB); CHKERR(ierr); 105939e00950SLois Curfman McInnes return 0; 106039e00950SLois Curfman McInnes } 106139e00950SLois Curfman McInnes 106239e00950SLois Curfman McInnes static int MatRestoreRow_MPIAIJ(Mat mat,int row,int *nz,int **idx,Scalar **v) 106339e00950SLois Curfman McInnes { 1064154123eaSLois Curfman McInnes if (idx) FREE(*idx); 1065154123eaSLois Curfman McInnes if (v) FREE(*v); 106639e00950SLois Curfman McInnes return 0; 106739e00950SLois Curfman McInnes } 106839e00950SLois Curfman McInnes 106944a69424SLois Curfman McInnes static int MatCopy_MPIAIJ(Mat,Mat *); 107044a69424SLois Curfman McInnes extern int MatConvert_MPIAIJ(Mat,MATTYPE,Mat *); 1071d6dfbf8fSBarry Smith 10728a729477SBarry Smith /* -------------------------------------------------------------------*/ 10732ee70a88SLois Curfman McInnes static struct _MatOps MatOps = {MatSetValues_MPIAIJ, 107439e00950SLois Curfman McInnes MatGetRow_MPIAIJ,MatRestoreRow_MPIAIJ, 107544a69424SLois Curfman McInnes MatMult_MPIAIJ,MatMultAdd_MPIAIJ, 107644a69424SLois Curfman McInnes MatMultTrans_MPIAIJ,MatMultTransAdd_MPIAIJ, 10771eb62cbbSBarry Smith 0,0,0,0, 10788a729477SBarry Smith 0,0, 107944a69424SLois Curfman McInnes MatRelax_MPIAIJ, 10808a729477SBarry Smith 0, 1081a66be287SLois Curfman McInnes MatGetInfo_MPIAIJ,0, 108244a69424SLois Curfman McInnes MatCopy_MPIAIJ, 1083d1710a03SLois Curfman McInnes MatGetDiagonal_MPIAIJ,0,0, 108449306af6SLois Curfman McInnes MatBeginAssembly_MPIAIJ,MatEndAssembly_MPIAIJ, 10851eb62cbbSBarry Smith 0, 10862ee70a88SLois Curfman McInnes MatSetOption_MPIAIJ,MatZeroEntries_MPIAIJ,MatZeroRows_MPIAIJ,0, 1087c74985f6SBarry Smith 0,0,0,0, 1088d1710a03SLois Curfman McInnes MatGetSize_MPIAIJ,MatGetLocalSize_MPIAIJ,MatGetOwnershipRange_MPIAIJ, 108977915d1cSLois Curfman McInnes 0,0, 109044a69424SLois Curfman McInnes 0,MatConvert_MPIAIJ }; 10918a729477SBarry Smith 10928a729477SBarry Smith /*@ 10938a729477SBarry Smith 10941eb62cbbSBarry Smith MatCreateMPIAIJ - Creates a sparse parallel matrix 10951eb62cbbSBarry Smith in AIJ format. 10968a729477SBarry Smith 10978a729477SBarry Smith Input Parameters: 10981eb62cbbSBarry Smith . comm - MPI communicator 10991eb62cbbSBarry Smith . m,n - number of local rows and columns (or -1 to have calculated) 11001eb62cbbSBarry Smith . M,N - global rows and columns (or -1 to have calculated) 11011eb62cbbSBarry Smith . d_nz - total number nonzeros in diagonal portion of matrix 11021eb62cbbSBarry Smith . d_nzz - number of nonzeros per row in diagonal portion of matrix or null 11038a729477SBarry Smith . You must leave room for the diagonal entry even if it is zero. 11041eb62cbbSBarry Smith . o_nz - total number nonzeros in off-diagonal portion of matrix 11051eb62cbbSBarry Smith . o_nzz - number of nonzeros per row