xref: /petsc/src/mat/impls/aij/mpi/mpiaij.c (revision a56f8943f3fafb7f5738b4b09a10268b4618f3ef)
1cb512458SBarry Smith #ifndef lint
2*a56f8943SBarry Smith static char vcid[] = "$Id: mpiaij.c,v 1.92 1995/10/20 01:59:55 curfman Exp bsmith $";
3cb512458SBarry Smith #endif
48a729477SBarry Smith 
51eb62cbbSBarry Smith #include "mpiaij.h"
68a729477SBarry Smith #include "vec/vecimpl.h"
7d6dfbf8fSBarry Smith #include "inline/spops.h"
88a729477SBarry Smith 
99e25ed09SBarry Smith /* local utility routine that creates a mapping from the global column
109e25ed09SBarry Smith number to the local number in the off-diagonal part of the local
119e25ed09SBarry Smith storage of the matrix.  This is done in a non scable way since the
129e25ed09SBarry Smith length of colmap equals the global matrix length.
139e25ed09SBarry Smith */
14b7c46309SBarry Smith static int CreateColmap_Private(Mat mat)
159e25ed09SBarry Smith {
1644a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
17ec8511deSBarry Smith   Mat_SeqAIJ *B = (Mat_SeqAIJ*) aij->B->data;
18416022c9SBarry Smith   int        n = B->n,i,shift = B->indexshift;
19dbb450caSBarry Smith 
2078b31e54SBarry Smith   aij->colmap = (int *) PETSCMALLOC(aij->N*sizeof(int));CHKPTRQ(aij->colmap);
21464493b3SBarry Smith   PLogObjectMemory(mat,aij->N*sizeof(int));
22416022c9SBarry Smith   PetscZero(aij->colmap,aij->N*sizeof(int));
23dbb450caSBarry Smith   for ( i=0; i<n; i++ ) aij->colmap[aij->garray[i]] = i-shift;
249e25ed09SBarry Smith   return 0;
259e25ed09SBarry Smith }
269e25ed09SBarry Smith 
272493cbb0SBarry Smith extern int DisAssemble_MPIAIJ(Mat);
282493cbb0SBarry Smith 
2951c98ccdSLois Curfman McInnes static int MatGetReordering_MPIAIJ(Mat mat,MatOrdering type,IS *rperm,IS *cperm)
30299609e3SLois Curfman McInnes {
31299609e3SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
32299609e3SLois Curfman McInnes   int ierr;
3317699dbbSLois Curfman McInnes   if (aij->size == 1) {
3451c98ccdSLois Curfman McInnes     ierr = MatGetReordering(aij->A,type,rperm,cperm); CHKERRQ(ierr);
3548d91487SBarry Smith   } else SETERRQ(1,"MatGetReordering_MPIAIJ:not supported in parallel");
36299609e3SLois Curfman McInnes   return 0;
37299609e3SLois Curfman McInnes }
38299609e3SLois Curfman McInnes 
392ee70a88SLois Curfman McInnes static int MatSetValues_MPIAIJ(Mat mat,int m,int *idxm,int n,
401eb62cbbSBarry Smith                                int *idxn,Scalar *v,InsertMode addv)
418a729477SBarry Smith {
4244a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
43dbb450caSBarry Smith   Mat_SeqAIJ *C = (Mat_SeqAIJ*) aij->A->data;
441eb62cbbSBarry Smith   int        ierr,i,j, rstart = aij->rstart, rend = aij->rend;
451eb62cbbSBarry Smith   int        cstart = aij->cstart, cend = aij->cend,row,col;
46dbb450caSBarry Smith   int        shift = C->indexshift;
478a729477SBarry Smith 
4864119d58SLois Curfman McInnes   if (aij->insertmode != NOT_SET_VALUES && aij->insertmode != addv) {
4948d91487SBarry Smith     SETERRQ(1,"MatSetValues_MPIAIJ:Cannot mix inserts and adds");
508a729477SBarry Smith   }
511eb62cbbSBarry Smith   aij->insertmode = addv;
528a729477SBarry Smith   for ( i=0; i<m; i++ ) {
53bbb6d6a8SBarry Smith     if (idxm[i] < 0) SETERRQ(1,"MatSetValues_MPIAIJ:Negative row");
54bbb6d6a8SBarry Smith     if (idxm[i] >= aij->M) SETERRQ(1,"MatSetValues_MPIAIJ:Row too large");
551eb62cbbSBarry Smith     if (idxm[i] >= rstart && idxm[i] < rend) {
561eb62cbbSBarry Smith       row = idxm[i] - rstart;
571eb62cbbSBarry Smith       for ( j=0; j<n; j++ ) {
58bbb6d6a8SBarry Smith         if (idxn[j] < 0) SETERRQ(1,"MatSetValues_MPIAIJ:Negative column");
59bbb6d6a8SBarry Smith         if (idxn[j] >= aij->N) SETERRQ(1,"MatSetValues_MPIAIJ:Col too large");
601eb62cbbSBarry Smith         if (idxn[j] >= cstart && idxn[j] < cend){
611eb62cbbSBarry Smith           col = idxn[j] - cstart;
6278b31e54SBarry Smith           ierr = MatSetValues(aij->A,1,&row,1,&col,v+i*n+j,addv);CHKERRQ(ierr);
631eb62cbbSBarry Smith         }
641eb62cbbSBarry Smith         else {
65d6dfbf8fSBarry Smith           if (aij->assembled) {
66b7c46309SBarry Smith             if (!aij->colmap) {ierr = CreateColmap_Private(mat);CHKERRQ(ierr);}
67dbb450caSBarry Smith             col = aij->colmap[idxn[j]] + shift;
68ec8511deSBarry Smith             if (col < 0 && !((Mat_SeqAIJ*)(aij->A->data))->nonew) {
692493cbb0SBarry Smith               ierr = DisAssemble_MPIAIJ(mat); CHKERRQ(ierr);
702493cbb0SBarry Smith               col =  idxn[j];
71d6dfbf8fSBarry Smith             }
729e25ed09SBarry Smith           }
739e25ed09SBarry Smith           else col = idxn[j];
7478b31e54SBarry Smith           ierr = MatSetValues(aij->B,1,&row,1,&col,v+i*n+j,addv);CHKERRQ(ierr);
751eb62cbbSBarry Smith         }
761eb62cbbSBarry Smith       }
771eb62cbbSBarry Smith     }
781eb62cbbSBarry Smith     else {
79416022c9SBarry Smith       ierr = StashValues_Private(&aij->stash,idxm[i],n,idxn,v+i*n,addv);CHKERRQ(ierr);
801eb62cbbSBarry Smith     }
818a729477SBarry Smith   }
828a729477SBarry Smith   return 0;
838a729477SBarry Smith }
848a729477SBarry Smith 
85fc76ce87SLois Curfman McInnes static int MatAssemblyBegin_MPIAIJ(Mat mat,MatAssemblyType mode)
868a729477SBarry Smith {
8744a69424SLois Curfman McInnes   Mat_MPIAIJ  *aij = (Mat_MPIAIJ *) mat->data;
88d6dfbf8fSBarry Smith   MPI_Comm    comm = mat->comm;
8917699dbbSLois Curfman McInnes   int         size = aij->size, *owners = aij->rowners;
9017699dbbSLois Curfman McInnes   int         rank = aij->rank,tag = mat->tag, *owner,*starts,count,ierr;
911eb62cbbSBarry Smith   MPI_Request *send_waits,*recv_waits;
926abc6512SBarry Smith   int         *nprocs,i,j,idx,*procs,nsends,nreceives,nmax,*work;
931eb62cbbSBarry Smith   InsertMode  addv;
941eb62cbbSBarry Smith   Scalar      *rvalues,*svalues;
951eb62cbbSBarry Smith 
961eb62cbbSBarry Smith   /* make sure all processors are either in INSERTMODE or ADDMODE */
97d65a2f8fSBarry Smith   MPI_Allreduce(&aij->insertmode,&addv,1,MPI_INT,MPI_BOR,comm);
98dbb450caSBarry Smith   if (addv == (ADD_VALUES|INSERT_VALUES)) {
99bbb6d6a8SBarry Smith     SETERRQ(1,"MatAssemblyBegin_MPIAIJ:Some processors inserted others added");
1001eb62cbbSBarry Smith   }
1011eb62cbbSBarry Smith   aij->insertmode = addv; /* in case this processor had no cache */
1021eb62cbbSBarry Smith 
1031eb62cbbSBarry Smith   /*  first count number of contributors to each processor */
10417699dbbSLois Curfman McInnes   nprocs = (int *) PETSCMALLOC( 2*size*sizeof(int) ); CHKPTRQ(nprocs);
10517699dbbSLois Curfman McInnes   PetscZero(nprocs,2*size*sizeof(int)); procs = nprocs + size;
10678b31e54SBarry Smith   owner = (int *) PETSCMALLOC( (aij->stash.n+1)*sizeof(int) ); CHKPTRQ(owner);
1071eb62cbbSBarry Smith   for ( i=0; i<aij->stash.n; i++ ) {
1081eb62cbbSBarry Smith     idx = aij->stash.idx[i];
10917699dbbSLois Curfman McInnes     for ( j=0; j<size; j++ ) {
1101eb62cbbSBarry Smith       if (idx >= owners[j] && idx < owners[j+1]) {
1111eb62cbbSBarry Smith         nprocs[j]++; procs[j] = 1; owner[i] = j; break;
1128a729477SBarry Smith       }
1138a729477SBarry Smith     }
1148a729477SBarry Smith   }
11517699dbbSLois Curfman McInnes   nsends = 0;  for ( i=0; i<size; i++ ) { nsends += procs[i];}
1161eb62cbbSBarry Smith 
1171eb62cbbSBarry Smith   /* inform other processors of number of messages and max length*/
11817699dbbSLois Curfman McInnes   work = (int *) PETSCMALLOC( size*sizeof(int) ); CHKPTRQ(work);
11917699dbbSLois Curfman McInnes   MPI_Allreduce(procs, work,size,MPI_INT,MPI_SUM,comm);
12017699dbbSLois Curfman McInnes   nreceives = work[rank];
12117699dbbSLois Curfman McInnes   MPI_Allreduce( nprocs, work,size,MPI_INT,MPI_MAX,comm);
12217699dbbSLois Curfman McInnes   nmax = work[rank];
12378b31e54SBarry Smith   PETSCFREE(work);
1241eb62cbbSBarry Smith 
1251eb62cbbSBarry Smith   /* post receives:
1261eb62cbbSBarry Smith        1) each message will consist of ordered pairs
1271eb62cbbSBarry Smith      (global index,value) we store the global index as a double
128d6dfbf8fSBarry Smith      to simplify the message passing.
1291eb62cbbSBarry Smith        2) since we don't know how long each individual message is we
1301eb62cbbSBarry Smith      allocate the largest needed buffer for each receive. Potentially
1311eb62cbbSBarry Smith      this is a lot of wasted space.
1321eb62cbbSBarry Smith 
1331eb62cbbSBarry Smith 
1341eb62cbbSBarry Smith        This could be done better.
