1cb512458SBarry Smith #ifndef lint 2*9d00d63dSBarry Smith static char vcid[] = "$Id: mpiaij.c,v 1.37 1995/05/03 01:03:31 curfman Exp bsmith $"; 3cb512458SBarry Smith #endif 48a729477SBarry Smith 51eb62cbbSBarry Smith #include "mpiaij.h" 68a729477SBarry Smith #include "vec/vecimpl.h" 7d6dfbf8fSBarry Smith #include "inline/spops.h" 88a729477SBarry Smith 91eb62cbbSBarry Smith #define CHUNCKSIZE 100 101eb62cbbSBarry Smith /* 111eb62cbbSBarry Smith This is a simple minded stash. Do a linear search to determine if 121eb62cbbSBarry Smith in stash, if not add to end. 131eb62cbbSBarry Smith */ 141eb62cbbSBarry Smith static int StashValues(Stash *stash,int row,int n, int *idxn, 151eb62cbbSBarry Smith Scalar *values,InsertMode addv) 168a729477SBarry Smith { 171eb62cbbSBarry Smith int i,j,N = stash->n,found,*n_idx, *n_idy; 181eb62cbbSBarry Smith Scalar val,*n_array; 198a729477SBarry Smith 201eb62cbbSBarry Smith for ( i=0; i<n; i++ ) { 211eb62cbbSBarry Smith found = 0; 221eb62cbbSBarry Smith val = *values++; 238a729477SBarry Smith for ( j=0; j<N; j++ ) { 241eb62cbbSBarry Smith if ( stash->idx[j] == row && stash->idy[j] == idxn[i]) { 251eb62cbbSBarry Smith /* found a match */ 26*9d00d63dSBarry Smith if (addv == ADDVALUES) stash->array[j] += val; 271eb62cbbSBarry Smith else stash->array[j] = val; 281eb62cbbSBarry Smith found = 1; 298a729477SBarry Smith break; 308a729477SBarry Smith } 318a729477SBarry Smith } 321eb62cbbSBarry Smith if (!found) { /* not found so add to end */ 331eb62cbbSBarry Smith if ( stash->n == stash->nmax ) { 341eb62cbbSBarry Smith /* allocate a larger stash */ 351eb62cbbSBarry Smith n_array = (Scalar *) MALLOC( (stash->nmax + CHUNCKSIZE)*( 361eb62cbbSBarry Smith 2*sizeof(int) + sizeof(Scalar))); 371eb62cbbSBarry Smith CHKPTR(n_array); 381eb62cbbSBarry Smith n_idx = (int *) (n_array + stash->nmax + CHUNCKSIZE); 391eb62cbbSBarry Smith n_idy = (int *) (n_idx + stash->nmax + CHUNCKSIZE); 401eb62cbbSBarry Smith MEMCPY(n_array,stash->array,stash->nmax*sizeof(Scalar)); 411eb62cbbSBarry Smith MEMCPY(n_idx,stash->idx,stash->nmax*sizeof(int)); 421eb62cbbSBarry Smith MEMCPY(n_idy,stash->idy,stash->nmax*sizeof(int)); 431eb62cbbSBarry Smith if (stash->array) FREE(stash->array); 441eb62cbbSBarry Smith stash->array = n_array; stash->idx = n_idx; stash->idy = n_idy; 451eb62cbbSBarry Smith stash->nmax += CHUNCKSIZE; 461eb62cbbSBarry Smith } 471eb62cbbSBarry Smith stash->array[stash->n] = val; 481eb62cbbSBarry Smith stash->idx[stash->n] = row; 491eb62cbbSBarry Smith stash->idy[stash->n++] = idxn[i]; 501eb62cbbSBarry Smith } 518a729477SBarry Smith } 528a729477SBarry Smith return 0; 538a729477SBarry Smith } 548a729477SBarry Smith 559e25ed09SBarry Smith /* local utility routine that creates a mapping from the global column 569e25ed09SBarry Smith number to the local number in the off-diagonal part of the local 579e25ed09SBarry Smith storage of the matrix. This is done in a non scable way since the 589e25ed09SBarry Smith length of colmap equals the global matrix length. 599e25ed09SBarry Smith */ 609e25ed09SBarry Smith static int CreateColmap(Mat mat) 619e25ed09SBarry Smith { 6244a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 6344a69424SLois Curfman McInnes Mat_AIJ *B = (Mat_AIJ*) aij->B->data; 649e25ed09SBarry Smith int n = B->n,i; 659e25ed09SBarry Smith aij->colmap = (int *) MALLOC( aij->N*sizeof(int) ); CHKPTR(aij->colmap); 669e25ed09SBarry Smith MEMSET(aij->colmap,0,aij->N*sizeof(int)); 67abc0e9e4SLois Curfman McInnes for ( i=0; i<n; i++ ) aij->colmap[aij->garray[i]] = i+1; 689e25ed09SBarry Smith return 0; 699e25ed09SBarry Smith } 709e25ed09SBarry Smith 712ee70a88SLois Curfman McInnes static int MatSetValues_MPIAIJ(Mat mat,int m,int *idxm,int n, 721eb62cbbSBarry Smith int *idxn,Scalar *v,InsertMode addv) 738a729477SBarry Smith { 7444a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 751eb62cbbSBarry Smith int ierr,i,j, rstart = aij->rstart, rend = aij->rend; 761eb62cbbSBarry Smith int cstart = aij->cstart, cend = aij->cend,row,col; 778a729477SBarry Smith 7807a0e7adSLois Curfman McInnes if (aij->insertmode != NOTSETVALUES && aij->insertmode != addv) { 791eb62cbbSBarry Smith SETERR(1,"You cannot mix inserts and adds"); 808a729477SBarry Smith } 811eb62cbbSBarry Smith aij->insertmode = addv; 828a729477SBarry Smith for ( i=0; i<m; i++ ) { 83da3a660dSBarry Smith if (idxm[i] < 0) SETERR(1,"Negative row index"); 84da3a660dSBarry Smith if (idxm[i] >= aij->M) SETERR(1,"Row index too large"); 851eb62cbbSBarry Smith if (idxm[i] >= rstart && idxm[i] < rend) { 861eb62cbbSBarry Smith row = idxm[i] - rstart; 871eb62cbbSBarry Smith for ( j=0; j<n; j++ ) { 88da3a660dSBarry Smith if (idxn[j] < 0) SETERR(1,"Negative column index"); 89da3a660dSBarry Smith if (idxn[j] >= aij->N) SETERR(1,"Column index too large"); 901eb62cbbSBarry Smith if (idxn[j] >= cstart && idxn[j] < cend){ 911eb62cbbSBarry Smith col = idxn[j] - cstart; 921eb62cbbSBarry Smith ierr = MatSetValues(aij->A,1,&row,1,&col,v+i*n+j,addv);CHKERR(ierr); 931eb62cbbSBarry Smith } 941eb62cbbSBarry Smith else { 95d6dfbf8fSBarry Smith if (aij->assembled) { 969e25ed09SBarry Smith if (!aij->colmap) {ierr = CreateColmap(mat); CHKERR(ierr);} 979e25ed09SBarry Smith col = aij->colmap[idxn[j]] - 1; 989e25ed09SBarry Smith if (col < 0) { 999e25ed09SBarry Smith SETERR(1,"Cannot insert new off diagonal block nonzero in\ 1009e25ed09SBarry Smith already\ 101d6dfbf8fSBarry Smith assembled matrix. Contact petsc-maint@mcs.anl.gov\ 102d6dfbf8fSBarry Smith if your need this feature"); 103d6dfbf8fSBarry Smith } 1049e25ed09SBarry Smith } 1059e25ed09SBarry Smith else col = idxn[j]; 1061eb62cbbSBarry Smith ierr = MatSetValues(aij->B,1,&row,1,&col,v+i*n+j,addv);CHKERR(ierr); 1071eb62cbbSBarry Smith } 1081eb62cbbSBarry Smith } 1091eb62cbbSBarry Smith } 1101eb62cbbSBarry Smith else { 1111eb62cbbSBarry Smith ierr = StashValues(&aij->stash,idxm[i],n,idxn,v+i*n,addv);CHKERR(ierr); 1121eb62cbbSBarry Smith } 1138a729477SBarry Smith } 1148a729477SBarry Smith return 0; 1158a729477SBarry Smith } 1168a729477SBarry Smith 1178a729477SBarry Smith /* 1181eb62cbbSBarry Smith the assembly code is alot like the code for vectors, we should 1191eb62cbbSBarry Smith sometime derive a single assembly code that can be used for 1201eb62cbbSBarry Smith either case. 1218a729477SBarry Smith */ 1228a729477SBarry Smith 123fc76ce87SLois Curfman McInnes static int MatAssemblyBegin_MPIAIJ(Mat mat,MatAssemblyType mode) 1248a729477SBarry Smith { 12544a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 126d6dfbf8fSBarry Smith MPI_Comm comm = mat->comm; 1276abc6512SBarry Smith int numtids = aij->numtids, *owners = aij->rowners; 1281eb62cbbSBarry Smith int mytid = aij->mytid; 1291eb62cbbSBarry Smith MPI_Request *send_waits,*recv_waits; 1306abc6512SBarry Smith int *nprocs,i,j,idx,*procs,nsends,nreceives,nmax,*work; 1311eb62cbbSBarry Smith int tag = 50, *owner,*starts,count; 1321eb62cbbSBarry Smith InsertMode addv; 1331eb62cbbSBarry Smith Scalar *rvalues,*svalues; 1341eb62cbbSBarry Smith 1351eb62cbbSBarry Smith /* make sure all processors are either in INSERTMODE or ADDMODE */ 13628988994SBarry Smith MPI_Allreduce((void *) &aij->insertmode,(void *) &addv,1,MPI_INT, 1371eb62cbbSBarry Smith MPI_BOR,comm); 138*9d00d63dSBarry Smith if (addv == (ADDVALUES|INSERTVALUES)) { 1391eb62cbbSBarry Smith SETERR(1,"Some processors have inserted while others have added"); 1401eb62cbbSBarry Smith } 1411eb62cbbSBarry Smith aij->insertmode = addv; /* in case this processor had no cache */ 1421eb62cbbSBarry Smith 1431eb62cbbSBarry Smith /* first count number of contributors to each processor */ 1441eb62cbbSBarry Smith nprocs = (int *) MALLOC( 2*numtids*sizeof(int) ); CHKPTR(nprocs); 1451eb62cbbSBarry Smith MEMSET(nprocs,0,2*numtids*sizeof(int)); procs = nprocs + numtids; 1461eb62cbbSBarry Smith owner = (int *) MALLOC( (aij->stash.n+1)*sizeof(int) ); CHKPTR(owner); 1471eb62cbbSBarry Smith for ( i=0; i<aij->stash.n; i++ ) { 1481eb62cbbSBarry Smith idx = aij->stash.idx[i]; 1491eb62cbbSBarry Smith for ( j=0; j<numtids; j++ ) { 1501eb62cbbSBarry Smith if (idx >= owners[j] && idx < owners[j+1]) { 1511eb62cbbSBarry Smith nprocs[j]++; procs[j] = 1; owner[i] = j; break; 1528a729477SBarry Smith } 1538a729477SBarry Smith } 1548a729477SBarry Smith } 1551eb62cbbSBarry Smith nsends = 0; for ( i=0; i<numtids; i++ ) { nsends += procs[i];} 1561eb62cbbSBarry Smith 1571eb62cbbSBarry Smith /* inform other processors of number of messages and max length*/ 1581eb62cbbSBarry Smith work = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(work); 1591eb62cbbSBarry Smith MPI_Allreduce((void *) procs,(void *) work,numtids,MPI_INT,MPI_SUM,comm); 1601eb62cbbSBarry Smith nreceives = work[mytid]; 1611eb62cbbSBarry Smith MPI_Allreduce((void *) nprocs,(void *) work,numtids,MPI_INT,MPI_MAX,comm); 1621eb62cbbSBarry Smith nmax = work[mytid]; 1631eb62cbbSBarry Smith FREE(work); 1641eb62cbbSBarry Smith 1651eb62cbbSBarry Smith /* post receives: 1661eb62cbbSBarry Smith 1) each message will consist of ordered pairs 1671eb62cbbSBarry Smith (global index,value) we store the global index as a double 168d6dfbf8fSBarry Smith to simplify the message passing. 