in off-diagonal portion of matrix 11061eb62cbbSBarry Smith . or null. You must have at least one nonzero per row. 11078a729477SBarry Smith 11088a729477SBarry Smith Output parameters: 11098a729477SBarry Smith . newmat - the matrix 11108a729477SBarry Smith 11111eb62cbbSBarry Smith Keywords: matrix, aij, compressed row, sparse, parallel 11128a729477SBarry Smith @*/ 11131eb62cbbSBarry Smith int MatCreateMPIAIJ(MPI_Comm comm,int m,int n,int M,int N, 11141eb62cbbSBarry Smith int d_nz,int *d_nnz, int o_nz,int *o_nnz,Mat *newmat) 11158a729477SBarry Smith { 11168a729477SBarry Smith Mat mat; 111744a69424SLois Curfman McInnes Mat_MPIAIJ *aij; 11186abc6512SBarry Smith int ierr, i,sum[2],work[2]; 11198a729477SBarry Smith *newmat = 0; 112044a69424SLois Curfman McInnes PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATMPIAIJ,comm); 1121a5a9c739SBarry Smith PLogObjectCreate(mat); 112244a69424SLois Curfman McInnes mat->data = (void *) (aij = NEW(Mat_MPIAIJ)); CHKPTR(aij); 11238a729477SBarry Smith mat->ops = &MatOps; 112444a69424SLois Curfman McInnes mat->destroy = MatDestroy_MPIAIJ; 112544a69424SLois Curfman McInnes mat->view = MatView_MPIAIJ; 11268a729477SBarry Smith mat->factor = 0; 11278a729477SBarry Smith mat->row = 0; 11288a729477SBarry Smith mat->col = 0; 1129d6dfbf8fSBarry Smith 1130d6dfbf8fSBarry Smith mat->comm = comm; 11311eb62cbbSBarry Smith aij->insertmode = NotSetValues; 11321eb62cbbSBarry Smith MPI_Comm_rank(comm,&aij->mytid); 11331eb62cbbSBarry Smith MPI_Comm_size(comm,&aij->numtids); 11341eb62cbbSBarry Smith 11351eb62cbbSBarry Smith if (M == -1 || N == -1) { 11361eb62cbbSBarry Smith work[0] = m; work[1] = n; 1137d6dfbf8fSBarry Smith MPI_Allreduce((void *) work,(void *) sum,2,MPI_INT,MPI_SUM,comm ); 11381eb62cbbSBarry Smith if (M == -1) M = sum[0]; 11391eb62cbbSBarry Smith if (N == -1) N = sum[1]; 11401eb62cbbSBarry Smith } 11411eb62cbbSBarry Smith if (m == -1) {m = M/aij->numtids + ((M % aij->numtids) > aij->mytid);} 11421eb62cbbSBarry Smith if (n == -1) {n = N/aij->numtids + ((N % aij->numtids) > aij->mytid);} 11438a729477SBarry Smith aij->m = m; 11448a729477SBarry Smith aij->n = n; 11451eb62cbbSBarry Smith aij->N = N; 11461eb62cbbSBarry Smith aij->M = M; 11471eb62cbbSBarry Smith 11481eb62cbbSBarry Smith /* build local table of row and column ownerships */ 11491eb62cbbSBarry Smith aij->rowners = (int *) MALLOC(2*(aij->numtids+2)*sizeof(int)); 11501eb62cbbSBarry Smith CHKPTR(aij->rowners); 11511eb62cbbSBarry Smith aij->cowners = aij->rowners + aij->numtids + 1; 11521eb62cbbSBarry Smith MPI_Allgather(&m,1,MPI_INT,aij->rowners+1,1,MPI_INT,comm); 11531eb62cbbSBarry Smith aij->rowners[0] = 0; 11541eb62cbbSBarry Smith for ( i=2; i<=aij->numtids; i++ ) { 11551eb62cbbSBarry Smith aij->rowners[i] += aij->rowners[i-1]; 