1351eb62cbbSBarry Smith   */
13678b31e54SBarry Smith   rvalues = (Scalar *) PETSCMALLOC(3*(nreceives+1)*(nmax+1)*sizeof(Scalar));
13778b31e54SBarry Smith   CHKPTRQ(rvalues);
13878b31e54SBarry Smith   recv_waits = (MPI_Request *) PETSCMALLOC((nreceives+1)*sizeof(MPI_Request));
13978b31e54SBarry Smith   CHKPTRQ(recv_waits);
1401eb62cbbSBarry Smith   for ( i=0; i<nreceives; i++ ) {
141416022c9SBarry Smith     MPI_Irecv(rvalues+3*nmax*i,3*nmax,MPIU_SCALAR,MPI_ANY_SOURCE,tag,
1421eb62cbbSBarry Smith               comm,recv_waits+i);
1431eb62cbbSBarry Smith   }
1441eb62cbbSBarry Smith 
1451eb62cbbSBarry Smith   /* do sends:
1461eb62cbbSBarry Smith       1) starts[i] gives the starting index in svalues for stuff going to
1471eb62cbbSBarry Smith          the ith processor
1481eb62cbbSBarry Smith   */
149416022c9SBarry Smith   svalues = (Scalar *) PETSCMALLOC(3*(aij->stash.n+1)*sizeof(Scalar));CHKPTRQ(svalues);
15078b31e54SBarry Smith   send_waits = (MPI_Request *) PETSCMALLOC( (nsends+1)*sizeof(MPI_Request));
15178b31e54SBarry Smith   CHKPTRQ(send_waits);
15217699dbbSLois Curfman McInnes   starts = (int *) PETSCMALLOC( size*sizeof(int) ); CHKPTRQ(starts);
1531eb62cbbSBarry Smith   starts[0] = 0;
15417699dbbSLois Curfman McInnes   for ( i=1; i<size; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
1551eb62cbbSBarry Smith   for ( i=0; i<aij->stash.n; i++ ) {
1561eb62cbbSBarry Smith     svalues[3*starts[owner[i]]]       = (Scalar)  aij->stash.idx[i];
1571eb62cbbSBarry Smith     svalues[3*starts[owner[i]]+1]     = (Scalar)  aij->stash.idy[i];
1581eb62cbbSBarry Smith     svalues[3*(starts[owner[i]]++)+2] =  aij->stash.array[i];
1591eb62cbbSBarry Smith   }
16078b31e54SBarry Smith   PETSCFREE(owner);
1611eb62cbbSBarry Smith   starts[0] = 0;
16217699dbbSLois Curfman McInnes   for ( i=1; i<size; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
1631eb62cbbSBarry Smith   count = 0;
16417699dbbSLois Curfman McInnes   for ( i=0; i<size; i++ ) {
1651eb62cbbSBarry Smith     if (procs[i]) {
166416022c9SBarry Smith       MPI_Isend(svalues+3*starts[i],3*nprocs[i],MPIU_SCALAR,i,tag,
1671eb62cbbSBarry Smith                 comm,send_waits+count++);
1681eb62cbbSBarry Smith     }
1691eb62cbbSBarry Smith   }
17078b31e54SBarry Smith   PETSCFREE(starts); PETSCFREE(nprocs);
1711eb62cbbSBarry Smith 
1721eb62cbbSBarry Smith   /* Free cache space */
17378b31e54SBarry Smith   ierr = StashDestroy_Private(&aij->stash); CHKERRQ(ierr);
1741eb62cbbSBarry Smith 
1751eb62cbbSBarry Smith   aij->svalues    = svalues;    aij->rvalues    = rvalues;
1761eb62cbbSBarry Smith   aij->nsends     = nsends;     aij->nrecvs     = nreceives;
1771eb62cbbSBarry Smith   aij->send_waits = send_waits; aij->recv_waits = recv_waits;
1781eb62cbbSBarry Smith   aij->rmax       = nmax;
1791eb62cbbSBarry Smith 
1801eb62cbbSBarry Smith   return 0;
1811eb62cbbSBarry Smith }
18244a69424SLois Curfman McInnes extern int MatSetUpMultiply_MPIAIJ(Mat);
1831eb62cbbSBarry Smith 
184fc76ce87SLois Curfman McInnes static int MatAssemblyEnd_MPIAIJ(Mat mat,MatAssemblyType mode)
1851eb62cbbSBarry Smith {
18644a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
187dbb450caSBarry Smith   Mat_SeqAIJ *C = (Mat_SeqAIJ *) aij->A->data;
1881eb62cbbSBarry Smith   MPI_Status  *send_status,recv_status;
189416022c9SBarry Smith   int         imdex,nrecvs = aij->nrecvs, count = nrecvs, i, n, ierr;
190416022c9SBarry Smith   int         row,col,other_disassembled,shift = C->indexshift;
1911eb62cbbSBarry Smith   Scalar      *values,val;
1921eb62cbbSBarry Smith   InsertMode  addv = aij->insertmode;
1931eb62cbbSBarry Smith 
1941eb62cbbSBarry Smith   /*  wait on receives */
1951eb62cbbSBarry Smith   while (count) {
196d6dfbf8fSBarry Smith     MPI_Waitany(nrecvs,aij->recv_waits,&imdex,&recv_status);
1971eb62cbbSBarry Smith     /* unpack receives into our local space */
198d6dfbf8fSBarry Smith     values = aij->rvalues + 3*imdex*aij->rmax;
199c60448a5SBarry Smith     MPI_Get_count(&recv_status,MPIU_SCALAR,&n);
2001eb62cbbSBarry Smith     n = n/3;
2011eb62cbbSBarry Smith     for ( i=0; i<n; i++ ) {
2021eb62cbbSBarry Smith       row = (int) PETSCREAL(values[3*i]) - aij->rstart;
2031eb62cbbSBarry Smith       col = (int) PETSCREAL(values[3*i+1]);
2041eb62cbbSBarry Smith       val = values[3*i+2];
2051eb62cbbSBarry Smith       if (col >= aij->cstart && col < aij->cend) {
2061eb62cbbSBarry Smith         col -= aij->cstart;
2071eb62cbbSBarry Smith         MatSetValues(aij->A,1,&row,1,&col,&val,addv);
2081eb62cbbSBarry Smith       }
2091eb62cbbSBarry Smith       else {
210d6dfbf8fSBarry Smith         if (aij->assembled) {
211b7c46309SBarry Smith           if (!aij->colmap) {ierr = CreateColmap_Private(mat);CHKERRQ(ierr);}
212dbb450caSBarry Smith           col = aij->colmap[col] + shift;
213ec8511deSBarry Smith           if (col < 0  && !((Mat_SeqAIJ*)(aij->A->data))->nonew) {
2142493cbb0SBarry Smith             ierr = DisAssemble_MPIAIJ(mat); CHKERRQ(ierr);
2152493cbb0SBarry Smith             col = (int) PETSCREAL(values[3*i+1]);
216d6dfbf8fSBarry Smith           }
2179e25ed09SBarry Smith         }
2181eb62cbbSBarry Smith         MatSetValues(aij->B,1,&row,1,&col,&val,addv);
2191eb62cbbSBarry Smith       }
2201eb62cbbSBarry Smith     }
2211eb62cbbSBarry Smith     count--;
2221eb62cbbSBarry Smith   }
22378b31e54SBarry Smith   PETSCFREE(aij->recv_waits); PETSCFREE(aij->rvalues);
2241eb62cbbSBarry Smith 
2251eb62cbbSBarry Smith   /* wait on sends */
2261eb62cbbSBarry Smith   if (aij->nsends) {
22778b31e54SBarry Smith     send_status = (MPI_Status *) PETSCMALLOC(aij->nsends*sizeof(MPI_Status));
22878b31e54SBarry Smith     CHKPTRQ(send_status);
2291eb62cbbSBarry Smith     MPI_Waitall(aij->nsends,aij->send_waits,send_status);
23078b31e54SBarry Smith     PETSCFREE(send_status);
2311eb62cbbSBarry Smith   }
23278b31e54SBarry Smith   PETSCFREE(aij->send_waits); PETSCFREE(aij->svalues);
2331eb62cbbSBarry Smith 
23464119d58SLois Curfman McInnes   aij->insertmode = NOT_SET_VALUES;
23578b31e54SBarry Smith   ierr = MatAssemblyBegin(aij->A,mode); CHKERRQ(ierr);
23678b31e54SBarry Smith   ierr = MatAssemblyEnd(aij->A,mode); CHKERRQ(ierr);
2371eb62cbbSBarry Smith 
2382493cbb0SBarry Smith   /* determine if any processor has disassembled, if so we must
2392493cbb0SBarry Smith      also disassemble ourselfs, in order that we may reassemble. */
240416022c9SBarry Smith   MPI_Allreduce(&aij->assembled,&other_disassembled,1,MPI_INT,MPI_PROD,mat->comm);
2412493cbb0SBarry Smith   if (aij->assembled && !other_disassembled) {
2422493cbb0SBarry Smith     ierr = DisAssemble_MPIAIJ(mat); CHKERRQ(ierr);
2432493cbb0SBarry Smith   }
2442493cbb0SBarry Smith 
2455e42470aSBarry Smith   if (!aij->assembled && mode == FINAL_ASSEMBLY) {
24678b31e54SBarry Smith     ierr = MatSetUpMultiply_MPIAIJ(mat); CHKERRQ(ierr);
247d6dfbf8fSBarry Smith     aij->assembled = 1;
2485e42470aSBarry Smith   }
24978b31e54SBarry Smith   ierr = MatAssemblyBegin(aij->B,mode); CHKERRQ(ierr);
25078b31e54SBarry Smith   ierr = MatAssemblyEnd(aij->B,mode); CHKERRQ(ierr);
2515e42470aSBarry Smith 
2528a729477SBarry Smith   return 0;
2538a729477SBarry Smith }
2548a729477SBarry Smith 
2552ee70a88SLois Curfman McInnes static int MatZeroEntries_MPIAIJ(Mat A)
2561eb62cbbSBarry Smith {
25744a69424SLois Curfman McInnes   Mat_MPIAIJ *l = (Mat_MPIAIJ *) A->data;
258dbd7a890SLois Curfman McInnes   int        ierr;
25978b31e54SBarry Smith   ierr = MatZeroEntries(l->A); CHKERRQ(ierr);
26078b31e54SBarry Smith   ierr = MatZeroEntries(l->B); CHKERRQ(ierr);
2611eb62cbbSBarry Smith   return 0;
2621eb62cbbSBarry Smith }
2631eb62cbbSBarry Smith 
2641eb62cbbSBarry Smith /* the code does not do the diagonal entries correctly unless the
2651eb62cbbSBarry Smith    matrix is square and the column and row owerships are identical.
2661eb62cbbSBarry Smith    This is a BUG. The only way to fix it seems to be to access
2671eb62cbbSBarry Smith    aij->A and aij->B directly and not through the MatZeroRows()
2681eb62cbbSBarry Smith    routine.