1691eb62cbbSBarry Smith 2) since we don't know how long each individual message is we 1701eb62cbbSBarry Smith allocate the largest needed buffer for each receive. Potentially 1711eb62cbbSBarry Smith this is a lot of wasted space. 1721eb62cbbSBarry Smith 1731eb62cbbSBarry Smith 1741eb62cbbSBarry Smith This could be done better. 1751eb62cbbSBarry Smith */ 17628988994SBarry Smith rvalues = (Scalar *) MALLOC(3*(nreceives+1)*(nmax+1)*sizeof(Scalar)); 1771eb62cbbSBarry Smith CHKPTR(rvalues); 1781eb62cbbSBarry Smith recv_waits = (MPI_Request *) MALLOC((nreceives+1)*sizeof(MPI_Request)); 1791eb62cbbSBarry Smith CHKPTR(recv_waits); 1801eb62cbbSBarry Smith for ( i=0; i<nreceives; i++ ) { 1811eb62cbbSBarry Smith MPI_Irecv((void *)(rvalues+3*nmax*i),3*nmax,MPI_SCALAR,MPI_ANY_SOURCE,tag, 1821eb62cbbSBarry Smith comm,recv_waits+i); 1831eb62cbbSBarry Smith } 1841eb62cbbSBarry Smith 1851eb62cbbSBarry Smith /* do sends: 1861eb62cbbSBarry Smith 1) starts[i] gives the starting index in svalues for stuff going to 1871eb62cbbSBarry Smith the ith processor 1881eb62cbbSBarry Smith */ 1891eb62cbbSBarry Smith svalues = (Scalar *) MALLOC( 3*(aij->stash.n+1)*sizeof(Scalar) ); 1901eb62cbbSBarry Smith CHKPTR(svalues); 1911eb62cbbSBarry Smith send_waits = (MPI_Request *) MALLOC( (nsends+1)*sizeof(MPI_Request)); 1921eb62cbbSBarry Smith CHKPTR(send_waits); 1931eb62cbbSBarry Smith starts = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(starts); 1941eb62cbbSBarry Smith starts[0] = 0; 1951eb62cbbSBarry Smith for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 1961eb62cbbSBarry Smith for ( i=0; i<aij->stash.n; i++ ) { 1971eb62cbbSBarry Smith svalues[3*starts[owner[i]]] = (Scalar) aij->stash.idx[i]; 1981eb62cbbSBarry Smith svalues[3*starts[owner[i]]+1] = (Scalar) aij->stash.idy[i]; 1991eb62cbbSBarry Smith svalues[3*(starts[owner[i]]++)+2] = aij->stash.array[i]; 2001eb62cbbSBarry Smith } 2011eb62cbbSBarry Smith FREE(owner); 2021eb62cbbSBarry Smith starts[0] = 0; 2031eb62cbbSBarry Smith for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 2041eb62cbbSBarry Smith count = 0; 2051eb62cbbSBarry Smith for ( i=0; i<numtids; i++ ) { 2061eb62cbbSBarry Smith if (procs[i]) { 2071eb62cbbSBarry Smith MPI_Isend((void*)(svalues+3*starts[i]),3*nprocs[i],MPI_SCALAR,i,tag, 2081eb62cbbSBarry Smith comm,send_waits+count++); 2091eb62cbbSBarry Smith } 2101eb62cbbSBarry Smith } 2111eb62cbbSBarry Smith FREE(starts); FREE(nprocs); 2121eb62cbbSBarry Smith 2131eb62cbbSBarry Smith /* Free cache space */ 2141eb62cbbSBarry Smith aij->stash.nmax = aij->stash.n = 0; 2151eb62cbbSBarry Smith if (aij->stash.array){ FREE(aij->stash.array); aij->stash.array = 0;} 2161eb62cbbSBarry Smith 2171eb62cbbSBarry Smith aij->svalues = svalues; aij->rvalues = rvalues; 2181eb62cbbSBarry Smith aij->nsends = nsends; aij->nrecvs = nreceives; 2191eb62cbbSBarry Smith aij->send_waits = send_waits; aij->recv_waits = recv_waits; 2201eb62cbbSBarry Smith aij->rmax = nmax; 2211eb62cbbSBarry Smith 2221eb62cbbSBarry Smith return 0; 2231eb62cbbSBarry Smith } 22444a69424SLois Curfman McInnes extern int MatSetUpMultiply_MPIAIJ(Mat); 2251eb62cbbSBarry Smith 226fc76ce87SLois Curfman McInnes static int MatAssemblyEnd_MPIAIJ(Mat mat,MatAssemblyType mode) 2271eb62cbbSBarry Smith { 2281eb62cbbSBarry Smith int ierr; 22944a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 2301eb62cbbSBarry Smith 2311eb62cbbSBarry Smith MPI_Status *send_status,recv_status; 2326abc6512SBarry Smith int imdex,nrecvs = aij->nrecvs, count = nrecvs, i, n; 2331eb62cbbSBarry Smith int row,col; 2341eb62cbbSBarry Smith Scalar *values,val; 2351eb62cbbSBarry Smith InsertMode addv = aij->insertmode; 2361eb62cbbSBarry Smith 2371eb62cbbSBarry Smith /* wait on receives */ 2381eb62cbbSBarry Smith while (count) { 239d6dfbf8fSBarry Smith MPI_Waitany(nrecvs,aij->recv_waits,&imdex,&recv_status); 2401eb62cbbSBarry Smith /* unpack receives into our local space */ 241d6dfbf8fSBarry Smith values = aij->rvalues + 3*imdex*aij->rmax; 2421eb62cbbSBarry Smith MPI_Get_count(&recv_status,MPI_SCALAR,&n); 2431eb62cbbSBarry Smith n = n/3; 2441eb62cbbSBarry Smith for ( i=0; i<n; i++ ) { 2451eb62cbbSBarry Smith row = (int) PETSCREAL(values[3*i]) - aij->rstart; 2461eb62cbbSBarry Smith col = (int) PETSCREAL(values[3*i+1]); 2471eb62cbbSBarry Smith val = values[3*i+2]; 2481eb62cbbSBarry Smith if (col >= aij->cstart && col < aij->cend) { 2491eb62cbbSBarry Smith col -= aij->cstart; 2501eb62cbbSBarry Smith MatSetValues(aij->A,1,&row,1,&col,&val,addv); 2511eb62cbbSBarry Smith } 2521eb62cbbSBarry Smith else { 253d6dfbf8fSBarry Smith if (aij->assembled) { 2549e25ed09SBarry Smith if (!aij->colmap) {ierr = CreateColmap(mat); CHKERR(ierr);} 2559e25ed09SBarry Smith col = aij->colmap[col] - 1; 2569e25ed09SBarry Smith if (col < 0) { 2579e25ed09SBarry Smith SETERR(1,"Cannot insert new off diagonal block nonzero in\ 2589e25ed09SBarry Smith already\ 259d6dfbf8fSBarry Smith assembled matrix. Contact petsc-maint@mcs.anl.gov\ 260d6dfbf8fSBarry Smith if your need this feature"); 261d6dfbf8fSBarry Smith } 2629e25ed09SBarry Smith } 2631eb62cbbSBarry Smith MatSetValues(aij->B,1,&row,1,&col,&val,addv); 2641eb62cbbSBarry Smith } 2651eb62cbbSBarry Smith } 2661eb62cbbSBarry Smith count--; 2671eb62cbbSBarry Smith } 2681eb62cbbSBarry Smith FREE(aij->recv_waits); FREE(aij->rvalues); 2691eb62cbbSBarry Smith 2701eb62cbbSBarry Smith /* wait on sends */ 2711eb62cbbSBarry Smith if (aij->nsends) { 2721eb62cbbSBarry Smith send_status = (MPI_Status *) MALLOC( aij->nsends*sizeof(MPI_Status) ); 2731eb62cbbSBarry Smith CHKPTR(send_status); 2741eb62cbbSBarry Smith MPI_Waitall(aij->nsends,aij->send_waits,send_status); 2751eb62cbbSBarry Smith FREE(send_status); 2761eb62cbbSBarry Smith } 2771eb62cbbSBarry Smith FREE(aij->send_waits); FREE(aij->svalues); 2781eb62cbbSBarry Smith 27907a0e7adSLois Curfman McInnes aij->insertmode = NOTSETVALUES; 280ee50ffe9SBarry Smith ierr = MatAssemblyBegin(aij->A,mode); CHKERR(ierr); 281ee50ffe9SBarry Smith ierr = MatAssemblyEnd(aij->A,mode); CHKERR(ierr); 2821eb62cbbSBarry Smith 2835e42470aSBarry Smith if (!aij->assembled && mode == FINAL_ASSEMBLY) { 284d3c9fed9SLois Curfman McInnes ierr = MatSetUpMultiply_MPIAIJ(mat); CHKERR(ierr); 285d6dfbf8fSBarry Smith aij->assembled = 1; 2865e42470aSBarry Smith } 287ee50ffe9SBarry Smith ierr = MatAssemblyBegin(aij->B,mode); CHKERR(ierr); 288ee50ffe9SBarry Smith ierr = MatAssemblyEnd(aij->B,mode); CHKERR(ierr); 2895e42470aSBarry Smith 2908a729477SBarry Smith return 0; 2918a729477SBarry Smith } 2928a729477SBarry Smith 2932ee70a88SLois Curfman McInnes static int MatZeroEntries_MPIAIJ(Mat A) 2941eb62cbbSBarry Smith { 29544a69424SLois Curfman McInnes Mat_MPIAIJ *l = (Mat_MPIAIJ *) A->data; 2961eb62cbbSBarry Smith 2971eb62cbbSBarry Smith MatZeroEntries(l->A); MatZeroEntries(l->B); 2981eb62cbbSBarry Smith return 0; 2991eb62cbbSBarry Smith } 3001eb62cbbSBarry Smith 3011eb62cbbSBarry Smith /* again this uses the same basic stratagy as in the assembly and 3021eb62cbbSBarry Smith scatter create routines, we should try to do it systemamatically 3031eb62cbbSBarry Smith if we can figure out the proper level of generality. */ 3041eb62cbbSBarry Smith 3051eb62cbbSBarry Smith /* the code does not do the diagonal entries correctly unless the 3061eb62cbbSBarry Smith matrix is square and the column and row owerships are identical. 3071eb62cbbSBarry Smith This is a BUG. The only way to fix it seems to be to access 3081eb62cbbSBarry Smith aij->A and aij->B directly and not through the MatZeroRows() 3091eb62cbbSBarry Smith routine. 