11568a729477SBarry Smith } 11571eb62cbbSBarry Smith aij->rstart = aij->rowners[aij->mytid]; 11581eb62cbbSBarry Smith aij->rend = aij->rowners[aij->mytid+1]; 11591eb62cbbSBarry Smith MPI_Allgather(&n,1,MPI_INT,aij->cowners+1,1,MPI_INT,comm); 11601eb62cbbSBarry Smith aij->cowners[0] = 0; 11611eb62cbbSBarry Smith for ( i=2; i<=aij->numtids; i++ ) { 11621eb62cbbSBarry Smith aij->cowners[i] += aij->cowners[i-1]; 11638a729477SBarry Smith } 11641eb62cbbSBarry Smith aij->cstart = aij->cowners[aij->mytid]; 11651eb62cbbSBarry Smith aij->cend = aij->cowners[aij->mytid+1]; 11668a729477SBarry Smith 11678a729477SBarry Smith 1168*6b5873e3SBarry Smith ierr = MatCreateSequentialAIJ(MPI_COMM_SELF,m,n,d_nz,d_nnz,&aij->A); 1169*6b5873e3SBarry Smith CHKERR(ierr); 1170a5a9c739SBarry Smith PLogObjectParent(mat,aij->A); 1171*6b5873e3SBarry Smith ierr = MatCreateSequentialAIJ(MPI_COMM_SELF,m,N,o_nz,o_nnz,&aij->B); 1172*6b5873e3SBarry Smith CHKERR(ierr); 1173a5a9c739SBarry Smith PLogObjectParent(mat,aij->B); 11748a729477SBarry Smith 11751eb62cbbSBarry Smith /* build cache for off array entries formed */ 11761eb62cbbSBarry Smith aij->stash.nmax = CHUNCKSIZE; /* completely arbratray number */ 11771eb62cbbSBarry Smith aij->stash.n = 0; 11781eb62cbbSBarry Smith aij->stash.array = (Scalar *) MALLOC( aij->stash.nmax*(2*sizeof(int) + 11791eb62cbbSBarry Smith sizeof(Scalar))); CHKPTR(aij->stash.array); 11801eb62cbbSBarry Smith aij->stash.idx = (int *) (aij->stash.array + aij->stash.nmax); 11811eb62cbbSBarry Smith aij->stash.idy = (int *) (aij->stash.idx + aij->stash.nmax); 11829e25ed09SBarry Smith aij->colmap = 0; 11839e25ed09SBarry Smith aij->garray = 0; 11848a729477SBarry Smith 11851eb62cbbSBarry Smith /* stuff used for matrix vector multiply */ 11861eb62cbbSBarry Smith aij->lvec = 0; 11871eb62cbbSBarry Smith aij->Mvctx = 0; 1188d6dfbf8fSBarry Smith aij->assembled = 0; 11898a729477SBarry Smith 1190d6dfbf8fSBarry Smith *newmat = mat; 1191d6dfbf8fSBarry Smith return 0; 1192d6dfbf8fSBarry Smith } 1193c74985f6SBarry Smith 119444a69424SLois Curfman McInnes static int MatCopy_MPIAIJ(Mat matin,Mat *newmat) 1195d6dfbf8fSBarry Smith { 1196d6dfbf8fSBarry Smith Mat mat; 119744a69424SLois Curfman McInnes Mat_MPIAIJ *aij,*oldmat = (Mat_MPIAIJ *) matin->data; 11982ee70a88SLois Curfman McInnes int ierr, len; 1199d6dfbf8fSBarry Smith *newmat = 0; 1200d6dfbf8fSBarry Smith 1201d6dfbf8fSBarry Smith if (!oldmat->assembled) SETERR(1,"Cannot copy unassembled matrix"); 120244a69424SLois Curfman McInnes PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATMPIAIJ,matin->comm); 1203a5a9c739SBarry Smith PLogObjectCreate(mat); 120444a69424SLois Curfman McInnes mat->data = (void *) (aij = NEW(Mat_MPIAIJ)); CHKPTR(aij); 1205d6dfbf8fSBarry Smith