2691eb62cbbSBarry Smith */
27044a69424SLois Curfman McInnes static int MatZeroRows_MPIAIJ(Mat A,IS is,Scalar *diag)
2711eb62cbbSBarry Smith {
27244a69424SLois Curfman McInnes   Mat_MPIAIJ     *l = (Mat_MPIAIJ *) A->data;
27317699dbbSLois Curfman McInnes   int            i,ierr,N, *rows,*owners = l->rowners,size = l->size;
2746abc6512SBarry Smith   int            *procs,*nprocs,j,found,idx,nsends,*work;
27517699dbbSLois Curfman McInnes   int            nmax,*svalues,*starts,*owner,nrecvs,rank = l->rank;
2765392566eSBarry Smith   int            *rvalues,tag = A->tag,count,base,slen,n,*source;
277d6dfbf8fSBarry Smith   int            *lens,imdex,*lrows,*values;
278d6dfbf8fSBarry Smith   MPI_Comm       comm = A->comm;
2791eb62cbbSBarry Smith   MPI_Request    *send_waits,*recv_waits;
2801eb62cbbSBarry Smith   MPI_Status     recv_status,*send_status;
2811eb62cbbSBarry Smith   IS             istmp;
2821eb62cbbSBarry Smith 
28348d91487SBarry Smith   if (!l->assembled) SETERRQ(1,"MatZeroRows_MPIAIJ:Must assemble matrix");
28478b31e54SBarry Smith   ierr = ISGetLocalSize(is,&N); CHKERRQ(ierr);
28578b31e54SBarry Smith   ierr = ISGetIndices(is,&rows); CHKERRQ(ierr);
2861eb62cbbSBarry Smith 
2871eb62cbbSBarry Smith   /*  first count number of contributors to each processor */
28817699dbbSLois Curfman McInnes   nprocs = (int *) PETSCMALLOC( 2*size*sizeof(int) ); CHKPTRQ(nprocs);
28917699dbbSLois Curfman McInnes   PetscZero(nprocs,2*size*sizeof(int)); procs = nprocs + size;
29078b31e54SBarry Smith   owner = (int *) PETSCMALLOC((N+1)*sizeof(int)); CHKPTRQ(owner); /* see note*/
2911eb62cbbSBarry Smith   for ( i=0; i<N; i++ ) {
2921eb62cbbSBarry Smith     idx = rows[i];
2931eb62cbbSBarry Smith     found = 0;
29417699dbbSLois Curfman McInnes     for ( j=0; j<size; j++ ) {
2951eb62cbbSBarry Smith       if (idx >= owners[j] && idx < owners[j+1]) {
2961eb62cbbSBarry Smith         nprocs[j]++; procs[j] = 1; owner[i] = j; found = 1; break;
2971eb62cbbSBarry Smith       }
2981eb62cbbSBarry Smith     }
299bbb6d6a8SBarry Smith     if (!found) SETERRQ(1,"MatZeroRows_MPIAIJ:Index out of range");
3001eb62cbbSBarry Smith   }
30117699dbbSLois Curfman McInnes   nsends = 0;  for ( i=0; i<size; i++ ) { nsends += procs[i];}
3021eb62cbbSBarry Smith 
3031eb62cbbSBarry Smith   /* inform other processors of number of messages and max length*/
30417699dbbSLois Curfman McInnes   work = (int *) PETSCMALLOC( size*sizeof(int) ); CHKPTRQ(work);
30517699dbbSLois Curfman McInnes   MPI_Allreduce( procs, work,size,MPI_INT,MPI_SUM,comm);
30617699dbbSLois Curfman McInnes   nrecvs = work[rank];
30717699dbbSLois Curfman McInnes   MPI_Allreduce( nprocs, work,size,MPI_INT,MPI_MAX,comm);
30817699dbbSLois Curfman McInnes   nmax = work[rank];
30978b31e54SBarry Smith   PETSCFREE(work);
3101eb62cbbSBarry Smith 
3111eb62cbbSBarry Smith   /* post receives:   */
31278b31e54SBarry Smith   rvalues = (int *) PETSCMALLOC((nrecvs+1)*(nmax+1)*sizeof(int)); /*see note */
31378b31e54SBarry Smith   CHKPTRQ(rvalues);
31478b31e54SBarry Smith   recv_waits = (MPI_Request *) PETSCMALLOC((nrecvs+1)*sizeof(MPI_Request));
31578b31e54SBarry Smith   CHKPTRQ(recv_waits);
3161eb62cbbSBarry Smith   for ( i=0; i<nrecvs; i++ ) {
317416022c9SBarry Smith     MPI_Irecv(rvalues+nmax*i,nmax,MPI_INT,MPI_ANY_SOURCE,tag,comm,recv_waits+i);
3181eb62cbbSBarry Smith   }
3191eb62cbbSBarry Smith 
3201eb62cbbSBarry Smith   /* do sends:
3211eb62cbbSBarry Smith       1) starts[i] gives the starting index in svalues for stuff going to
3221eb62cbbSBarry Smith          the ith processor
3231eb62cbbSBarry Smith   */
32478b31e54SBarry Smith   svalues = (int *) PETSCMALLOC( (N+1)*sizeof(int) ); CHKPTRQ(svalues);
32578b31e54SBarry Smith   send_waits = (MPI_Request *) PETSCMALLOC( (nsends+1)*sizeof(MPI_Request));
32678b31e54SBarry Smith   CHKPTRQ(send_waits);
32717699dbbSLois Curfman McInnes   starts = (int *) PETSCMALLOC( (size+1)*sizeof(int) ); CHKPTRQ(starts);
3281eb62cbbSBarry Smith   starts[0] = 0;
32917699dbbSLois Curfman McInnes   for ( i=1; i<size; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
3301eb62cbbSBarry Smith   for ( i=0; i<N; i++ ) {
3311eb62cbbSBarry Smith     svalues[starts[owner[i]]++] = rows[i];
3321eb62cbbSBarry Smith   }
3331eb62cbbSBarry Smith   ISRestoreIndices(is,&rows);
3341eb62cbbSBarry Smith 
3351eb62cbbSBarry Smith   starts[0] = 0;
33617699dbbSLois Curfman McInnes   for ( i=1; i<size+1; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
3371eb62cbbSBarry Smith   count = 0;
33817699dbbSLois Curfman McInnes   for ( i=0; i<size; i++ ) {
3391eb62cbbSBarry Smith     if (procs[i]) {
340416022c9SBarry Smith       MPI_Isend(svalues+starts[i],nprocs[i],MPI_INT,i,tag,comm,send_waits+count++);
3411eb62cbbSBarry Smith     }
3421eb62cbbSBarry Smith   }
34378b31e54SBarry Smith   PETSCFREE(starts);
3441eb62cbbSBarry Smith 
34517699dbbSLois Curfman McInnes   base = owners[rank];
3461eb62cbbSBarry Smith 
3471eb62cbbSBarry Smith   /*  wait on receives */
34878b31e54SBarry Smith   lens   = (int *) PETSCMALLOC( 2*(nrecvs+1)*sizeof(int) ); CHKPTRQ(lens);
3491eb62cbbSBarry Smith   source = lens + nrecvs;
3501eb62cbbSBarry Smith   count  = nrecvs; slen = 0;
3511eb62cbbSBarry Smith   while (count) {
352d6dfbf8fSBarry Smith     MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);
3531eb62cbbSBarry Smith     /* unpack receives into our local space */
3541eb62cbbSBarry Smith     MPI_Get_count(&recv_status,MPI_INT,&n);
355d6dfbf8fSBarry Smith     source[imdex]  = recv_status.MPI_SOURCE;
356d6dfbf8fSBarry Smith     lens[imdex]  = n;
3571eb62cbbSBarry Smith     slen += n;
3581eb62cbbSBarry Smith     count--;
3591eb62cbbSBarry Smith   }
36078b31e54SBarry Smith   PETSCFREE(recv_waits);
3611eb62cbbSBarry Smith 
3621eb62cbbSBarry Smith   /* move the data into the send scatter */
36378b31e54SBarry Smith   lrows = (int *) PETSCMALLOC( (slen+1)*sizeof(int) ); CHKPTRQ(lrows);
3641eb62cbbSBarry Smith   count = 0;
3651eb62cbbSBarry Smith   for ( i=0; i<nrecvs; i++ ) {
3661eb62cbbSBarry Smith     values = rvalues + i*nmax;
3671eb62cbbSBarry Smith     for ( j=0; j<lens[i]; j++ ) {
3681eb62cbbSBarry Smith       lrows[count++] = values[j] - base;
3691eb62cbbSBarry Smith     }
3701eb62cbbSBarry Smith   }
37178b31e54SBarry Smith   PETSCFREE(rvalues); PETSCFREE(lens);
37278b31e54SBarry Smith   PETSCFREE(owner); PETSCFREE(nprocs);
3731eb62cbbSBarry Smith 
3741eb62cbbSBarry Smith   /* actually zap the local rows */
375416022c9SBarry Smith   ierr = ISCreateSeq(MPI_COMM_SELF,slen,lrows,&istmp);CHKERRQ(ierr);
376464493b3SBarry Smith   PLogObjectParent(A,istmp);
377416022c9SBarry Smith   PETSCFREE(lrows);
37878b31e54SBarry Smith   ierr = MatZeroRows(l->A,istmp,diag); CHKERRQ(ierr);
37978b31e54SBarry Smith   ierr = MatZeroRows(l->B,istmp,0); CHKERRQ(ierr);
38078b31e54SBarry Smith   ierr = ISDestroy(istmp); CHKERRQ(ierr);
3811eb62cbbSBarry Smith 
3821eb62cbbSBarry Smith   /* wait on sends */
3831eb62cbbSBarry Smith   if (nsends) {
38478b31e54SBarry Smith     send_status = (MPI_Status *) PETSCMALLOC(nsends*sizeof(MPI_Status));
38578b31e54SBarry Smith     CHKPTRQ(send_status);
3861eb62cbbSBarry Smith     MPI_Waitall(nsends,send_waits,send_status);
38778b31e54SBarry Smith     PETSCFREE(send_status);
3881eb62cbbSBarry Smith   }
38978b31e54SBarry Smith   PETSCFREE(send_waits); PETSCFREE(svalues);
3901eb62cbbSBarry Smith 
3911eb62cbbSBarry Smith   return 0;
3921eb62cbbSBarry Smith }
3931eb62cbbSBarry Smith 
394416022c9SBarry Smith static int MatMult_MPIAIJ(Mat A,Vec xx,Vec yy)
3951eb62cbbSBarry Smith {
396416022c9SBarry Smith   Mat_MPIAIJ *a = (Mat_MPIAIJ *) A->data;
3971eb62cbbSBarry Smith   int        ierr;
398416022c9SBarry Smith 
39948d91487SBarry Smith   if (!a->assembled) SETERRQ(1,"MatMult_MPIAIJ:must assemble matrix");
40064119d58SLois Curfman McInnes   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_ALL,a->Mvctx);CHKERRQ(ierr);
401416022c9SBarry Smith   ierr = MatMult(a->A,xx,yy); CHKERRQ(ierr);
40264119d58SLois Curfman McInnes   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_ALL,a->Mvctx);CHKERRQ(ierr);
403416022c9SBarry Smith   ierr = MatMultAdd(a->B,a->lvec,yy,yy); CHKERRQ(ierr);
4041eb62cbbSBarry Smith   return 0;
4051eb62cbbSBarry Smith }
4061eb62cbbSBarry Smith 
407416022c9SBarry Smith static int MatMultAdd_MPIAIJ(Mat A,Vec xx,Vec yy,Vec zz)
408da3a660dSBarry Smith {
409416022c9SBarry Smith   Mat_MPIAIJ *a = (Mat_MPIAIJ *) A->data;
410da3a660dSBarry Smith   int        ierr;
41148d91487SBarry Smith   if (!a->assembled) SETERRQ(1,"MatMult_MPIAIJ:must assemble matrix");
41264119d58SLois Curfman McInnes   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_ALL,a->Mvctx);CHKERRQ(ierr);
413416022c9SBarry Smith   ierr = MatMultAdd(a->A,xx,yy,zz); CHKERRQ(ierr);
41464119d58SLois Curfman McInnes   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_ALL,a->Mvctx);CHKERRQ(ierr);
415416022c9SBarry Smith   ierr = MatMultAdd(a->B,a->lvec,zz,zz); CHKERRQ(ierr);
416da3a660dSBarry Smith   return 0;
417da3a660dSBarry Smith }
418da3a660dSBarry Smith 
419416022c9SBarry Smith static int MatMultTrans_MPIAIJ(Mat A,Vec xx,Vec yy)
420da3a660dSBarry Smith {
421416022c9SBarry Smith   Mat_MPIAIJ *a = (Mat_MPIAIJ *) A->data;
422da3a660dSBarry Smith   int        ierr;
423da3a660dSBarry Smith 
42448d91487SBarry Smith   if (!a->assembled) SETERRQ(1,"MatMulTrans_MPIAIJ:must assemble matrix");
425da3a660dSBarry Smith   /* do nondiagonal part */
426416022c9SBarry Smith   ierr = MatMultTrans(a->B,xx,a->lvec); CHKERRQ(ierr);
427da3a660dSBarry Smith   /* send it on its way */
428416022c9SBarry Smith   ierr = VecScatterBegin(a->lvec,yy,ADD_VALUES,
42964119d58SLois Curfman McInnes                 (ScatterMode)(SCATTER_ALL|SCATTER_REVERSE),a->Mvctx); CHKERRQ(ierr);
430da3a660dSBarry Smith   /* do local part */
431416022c9SBarry Smith   ierr = MatMultTrans(a->A,xx,yy); CHKERRQ(ierr);
432da3a660dSBarry Smith   /* receive remote parts: note this assumes the values are not actually */
433da3a660dSBarry Smith   /* inserted in yy until the next line, which is true for my implementation*/
434da3a660dSBarry Smith   /* but is not perhaps always true. */
435416022c9SBarry Smith   ierr = VecScatterEnd(a->lvec,yy,ADD_VALUES,
43664119d58SLois Curfman McInnes                   (ScatterMode)(SCATTER_ALL|SCATTER_REVERSE),a->Mvctx); CHKERRQ(ierr);
437da3a660dSBarry Smith   return 0;
438da3a660dSBarry Smith }
439da3a660dSBarry Smith 
440416022c9SBarry Smith static int MatMultTransAdd_MPIAIJ(Mat A,Vec xx,Vec yy,Vec zz)
441da3a660dSBarry Smith {
442416022c9SBarry Smith   Mat_MPIAIJ *a = (Mat_MPIAIJ *) A->data;
443da3a660dSBarry Smith   int        ierr;
444da3a660dSBarry Smith 
44548d91487SBarry Smith   if (!a->assembled) SETERRQ(1,"MatMulTransAdd_MPIAIJ:must assemble matrix");