3101eb62cbbSBarry Smith */ 31144a69424SLois Curfman McInnes static int MatZeroRows_MPIAIJ(Mat A,IS is,Scalar *diag) 3121eb62cbbSBarry Smith { 31344a69424SLois Curfman McInnes Mat_MPIAIJ *l = (Mat_MPIAIJ *) A->data; 3141eb62cbbSBarry Smith int i,ierr,N, *rows,*owners = l->rowners,numtids = l->numtids; 3156abc6512SBarry Smith int *procs,*nprocs,j,found,idx,nsends,*work; 3161eb62cbbSBarry Smith int nmax,*svalues,*starts,*owner,nrecvs,mytid = l->mytid; 3176abc6512SBarry Smith int *rvalues,tag = 67,count,base,slen,n,*source; 318d6dfbf8fSBarry Smith int *lens,imdex,*lrows,*values; 319d6dfbf8fSBarry Smith MPI_Comm comm = A->comm; 3201eb62cbbSBarry Smith MPI_Request *send_waits,*recv_waits; 3211eb62cbbSBarry Smith MPI_Status recv_status,*send_status; 3221eb62cbbSBarry Smith IS istmp; 3231eb62cbbSBarry Smith 32444a69424SLois Curfman McInnes if (!l->assembled) SETERR(1,"MatZeroRows_MPIAIJ: must assemble matrix first"); 3251eb62cbbSBarry Smith ierr = ISGetLocalSize(is,&N); CHKERR(ierr); 3261eb62cbbSBarry Smith ierr = ISGetIndices(is,&rows); CHKERR(ierr); 3271eb62cbbSBarry Smith 3281eb62cbbSBarry Smith /* first count number of contributors to each processor */ 3291eb62cbbSBarry Smith nprocs = (int *) MALLOC( 2*numtids*sizeof(int) ); CHKPTR(nprocs); 3301eb62cbbSBarry Smith MEMSET(nprocs,0,2*numtids*sizeof(int)); procs = nprocs + numtids; 3311eb62cbbSBarry Smith owner = (int *) MALLOC((N+1)*sizeof(int)); CHKPTR(owner); /* see note*/ 3321eb62cbbSBarry Smith for ( i=0; i<N; i++ ) { 3331eb62cbbSBarry Smith idx = rows[i]; 3341eb62cbbSBarry Smith found = 0; 3351eb62cbbSBarry Smith for ( j=0; j<numtids; j++ ) { 3361eb62cbbSBarry Smith if (idx >= owners[j] && idx < owners[j+1]) { 3371eb62cbbSBarry Smith nprocs[j]++; procs[j] = 1; owner[i] = j; found = 1; break; 3381eb62cbbSBarry Smith } 3391eb62cbbSBarry Smith } 340d6dfbf8fSBarry Smith if (!found) SETERR(1,"Imdex out of range"); 3411eb62cbbSBarry Smith } 3421eb62cbbSBarry Smith nsends = 0; for ( i=0; i<numtids; i++ ) { nsends += procs[i];} 3431eb62cbbSBarry Smith 3441eb62cbbSBarry Smith /* inform other processors of number of messages and max length*/ 3451eb62cbbSBarry Smith work = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(work); 3461eb62cbbSBarry Smith MPI_Allreduce((void *) procs,(void *) work,numtids,MPI_INT,MPI_SUM,comm); 3471eb62cbbSBarry Smith nrecvs = work[mytid]; 3481eb62cbbSBarry Smith MPI_Allreduce((void *) nprocs,(void *) work,numtids,MPI_INT,MPI_MAX,comm); 3491eb62cbbSBarry Smith nmax = work[mytid]; 3501eb62cbbSBarry Smith FREE(work); 3511eb62cbbSBarry Smith 3521eb62cbbSBarry Smith /* post receives: */ 35328988994SBarry Smith rvalues = (int *) MALLOC((nrecvs+1)*(nmax+1)*sizeof(int)); /*see note */ 3541eb62cbbSBarry Smith CHKPTR(rvalues); 3551eb62cbbSBarry Smith recv_waits = (MPI_Request *) MALLOC((nrecvs+1)*sizeof(MPI_Request)); 3561eb62cbbSBarry Smith CHKPTR(recv_waits); 3571eb62cbbSBarry Smith for ( i=0; i<nrecvs; i++ ) { 3581eb62cbbSBarry Smith MPI_Irecv((void *)(rvalues+nmax*i),nmax,MPI_INT,MPI_ANY_SOURCE,tag, 3591eb62cbbSBarry Smith comm,recv_waits+i); 3601eb62cbbSBarry Smith } 3611eb62cbbSBarry Smith 3621eb62cbbSBarry Smith /* do sends: 3631eb62cbbSBarry Smith 1) starts[i] gives the starting index in svalues for stuff going to 3641eb62cbbSBarry Smith the ith processor 3651eb62cbbSBarry Smith */ 3661eb62cbbSBarry Smith svalues = (int *) MALLOC( (N+1)*sizeof(int) ); CHKPTR(svalues); 3671eb62cbbSBarry Smith send_waits = (MPI_Request *) MALLOC( (nsends+1)*sizeof(MPI_Request)); 3681eb62cbbSBarry Smith CHKPTR(send_waits); 3691eb62cbbSBarry Smith starts = (int *) MALLOC( (numtids+1)*sizeof(int) ); CHKPTR(starts); 3701eb62cbbSBarry Smith starts[0] = 0; 3711eb62cbbSBarry Smith for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 3721eb62cbbSBarry Smith for ( i=0; i<N; i++ ) { 3731eb62cbbSBarry Smith svalues[starts[owner[i]]++] = rows[i]; 3741eb62cbbSBarry Smith } 3751eb62cbbSBarry Smith ISRestoreIndices(is,&rows); 3761eb62cbbSBarry Smith 3771eb62cbbSBarry Smith starts[0] = 0; 3781eb62cbbSBarry Smith for ( i=1; i<numtids+1; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 3791eb62cbbSBarry Smith count = 0; 3801eb62cbbSBarry Smith for ( i=0; i<numtids; i++ ) { 3811eb62cbbSBarry Smith if (procs[i]) { 3821eb62cbbSBarry Smith MPI_Isend((void*)(svalues+starts[i]),nprocs[i],MPI_INT,i,tag, 3831eb62cbbSBarry Smith comm,send_waits+count++); 3841eb62cbbSBarry Smith } 3851eb62cbbSBarry Smith } 3861eb62cbbSBarry Smith FREE(starts); 3871eb62cbbSBarry Smith 3881eb62cbbSBarry Smith base = owners[mytid]; 3891eb62cbbSBarry Smith 3901eb62cbbSBarry Smith /* wait on receives */ 3911eb62cbbSBarry Smith lens = (int *) MALLOC( 2*(nrecvs+1)*sizeof(int) ); CHKPTR(lens); 3921eb62cbbSBarry Smith source = lens + nrecvs; 3931eb62cbbSBarry Smith count = nrecvs; slen = 0; 3941eb62cbbSBarry Smith while (count) { 395d6dfbf8fSBarry Smith MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status); 3961eb62cbbSBarry Smith /* unpack receives into our local space */ 3971eb62cbbSBarry Smith MPI_Get_count(&recv_status,MPI_INT,&n); 398d6dfbf8fSBarry Smith source[imdex] = recv_status.MPI_SOURCE; 399d6dfbf8fSBarry Smith lens[imdex] = n; 4001eb62cbbSBarry Smith slen += n; 4011eb62cbbSBarry Smith count--; 4021eb62cbbSBarry Smith } 4031eb62cbbSBarry Smith FREE(recv_waits); 4041eb62cbbSBarry Smith 4051eb62cbbSBarry Smith /* move the data into the send scatter */ 4061eb62cbbSBarry Smith lrows = (int *) MALLOC( slen*sizeof(int) ); CHKPTR(lrows); 4071eb62cbbSBarry Smith count = 0; 4081eb62cbbSBarry Smith for ( i=0; i<nrecvs; i++ ) { 4091eb62cbbSBarry Smith values = rvalues + i*nmax; 4101eb62cbbSBarry Smith for ( j=0; j<lens[i]; j++ ) { 4111eb62cbbSBarry Smith lrows[count++] = values[j] - base; 4121eb62cbbSBarry Smith } 4131eb62cbbSBarry Smith } 4141eb62cbbSBarry Smith FREE(rvalues); FREE(lens); 4151eb62cbbSBarry Smith FREE(owner); FREE(nprocs); 4161eb62cbbSBarry Smith 4171eb62cbbSBarry Smith /* actually zap the local rows */ 4186b5873e3SBarry Smith ierr = ISCreateSequential(MPI_COMM_SELF,slen,lrows,&istmp); 4196b5873e3SBarry Smith CHKERR(ierr); FREE(lrows); 4201eb62cbbSBarry Smith ierr = MatZeroRows(l->A,istmp,diag); CHKERR(ierr); 4211eb62cbbSBarry Smith ierr = MatZeroRows(l->B,istmp,0); CHKERR(ierr); 4221eb62cbbSBarry Smith ierr = ISDestroy(istmp); CHKERR(ierr); 4231eb62cbbSBarry Smith 4241eb62cbbSBarry Smith /* wait on sends */ 4251eb62cbbSBarry Smith if (nsends) { 4261eb62cbbSBarry Smith send_status = (MPI_Status *) MALLOC( nsends*sizeof(MPI_Status) ); 4271eb62cbbSBarry Smith CHKPTR(send_status); 4281eb62cbbSBarry Smith MPI_Waitall(nsends,send_waits,send_status); 4291eb62cbbSBarry Smith FREE(send_status); 4301eb62cbbSBarry Smith } 4311eb62cbbSBarry Smith FREE(send_waits); FREE(svalues); 4321eb62cbbSBarry Smith 4331eb62cbbSBarry Smith 4341eb62cbbSBarry Smith return 0; 4351eb62cbbSBarry Smith } 4361eb62cbbSBarry Smith 43744a69424SLois Curfman McInnes static int MatMult_MPIAIJ(Mat aijin,Vec xx,Vec yy) 4381eb62cbbSBarry Smith { 43944a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 4401eb62cbbSBarry Smith int ierr; 44144a69424SLois Curfman McInnes if (!aij->assembled) SETERR(1,"MatMult_MPIAIJ: must assemble matrix first"); 442*9d00d63dSBarry Smith ierr = VecScatterBegin(xx,0,aij->lvec,0,INSERTVALUES,SCATTERALL,aij->Mvctx); 4431eb62cbbSBarry Smith CHKERR(ierr); 4441eb62cbbSBarry Smith ierr = MatMult(aij->A,xx,yy); CHKERR(ierr); 445*9d00d63dSBarry Smith ierr = VecScatterEnd(xx,0,aij->lvec,0,INSERTVALUES,SCATTERALL,aij->Mvctx); 446d6dfbf8fSBarry Smith CHKERR(ierr); 4471eb62cbbSBarry Smith ierr = MatMultAdd(aij->B,aij->lvec,yy,yy); CHKERR(ierr); 4481eb62cbbSBarry Smith return 0; 4491eb62cbbSBarry Smith } 4501eb62cbbSBarry Smith 45144a69424SLois Curfman McInnes static int MatMultAdd_MPIAIJ(Mat aijin,Vec xx,Vec yy,Vec zz) 452da3a660dSBarry Smith { 45344a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 454da3a660dSBarry Smith int ierr; 45544a69424SLois Curfman McInnes if (!aij->assembled) SETERR(1,"MatMult_MPIAIJ: must assemble matrix first"); 456*9d00d63dSBarry Smith ierr = VecScatterBegin(xx,0,aij->lvec,0,INSERTVALUES,SCATTERALL,aij->Mvctx); 457da3a660dSBarry Smith CHKERR(ierr); 458da3a660dSBarry Smith ierr = MatMultAdd(aij->A,xx,yy,zz); CHKERR(ierr); 459*9d00d63dSBarry Smith ierr = VecScatterEnd(xx,0,aij->lvec,0,INSERTVALUES,SCATTERALL,aij->Mvctx); 460da3a660dSBarry Smith CHKERR(ierr); 461da3a660dSBarry Smith ierr = MatMultAdd(aij->B,aij->lvec,zz,zz); CHKERR(ierr); 462da3a660dSBarry Smith return 0; 463da3a660dSBarry Smith } 464da3a660dSBarry Smith 46544a69424SLois Curfman McInnes static int MatMultTrans_MPIAIJ(Mat aijin,Vec xx,Vec yy) 466da3a660dSBarry Smith { 46744a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 468da3a660dSBarry Smith int ierr; 469da3a660dSBarry Smith 47044a69424SLois Curfman McInnes if (!aij->assembled) 47144a69424SLois Curfman McInnes SETERR(1,"MatMulTrans_MPIAIJ: must assemble matrix first"); 472da3a660dSBarry Smith /* do nondiagonal part */ 473da3a660dSBarry Smith ierr = MatMultTrans(aij->B,xx,aij->lvec); CHKERR(ierr); 474da3a660dSBarry Smith /* send it on its way */ 475*9d00d63dSBarry Smith ierr = VecScatterBegin(aij->lvec,0,yy,0,ADDVALUES, 476*9d00d63dSBarry Smith SCATTERALL|SCATTERREVERSE,aij->Mvctx); CHKERR(ierr); 477da3a660dSBarry Smith /* do local part */ 478da3a660dSBarry Smith ierr = MatMultTrans(aij->A,xx,yy); CHKERR(ierr); 479da3a660dSBarry Smith /* receive remote parts: note this assumes the values are not actually */ 480da3a660dSBarry Smith /* inserted in yy until the next line, which is true for my implementation*/ 481da3a660dSBarry Smith /* but is not perhaps always true. */ 482*9d00d63dSBarry Smith ierr = VecScatterEnd(aij->lvec,0,yy,0,ADDVALUES,SCATTERALL|SCATTERREVERSE, 483da3a660dSBarry Smith aij->Mvctx); CHKERR(ierr); 484da3a660dSBarry Smith return 0; 485da3a660dSBarry Smith } 486da3a660dSBarry Smith 48744a69424SLois Curfman McInnes static int MatMultTransAdd_MPIAIJ(Mat aijin,Vec xx,Vec yy,Vec zz) 488da3a660dSBarry Smith { 48944a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 490da3a660dSBarry Smith int ierr; 491da3a660dSBarry Smith 