mat->ops = &MatOps; 120644a69424SLois Curfman McInnes mat->destroy = MatDestroy_MPIAIJ; 120744a69424SLois Curfman McInnes mat->view = MatView_MPIAIJ; 1208d6dfbf8fSBarry Smith mat->factor = matin->factor; 1209d6dfbf8fSBarry Smith mat->row = 0; 1210d6dfbf8fSBarry Smith mat->col = 0; 1211d6dfbf8fSBarry Smith 1212d6dfbf8fSBarry Smith aij->m = oldmat->m; 1213d6dfbf8fSBarry Smith aij->n = oldmat->n; 1214d6dfbf8fSBarry Smith aij->M = oldmat->M; 1215d6dfbf8fSBarry Smith aij->N = oldmat->N; 1216d6dfbf8fSBarry Smith 1217d6dfbf8fSBarry Smith aij->assembled = 1; 1218d6dfbf8fSBarry Smith aij->rstart = oldmat->rstart; 1219d6dfbf8fSBarry Smith aij->rend = oldmat->rend; 1220d6dfbf8fSBarry Smith aij->cstart = oldmat->cstart; 1221d6dfbf8fSBarry Smith aij->cend = oldmat->cend; 1222d6dfbf8fSBarry Smith aij->numtids = oldmat->numtids; 1223d6dfbf8fSBarry Smith aij->mytid = oldmat->mytid; 1224d6dfbf8fSBarry Smith aij->insertmode = NotSetValues; 1225d6dfbf8fSBarry Smith 1226d6dfbf8fSBarry Smith aij->rowners = (int *) MALLOC( (aij->numtids+1)*sizeof(int) ); 1227d6dfbf8fSBarry Smith CHKPTR(aij->rowners); 1228d6dfbf8fSBarry Smith MEMCPY(aij->rowners,oldmat->rowners,(aij->numtids+1)*sizeof(int)); 1229d6dfbf8fSBarry Smith aij->stash.nmax = 0; 1230d6dfbf8fSBarry Smith aij->stash.n = 0; 1231d6dfbf8fSBarry Smith aij->stash.array = 0; 12322ee70a88SLois Curfman McInnes if (oldmat->colmap) { 12332ee70a88SLois Curfman McInnes aij->colmap = (int *) MALLOC( (aij->N)*sizeof(int) ); 12342ee70a88SLois Curfman McInnes CHKPTR(aij->colmap); 12352ee70a88SLois Curfman McInnes MEMCPY(aij->colmap,oldmat->colmap,(aij->N)*sizeof(int)); 12362ee70a88SLois Curfman McInnes } else aij->colmap = 0; 12372ee70a88SLois Curfman McInnes if (oldmat->garray && (len = ((Mat_AIJ *) (oldmat->B->data))->n)) { 12382ee70a88SLois Curfman McInnes aij->garray = (int *) MALLOC(len*sizeof(int) ); CHKPTR(aij->garray); 12392ee70a88SLois Curfman McInnes MEMCPY(aij->garray,oldmat->garray,len*sizeof(int)); 12402ee70a88SLois Curfman McInnes } else aij->garray = 0; 1241d6dfbf8fSBarry Smith mat->comm = matin->comm; 1242d6dfbf8fSBarry Smith 1243d6dfbf8fSBarry Smith ierr = VecCreate(oldmat->lvec,&aij->lvec); CHKERR(ierr); 1244a5a9c739SBarry Smith PLogObjectParent(mat,aij->lvec); 1245d6dfbf8fSBarry Smith ierr = VecScatterCtxCopy(oldmat->Mvctx,&aij->Mvctx); CHKERR(ierr); 1246a5a9c739SBarry Smith PLogObjectParent(mat,aij->Mvctx); 1247d6dfbf8fSBarry Smith ierr = MatCopy(oldmat->A,&aij->A); CHKERR(ierr); 1248a5a9c739SBarry Smith PLogObjectParent(mat,aij->A); 1249d6dfbf8fSBarry Smith ierr = MatCopy(oldmat->B,&aij->B); CHKERR(ierr); 1250a5a9c739SBarry Smith PLogObjectParent(mat,aij->B); 12518a729477SBarry Smith *newmat = mat; 12528a729477SBarry Smith return 0; 12538a729477SBarry Smith } 1254