446da3a660dSBarry Smith   /* do nondiagonal part */
447416022c9SBarry Smith   ierr = MatMultTrans(a->B,xx,a->lvec); CHKERRQ(ierr);
448da3a660dSBarry Smith   /* send it on its way */
449416022c9SBarry Smith   ierr = VecScatterBegin(a->lvec,zz,ADD_VALUES,
45064119d58SLois Curfman McInnes                  (ScatterMode)(SCATTER_ALL|SCATTER_REVERSE),a->Mvctx); CHKERRQ(ierr);
451da3a660dSBarry Smith   /* do local part */
452416022c9SBarry Smith   ierr = MatMultTransAdd(a->A,xx,yy,zz); CHKERRQ(ierr);
453da3a660dSBarry Smith   /* receive remote parts: note this assumes the values are not actually */
454da3a660dSBarry Smith   /* inserted in yy until the next line, which is true for my implementation*/
455da3a660dSBarry Smith   /* but is not perhaps always true. */
456416022c9SBarry Smith   ierr = VecScatterEnd(a->lvec,zz,ADD_VALUES,
45764119d58SLois Curfman McInnes                   (ScatterMode)(SCATTER_ALL|SCATTER_REVERSE),a->Mvctx); CHKERRQ(ierr);
458da3a660dSBarry Smith   return 0;
459da3a660dSBarry Smith }
460da3a660dSBarry Smith 
4611eb62cbbSBarry Smith /*
4621eb62cbbSBarry Smith   This only works correctly for square matrices where the subblock A->A is the
4631eb62cbbSBarry Smith    diagonal block
4641eb62cbbSBarry Smith */
465416022c9SBarry Smith static int MatGetDiagonal_MPIAIJ(Mat A,Vec v)
4661eb62cbbSBarry Smith {
467416022c9SBarry Smith   Mat_MPIAIJ *a = (Mat_MPIAIJ *) A->data;
46848d91487SBarry Smith   if (!a->assembled) SETERRQ(1,"MatGetDiag_MPIAIJ:must assemble matrix");
469416022c9SBarry Smith   return MatGetDiagonal(a->A,v);
4701eb62cbbSBarry Smith }
4711eb62cbbSBarry Smith 
47244a69424SLois Curfman McInnes static int MatDestroy_MPIAIJ(PetscObject obj)
4731eb62cbbSBarry Smith {
4741eb62cbbSBarry Smith   Mat        mat = (Mat) obj;
47544a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
4761eb62cbbSBarry Smith   int        ierr;
477a5a9c739SBarry Smith #if defined(PETSC_LOG)
4786e35fa57SLois Curfman McInnes   PLogObjectState(obj,"Rows=%d, Cols=%d",aij->M,aij->N);
479a5a9c739SBarry Smith #endif
48078b31e54SBarry Smith   PETSCFREE(aij->rowners);
48178b31e54SBarry Smith   ierr = MatDestroy(aij->A); CHKERRQ(ierr);
48278b31e54SBarry Smith   ierr = MatDestroy(aij->B); CHKERRQ(ierr);
48378b31e54SBarry Smith   if (aij->colmap) PETSCFREE(aij->colmap);
48478b31e54SBarry Smith   if (aij->garray) PETSCFREE(aij->garray);
4851eb62cbbSBarry Smith   if (aij->lvec)   VecDestroy(aij->lvec);
486*a56f8943SBarry Smith   if (aij->Mvctx)  VecScatterDestroy(aij->Mvctx);
48778b31e54SBarry Smith   PETSCFREE(aij);
488a5a9c739SBarry Smith   PLogObjectDestroy(mat);
489a5a9c739SBarry Smith   PETSCHEADERDESTROY(mat);
4901eb62cbbSBarry Smith   return 0;
4911eb62cbbSBarry Smith }
4927857610eSBarry Smith #include "draw.h"
493b16a3bb1SBarry Smith #include "pinclude/pviewer.h"
494ee50ffe9SBarry Smith 
495416022c9SBarry Smith static int MatView_MPIAIJ_Binary(Mat mat,Viewer viewer)
4961eb62cbbSBarry Smith {
497416022c9SBarry Smith   Mat_MPIAIJ  *aij = (Mat_MPIAIJ *) mat->data;
498416022c9SBarry Smith   int         ierr;
499416022c9SBarry Smith 
50017699dbbSLois Curfman McInnes   if (aij->size == 1) {
501416022c9SBarry Smith     ierr = MatView(aij->A,viewer); CHKERRQ(ierr);
502416022c9SBarry Smith   }
503a523beb4SLois Curfman McInnes   else SETERRQ(1,"MatView_MPIAIJ_Binary:Only uniprocessor output supported");
504416022c9SBarry Smith   return 0;
505416022c9SBarry Smith }
506416022c9SBarry Smith 
507416022c9SBarry Smith static int MatView_MPIAIJ_ASCIIorDraw(Mat mat,Viewer viewer)
508416022c9SBarry Smith {
50944a69424SLois Curfman McInnes   Mat_MPIAIJ  *aij = (Mat_MPIAIJ *) mat->data;
510dbb450caSBarry Smith   Mat_SeqAIJ* C = (Mat_SeqAIJ*)aij->A->data;
511*a56f8943SBarry Smith   int         ierr, format,shift = C->indexshift,rank;
512d13ab20cSBarry Smith   PetscObject vobj = (PetscObject) viewer;
513d636dbe3SBarry Smith   FILE        *fd;
514416022c9SBarry Smith 
515416022c9SBarry Smith   if (vobj->type == ASCII_FILE_VIEWER || vobj->type == ASCII_FILES_VIEWER) {
516416022c9SBarry Smith     ierr = ViewerFileGetFormat_Private(viewer,&format);
517416022c9SBarry Smith     if (format == FILE_FORMAT_INFO) {
518*a56f8943SBarry Smith       int nz,nzalloc,mem;
519*a56f8943SBarry Smith       MPI_Comm_rank(mat->comm,&rank);
520*a56f8943SBarry Smith       ierr = ViewerFileGetPointer_Private(viewer,&fd); CHKERRQ(ierr);
521*a56f8943SBarry Smith       ierr = MatGetInfo(mat,MAT_LOCAL,&nz,&nzalloc,&mem);
522*a56f8943SBarry Smith       MPIU_Seq_begin(mat->comm,1);
523*a56f8943SBarry Smith         fprintf(fd,"[%d] Local rows %d nz %d nz alloced %d mem %d \n",rank,aij->m,nz,
524*a56f8943SBarry Smith                 nzalloc,mem);
525*a56f8943SBarry Smith       fflush(fd);
526*a56f8943SBarry Smith       MPIU_Seq_end(mat->comm,1);
527*a56f8943SBarry Smith       ierr = VecScatterView(aij->Mvctx,viewer);
528416022c9SBarry Smith       return 0;
529416022c9SBarry Smith     }
530416022c9SBarry Smith   }
531416022c9SBarry Smith 
532416022c9SBarry Smith   if (vobj->type == ASCII_FILE_VIEWER) {
533d636dbe3SBarry Smith     ierr = ViewerFileGetPointer_Private(viewer,&fd); CHKERRQ(ierr);
5347f813858SBarry Smith     MPIU_Seq_begin(mat->comm,1);
535d13ab20cSBarry Smith     fprintf(fd,"[%d] rows %d starts %d ends %d cols %d starts %d ends %d\n",
53617699dbbSLois Curfman McInnes            aij->rank,aij->m,aij->rstart,aij->rend,aij->n,aij->cstart,
5371eb62cbbSBarry Smith            aij->cend);
53878b31e54SBarry Smith     ierr = MatView(aij->A,viewer); CHKERRQ(ierr);
53978b31e54SBarry Smith     ierr = MatView(aij->B,viewer); CHKERRQ(ierr);
540d13ab20cSBarry Smith     fflush(fd);
5417f813858SBarry Smith     MPIU_Seq_end(mat->comm,1);
542d13ab20cSBarry Smith   }
543416022c9SBarry Smith   else {
544*a56f8943SBarry Smith     int size = aij->size;
545*a56f8943SBarry Smith     rank = aij->rank;
54617699dbbSLois Curfman McInnes     if (size == 1) {
54778b31e54SBarry Smith       ierr = MatView(aij->A,viewer); CHKERRQ(ierr);
54895373324SBarry Smith     }
54995373324SBarry Smith     else {
55095373324SBarry Smith       /* assemble the entire matrix onto first processor. */
55195373324SBarry Smith       Mat         A;
552ec8511deSBarry Smith       Mat_SeqAIJ *Aloc;
5532eb8c8abSBarry Smith       int         M = aij->M, N = aij->N,m,*ai,*aj,row,*cols,i,*ct;
55495373324SBarry Smith       Scalar      *a;
5552ee70a88SLois Curfman McInnes 
55617699dbbSLois Curfman McInnes       if (!rank) {
557416022c9SBarry Smith         ierr = MatCreateMPIAIJ(mat->comm,M,N,M,N,0,0,0,0,&A);CHKERRQ(ierr);
55895373324SBarry Smith       }
55995373324SBarry Smith       else {
560416022c9SBarry Smith         ierr = MatCreateMPIAIJ(mat->comm,0,0,M,N,0,0,0,0,&A);CHKERRQ(ierr);
56195373324SBarry Smith       }
562464493b3SBarry Smith       PLogObjectParent(mat,A);
563416022c9SBarry Smith 
56495373324SBarry Smith 
56595373324SBarry Smith       /* copy over the A part */
566ec8511deSBarry Smith       Aloc = (Mat_SeqAIJ*) aij->A->data;
5672ee70a88SLois Curfman McInnes       m = Aloc->m; ai = Aloc->i; aj = Aloc->j; a = Aloc->a;
56895373324SBarry Smith       row = aij->rstart;
569dbb450caSBarry Smith       for ( i=0; i<ai[m]+shift; i++ ) {aj[i] += aij->cstart + shift;}
57095373324SBarry Smith       for ( i=0; i<m; i++ ) {
571416022c9SBarry Smith         ierr = MatSetValues(A,1,&row,ai[i+1]-ai[i],aj,a,INSERT_VALUES);CHKERRQ(ierr);
57295373324SBarry Smith         row++; a += ai[i+1]-ai[i]; aj += ai[i+1]-ai[i];
57395373324SBarry Smith       }
5742ee70a88SLois Curfman McInnes       aj = Aloc->j;
575dbb450caSBarry Smith       for ( i=0; i<ai[m]+shift; i++ ) {aj[i] -= aij->cstart + shift;}
57695373324SBarry Smith 
57795373324SBarry Smith       /* copy over the B part */
578ec8511deSBarry Smith       Aloc = (Mat_SeqAIJ*) aij->B->data;
5792ee70a88SLois Curfman McInnes       m = Aloc->m;  ai = Aloc->i; aj = Aloc->j; a = Aloc->a;
58095373324SBarry Smith       row = aij->rstart;
58178b31e54SBarry Smith       ct = cols = (int *) PETSCMALLOC( (ai[m]+1)*sizeof(int) ); CHKPTRQ(cols);
582dbb450caSBarry Smith       for ( i=0; i<ai[m]+shift; i++ ) {cols[i] = aij->garray[aj[i]+shift];}
58395373324SBarry Smith       for ( i=0; i<m; i++ ) {
584416022c9SBarry Smith         ierr = MatSetValues(A,1,&row,ai[i+1]-ai[i],cols,a,INSERT_VALUES);CHKERRQ(ierr);
58595373324SBarry Smith         row++; a += ai[i+1]-ai[i]; cols += ai[i+1]-ai[i];
58695373324SBarry Smith       }
58778b31e54SBarry Smith       PETSCFREE(ct);
58878b31e54SBarry Smith       ierr = MatAssemblyBegin(A,FINAL_ASSEMBLY); CHKERRQ(ierr);
58978b31e54SBarry Smith       ierr = MatAssemblyEnd(A,FINAL_ASSEMBLY); CHKERRQ(ierr);
59017699dbbSLois Curfman McInnes       if (!rank) {
59178b31e54SBarry Smith         ierr = MatView(((Mat_MPIAIJ*)(A->data))->A,viewer); CHKERRQ(ierr);
59295373324SBarry Smith       }
59378b31e54SBarry Smith       ierr = MatDestroy(A); CHKERRQ(ierr);
59495373324SBarry Smith     }
59595373324SBarry Smith   }
5961eb62cbbSBarry Smith   return 0;
5971eb62cbbSBarry Smith }
5981eb62cbbSBarry Smith 
599416022c9SBarry Smith static int MatView_MPIAIJ(PetscObject obj,Viewer viewer)
600416022c9SBarry Smith {
601416022c9SBarry Smith   Mat         mat = (Mat) obj;
602416022c9SBarry Smith   Mat_MPIAIJ  *aij = (Mat_MPIAIJ *) mat->data;
603416022c9SBarry Smith   int         ierr;
604416022c9SBarry Smith   PetscObject vobj = (PetscObject) viewer;
605416022c9SBarry Smith 
60648d91487SBarry Smith   if (!aij->assembled) SETERRQ(1,"MatView_MPIAIJ:must assemble matrix");
607416022c9SBarry Smith   if (!viewer) {
608416022c9SBarry Smith     viewer = STDOUT_VIEWER_SELF; vobj = (PetscObject) viewer;
609416022c9SBarry Smith   }
610416022c9SBarry Smith   if (vobj->cookie == DRAW_COOKIE && vobj->type == NULLWINDOW) return 0;
611416022c9SBarry Smith   else if (vobj->cookie == VIEWER_COOKIE && vobj->type == ASCII_FILE_VIEWER) {
612416022c9SBarry Smith     ierr = MatView_MPIAIJ_ASCIIorDraw(mat,viewer); CHKERRQ(ierr);
613416022c9SBarry Smith   }
614416022c9SBarry Smith   else if (vobj->cookie == VIEWER_COOKIE && vobj->type == ASCII_FILES_VIEWER) {
615416022c9SBarry Smith     ierr = MatView_MPIAIJ_ASCIIorDraw(mat,viewer); CHKERRQ(ierr);
616416022c9SBarry Smith   }
617416022c9SBarry Smith   else if (vobj->cookie == DRAW_COOKIE) {
618416022c9SBarry Smith     ierr = MatView_MPIAIJ_ASCIIorDraw(mat,viewer); CHKERRQ(ierr);
619416022c9SBarry Smith   }
620416022c9SBarry Smith   else if (vobj->type == BINARY_FILE_VIEWER) {
621416022c9SBarry Smith     return MatView_MPIAIJ_Binary(mat,viewer);
622416022c9SBarry Smith   }
623416022c9SBarry Smith   return 0;
624416022c9SBarry Smith }
625416022c9SBarry Smith 
626ec8511deSBarry Smith extern int MatMarkDiag_SeqAIJ(Mat);
6271eb62cbbSBarry Smith /*
6281eb62cbbSBarry Smith     This has to provide several versions.