49244a69424SLois Curfman McInnes if (!aij->assembled) 49344a69424SLois Curfman McInnes SETERR(1,"MatMulTransAdd_MPIAIJ: must assemble matrix first"); 494da3a660dSBarry Smith /* do nondiagonal part */ 495da3a660dSBarry Smith ierr = MatMultTrans(aij->B,xx,aij->lvec); CHKERR(ierr); 496da3a660dSBarry Smith /* send it on its way */ 497*9d00d63dSBarry Smith ierr = VecScatterBegin(aij->lvec,0,zz,0,ADDVALUES, 498*9d00d63dSBarry Smith SCATTERALL|SCATTERREVERSE,aij->Mvctx); CHKERR(ierr); 499da3a660dSBarry Smith /* do local part */ 500da3a660dSBarry Smith ierr = MatMultTransAdd(aij->A,xx,yy,zz); CHKERR(ierr); 501da3a660dSBarry Smith /* receive remote parts: note this assumes the values are not actually */ 502da3a660dSBarry Smith /* inserted in yy until the next line, which is true for my implementation*/ 503da3a660dSBarry Smith /* but is not perhaps always true. */ 504*9d00d63dSBarry Smith ierr = VecScatterEnd(aij->lvec,0,zz,0,ADDVALUES,SCATTERALL|SCATTERREVERSE, 505da3a660dSBarry Smith aij->Mvctx); CHKERR(ierr); 506da3a660dSBarry Smith return 0; 507da3a660dSBarry Smith } 508da3a660dSBarry Smith 5091eb62cbbSBarry Smith /* 5101eb62cbbSBarry Smith This only works correctly for square matrices where the subblock A->A is the 5111eb62cbbSBarry Smith diagonal block 5121eb62cbbSBarry Smith */ 513d1710a03SLois Curfman McInnes static int MatGetDiagonal_MPIAIJ(Mat Ain,Vec v) 5141eb62cbbSBarry Smith { 51544a69424SLois Curfman McInnes Mat_MPIAIJ *A = (Mat_MPIAIJ *) Ain->data; 51644a69424SLois Curfman McInnes if (!A->assembled) SETERR(1,"MatGetDiag_MPIAIJ: must assemble matrix first"); 5171eb62cbbSBarry Smith return MatGetDiagonal(A->A,v); 5181eb62cbbSBarry Smith } 5191eb62cbbSBarry Smith 52044a69424SLois Curfman McInnes static int MatDestroy_MPIAIJ(PetscObject obj) 5211eb62cbbSBarry Smith { 5221eb62cbbSBarry Smith Mat mat = (Mat) obj; 52344a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 5241eb62cbbSBarry Smith int ierr; 525a5a9c739SBarry Smith #if defined(PETSC_LOG) 526a5a9c739SBarry Smith PLogObjectState(obj,"Rows %d Cols %d",aij->M,aij->N); 527a5a9c739SBarry Smith #endif 5281eb62cbbSBarry Smith FREE(aij->rowners); 5291eb62cbbSBarry Smith ierr = MatDestroy(aij->A); CHKERR(ierr); 5301eb62cbbSBarry Smith ierr = MatDestroy(aij->B); CHKERR(ierr); 5319e25ed09SBarry Smith if (aij->colmap) FREE(aij->colmap); 5329e25ed09SBarry Smith if (aij->garray) FREE(aij->garray); 5331eb62cbbSBarry Smith if (aij->lvec) VecDestroy(aij->lvec); 5341eb62cbbSBarry Smith if (aij->Mvctx) VecScatterCtxDestroy(aij->Mvctx); 535a5a9c739SBarry Smith FREE(aij); 536a5a9c739SBarry Smith PLogObjectDestroy(mat); 537a5a9c739SBarry Smith PETSCHEADERDESTROY(mat); 5381eb62cbbSBarry Smith return 0; 5391eb62cbbSBarry Smith } 5407857610eSBarry Smith #include "draw.h" 541ee50ffe9SBarry Smith #include "pviewer.h" 542ee50ffe9SBarry Smith 54344a69424SLois Curfman McInnes static int MatView_MPIAIJ(PetscObject obj,Viewer viewer) 5441eb62cbbSBarry Smith { 5451eb62cbbSBarry Smith Mat mat = (Mat) obj; 54644a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data; 5471eb62cbbSBarry Smith int ierr; 548d13ab20cSBarry Smith PetscObject vobj = (PetscObject) viewer; 5491eb62cbbSBarry Smith 550ab254492SBarry Smith if (!aij->assembled) SETERR(1,"MatView_MPIAIJ: must assemble matrix first"); 551154123eaSLois Curfman McInnes if (!viewer) { /* so that viewers may be used from debuggers */ 552154123eaSLois Curfman McInnes viewer = STDOUT_VIEWER; vobj = (PetscObject) viewer; 553154123eaSLois Curfman McInnes } 554ab254492SBarry Smith if (vobj->cookie == DRAW_COOKIE && vobj->type == NULLWINDOW) return 0; 5557857610eSBarry Smith if (vobj->cookie == VIEWER_COOKIE && vobj->type == FILE_VIEWER) { 5564a0ce102SLois Curfman McInnes FILE *fd = ViewerFileGetPointer_Private(viewer); 557d6dfbf8fSBarry Smith MPE_Seq_begin(mat->comm,1); 558d13ab20cSBarry Smith fprintf(fd,"[%d] rows %d starts %d ends %d cols %d starts %d ends %d\n", 5591eb62cbbSBarry Smith aij->mytid,aij->m,aij->rstart,aij->rend,aij->n,aij->cstart, 5601eb62cbbSBarry Smith aij->cend); 561da69df5fSBarry Smith ierr = MatView(aij->A,viewer); CHKERR(ierr); 562da69df5fSBarry Smith ierr = MatView(aij->B,viewer); CHKERR(ierr); 563d13ab20cSBarry Smith fflush(fd); 564d6dfbf8fSBarry Smith MPE_Seq_end(mat->comm,1); 565d13ab20cSBarry Smith } 5667857610eSBarry Smith else if ((vobj->cookie == VIEWER_COOKIE && vobj->type == FILES_VIEWER) || 5677857610eSBarry Smith vobj->cookie == DRAW_COOKIE) { 56895373324SBarry Smith int numtids = aij->numtids, mytid = aij->mytid; 56995373324SBarry Smith if (numtids == 1) { 57095373324SBarry Smith ierr = MatView(aij->A,viewer); CHKERR(ierr); 57195373324SBarry Smith } 57295373324SBarry Smith else { 57395373324SBarry Smith /* assemble the entire matrix onto first processor. */ 57495373324SBarry Smith Mat A; 5752ee70a88SLois Curfman McInnes Mat_AIJ *Aloc; 5762eb8c8abSBarry Smith int M = aij->M, N = aij->N,m,*ai,*aj,row,*cols,i,*ct; 57795373324SBarry Smith Scalar *a; 5782ee70a88SLois Curfman McInnes 57995373324SBarry Smith if (!mytid) { 58095373324SBarry Smith ierr = MatCreateMPIAIJ(mat->comm,M,N,M,N,0,0,0,0,&A); 58195373324SBarry Smith } 58295373324SBarry Smith else { 58395373324SBarry Smith ierr = MatCreateMPIAIJ(mat->comm,0,0,M,N,0,0,0,0,&A); 58495373324SBarry Smith } 58595373324SBarry Smith CHKERR(ierr); 58695373324SBarry Smith 58795373324SBarry Smith /* copy over the A part */ 5882ee70a88SLois Curfman McInnes Aloc = (Mat_AIJ*) aij->A->data; 5892ee70a88SLois Curfman McInnes m = Aloc->m; ai = Aloc->i; aj = Aloc->j; a = Aloc->a; 59095373324SBarry Smith row = aij->rstart; 59195373324SBarry Smith for ( i=0; i<ai[m]; i++ ) {aj[i] += aij->cstart - 1;} 59295373324SBarry Smith for ( i=0; i<m; i++ ) { 59307a0e7adSLois Curfman McInnes ierr = MatSetValues(A,1,&row,ai[i+1]-ai[i],aj,a,INSERTVALUES); 59495373324SBarry Smith CHKERR(ierr); 59595373324SBarry Smith row++; a += ai[i+1]-ai[i]; aj += ai[i+1]-ai[i]; 59695373324SBarry Smith } 5972ee70a88SLois Curfman McInnes aj = Aloc->j; 59895373324SBarry Smith for ( i=0; i<ai[m]; i++ ) {aj[i] -= aij->cstart - 1;} 59995373324SBarry Smith 60095373324SBarry Smith /* copy over the B part */ 6012ee70a88SLois Curfman McInnes Aloc = (Mat_AIJ*) aij->B->data; 6022ee70a88SLois Curfman McInnes m = Aloc->m; ai = Aloc->i; aj = Aloc->j; a = Aloc->a; 60395373324SBarry Smith row = aij->rstart; 60495373324SBarry Smith ct = cols = (int *) MALLOC( (ai[m]+1)*sizeof(int) ); CHKPTR(cols); 60595373324SBarry Smith for ( i=0; i<ai[m]; i++ ) {cols[i] = aij->garray[aj[i]-1];} 60695373324SBarry Smith for ( i=0; i<m; i++ ) { 60707a0e7adSLois Curfman McInnes ierr = MatSetValues(A,1,&row,ai[i+1]-ai[i],cols,a,INSERTVALUES); 60895373324SBarry Smith CHKERR(ierr); 60995373324SBarry Smith row++; a += ai[i+1]-ai[i]; cols += ai[i+1]-ai[i]; 61095373324SBarry Smith } 61195373324SBarry Smith FREE(ct); 612ee50ffe9SBarry Smith ierr = MatAssemblyBegin(A,FINAL_ASSEMBLY); CHKERR(ierr); 613ee50ffe9SBarry Smith ierr = MatAssemblyEnd(A,FINAL_ASSEMBLY); CHKERR(ierr); 61495373324SBarry Smith if (!mytid) { 61595373324SBarry Smith ierr = MatView(((Mat_MPIAIJ*)(A->data))->A,viewer); CHKERR(ierr); 61695373324SBarry Smith } 61795373324SBarry Smith ierr = MatDestroy(A); CHKERR(ierr); 61895373324SBarry Smith } 61995373324SBarry Smith } 6201eb62cbbSBarry Smith return 0; 6211eb62cbbSBarry Smith } 6221eb62cbbSBarry Smith 623d3c9fed9SLois Curfman McInnes extern int MatMarkDiag_AIJ(Mat_AIJ *); 6241eb62cbbSBarry Smith /* 6251eb62cbbSBarry Smith This has to provide several versions. 6261eb62cbbSBarry Smith 6271eb62cbbSBarry Smith 1) per sequential 6281eb62cbbSBarry Smith 2) a) use only local smoothing updating outer values only once. 6291eb62cbbSBarry Smith b) local smoothing updating outer values each inner iteration 630d6dfbf8fSBarry Smith 3) color updating out values betwen colors. 6311eb62cbbSBarry Smith */ 632fc76ce87SLois Curfman McInnes static int MatRelax_MPIAIJ(Mat matin,Vec bb,double omega,MatSORType flag, 633fc76ce87SLois Curfman McInnes double shift,int its,Vec xx) 6348a729477SBarry Smith { 63544a69424SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 636d6dfbf8fSBarry Smith Mat AA = mat->A, BB = mat->B; 63744a69424SLois Curfman McInnes Mat_AIJ *A = (Mat_AIJ *) AA->data, *B = (Mat_AIJ *)BB->data; 6386abc6512SBarry Smith Scalar zero = 0.0,*b,*x,*xs,*ls,d,*v,sum,scale,*t,*ts; 6396abc6512SBarry Smith int ierr,*idx, *diag; 6406abc6512SBarry Smith int n = mat->n, m = mat->m, i; 641da3a660dSBarry Smith Vec tt; 6428a729477SBarry Smith 64344a69424SLois Curfman McInnes if (!mat->assembled) SETERR(1,"MatRelax_MPIAIJ: must assemble matrix first"); 6441eb62cbbSBarry Smith 645d6dfbf8fSBarry Smith VecGetArray(xx,&x); VecGetArray(bb,&b); VecGetArray(mat->lvec,&ls); 646d6dfbf8fSBarry Smith xs = x -1; /* shift by one for index start of 1 */ 647da3a660dSBarry Smith ls--; 648d3c9fed9SLois Curfman McInnes if (!A->diag) {if ((ierr = MatMarkDiag_AIJ(A))) return ierr;} 649d6dfbf8fSBarry Smith diag = A->diag; 650acb40c82SBarry Smith if (flag == SOR_APPLY_UPPER || flag == SOR_APPLY_LOWER) { 651acb40c82SBarry Smith SETERR(1,"That option not yet support for parallel AIJ matrices"); 652acb40c82SBarry Smith } 653da3a660dSBarry Smith if (flag & SOR_EISENSTAT) { 654da3a660dSBarry Smith /* Let A = L + U + D; where L is lower trianglar, 655da3a660dSBarry Smith U is upper triangular, E is diagonal; This routine applies 656da3a660dSBarry Smith 657da3a660dSBarry Smith (L + E)^{-1} A (U + E)^{-1} 658da3a660dSBarry Smith 659da3a660dSBarry Smith to a vector efficiently using Eisenstat's trick. This is for 660da3a660dSBarry Smith the case of SSOR preconditioner, so E is D/omega where omega 661da3a660dSBarry Smith is the relaxation factor. 662da3a660dSBarry Smith */ 663da3a660dSBarry Smith ierr = VecCreate(xx,&tt); CHKERR(ierr); 664da3a660dSBarry Smith VecGetArray(tt,&t); 665da3a660dSBarry Smith scale = (2.0/omega) - 1.0; 666da3a660dSBarry Smith /* x = (E + U)^{-1} b */ 667da3a660dSBarry Smith VecSet(&zero,mat->lvec); 668*9d00d63dSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,INSERTVALUES,PIPELINEUP, 669da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 670da3a660dSBarry Smith for ( i=m-1; i>-1; i-- ) { 671da3a660dSBarry Smith n = A->i[i+1] - diag[i] - 1; 672da3a660dSBarry Smith idx = A->j + diag[i]; 673da3a660dSBarry Smith v = A->a + diag[i]; 674da3a660dSBarry Smith sum = b[i]; 675da3a660dSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 676da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 677da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 678da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 679da3a660dSBarry Smith v = B->a + B->i[i] - 1; 680da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 681da3a660dSBarry Smith x[i] = omega*(sum/d); 682da3a660dSBarry Smith } 683*9d00d63dSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,INSERTVALUES,PIPELINEUP, 684da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 685da3a660dSBarry Smith 686da3a660dSBarry Smith /* t = b - (2*E - D)x */ 687da3a660dSBarry Smith v = A->a; 688da3a660dSBarry Smith for ( i=0; i<m; i++ ) { t[i] = b[i] - scale*(v[*diag++ - 1])*x[i]; } 689da3a660dSBarry Smith 690da3a660dSBarry Smith /* t = (E + L)^{-1}t */ 691da3a660dSBarry Smith ts = t - 1; /* shifted by one for index start of a or mat->j*/ 692da3a660dSBarry Smith diag = A->diag; 693da3a660dSBarry Smith VecSet(&zero,mat->lvec); 694*9d00d63dSBarry Smith ierr = VecPipelineBegin(tt,0,mat->lvec,0,INSERTVALUES,PIPELINEDOWN, 695da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 696da3a660dSBarry Smith for ( i=0; i<m; i++ ) { 697da3a660dSBarry Smith n = diag[i] - A->i[i]; 698da3a660dSBarry Smith idx = A->j + A->i[i] - 1; 699da3a660dSBarry Smith v = A->a + A->i[i] - 1; 700da3a660dSBarry Smith sum = t[i]; 701da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ts,v,idx,n); 702da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 703da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 704da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 705da3a660dSBarry Smith v = B->a + B->i[i] - 1; 706da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 707da3a660dSBarry Smith t[i] = omega*(sum/d); 708da3a660dSBarry Smith } 709*9d00d63dSBarry Smith ierr = VecPipelineEnd(tt,0,mat->lvec,0,INSERTVALUES,PIPELINEDOWN, 710da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 711da3a660dSBarry Smith /* x = x + t */ 712da3a660dSBarry Smith for ( i=0; i<m; i++ ) { x[i] += t[i]; } 713da3a660dSBarry Smith VecDestroy(tt); 714da3a660dSBarry Smith return 0; 715da3a660dSBarry Smith } 716da3a660dSBarry Smith 7171eb62cbbSBarry Smith 718d6dfbf8fSBarry Smith if ((flag & SOR_SYMMETRIC_SWEEP) == SOR_SYMMETRIC_SWEEP){ 719da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 720da3a660dSBarry Smith VecSet(&zero,mat->lvec); VecSet(&zero,xx); 721da3a660dSBarry Smith } 722da3a660dSBarry Smith else { 723*9d00d63dSBarry Smith ierr=VecScatterBegin(xx,0,mat->lvec,0,INSERTVALUES,SCATTERUP,mat->Mvctx); 724d6dfbf8fSBarry Smith CHKERR(ierr); 725*9d00d63dSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,INSERTVALUES,SCATTERUP,mat->Mvctx); 726d6dfbf8fSBarry Smith CHKERR(ierr); 727da3a660dSBarry Smith } 728d6dfbf8fSBarry Smith while (its--) { 729d6dfbf8fSBarry Smith /* go down through the rows */ 730*9d00d63dSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,INSERTVALUES,PIPELINEDOWN, 731d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 732d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 733d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 734d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 735d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 736d6dfbf8fSBarry Smith sum = b[i]; 737d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 738d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 739d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 740d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 741d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 742d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 743d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 744d6dfbf8fSBarry Smith } 745*9d00d63dSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,INSERTVALUES,PIPELINEDOWN, 746d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 747d6dfbf8fSBarry Smith /* come up through the rows */ 748*9d00d63dSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,INSERTVALUES,PIPELINEUP, 749d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 750d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 751d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 752d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 753d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 754d6dfbf8fSBarry Smith sum = b[i]; 755d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 756d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 757d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 758d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 759d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 760d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 761d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 762d6dfbf8fSBarry Smith } 763*9d00d63dSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,INSERTVALUES,PIPELINEUP, 764d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 765d6dfbf8fSBarry Smith } 766d6dfbf8fSBarry Smith } 767d6dfbf8fSBarry Smith else if (flag & SOR_FORWARD_SWEEP){ 768da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 769da3a660dSBarry Smith VecSet(&zero,mat->lvec); 770*9d00d63dSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,INSERTVALUES,PIPELINEDOWN, 771da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 772da3a660dSBarry Smith for ( i=0; i<m; i++ ) { 773da3a660dSBarry Smith n = diag[i] - A->i[i]; 774da3a660dSBarry Smith idx = A->j + A->i[i] - 1; 775da3a660dSBarry Smith v = A->a + A->i[i] - 1; 776da3a660dSBarry Smith sum = b[i]; 777da3a660dSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 778da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 779da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 780da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 781da3a660dSBarry Smith v = B->a + B->i[i] - 1; 782da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 783da3a660dSBarry Smith x[i] = omega*(sum/d); 784da3a660dSBarry Smith } 785*9d00d63dSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,INSERTVALUES,PIPELINEDOWN, 786da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 787da3a660dSBarry Smith its--; 788da3a660dSBarry Smith } 789d6dfbf8fSBarry Smith while (its--) { 790*9d00d63dSBarry Smith ierr=VecScatterBegin(xx,0,mat->lvec,0,INSERTVALUES,SCATTERUP,mat->Mvctx); 791d6dfbf8fSBarry Smith CHKERR(ierr); 792*9d00d63dSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,INSERTVALUES,SCATTERUP,mat->Mvctx); 793d6dfbf8fSBarry Smith CHKERR(ierr); 794*9d00d63dSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,INSERTVALUES,PIPELINEDOWN, 795d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 796d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 797d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 798d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 799d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 800d6dfbf8fSBarry Smith sum = b[i]; 801d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 802d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 803d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 804d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 805d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 806d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 807d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 808d6dfbf8fSBarry Smith } 809*9d00d63dSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,INSERTVALUES,PIPELINEDOWN, 810d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 811d6dfbf8fSBarry Smith } 