6291eb62cbbSBarry Smith 
6301eb62cbbSBarry Smith      1) per sequential
6311eb62cbbSBarry Smith      2) a) use only local smoothing updating outer values only once.
6321eb62cbbSBarry Smith         b) local smoothing updating outer values each inner iteration
633d6dfbf8fSBarry Smith      3) color updating out values betwen colors.
6341eb62cbbSBarry Smith */
635fc76ce87SLois Curfman McInnes static int MatRelax_MPIAIJ(Mat matin,Vec bb,double omega,MatSORType flag,
636dbb450caSBarry Smith                            double fshift,int its,Vec xx)
6378a729477SBarry Smith {
63844a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
639d6dfbf8fSBarry Smith   Mat        AA = mat->A, BB = mat->B;
640ec8511deSBarry Smith   Mat_SeqAIJ *A = (Mat_SeqAIJ *) AA->data, *B = (Mat_SeqAIJ *)BB->data;
6416abc6512SBarry Smith   Scalar     zero = 0.0,*b,*x,*xs,*ls,d,*v,sum,scale,*t,*ts;
6426abc6512SBarry Smith   int        ierr,*idx, *diag;
643416022c9SBarry Smith   int        n = mat->n, m = mat->m, i,shift = A->indexshift;
644da3a660dSBarry Smith   Vec        tt;
6458a729477SBarry Smith 
64648d91487SBarry Smith   if (!mat->assembled) SETERRQ(1,"MatRelax_MPIAIJ:must assemble matrix");
6471eb62cbbSBarry Smith 
648d6dfbf8fSBarry Smith   VecGetArray(xx,&x); VecGetArray(bb,&b); VecGetArray(mat->lvec,&ls);
649dbb450caSBarry Smith   xs = x + shift; /* shift by one for index start of 1 */
650dbb450caSBarry Smith   ls = ls + shift;
651ec8511deSBarry Smith   if (!A->diag) {if ((ierr = MatMarkDiag_SeqAIJ(AA))) return ierr;}
652d6dfbf8fSBarry Smith   diag = A->diag;
653acb40c82SBarry Smith   if (flag == SOR_APPLY_UPPER || flag == SOR_APPLY_LOWER) {
65448d91487SBarry Smith     SETERRQ(1,"MatRelax_MPIAIJ:Option not supported");
655acb40c82SBarry Smith   }
656da3a660dSBarry Smith   if (flag & SOR_EISENSTAT) {
657da3a660dSBarry Smith     /* Let  A = L + U + D; where L is lower trianglar,
658da3a660dSBarry Smith     U is upper triangular, E is diagonal; This routine applies
659da3a660dSBarry Smith 
660da3a660dSBarry Smith             (L + E)^{-1} A (U + E)^{-1}
661da3a660dSBarry Smith 
662da3a660dSBarry Smith     to a vector efficiently using Eisenstat's trick. This is for
663da3a660dSBarry Smith     the case of SSOR preconditioner, so E is D/omega where omega
664da3a660dSBarry Smith     is the relaxation factor.
665da3a660dSBarry Smith     */
66678b31e54SBarry Smith     ierr = VecDuplicate(xx,&tt); CHKERRQ(ierr);
667464493b3SBarry Smith     PLogObjectParent(matin,tt);
668da3a660dSBarry Smith     VecGetArray(tt,&t);
669da3a660dSBarry Smith     scale = (2.0/omega) - 1.0;
670da3a660dSBarry Smith     /*  x = (E + U)^{-1} b */
671da3a660dSBarry Smith     VecSet(&zero,mat->lvec);
67264119d58SLois Curfman McInnes     ierr = VecPipelineBegin(xx,mat->lvec,INSERT_VALUES,PIPELINE_UP,
67378b31e54SBarry Smith                               mat->Mvctx); CHKERRQ(ierr);
674da3a660dSBarry Smith     for ( i=m-1; i>-1; i-- ) {
675da3a660dSBarry Smith       n    = A->i[i+1] - diag[i] - 1;
676dbb450caSBarry Smith       idx  = A->j + diag[i] + !shift;
677dbb450caSBarry Smith       v    = A->a + diag[i] + !shift;
678da3a660dSBarry Smith       sum  = b[i];
679da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,xs,v,idx,n);
680dbb450caSBarry Smith       d    = fshift + A->a[diag[i]+shift];
681da3a660dSBarry Smith       n    = B->i[i+1] - B->i[i];
682dbb450caSBarry Smith       idx  = B->j + B->i[i] + shift;
683dbb450caSBarry Smith       v    = B->a + B->i[i] + shift;
684da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,ls,v,idx,n);
685da3a660dSBarry Smith       x[i] = omega*(sum/d);
686da3a660dSBarry Smith     }
68764119d58SLois Curfman McInnes     ierr = VecPipelineEnd(xx,mat->lvec,INSERT_VALUES,PIPELINE_UP,
68878b31e54SBarry Smith                             mat->Mvctx); CHKERRQ(ierr);
689da3a660dSBarry Smith 
690da3a660dSBarry Smith     /*  t = b - (2*E - D)x */
691da3a660dSBarry Smith     v = A->a;
692dbb450caSBarry Smith     for ( i=0; i<m; i++ ) { t[i] = b[i] - scale*(v[*diag++ + shift])*x[i]; }
693da3a660dSBarry Smith 
694da3a660dSBarry Smith     /*  t = (E + L)^{-1}t */
695dbb450caSBarry Smith     ts = t + shift; /* shifted by one for index start of a or mat->j*/
696da3a660dSBarry Smith     diag = A->diag;
697da3a660dSBarry Smith     VecSet(&zero,mat->lvec);
69864119d58SLois Curfman McInnes     ierr = VecPipelineBegin(tt,mat->lvec,INSERT_VALUES,PIPELINE_DOWN,
69978b31e54SBarry Smith                                                  mat->Mvctx); CHKERRQ(ierr);
700da3a660dSBarry Smith     for ( i=0; i<m; i++ ) {
701da3a660dSBarry Smith       n    = diag[i] - A->i[i];
702dbb450caSBarry Smith       idx  = A->j + A->i[i] + shift;
703dbb450caSBarry Smith       v    = A->a + A->i[i] + shift;
704da3a660dSBarry Smith       sum  = t[i];
705da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,ts,v,idx,n);
706dbb450caSBarry Smith       d    = fshift + A->a[diag[i]+shift];
707da3a660dSBarry Smith       n    = B->i[i+1] - B->i[i];
708dbb450caSBarry Smith       idx  = B->j + B->i[i] + shift;
709dbb450caSBarry Smith       v    = B->a + B->i[i] + shift;
710da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,ls,v,idx,n);
711da3a660dSBarry Smith       t[i] = omega*(sum/d);
712da3a660dSBarry Smith     }
71364119d58SLois Curfman McInnes     ierr = VecPipelineEnd(tt,mat->lvec,INSERT_VALUES,PIPELINE_DOWN,
71478b31e54SBarry Smith                                                     mat->Mvctx); CHKERRQ(ierr);
715da3a660dSBarry Smith     /*  x = x + t */
716da3a660dSBarry Smith     for ( i=0; i<m; i++ ) { x[i] += t[i]; }
717da3a660dSBarry Smith     VecDestroy(tt);
718da3a660dSBarry Smith     return 0;
719da3a660dSBarry Smith   }
720da3a660dSBarry Smith 
7211eb62cbbSBarry Smith 
722d6dfbf8fSBarry Smith   if ((flag & SOR_SYMMETRIC_SWEEP) == SOR_SYMMETRIC_SWEEP){
723da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
724da3a660dSBarry Smith       VecSet(&zero,mat->lvec); VecSet(&zero,xx);
725da3a660dSBarry Smith     }
726da3a660dSBarry Smith     else {
72764119d58SLois Curfman McInnes       ierr=VecScatterBegin(xx,mat->lvec,INSERT_VALUES,SCATTER_UP,mat->Mvctx);
72878b31e54SBarry Smith       CHKERRQ(ierr);
72964119d58SLois Curfman McInnes       ierr = VecScatterEnd(xx,mat->lvec,INSERT_VALUES,SCATTER_UP,mat->Mvctx);
73078b31e54SBarry Smith       CHKERRQ(ierr);
731da3a660dSBarry Smith     }
732d6dfbf8fSBarry Smith     while (its--) {
733d6dfbf8fSBarry Smith       /* go down through the rows */
73464119d58SLois Curfman McInnes       ierr = VecPipelineBegin(xx,mat->lvec,INSERT_VALUES,PIPELINE_DOWN,
73578b31e54SBarry Smith                               mat->Mvctx); CHKERRQ(ierr);
736d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
737d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
738dbb450caSBarry Smith         idx  = A->j + A->i[i] + shift;
739dbb450caSBarry Smith         v    = A->a + A->i[i] + shift;
740d6dfbf8fSBarry Smith         sum  = b[i];
741d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
742dbb450caSBarry Smith         d    = fshift + A->a[diag[i]+shift];
743d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
744dbb450caSBarry Smith         idx  = B->j + B->i[i] + shift;
745dbb450caSBarry Smith         v    = B->a + B->i[i] + shift;
746d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
747d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
748d6dfbf8fSBarry Smith       }
74964119d58SLois Curfman McInnes       ierr = VecPipelineEnd(xx,mat->lvec,INSERT_VALUES,PIPELINE_DOWN,
75078b31e54SBarry Smith                             mat->Mvctx); CHKERRQ(ierr);
751d6dfbf8fSBarry Smith       /* come up through the rows */
75264119d58SLois Curfman McInnes       ierr = VecPipelineBegin(xx,mat->lvec,INSERT_VALUES,PIPELINE_UP,
75378b31e54SBarry Smith                               mat->Mvctx); CHKERRQ(ierr);
754d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
755d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
756dbb450caSBarry Smith         idx  = A->j + A->i[i] + shift;
757dbb450caSBarry Smith         v    = A->a + A->i[i] + shift;
758d6dfbf8fSBarry Smith         sum  = b[i];
759d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
760dbb450caSBarry Smith         d    = fshift + A->a[diag[i]+shift];
761d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
762dbb450caSBarry Smith         idx  = B->j + B->i[i] + shift;
763dbb450caSBarry Smith         v    = B->a + B->i[i] + shift;
764d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
765d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
766d6dfbf8fSBarry Smith       }
76764119d58SLois Curfman McInnes       ierr = VecPipelineEnd(xx,mat->lvec,INSERT_VALUES,PIPELINE_UP,
76878b31e54SBarry Smith                             mat->Mvctx); CHKERRQ(ierr);
769d6dfbf8fSBarry Smith     }
770d6dfbf8fSBarry Smith   }
771d6dfbf8fSBarry Smith   else if (flag & SOR_FORWARD_SWEEP){
772da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
773da3a660dSBarry Smith       VecSet(&zero,mat->lvec);
77464119d58SLois Curfman McInnes       ierr = VecPipelineBegin(xx,mat->lvec,INSERT_VALUES,PIPELINE_DOWN,
77578b31e54SBarry Smith                               mat->Mvctx); CHKERRQ(ierr);
776da3a660dSBarry Smith       for ( i=0; i<m; i++ ) {
777da3a660dSBarry Smith         n    = diag[i] - A->i[i];
778dbb450caSBarry Smith         idx  = A->j + A->i[i] + shift;
779dbb450caSBarry Smith         v    = A->a + A->i[i] + shift;
780da3a660dSBarry Smith         sum  = b[i];
781da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
782dbb450caSBarry Smith         d    = fshift + A->a[diag[i]+shift];
783da3a660dSBarry Smith         n    = B->i[i+1] - B->i[i];
784dbb450caSBarry Smith         idx  = B->j + B->i[i] + shift;
785dbb450caSBarry Smith         v    = B->a + B->i[i] + shift;
786da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
787da3a660dSBarry Smith         x[i] = omega*(sum/d);
788da3a660dSBarry Smith       }
78964119d58SLois Curfman McInnes       ierr = VecPipelineEnd(xx,mat->lvec,INSERT_VALUES,PIPELINE_DOWN,
79078b31e54SBarry Smith                             mat->Mvctx); CHKERRQ(ierr);
791da3a660dSBarry Smith       its--;
792da3a660dSBarry Smith     }
793d6dfbf8fSBarry Smith     while (its--) {
79464119d58SLois Curfman McInnes       ierr=VecScatterBegin(xx,mat->lvec,INSERT_VALUES,SCATTER_UP,mat->Mvctx);
79578b31e54SBarry Smith       CHKERRQ(ierr);
79664119d58SLois Curfman McInnes       ierr = VecScatterEnd(xx,mat->lvec,INSERT_VALUES,SCATTER_UP,mat->Mvctx);
79778b31e54SBarry Smith       CHKERRQ(ierr);
79864119d58SLois Curfman McInnes       ierr = VecPipelineBegin(xx,mat->lvec,INSERT_VALUES,PIPELINE_DOWN,
79978b31e54SBarry Smith                               mat->Mvctx); CHKERRQ(ierr);
800d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
801d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
802dbb450caSBarry Smith         idx  = A->j + A->i[i] + shift;
803dbb450caSBarry Smith         v    = A->a + A->i[i] + shift;
804d6dfbf8fSBarry Smith         sum  = b[i];
805d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
806dbb450caSBarry Smith         d    = fshift + A->a[diag[i]+shift];
807d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
808dbb450caSBarry Smith         idx  = B->j + B->i[i] + shift;
809dbb450caSBarry Smith         v    = B->a + B->i[i] + shift;
810d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
811d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
812d6dfbf8fSBarry Smith       }
81364119d58SLois Curfman McInnes       ierr = VecPipelineEnd(xx,mat->lvec,INSERT_VALUES,PIPELINE_DOWN,
81478b31e54SBarry Smith                             mat->Mvctx); CHKERRQ(ierr);
815d6dfbf8fSBarry Smith     }
816d6dfbf8fSBarry Smith   }
817d6dfbf8fSBarry Smith   else if (flag & SOR_BACKWARD_SWEEP){
818da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
819da3a660dSBarry Smith       VecSet(&zero,mat->lvec);
82064119d58SLois Curfman McInnes       ierr = VecPipelineBegin(xx,mat->lvec,INSERT_VALUES,PIPELINE_UP,
82178b31e54SBarry Smith                               mat->Mvctx); CHKERRQ(ierr);
822da3a660dSBarry Smith       for ( i=m-1; i>-1; i-- ) {
823da3a660dSBarry Smith         n    = A->i[i+1] - diag[i] - 1;
824dbb450caSBarry Smith         idx  = A->j + diag[i] + !shift;
825dbb450caSBarry Smith         v    = A->a + diag[i] + !shift;
826da3a660dSBarry Smith         sum  = b[i];
827da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
828dbb450caSBarry Smith         d    = fshift + A->a[diag[i]+shift];
829da3a660dSBarry Smith         n    = B->i[i+1] - B->i[i];
830dbb450caSBarry Smith         idx  = B->j + B->i[i] + shift;
831dbb450caSBarry Smith         v    = B->a + B->i[i] + shift;
832da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
833da3a660dSBarry Smith         x[i] = omega*(sum/d);
834da3a660dSBarry Smith       }
83564119d58SLois Curfman McInnes       ierr = VecPipelineEnd(xx,mat->lvec,INSERT_VALUES,PIPELINE_UP,
83678b31e54SBarry Smith                             mat->Mvctx); CHKERRQ(ierr);
837da3a660dSBarry Smith       its--;
838da3a660dSBarry Smith     }
839d6dfbf8fSBarry Smith     while (its--) {
84064119d58SLois Curfman McInnes       ierr = VecScatterBegin(xx,mat->lvec,INSERT_VALUES,SCATTER_DOWN,
84178b31e54SBarry Smith                             mat->Mvctx); CHKERRQ(ierr);
84264119d58SLois Curfman McInnes       ierr = VecScatterEnd(xx,mat->lvec,INSERT_VALUES,SCATTER_DOWN,
84378b31e54SBarry Smith                             mat->Mvctx); CHKERRQ(ierr);
84464119d58SLois Curfman McInnes       ierr = VecPipelineBegin(xx,mat->lvec,INSERT_VALUES,PIPELINE_UP,
84578b31e54SBarry Smith                               mat->Mvctx); CHKERRQ(ierr);
846d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
847d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
848dbb450caSBarry Smith         idx  = A->j + A->i[i] + shift;
849dbb450caSBarry Smith         v    = A->a + A->i[i] + shift;
850d6dfbf8fSBarry Smith         sum  = b[i];
851d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
852dbb450caSBarry Smith         d    = fshift + A->a[diag[i]+shift];
853d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
854dbb450caSBarry Smith         idx  = B->j + B->i[i] + shift;
855dbb450caSBarry Smith         v    = B->a + B->i[i] + shift;
856d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
857d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
858d6dfbf8fSBarry Smith       }
85964119d58SLois Curfman McInnes       ierr = VecPipelineEnd(xx,mat->lvec,INSERT_VALUES,PIPELINE_UP,
86078b31e54SBarry Smith                             mat->Mvctx); CHKERRQ(ierr);
861d6dfbf8fSBarry Smith     }
862d6dfbf8fSBarry Smith   }
863d6dfbf8fSBarry Smith   else if ((flag & SOR_LOCAL_SYMMETRIC_SWEEP) == SOR_LOCAL_SYMMETRIC_SWEEP){
864da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
865dbb450caSBarry Smith       return MatRelax(mat->A,bb,omega,flag,fshift,its,xx);
866da3a660dSBarry Smith     }
86764119d58SLois Curfman McInnes     ierr=VecScatterBegin(xx,mat->lvec,INSERT_VALUES,SCATTER_ALL,mat->Mvctx);
86878b31e54SBarry Smith     CHKERRQ(ierr);
86964119d58SLois Curfman McInnes     ierr = VecScatterEnd(xx,mat->lvec,INSERT_VALUES,SCATTER_ALL,mat->Mvctx);
87078b31e54SBarry Smith     CHKERRQ(ierr);
871d6dfbf8fSBarry Smith     while (its--) {
872d6dfbf8fSBarry Smith       /* go down through the rows */
873d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
874d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
875dbb450caSBarry Smith         idx  = A->j + A->i[i] + shift;
876dbb450caSBarry Smith         v    = A->a + A->i[i] + shift;
877d6dfbf8fSBarry Smith         sum  = b[i];
878d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
879dbb450caSBarry Smith         d    = fshift + A->a[diag[i]+shift];
880d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
881dbb450caSBarry Smith         idx  = B->j + B->i[i] + shift;
882dbb450caSBarry Smith         v    = B->a + B->i[i] + shift;
883d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
884d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
885d6dfbf8fSBarry Smith       }
886d6dfbf8fSBarry Smith       /* come up through the rows */
887d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
888d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
889dbb450caSBarry Smith         idx  = A->j + A->i[i] + shift;
890dbb450caSBarry Smith         v    = A->a + A->i[i] + shift;
891d6dfbf8fSBarry Smith         sum  = b[i];
892d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
893dbb450caSBarry Smith         d    = fshift + A->a[diag[i]+shift];
894d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
895dbb450caSBarry Smith         idx  = B->j + B->i[i] + shift;
896dbb450caSBarry Smith         v    = B->a + B->i[i] + shift;
897d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
898d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
899d6dfbf8fSBarry Smith       }
900d6dfbf8fSBarry Smith     }
901d6dfbf8fSBarry Smith   }
902d6dfbf8fSBarry Smith   else if (flag & SOR_LOCAL_FORWARD_SWEEP){
903da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
904dbb450caSBarry Smith       return MatRelax(mat->A,bb,omega,flag,fshift,its,xx);
905da3a660dSBarry Smith     }
90664119d58SLois Curfman McInnes     ierr=VecScatterBegin(xx,mat->lvec,INSERT_VALUES,SCATTER_ALL,mat->Mvctx);
90778b31e54SBarry Smith     CHKERRQ(ierr);
90864119d58SLois Curfman McInnes     ierr = VecScatterEnd(xx,mat->lvec,INSERT_VALUES,SCATTER_ALL,mat->Mvctx);
90978b31e54SBarry Smith     CHKERRQ(ierr);
910d6dfbf8fSBarry Smith     while (its--) {
911d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
912d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
913dbb450caSBarry Smith         idx  = A->j + A->i[i] + shift;
914dbb450caSBarry Smith         v    = A->a + A->i[i] + shift;
915d6dfbf8fSBarry Smith         sum  = b[i];
916d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
917dbb450caSBarry Smith         d    = fshift + A->a[diag[i]+shift];
918d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
919dbb450caSBarry Smith         idx  = B->j + B->i[i] + shift;
920dbb450caSBarry Smith         v    = B->a + B->i[i] + shift;
921d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
922d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
923d6dfbf8fSBarry Smith       }
924d6dfbf8fSBarry Smith     }
925d6dfbf8fSBarry Smith   }
926d6dfbf8fSBarry Smith   else if (flag & SOR_LOCAL_BACKWARD_SWEEP){
927da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
928dbb450caSBarry Smith       return MatRelax(mat->A,bb,omega,flag,fshift,its,xx);
929da3a660dSBarry Smith     }
93064119d58SLois Curfman McInnes     ierr = VecScatterBegin(xx,mat->lvec,INSERT_VALUES,SCATTER_ALL,
93178b31e54SBarry Smith                             mat->Mvctx); CHKERRQ(ierr);
93264119d58SLois Curfman McInnes     ierr = VecScatterEnd(xx,mat->lvec,INSERT_VALUES,SCATTER_ALL,
93378b31e54SBarry Smith                             mat->Mvctx); CHKERRQ(ierr);
934d6dfbf8fSBarry Smith     while (its--) {
935d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
936d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
937dbb450caSBarry Smith         idx  = A->j + A->i[i] + shift;
938dbb450caSBarry Smith         v    = A->a + A->i[i] + shift;
939d6dfbf8fSBarry Smith         sum  = b[i];
940d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
941dbb450caSBarry Smith         d    = fshift + A->a[diag[i]+shift];
942d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
943dbb450caSBarry Smith         idx  = B->j + B->i[i] + shift;
944dbb450caSBarry Smith         v    = B->a + B->i[i] + shift;
945d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
946d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
947d6dfbf8fSBarry Smith       }
948d6dfbf8fSBarry Smith     }
949d6dfbf8fSBarry Smith   }
9508a729477SBarry Smith   return 0;
9518a729477SBarry Smith }
952a66be287SLois Curfman McInnes 
953fc76ce87SLois Curfman McInnes static int MatGetInfo_MPIAIJ(Mat matin,MatInfoType flag,int *nz,