812d6dfbf8fSBarry Smith } 813d6dfbf8fSBarry Smith else if (flag & SOR_BACKWARD_SWEEP){ 814da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 815da3a660dSBarry Smith VecSet(&zero,mat->lvec); 816*9d00d63dSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,INSERTVALUES,PIPELINEUP, 817da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 818da3a660dSBarry Smith for ( i=m-1; i>-1; i-- ) { 819da3a660dSBarry Smith n = A->i[i+1] - diag[i] - 1; 820da3a660dSBarry Smith idx = A->j + diag[i]; 821da3a660dSBarry Smith v = A->a + diag[i]; 822da3a660dSBarry Smith sum = b[i]; 823da3a660dSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 824da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 825da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 826da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 827da3a660dSBarry Smith v = B->a + B->i[i] - 1; 828da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 829da3a660dSBarry Smith x[i] = omega*(sum/d); 830da3a660dSBarry Smith } 831*9d00d63dSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,INSERTVALUES,PIPELINEUP, 832da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 833da3a660dSBarry Smith its--; 834da3a660dSBarry Smith } 835d6dfbf8fSBarry Smith while (its--) { 836*9d00d63dSBarry Smith ierr = VecScatterBegin(xx,0,mat->lvec,0,INSERTVALUES,SCATTERDOWN, 837d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 838*9d00d63dSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,INSERTVALUES,SCATTERDOWN, 839d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 840*9d00d63dSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,INSERTVALUES,PIPELINEUP, 841d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 842d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 843d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 844d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 845d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 846d6dfbf8fSBarry Smith sum = b[i]; 847d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 848d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 849d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 850d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 851d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 852d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 853d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 854d6dfbf8fSBarry Smith } 855*9d00d63dSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,INSERTVALUES,PIPELINEUP, 856d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 857d6dfbf8fSBarry Smith } 858d6dfbf8fSBarry Smith } 859d6dfbf8fSBarry Smith else if ((flag & SOR_LOCAL_SYMMETRIC_SWEEP) == SOR_LOCAL_SYMMETRIC_SWEEP){ 860da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 861da3a660dSBarry Smith return MatRelax(mat->A,bb,omega,flag,shift,its,xx); 862da3a660dSBarry Smith } 863*9d00d63dSBarry Smith ierr=VecScatterBegin(xx,0,mat->lvec,0,INSERTVALUES,SCATTERALL,mat->Mvctx); 864d6dfbf8fSBarry Smith CHKERR(ierr); 865*9d00d63dSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,INSERTVALUES,SCATTERALL,mat->Mvctx); 866d6dfbf8fSBarry Smith CHKERR(ierr); 867d6dfbf8fSBarry Smith while (its--) { 868d6dfbf8fSBarry Smith /* go down through the rows */ 869d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 870d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 871d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 872d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 873d6dfbf8fSBarry Smith sum = b[i]; 874d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 875d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 876d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 877d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 878d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 879d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 880d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 881d6dfbf8fSBarry Smith } 882d6dfbf8fSBarry Smith /* come up through the rows */ 883d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 884d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 885d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 886d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 887d6dfbf8fSBarry Smith sum = b[i]; 888d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 889d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 890d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 891d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 892d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 893d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 894d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 895d6dfbf8fSBarry Smith } 896d6dfbf8fSBarry Smith } 897d6dfbf8fSBarry Smith } 898d6dfbf8fSBarry Smith else if (flag & SOR_LOCAL_FORWARD_SWEEP){ 899da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 900da3a660dSBarry Smith return MatRelax(mat->A,bb,omega,flag,shift,its,xx); 901da3a660dSBarry Smith } 902*9d00d63dSBarry Smith ierr=VecScatterBegin(xx,0,mat->lvec,0,INSERTVALUES,SCATTERALL,mat->Mvctx); 903d6dfbf8fSBarry Smith CHKERR(ierr); 904*9d00d63dSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,INSERTVALUES,SCATTERALL,mat->Mvctx); 905d6dfbf8fSBarry Smith CHKERR(ierr); 906d6dfbf8fSBarry Smith while (its--) { 907d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 908d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 909d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 910d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 911d6dfbf8fSBarry Smith sum = b[i]; 912d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 913d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 914d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 915d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 916d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 917d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 918d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 919d6dfbf8fSBarry Smith } 920d6dfbf8fSBarry Smith } 921d6dfbf8fSBarry Smith } 922d6dfbf8fSBarry Smith else if (flag & SOR_LOCAL_BACKWARD_SWEEP){ 923da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 924da3a660dSBarry Smith return MatRelax(mat->A,bb,omega,flag,shift,its,xx); 925da3a660dSBarry Smith } 926*9d00d63dSBarry Smith ierr = VecScatterBegin(xx,0,mat->lvec,0,INSERTVALUES,SCATTERALL, 927d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 928*9d00d63dSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,INSERTVALUES,SCATTERALL, 929d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 930d6dfbf8fSBarry Smith while (its--) { 931d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 932d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 933d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 934d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 935d6dfbf8fSBarry Smith sum = b[i]; 936d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 937d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 938d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 939d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 940d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 941d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 942d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 943d6dfbf8fSBarry Smith } 944d6dfbf8fSBarry Smith } 945d6dfbf8fSBarry Smith } 9468a729477SBarry Smith return 0; 9478a729477SBarry Smith } 948a66be287SLois Curfman McInnes 949fc76ce87SLois Curfman McInnes static int MatGetInfo_MPIAIJ(Mat matin,MatInfoType flag,int *nz, 950fc76ce87SLois Curfman McInnes int *nzalloc,int *mem) 951a66be287SLois Curfman McInnes { 952a66be287SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 953a66be287SLois Curfman McInnes Mat A = mat->A, B = mat->B; 954a66be287SLois Curfman McInnes int ierr, isend[3], irecv[3], nzA, nzallocA, memA; 955a66be287SLois Curfman McInnes 956a66be287SLois Curfman McInnes ierr = MatGetInfo(A,MAT_LOCAL,&nzA,&nzallocA,&memA); CHKERR(ierr); 957a66be287SLois Curfman McInnes ierr = MatGetInfo(B,MAT_LOCAL,&isend[0],&isend[1],&isend[2]); CHKERR(ierr); 958a66be287SLois Curfman McInnes isend[0] += nzA; isend[1] += nzallocA; isend[2] += memA; 959a66be287SLois Curfman McInnes if (flag == MAT_LOCAL) { 960a66be287SLois Curfman McInnes *nz = isend[0]; *nzalloc = isend[1]; *mem = isend[2]; 961a66be287SLois Curfman McInnes } else if (flag == MAT_GLOBAL_MAX) { 962a66be287SLois Curfman McInnes MPI_Allreduce((void *) isend,(void *) irecv,3,MPI_INT,MPI_MAX,matin->comm); 963a66be287SLois Curfman McInnes *nz = irecv[0]; *nzalloc = irecv[1]; *mem = irecv[2]; 964a66be287SLois Curfman McInnes } else if (flag == MAT_GLOBAL_SUM) { 965a66be287SLois Curfman McInnes MPI_Allreduce((void *) isend,(void *) irecv,3,MPI_INT,MPI_SUM,matin->comm); 966a66be287SLois Curfman McInnes *nz = irecv[0]; *nzalloc = irecv[1]; *mem = irecv[2]; 967a66be287SLois Curfman McInnes } 968a66be287SLois Curfman McInnes