954fc76ce87SLois Curfman McInnes                              int *nzalloc,int *mem)
955a66be287SLois Curfman McInnes {
956a66be287SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
957a66be287SLois Curfman McInnes   Mat        A = mat->A, B = mat->B;
958a66be287SLois Curfman McInnes   int        ierr, isend[3], irecv[3], nzA, nzallocA, memA;
959a66be287SLois Curfman McInnes 
96078b31e54SBarry Smith   ierr = MatGetInfo(A,MAT_LOCAL,&nzA,&nzallocA,&memA); CHKERRQ(ierr);
96178b31e54SBarry Smith   ierr = MatGetInfo(B,MAT_LOCAL,&isend[0],&isend[1],&isend[2]); CHKERRQ(ierr);
962a66be287SLois Curfman McInnes   isend[0] += nzA; isend[1] += nzallocA; isend[2] += memA;
963a66be287SLois Curfman McInnes   if (flag == MAT_LOCAL) {
964a66be287SLois Curfman McInnes     *nz = isend[0]; *nzalloc = isend[1]; *mem = isend[2];
965a66be287SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_MAX) {
966d65a2f8fSBarry Smith     MPI_Allreduce( isend, irecv,3,MPI_INT,MPI_MAX,matin->comm);
967a66be287SLois Curfman McInnes     *nz = irecv[0]; *nzalloc = irecv[1]; *mem = irecv[2];
968a66be287SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_SUM) {
969d65a2f8fSBarry Smith     MPI_Allreduce( isend, irecv,3,MPI_INT,MPI_SUM,matin->comm);
970a66be287SLois Curfman McInnes     *nz = irecv[0]; *nzalloc = irecv[1]; *mem = irecv[2];
971a66be287SLois Curfman McInnes   }
972a66be287SLois Curfman McInnes   return 0;
973a66be287SLois Curfman McInnes }
974a66be287SLois Curfman McInnes 
975299609e3SLois Curfman McInnes extern int MatLUFactorSymbolic_MPIAIJ(Mat,IS,IS,double,Mat*);
976299609e3SLois Curfman McInnes extern int MatLUFactorNumeric_MPIAIJ(Mat,Mat*);
977299609e3SLois Curfman McInnes extern int MatLUFactor_MPIAIJ(Mat,IS,IS,double);
978299609e3SLois Curfman McInnes extern int MatILUFactorSymbolic_MPIAIJ(Mat,IS,IS,double,int,Mat *);
979299609e3SLois Curfman McInnes extern int MatSolve_MPIAIJ(Mat,Vec,Vec);
980299609e3SLois Curfman McInnes extern int MatSolveAdd_MPIAIJ(Mat,Vec,Vec,Vec);
981299609e3SLois Curfman McInnes extern int MatSolveTrans_MPIAIJ(Mat,Vec,Vec);
982299609e3SLois Curfman McInnes extern int MatSolveTransAdd_MPIAIJ(Mat,Vec,Vec,Vec);
983299609e3SLois Curfman McInnes 
984416022c9SBarry Smith static int MatSetOption_MPIAIJ(Mat A,MatOption op)
985c74985f6SBarry Smith {
986c0bbcb79SLois Curfman McInnes   Mat_MPIAIJ *a = (Mat_MPIAIJ *) A->data;
987c74985f6SBarry Smith 
988c0bbcb79SLois Curfman McInnes   if (op == NO_NEW_NONZERO_LOCATIONS ||
989c0bbcb79SLois Curfman McInnes       op == YES_NEW_NONZERO_LOCATIONS ||
990c0bbcb79SLois Curfman McInnes       op == COLUMNS_SORTED ||
991c0bbcb79SLois Curfman McInnes       op == ROW_ORIENTED) {
992c0bbcb79SLois Curfman McInnes         MatSetOption(a->A,op);
993c0bbcb79SLois Curfman McInnes         MatSetOption(a->B,op);
994c74985f6SBarry Smith   }
995c0bbcb79SLois Curfman McInnes   else if (op == ROWS_SORTED ||
996c0bbcb79SLois Curfman McInnes            op == SYMMETRIC_MATRIX ||
997c0bbcb79SLois Curfman McInnes            op == STRUCTURALLY_SYMMETRIC_MATRIX ||
998c0bbcb79SLois Curfman McInnes            op == YES_NEW_DIAGONALS)
999c0bbcb79SLois Curfman McInnes     PLogInfo((PetscObject)A,"Info:MatSetOption_MPIAIJ:Option ignored\n");
1000bbb6d6a8SBarry Smith   else if (op == COLUMN_ORIENTED)
10014d39ef84SLois Curfman McInnes     {SETERRQ(PETSC_ERR_SUP,"MatSetOption_MPIAIJ:COLUMN_ORIENTED");}
1002c0bbcb79SLois Curfman McInnes   else if (op == NO_NEW_DIAGONALS)
10034d39ef84SLois Curfman McInnes     {SETERRQ(PETSC_ERR_SUP,"MatSetOption_MPIAIJ:NO_NEW_DIAGONALS");}
1004c0bbcb79SLois Curfman McInnes   else
10054d39ef84SLois Curfman McInnes     {SETERRQ(PETSC_ERR_SUP,"MatSetOption_MPIAIJ:unknown option");}
1006c74985f6SBarry Smith   return 0;
1007c74985f6SBarry Smith }
1008c74985f6SBarry Smith 
1009d1710a03SLois Curfman McInnes static int MatGetSize_MPIAIJ(Mat matin,int *m,int *n)
1010c74985f6SBarry Smith {
101144a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
1012c74985f6SBarry Smith   *m = mat->M; *n = mat->N;
1013c74985f6SBarry Smith   return 0;
1014c74985f6SBarry Smith }
1015c74985f6SBarry Smith 
1016d1710a03SLois Curfman McInnes static int MatGetLocalSize_MPIAIJ(Mat matin,int *m,int *n)
1017c74985f6SBarry Smith {
101844a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
1019b7c46309SBarry Smith   *m = mat->m; *n = mat->N;
1020c74985f6SBarry Smith   return 0;
1021c74985f6SBarry Smith }
1022c74985f6SBarry Smith 
1023d1710a03SLois Curfman McInnes static int MatGetOwnershipRange_MPIAIJ(Mat matin,int *m,int *n)
1024c74985f6SBarry Smith {
102544a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
1026c74985f6SBarry Smith   *m = mat->rstart; *n = mat->rend;
1027c74985f6SBarry Smith   return 0;
1028c74985f6SBarry Smith }
1029c74985f6SBarry Smith 
103039e00950SLois Curfman McInnes static int MatGetRow_MPIAIJ(Mat matin,int row,int *nz,int **idx,Scalar **v)
103139e00950SLois Curfman McInnes {
1032154123eaSLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
1033154123eaSLois Curfman McInnes   Scalar     *vworkA, *vworkB, **pvA, **pvB;
1034154123eaSLois Curfman McInnes   int        i, ierr, *cworkA, *cworkB, **pcA, **pcB, cstart = mat->cstart;
1035154123eaSLois Curfman McInnes   int        nztot, nzA, nzB, lrow, rstart = mat->rstart, rend = mat->rend;
103639e00950SLois Curfman McInnes 
1037416022c9SBarry Smith   if (row < rstart || row >= rend) SETERRQ(1,"MatGetRow_MPIAIJ:only local rows")
1038abc0e9e4SLois Curfman McInnes   lrow = row - rstart;
103939e00950SLois Curfman McInnes 
1040154123eaSLois Curfman McInnes   pvA = &vworkA; pcA = &cworkA; pvB = &vworkB; pcB = &cworkB;
1041154123eaSLois Curfman McInnes   if (!v)   {pvA = 0; pvB = 0;}
1042154123eaSLois Curfman McInnes   if (!idx) {pcA = 0; if (!v) pcB = 0;}
104378b31e54SBarry Smith   ierr = MatGetRow(mat->A,lrow,&nzA,pcA,pvA); CHKERRQ(ierr);
104478b31e54SBarry Smith   ierr = MatGetRow(mat->B,lrow,&nzB,pcB,pvB); CHKERRQ(ierr);
1045154123eaSLois Curfman McInnes   nztot = nzA + nzB;
1046154123eaSLois Curfman McInnes 
1047154123eaSLois Curfman McInnes   if (v  || idx) {
1048154123eaSLois Curfman McInnes     if (nztot) {
1049154123eaSLois Curfman McInnes       /* Sort by increasing column numbers, assuming A and B already sorted */
1050299609e3SLois Curfman McInnes       int imark;
105148b35521SBarry Smith       if (mat->assembled) {
1052154123eaSLois Curfman McInnes         for (i=0; i<nzB; i++) cworkB[i] = mat->garray[cworkB[i]];
105348b35521SBarry Smith       }
1054154123eaSLois Curfman McInnes       if (v) {
105578b31e54SBarry Smith         *v = (Scalar *) PETSCMALLOC( (nztot)*sizeof(Scalar) ); CHKPTRQ(*v);
105639e00950SLois Curfman McInnes         for ( i=0; i<nzB; i++ ) {
1057154123eaSLois Curfman McInnes           if (cworkB[i] < cstart)   (*v)[i] = vworkB[i];
1058154123eaSLois Curfman McInnes           else break;
1059154123eaSLois Curfman McInnes         }
1060154123eaSLois Curfman McInnes         imark = i;
1061154123eaSLois Curfman McInnes         for ( i=0; i<nzA; i++ )     (*v)[imark+i] = vworkA[i];
1062299609e3SLois Curfman McInnes         for ( i=imark; i<nzB; i++ ) (*v)[nzA+i] = vworkB[i];
1063154123eaSLois Curfman McInnes       }
1064154123eaSLois Curfman McInnes       if (idx) {
106578b31e54SBarry Smith         *idx = (int *) PETSCMALLOC( (nztot)*sizeof(int) ); CHKPTRQ(*idx);
1066154123eaSLois Curfman McInnes         for (i=0; i<nzA; i++) cworkA[i] += cstart;
1067154123eaSLois Curfman McInnes         for ( i=0; i<nzB; i++ ) {
1068154123eaSLois Curfman McInnes           if (cworkB[i] < cstart)   (*idx)[i] = cworkB[i];
1069154123eaSLois Curfman McInnes           else break;
1070154123eaSLois Curfman McInnes         }
1071154123eaSLois Curfman McInnes         imark = i;
1072154123eaSLois Curfman McInnes         for ( i=0; i<nzA; i++ )     (*idx)[imark+i] = cworkA[i];
1073299609e3SLois Curfman McInnes         for ( i=imark; i<nzB; i++ ) (*idx)[nzA+i] = cworkB[i];
107439e00950SLois Curfman McInnes       }
107539e00950SLois Curfman McInnes     }
107639e00950SLois Curfman McInnes     else {*idx = 0; *v=0;}
1077154123eaSLois Curfman McInnes   }
107839e00950SLois Curfman McInnes   *nz = nztot;
107978b31e54SBarry Smith   ierr = MatRestoreRow(mat->A,lrow,&nzA,pcA,pvA); CHKERRQ(ierr);
108078b31e54SBarry Smith   ierr = MatRestoreRow(mat->B,lrow,&nzB,pcB,pvB); CHKERRQ(ierr);
108139e00950SLois Curfman McInnes   return 0;
108239e00950SLois Curfman McInnes }
108339e00950SLois Curfman McInnes 
108439e00950SLois Curfman McInnes static int MatRestoreRow_MPIAIJ(Mat mat,int row,int *nz,int **idx,Scalar **v)
108539e00950SLois Curfman McInnes {
108678b31e54SBarry Smith   if (idx) PETSCFREE(*idx);
108778b31e54SBarry Smith   if (v) PETSCFREE(*v);
108839e00950SLois Curfman McInnes   return 0;
108939e00950SLois Curfman McInnes }
109039e00950SLois Curfman McInnes 
1091855ac2c5SLois Curfman McInnes static int MatNorm_MPIAIJ(Mat mat,MatNormType type,double *norm)
1092855ac2c5SLois Curfman McInnes {
1093855ac2c5SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
1094ec8511deSBarry Smith   Mat_SeqAIJ *amat = (Mat_SeqAIJ*) aij->A->data, *bmat = (Mat_SeqAIJ*) aij->B->data;
1095416022c9SBarry Smith   int        ierr, i, j, cstart = aij->cstart,shift = amat->indexshift;
1096416022c9SBarry Smith   double     sum = 0.0;
109704ca555eSLois Curfman McInnes   Scalar     *v;
109804ca555eSLois Curfman McInnes 
1099416022c9SBarry Smith   if (!aij->assembled) SETERRQ(1,"MatNorm_MPIAIJ:Must assemble matrix");
110017699dbbSLois Curfman McInnes   if (aij->size == 1) {
110114183eadSLois Curfman McInnes     ierr =  MatNorm(aij->A,type,norm); CHKERRQ(ierr);
110237fa93a5SLois Curfman McInnes   } else {
110304ca555eSLois Curfman McInnes     if (type == NORM_FROBENIUS) {
110404ca555eSLois Curfman McInnes       v = amat->a;
110504ca555eSLois Curfman McInnes       for (i=0; i<amat->nz; i++ ) {
110604ca555eSLois Curfman McInnes #if defined(PETSC_COMPLEX)
110704ca555eSLois Curfman McInnes         sum += real(conj(*v)*(*v)); v++;
110804ca555eSLois Curfman McInnes #else