return 0; 969a66be287SLois Curfman McInnes } 970a66be287SLois Curfman McInnes 971fc76ce87SLois Curfman McInnes static int MatSetOption_MPIAIJ(Mat aijin,MatOption op) 972c74985f6SBarry Smith { 97344a69424SLois Curfman McInnes Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data; 974c74985f6SBarry Smith 975c74985f6SBarry Smith if (op == NO_NEW_NONZERO_LOCATIONS) { 976c74985f6SBarry Smith MatSetOption(aij->A,op); 977c74985f6SBarry Smith MatSetOption(aij->B,op); 978c74985f6SBarry Smith } 979c74985f6SBarry Smith else if (op == YES_NEW_NONZERO_LOCATIONS) { 980c74985f6SBarry Smith MatSetOption(aij->A,op); 981c74985f6SBarry Smith MatSetOption(aij->B,op); 982c74985f6SBarry Smith } 983c74985f6SBarry Smith else if (op == COLUMN_ORIENTED) SETERR(1,"Column oriented not supported"); 984c74985f6SBarry Smith return 0; 985c74985f6SBarry Smith } 986c74985f6SBarry Smith 987d1710a03SLois Curfman McInnes static int MatGetSize_MPIAIJ(Mat matin,int *m,int *n) 988c74985f6SBarry Smith { 98944a69424SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 990c74985f6SBarry Smith *m = mat->M; *n = mat->N; 991c74985f6SBarry Smith return 0; 992c74985f6SBarry Smith } 993c74985f6SBarry Smith 994d1710a03SLois Curfman McInnes static int MatGetLocalSize_MPIAIJ(Mat matin,int *m,int *n) 995c74985f6SBarry Smith { 99644a69424SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 997c74985f6SBarry Smith *m = mat->m; *n = mat->n; 998c74985f6SBarry Smith return 0; 999c74985f6SBarry Smith } 1000c74985f6SBarry Smith 1001d1710a03SLois Curfman McInnes static int MatGetOwnershipRange_MPIAIJ(Mat matin,int *m,int *n) 1002c74985f6SBarry Smith { 100344a69424SLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 1004c74985f6SBarry Smith *m = mat->rstart; *n = mat->rend; 1005c74985f6SBarry Smith return 0; 1006c74985f6SBarry Smith } 1007c74985f6SBarry Smith 100839e00950SLois Curfman McInnes static int MatGetRow_MPIAIJ(Mat matin,int row,int *nz,int **idx,Scalar **v) 100939e00950SLois Curfman McInnes { 1010154123eaSLois Curfman McInnes Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data; 1011154123eaSLois Curfman McInnes Scalar *vworkA, *vworkB, **pvA, **pvB; 1012154123eaSLois Curfman McInnes int i, ierr, *cworkA, *cworkB, **pcA, **pcB, cstart = mat->cstart; 1013154123eaSLois Curfman McInnes int nztot, nzA, nzB, lrow, rstart = mat->rstart, rend = mat->rend; 101439e00950SLois Curfman McInnes 1015154123eaSLois Curfman McInnes if (!mat->assembled) 101639e00950SLois Curfman McInnes SETERR(1,"MatGetRow_MPIAIJ: Must assemble matrix first."); 101739e00950SLois Curfman McInnes if (row < rstart || row >= rend) 1018abc0e9e4SLois Curfman McInnes SETERR(1,"MatGetRow_MPIAIJ: Currently you can get only local rows.") 1019abc0e9e4SLois Curfman McInnes lrow = row - rstart; 102039e00950SLois Curfman McInnes 1021154123eaSLois Curfman McInnes pvA = &vworkA; pcA = &cworkA; pvB = &vworkB; pcB = &cworkB; 1022154123eaSLois Curfman McInnes if (!v) {pvA = 0; pvB = 0;} 1023154123eaSLois Curfman McInnes if (!idx) {pcA = 0; if (!v) pcB = 0;} 1024154123eaSLois Curfman McInnes ierr = MatGetRow(mat->A,lrow,&nzA,pcA,pvA); CHKERR(ierr); 1025154123eaSLois Curfman McInnes ierr = MatGetRow(mat->B,lrow,&nzB,pcB,pvB); CHKERR(ierr); 1026154123eaSLois Curfman McInnes nztot = nzA + nzB; 1027154123eaSLois Curfman McInnes 1028154123eaSLois Curfman McInnes if (v || idx) { 1029154123eaSLois Curfman McInnes if (nztot) { 1030154123eaSLois Curfman McInnes /* Sort by increasing column numbers, assuming A and B already sorted */ 1031154123eaSLois Curfman McInnes int imark, imark2; 1032154123eaSLois Curfman McInnes for (i=0; i<nzB; i++) cworkB[i] = mat->garray[cworkB[i]]; 1033154123eaSLois Curfman McInnes if (v) { 103439e00950SLois Curfman McInnes *v = (Scalar *) MALLOC( (nztot)*sizeof(Scalar) ); CHKPTR(*v); 103539e00950SLois Curfman McInnes for ( i=0; i<nzB; i++ ) { 1036154123eaSLois Curfman McInnes if (cworkB[i] < cstart) (*v)[i] = vworkB[i]; 1037154123eaSLois Curfman McInnes else break; 1038154123eaSLois Curfman McInnes } 1039154123eaSLois Curfman McInnes imark = i; 1040154123eaSLois Curfman McInnes for ( i=0; i<nzA; i++ ) (*v)[imark+i] = vworkA[i]; 1041154123eaSLois Curfman McInnes imark2 = imark+nzA; 1042154123eaSLois Curfman McInnes for ( i=imark; i<nzB; i++ ) (*v)[imark2+i] = vworkB[i]; 1043154123eaSLois Curfman McInnes } 1044154123eaSLois Curfman McInnes if (idx) { 1045154123eaSLois Curfman McInnes *idx = (int *) MALLOC( (nztot)*sizeof(int) ); CHKPTR(*idx); 1046154123eaSLois Curfman McInnes for (i=0; i<nzA; i++) cworkA[i] += cstart; 1047154123eaSLois Curfman McInnes for ( i=0; i<nzB; i++ ) { 1048154123eaSLois Curfman McInnes if (cworkB[i] < cstart) (*idx)[i] = cworkB[i]; 1049154123eaSLois Curfman McInnes else break; 1050154123eaSLois Curfman McInnes } 1051154123eaSLois Curfman McInnes imark = i; 1052154123eaSLois Curfman McInnes for ( i=0; i<nzA; i++ ) (*idx)[imark+i] = cworkA[i]; 1053154123eaSLois Curfman McInnes imark2 = imark+nzA; 1054154123eaSLois Curfman McInnes for ( i=imark; i<nzB; i++ ) (*idx)[imark2+i] = cworkB[i]; 105539e00950SLois Curfman McInnes } 105639e00950SLois Curfman McInnes } 105739e00950SLois Curfman McInnes else {*idx = 0; *v=0;} 1058154123eaSLois Curfman McInnes } 105939e00950SLois Curfman McInnes *nz = nztot; 1060154123eaSLois Curfman McInnes ierr = MatRestoreRow(mat->A,lrow,&nzA,pcA,pvA); CHKERR(ierr); 1061154123eaSLois Curfman McInnes ierr = MatRestoreRow(mat->B,lrow,&nzB,pcB,pvB); CHKERR(ierr); 106239e00950SLois Curfman McInnes return 0; 106339e00950SLois Curfman McInnes } 106439e00950SLois Curfman McInnes 106539e00950SLois Curfman McInnes static int MatRestoreRow_MPIAIJ(Mat mat,int row,int *nz,int **idx,Scalar **v) 106639e00950SLois Curfman McInnes { 1067154123eaSLois Curfman McInnes if (idx) FREE(*idx); 1068154123eaSLois Curfman McInnes if (v) FREE(*v); 106939e00950SLois Curfman McInnes return 0; 107039e00950SLois Curfman McInnes } 107139e00950SLois Curfman McInnes 1072fc76ce87SLois Curfman McInnes extern int MatConvert_MPIAIJ(Mat,MatType,Mat *); 107307a0e7adSLois Curfman McInnes static int MatCopy_MPIAIJ_Private(Mat,Mat *); 1074d6dfbf8fSBarry Smith 10758a729477SBarry Smith /* -------------------------------------------------------------------*/ 10762ee70a88SLois Curfman McInnes static struct _MatOps MatOps = {MatSetValues_MPIAIJ, 107739e00950SLois Curfman McInnes MatGetRow_MPIAIJ,MatRestoreRow_MPIAIJ, 107844a69424SLois Curfman McInnes MatMult_MPIAIJ,MatMultAdd_MPIAIJ, 107944a69424SLois Curfman McInnes MatMultTrans_MPIAIJ,MatMultTransAdd_MPIAIJ, 10801eb62cbbSBarry Smith 0,0,0,0, 10818a729477SBarry Smith 0,0, 108244a69424SLois Curfman McInnes MatRelax_MPIAIJ, 10838a729477SBarry Smith 0, 1084a66be287SLois Curfman McInnes MatGetInfo_MPIAIJ,0, 1085d1710a03SLois Curfman McInnes MatGetDiagonal_MPIAIJ,0,0, 1086ee50ffe9SBarry Smith MatAssemblyBegin_MPIAIJ,MatAssemblyEnd_MPIAIJ, 10871eb62cbbSBarry Smith 0, 10882ee70a88SLois Curfman McInnes MatSetOption_MPIAIJ,MatZeroEntries_MPIAIJ,MatZeroRows_MPIAIJ,0, 1089c74985f6SBarry Smith 0,0,0,0, 1090d1710a03SLois Curfman McInnes MatGetSize_MPIAIJ,MatGetLocalSize_MPIAIJ,MatGetOwnershipRange_MPIAIJ, 109177915d1cSLois Curfman McInnes 0,0, 109207a0e7adSLois Curfman McInnes 0,0,MatConvert_MPIAIJ,0,0,MatCopy_MPIAIJ_Private}; 10938a729477SBarry Smith 10948a729477SBarry Smith /*@ 1095ff756334SLois Curfman McInnes MatCreateMPIAIJ - Creates a sparse parallel matrix in AIJ format 1096ff756334SLois Curfman McInnes (the default parallel PETSc format). 10978a729477SBarry Smith 10988a729477SBarry Smith Input Parameters: 10991eb62cbbSBarry Smith . comm - MPI communicator 11007d3e4905SLois Curfman McInnes . m - number of local rows (or PETSC_DECIDE to have calculated if M is given) 11017d3e4905SLois Curfman McInnes . n - number of local columns (or PETSC_DECIDE to have calculated 11027d3e4905SLois Curfman McInnes if N is given) 11037d3e4905SLois Curfman McInnes . M - number of global rows (or PETSC_DECIDE to have calculated if m is given) 11047d3e4905SLois Curfman McInnes . N - number of global columns (or PETSC_DECIDE to have calculated 11057d3e4905SLois Curfman McInnes if n is given) 1106ff756334SLois Curfman McInnes . d_nz - number of nonzeros per row in diagonal portion of matrix 1107ff756334SLois Curfman McInnes (same for all local rows) 11081eb62cbbSBarry Smith . d_nzz - number of nonzeros per row in diagonal portion of matrix or null 1109ff756334SLois Curfman McInnes (possibly different for each row). You must leave room for the 1110ff756334SLois Curfman McInnes diagonal entry even if it is zero. 1111ff756334SLois Curfman McInnes . o_nz - number of nonzeros per row in off-diagonal portion of matrix 1112ff756334SLois Curfman McInnes (same for all local rows) 11131eb62cbbSBarry Smith . o_nzz - number of nonzeros per row in off-diagonal portion of matrix 1114ff756334SLois Curfman McInnes or null (possibly different for each row). 11158a729477SBarry Smith 1116ff756334SLois Curfman McInnes Output Parameter: 11178a729477SBarry Smith . newmat - the matrix 11188a729477SBarry Smith 1119ff756334SLois Curfman McInnes Notes: 1120ff756334SLois Curfman McInnes The AIJ format (also called the Yale sparse matrix format or 1121ff756334SLois Curfman McInnes compressed row storage), is fully compatible with standard Fortran 77 1122ff756334SLois Curfman McInnes storage. That is, the stored row and column indices begin at 1123ff756334SLois Curfman McInnes one, not zero. 1124ff756334SLois Curfman McInnes 1125ff756334SLois Curfman McInnes The user MUST specify either the local or global matrix dimensions 1126ff756334SLois Curfman McInnes (possibly both). 1127ff756334SLois Curfman McInnes 1128ff756334SLois Curfman McInnes The user can set d_nz, d_nnz, o_nz, and o_nnz to zero for PETSc to 1129ff756334SLois Curfman McInnes control dynamic memory allocation. 1130ff756334SLois Curfman McInnes 1131ff756334SLois Curfman McInnes .keywords: Mat, matrix, aij, compressed row, sparse, parallel 1132ff756334SLois Curfman McInnes 1133ff756334SLois Curfman McInnes .seealso: MatCreateSequentialAIJ(), MatSetValues() 11348a729477SBarry Smith @*/ 11351eb62cbbSBarry Smith int MatCreateMPIAIJ(MPI_Comm comm,int m,int n,int M,int N, 11361eb62cbbSBarry Smith int d_nz,int *d_nnz, int o_nz,int *o_nnz,Mat *newmat) 11378a729477SBarry Smith { 11388a729477SBarry Smith Mat mat; 113944a69424SLois Curfman McInnes Mat_MPIAIJ *aij; 11406abc6512SBarry Smith int ierr, i,sum[2],work[2]; 11418a729477SBarry Smith *newmat = 0; 114244a69424SLois Curfman McInnes PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATMPIAIJ,comm); 1143a5a9c739SBarry Smith PLogObjectCreate(mat); 114444a69424SLois Curfman McInnes mat->data = (void *) (aij = NEW(Mat_MPIAIJ)); CHKPTR(aij); 11458a729477SBarry Smith mat->ops = &MatOps; 114644a69424SLois Curfman McInnes mat->destroy = MatDestroy_MPIAIJ; 114744a69424SLois Curfman McInnes mat->view = MatView_MPIAIJ; 11488a729477SBarry Smith mat->factor = 0; 1149d6dfbf8fSBarry Smith 1150d6dfbf8fSBarry Smith mat->comm = comm; 115107a0e7adSLois Curfman McInnes aij->insertmode = NOTSETVALUES; 11521eb62cbbSBarry Smith MPI_Comm_rank(comm,&aij->mytid); 11531eb62cbbSBarry Smith MPI_Comm_size(comm,&aij->numtids); 11541eb62cbbSBarry Smith 11551eb62cbbSBarry Smith if (M == -1 || N == -1) { 11561eb62cbbSBarry Smith work[0] = m; work[1] = n; 1157d6dfbf8fSBarry Smith MPI_Allreduce((void *) work,(void *) sum,2,MPI_INT,MPI_SUM,comm ); 11581eb62cbbSBarry Smith if (M == -1) M = sum[0]; 11591eb62cbbSBarry Smith if (N == -1) N = sum[1]; 11601eb62cbbSBarry Smith } 11611eb62cbbSBarry Smith if (m == -1) {m = M/aij->numtids + ((M % aij->numtids) > aij->mytid);} 11621eb62cbbSBarry Smith if (n == -1) {n = N/aij->numtids + ((N % aij->numtids) > aij->mytid);} 11638a729477SBarry Smith aij->m = m; 11648a729477SBarry Smith aij->n = n; 11651eb62cbbSBarry Smith aij->N = N; 11661eb62cbbSBarry Smith aij->M = M; 11671eb62cbbSBarry Smith 11681eb62cbbSBarry Smith /* build local table of row and column ownerships */ 11691eb62cbbSBarry Smith aij->rowners = (int *) MALLOC(2*(aij->numtids+2)*sizeof(int)); 11701eb62cbbSBarry Smith CHKPTR(aij->rowners); 11711eb62cbbSBarry Smith aij->cowners = aij->rowners + aij->numtids + 1; 11721eb62cbbSBarry Smith MPI_Allgather(&m,1,MPI_INT,aij->rowners+1,1,MPI_INT,comm); 11731eb62cbbSBarry Smith aij->rowners[0] = 0; 11741eb62cbbSBarry Smith for ( i=2; i<=aij->numtids; i++ ) { 11751eb62cbbSBarry Smith aij->rowners[i] += aij->rowners[i-1]; 11768a729477SBarry Smith } 11771eb62cbbSBarry Smith aij->rstart = aij->rowners[aij->mytid]; 11781eb62cbbSBarry Smith aij->rend = aij->rowners[aij->mytid+1]; 11791eb62cbbSBarry Smith MPI_Allgather(&n,1,MPI_INT,aij->cowners+1,1,MPI_INT,comm); 11801eb62cbbSBarry Smith aij->cowners[0] = 0; 11811eb62cbbSBarry Smith for ( i=2; i<=aij->numtids; i++ ) { 11821eb62cbbSBarry Smith aij->cowners[i] += aij->cowners[i-1]; 11838a729477SBarry Smith } 11841eb62cbbSBarry Smith aij->cstart = aij->cowners[aij->mytid]; 11851eb62cbbSBarry Smith aij->cend = aij->cowners[aij->mytid+1]; 11868a729477SBarry Smith 11878a729477SBarry Smith 11886b5873e3SBarry Smith ierr = MatCreateSequentialAIJ(MPI_COMM_SELF,m,n,d_nz,d_nnz,&aij->A); 11896b5873e3SBarry Smith CHKERR(ierr); 1190a5a9c739SBarry Smith PLogObjectParent(mat,aij->A); 11916b5873e3SBarry Smith ierr = MatCreateSequentialAIJ(MPI_COMM_SELF,m,N,o_nz,o_nnz,&aij->B); 11926b5873e3SBarry Smith CHKERR(ierr); 1193a5a9c739SBarry Smith PLogObjectParent(mat,aij->B); 11948a729477SBarry Smith 11951eb62cbbSBarry Smith /* build cache for off array entries formed */ 11961eb62cbbSBarry Smith aij->stash.nmax = CHUNCKSIZE; /* completely arbratray number */ 11971eb62cbbSBarry Smith aij->stash.n = 0; 11981eb62cbbSBarry Smith aij->stash.array = (Scalar *) MALLOC( aij->stash.nmax*(2*sizeof(int) + 11991eb62cbbSBarry Smith sizeof(Scalar))); CHKPTR(aij->stash.array); 12001eb62cbbSBarry Smith aij->stash.idx = (int *) (aij->stash.array + aij->stash.nmax); 12011eb62cbbSBarry Smith aij->stash.idy = (int *) (aij->stash.idx + aij->stash.nmax); 12029e25ed09SBarry Smith aij->colmap = 0; 12039e25ed09SBarry Smith aij->garray = 0; 12048a729477SBarry Smith 12051eb62cbbSBarry Smith /* stuff used for matrix vector multiply */ 12061eb62cbbSBarry Smith aij->lvec = 0; 12071eb62cbbSBarry Smith aij->Mvctx = 0; 1208d6dfbf8fSBarry Smith aij->assembled = 0; 12098a729477SBarry Smith 1210d6dfbf8fSBarry Smith *newmat = mat; 1211d6dfbf8fSBarry Smith return 0; 1212d6dfbf8fSBarry Smith } 1213c74985f6SBarry Smith 121407a0e7adSLois Curfman McInnes static int MatCopy_MPIAIJ_Private(Mat matin,Mat *newmat) 1215d6dfbf8fSBarry Smith { 1216d6dfbf8fSBarry Smith Mat mat; 121744a69424SLois Curfman McInnes Mat_MPIAIJ *aij,*oldmat = (Mat_MPIAIJ *) matin->data; 12182ee70a88SLois Curfman McInnes int ierr, len; 1219d6dfbf8fSBarry Smith *newmat = 0; 1220d6dfbf8fSBarry Smith 1221d6dfbf8fSBarry Smith if (!oldmat->assembled) SETERR(1,"Cannot copy unassembled matrix"); 122244a69424SLois Curfman McInnes PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATMPIAIJ,matin->comm); 1223a5a9c739SBarry Smith PLogObjectCreate(mat); 122444a69424SLois Curfman McInnes mat->data = (void *) (aij = NEW(Mat_MPIAIJ)); CHKPTR(aij); 1225d6dfbf8fSBarry Smith mat->ops = &MatOps; 122644a69424SLois Curfman McInnes mat->destroy = MatDestroy_MPIAIJ; 122744a69424SLois Curfman McInnes mat->view = MatView_MPIAIJ; 1228d6dfbf8fSBarry Smith mat->factor = matin->factor; 1229d6dfbf8fSBarry Smith 1230d6dfbf8fSBarry Smith aij->m = oldmat->m; 1231d6dfbf8fSBarry Smith aij->n = oldmat->n; 1232d6dfbf8fSBarry Smith aij->M = oldmat->M; 1233d6dfbf8fSBarry Smith aij->N = oldmat->N; 1234d6dfbf8fSBarry Smith 1235d6dfbf8fSBarry Smith aij->assembled = 1; 1236d6dfbf8fSBarry Smith aij->rstart = oldmat->rstart; 1237d6dfbf8fSBarry Smith aij->rend = oldmat->rend; 1238d6dfbf8fSBarry Smith aij->cstart = oldmat->cstart; 1239d6dfbf8fSBarry Smith aij->cend = oldmat->cend; 1240d6dfbf8fSBarry Smith aij->numtids = oldmat->numtids; 1241d6dfbf8fSBarry Smith aij->mytid = oldmat->mytid; 124207a0e7adSLois Curfman McInnes aij->insertmode = NOTSETVALUES; 1243d6dfbf8fSBarry Smith 1244d6dfbf8fSBarry Smith aij->rowners = (int *) MALLOC( (aij->numtids+1)*sizeof(int) ); 1245d6dfbf8fSBarry Smith CHKPTR(aij->rowners); 1246d6dfbf8fSBarry Smith MEMCPY(aij->rowners,oldmat->rowners,(aij->numtids+1)*sizeof(int)); 1247d6dfbf8fSBarry Smith aij->stash.nmax = 0; 1248d6dfbf8fSBarry Smith aij->stash.n = 0; 1249d6dfbf8fSBarry Smith aij->stash.array = 0; 12502ee70a88SLois Curfman McInnes if (oldmat->colmap) { 12512ee70a88SLois Curfman McInnes aij->colmap = (int *) MALLOC( (aij->N)*sizeof(int) ); 12522ee70a88SLois Curfman McInnes CHKPTR(aij->colmap); 12532ee70a88SLois Curfman McInnes MEMCPY(aij->colmap,oldmat->colmap,(aij->N)*sizeof(int)); 12542ee70a88SLois Curfman McInnes } else aij->colmap = 0; 12552ee70a88SLois Curfman McInnes if (oldmat->garray && (len = ((Mat_AIJ *) (oldmat->B->data))->n)) { 12562ee70a88SLois Curfman McInnes aij->garray = (int *) MALLOC(len*sizeof(int) ); CHKPTR(aij->garray); 12572ee70a88SLois Curfman McInnes MEMCPY(aij->garray,oldmat->garray,len*sizeof(int)); 12582ee70a88SLois Curfman McInnes } else aij->garray = 0; 1259d6dfbf8fSBarry Smith mat->comm = matin->comm; 1260d6dfbf8fSBarry Smith 1261d6dfbf8fSBarry Smith ierr = VecCreate(oldmat->lvec,&aij->lvec); CHKERR(ierr); 1262a5a9c739SBarry Smith PLogObjectParent(mat,aij->lvec); 1263d6dfbf8fSBarry Smith ierr = VecScatterCtxCopy(oldmat->Mvctx,&aij->Mvctx); CHKERR(ierr); 1264a5a9c739SBarry Smith PLogObjectParent(mat,aij->Mvctx); 126507a0e7adSLois Curfman McInnes ierr = MatConvert(oldmat->A,MATSAME,&aij->A); CHKERR(ierr); 1266a5a9c739SBarry Smith PLogObjectParent(mat,aij->A); 126707a0e7adSLois Curfman McInnes ierr = MatConvert(oldmat->B,MATSAME,&aij->B); CHKERR(ierr); 1268a5a9c739SBarry Smith PLogObjectParent(mat,aij->B); 12698a729477SBarry Smith *newmat = mat; 12708a729477SBarry Smith return 0; 12718a729477SBarry Smith } 1272