110904ca555eSLois Curfman McInnes         sum += (*v)*(*v); v++;
111004ca555eSLois Curfman McInnes #endif
111104ca555eSLois Curfman McInnes       }
111204ca555eSLois Curfman McInnes       v = bmat->a;
111304ca555eSLois Curfman McInnes       for (i=0; i<bmat->nz; i++ ) {
111404ca555eSLois Curfman McInnes #if defined(PETSC_COMPLEX)
111504ca555eSLois Curfman McInnes         sum += real(conj(*v)*(*v)); v++;
111604ca555eSLois Curfman McInnes #else
111704ca555eSLois Curfman McInnes         sum += (*v)*(*v); v++;
111804ca555eSLois Curfman McInnes #endif
111904ca555eSLois Curfman McInnes       }
112004ca555eSLois Curfman McInnes       MPI_Allreduce((void*)&sum,(void*)norm,1,MPI_DOUBLE,MPI_SUM,mat->comm);
112104ca555eSLois Curfman McInnes       *norm = sqrt(*norm);
112204ca555eSLois Curfman McInnes     }
112304ca555eSLois Curfman McInnes     else if (type == NORM_1) { /* max column norm */
112404ca555eSLois Curfman McInnes       double *tmp, *tmp2;
112504ca555eSLois Curfman McInnes       int    *jj, *garray = aij->garray;
112604ca555eSLois Curfman McInnes       tmp  = (double *) PETSCMALLOC( aij->N*sizeof(double) ); CHKPTRQ(tmp);
112704ca555eSLois Curfman McInnes       tmp2 = (double *) PETSCMALLOC( aij->N*sizeof(double) ); CHKPTRQ(tmp2);
1128416022c9SBarry Smith       PetscZero(tmp,aij->N*sizeof(double));
112904ca555eSLois Curfman McInnes       *norm = 0.0;
113004ca555eSLois Curfman McInnes       v = amat->a; jj = amat->j;
113104ca555eSLois Curfman McInnes       for ( j=0; j<amat->nz; j++ ) {
113204ca555eSLois Curfman McInnes #if defined(PETSC_COMPLEX)
1133dbb450caSBarry Smith         tmp[cstart + *jj++ + shift] += abs(*v++);
113404ca555eSLois Curfman McInnes #else
1135dbb450caSBarry Smith         tmp[cstart + *jj++ + shift] += fabs(*v++);
113604ca555eSLois Curfman McInnes #endif
113704ca555eSLois Curfman McInnes       }
113804ca555eSLois Curfman McInnes       v = bmat->a; jj = bmat->j;
113904ca555eSLois Curfman McInnes       for ( j=0; j<bmat->nz; j++ ) {
114004ca555eSLois Curfman McInnes #if defined(PETSC_COMPLEX)
1141dbb450caSBarry Smith         tmp[garray[*jj++ + shift]] += abs(*v++);
114204ca555eSLois Curfman McInnes #else
1143dbb450caSBarry Smith         tmp[garray[*jj++ + shift]] += fabs(*v++);
114404ca555eSLois Curfman McInnes #endif
114504ca555eSLois Curfman McInnes       }
114604ca555eSLois Curfman McInnes       MPI_Allreduce((void*)tmp,(void*)tmp2,aij->N,MPI_DOUBLE,MPI_SUM,mat->comm);
114704ca555eSLois Curfman McInnes       for ( j=0; j<aij->N; j++ ) {
114804ca555eSLois Curfman McInnes         if (tmp2[j] > *norm) *norm = tmp2[j];
114904ca555eSLois Curfman McInnes       }
115004ca555eSLois Curfman McInnes       PETSCFREE(tmp); PETSCFREE(tmp2);
115104ca555eSLois Curfman McInnes     }
115204ca555eSLois Curfman McInnes     else if (type == NORM_INFINITY) { /* max row norm */
115304ca555eSLois Curfman McInnes       double normtemp = 0.0;
115404ca555eSLois Curfman McInnes       for ( j=0; j<amat->m; j++ ) {
1155dbb450caSBarry Smith         v = amat->a + amat->i[j] + shift;
115604ca555eSLois Curfman McInnes         sum = 0.0;
115704ca555eSLois Curfman McInnes         for ( i=0; i<amat->i[j+1]-amat->i[j]; i++ ) {
115804ca555eSLois Curfman McInnes #if defined(PETSC_COMPLEX)
115904ca555eSLois Curfman McInnes           sum += abs(*v); v++;
116004ca555eSLois Curfman McInnes #else
116104ca555eSLois Curfman McInnes           sum += fabs(*v); v++;
116204ca555eSLois Curfman McInnes #endif
116304ca555eSLois Curfman McInnes         }
1164dbb450caSBarry Smith         v = bmat->a + bmat->i[j] + shift;
116504ca555eSLois Curfman McInnes         for ( i=0; i<bmat->i[j+1]-bmat->i[j]; i++ ) {
116604ca555eSLois Curfman McInnes #if defined(PETSC_COMPLEX)
116704ca555eSLois Curfman McInnes           sum += abs(*v); v++;
116804ca555eSLois Curfman McInnes #else
116904ca555eSLois Curfman McInnes           sum += fabs(*v); v++;
117004ca555eSLois Curfman McInnes #endif
117104ca555eSLois Curfman McInnes         }
117204ca555eSLois Curfman McInnes         if (sum > normtemp) normtemp = sum;
117304ca555eSLois Curfman McInnes         MPI_Allreduce((void*)&normtemp,(void*)norm,1,MPI_DOUBLE,MPI_MAX,mat->comm);
117404ca555eSLois Curfman McInnes       }
117504ca555eSLois Curfman McInnes     }
117604ca555eSLois Curfman McInnes     else {
117748d91487SBarry Smith       SETERRQ(1,"MatNorm_MPIRow:No support for two norm");
117804ca555eSLois Curfman McInnes     }
117937fa93a5SLois Curfman McInnes   }
1180855ac2c5SLois Curfman McInnes   return 0;
1181855ac2c5SLois Curfman McInnes }
1182855ac2c5SLois Curfman McInnes 
11830de55854SLois Curfman McInnes static int MatTranspose_MPIAIJ(Mat A,Mat *matout)
1184b7c46309SBarry Smith {
1185b7c46309SBarry Smith   Mat_MPIAIJ *a = (Mat_MPIAIJ *) A->data;
1186dbb450caSBarry Smith   Mat_SeqAIJ *Aloc = (Mat_SeqAIJ *) a->A->data;
1187416022c9SBarry Smith   int        ierr,shift = Aloc->indexshift;
1188416022c9SBarry Smith   Mat        B;
1189b7c46309SBarry Smith   int        M = a->M, N = a->N,m,*ai,*aj,row,*cols,i,*ct;
1190b7c46309SBarry Smith   Scalar     *array;
1191b7c46309SBarry Smith 
1192416022c9SBarry Smith   if (!matout && M != N) SETERRQ(1,"MatTranspose_MPIAIJ:Square only in-place");
1193b7c46309SBarry Smith   ierr = MatCreateMPIAIJ(A->comm,PETSC_DECIDE,PETSC_DECIDE,N,M,0,0,0,0,&B);
1194b7c46309SBarry Smith   CHKERRQ(ierr);
1195b7c46309SBarry Smith 
1196b7c46309SBarry Smith   /* copy over the A part */
1197ec8511deSBarry Smith   Aloc = (Mat_SeqAIJ*) a->A->data;
1198b7c46309SBarry Smith   m = Aloc->m; ai = Aloc->i; aj = Aloc->j; array = Aloc->a;
1199b7c46309SBarry Smith   row = a->rstart;
1200dbb450caSBarry Smith   for ( i=0; i<ai[m]+shift; i++ ) {aj[i] += a->cstart + shift;}
1201b7c46309SBarry Smith   for ( i=0; i<m; i++ ) {
1202416022c9SBarry Smith     ierr = MatSetValues(B,ai[i+1]-ai[i],aj,1,&row,array,INSERT_VALUES);CHKERRQ(ierr);
1203b7c46309SBarry Smith     row++; array += ai[i+1]-ai[i]; aj += ai[i+1]-ai[i];
1204b7c46309SBarry Smith   }
1205b7c46309SBarry Smith   aj = Aloc->j;
1206dbb450caSBarry Smith   for ( i=0; i<ai[m]|+shift; i++ ) {aj[i] -= a->cstart + shift;}
1207b7c46309SBarry Smith 
1208b7c46309SBarry Smith   /* copy over the B part */
1209ec8511deSBarry Smith   Aloc = (Mat_SeqAIJ*) a->B->data;
1210b7c46309SBarry Smith   m = Aloc->m;  ai = Aloc->i; aj = Aloc->j; array = Aloc->a;
1211b7c46309SBarry Smith   row = a->rstart;
12121987afe7SBarry Smith   ct = cols = (int *) PETSCMALLOC( (1+ai[m]-shift)*sizeof(int) ); CHKPTRQ(cols);
1213dbb450caSBarry Smith   for ( i=0; i<ai[m]+shift; i++ ) {cols[i] = a->garray[aj[i]+shift];}
1214b7c46309SBarry Smith   for ( i=0; i<m; i++ ) {
1215416022c9SBarry Smith     ierr = MatSetValues(B,ai[i+1]-ai[i],cols,1,&row,array,INSERT_VALUES);CHKERRQ(ierr);
1216b7c46309SBarry Smith     row++; array += ai[i+1]-ai[i]; cols += ai[i+1]-ai[i];
1217b7c46309SBarry Smith   }
1218b7c46309SBarry Smith   PETSCFREE(ct);
1219b7c46309SBarry Smith   ierr = MatAssemblyBegin(B,FINAL_ASSEMBLY); CHKERRQ(ierr);
1220b7c46309SBarry Smith   ierr = MatAssemblyEnd(B,FINAL_ASSEMBLY); CHKERRQ(ierr);
12210de55854SLois Curfman McInnes   if (matout) {
12220de55854SLois Curfman McInnes     *matout = B;
12230de55854SLois Curfman McInnes   } else {
12240de55854SLois Curfman McInnes     /* This isn't really an in-place transpose .... but free data structures from a */
12250de55854SLois Curfman McInnes     PETSCFREE(a->rowners);
12260de55854SLois Curfman McInnes     ierr = MatDestroy(a->A); CHKERRQ(ierr);
12270de55854SLois Curfman McInnes     ierr = MatDestroy(a->B); CHKERRQ(ierr);
12280de55854SLois Curfman McInnes     if (a->colmap) PETSCFREE(a->colmap);
12290de55854SLois Curfman McInnes     if (a->garray) PETSCFREE(a->garray);
12300de55854SLois Curfman McInnes     if (a->lvec) VecDestroy(a->lvec);
1231*a56f8943SBarry Smith     if (a->Mvctx) VecScatterDestroy(a->Mvctx);
12320de55854SLois Curfman McInnes     PETSCFREE(a);
1233416022c9SBarry Smith     PetscMemcpy(A,B,sizeof(struct _Mat));
12340de55854SLois Curfman McInnes     PETSCHEADERDESTROY(B);
12350de55854SLois Curfman McInnes   }
1236b7c46309SBarry Smith   return 0;
1237b7c46309SBarry Smith }
1238b7c46309SBarry Smith 
1239fc76ce87SLois Curfman McInnes extern int MatConvert_MPIAIJ(Mat,MatType,Mat *);
1240*a56f8943SBarry Smith static int MatCopyPrivate_MPIAIJ(Mat,Mat *,int);
1241d6dfbf8fSBarry Smith 
12428a729477SBarry Smith /* -------------------------------------------------------------------*/
12432ee70a88SLois Curfman McInnes static struct _MatOps MatOps = {MatSetValues_MPIAIJ,
124439e00950SLois Curfman McInnes        MatGetRow_MPIAIJ,MatRestoreRow_MPIAIJ,
124544a69424SLois Curfman McInnes        MatMult_MPIAIJ,MatMultAdd_MPIAIJ,
124644a69424SLois Curfman McInnes        MatMultTrans_MPIAIJ,MatMultTransAdd_MPIAIJ,
1247299609e3SLois Curfman McInnes        MatSolve_MPIAIJ,MatSolveAdd_MPIAIJ,
1248299609e3SLois Curfman McInnes        MatSolveTrans_MPIAIJ,MatSolveTransAdd_MPIAIJ,
1249299609e3SLois Curfman McInnes        MatLUFactor_MPIAIJ,0,
125044a69424SLois Curfman McInnes        MatRelax_MPIAIJ,
1251b7c46309SBarry Smith        MatTranspose_MPIAIJ,
1252a66be287SLois Curfman McInnes        MatGetInfo_MPIAIJ,0,
1253855ac2c5SLois Curfman McInnes        MatGetDiagonal_MPIAIJ,0,MatNorm_MPIAIJ,
1254ee50ffe9SBarry Smith        MatAssemblyBegin_MPIAIJ,MatAssemblyEnd_MPIAIJ,
12551eb62cbbSBarry Smith        0,
1256299609e3SLois Curfman McInnes        MatSetOption_MPIAIJ,MatZeroEntries_MPIAIJ,MatZeroRows_MPIAIJ,
1257299609e3SLois Curfman McInnes        MatGetReordering_MPIAIJ,
1258299609e3SLois Curfman McInnes        MatLUFactorSymbolic_MPIAIJ,MatLUFactorNumeric_MPIAIJ,0,0,
1259d1710a03SLois Curfman McInnes        MatGetSize_MPIAIJ,MatGetLocalSize_MPIAIJ,MatGetOwnershipRange_MPIAIJ,
1260299609e3SLois Curfman McInnes        MatILUFactorSymbolic_MPIAIJ,0,
1261ff7509f2SBarry Smith        0,0,MatConvert_MPIAIJ,0,0,MatCopyPrivate_MPIAIJ};
12628a729477SBarry Smith 
12631987afe7SBarry Smith /*@C
1264ff756334SLois Curfman McInnes    MatCreateMPIAIJ - Creates a sparse parallel matrix in AIJ format
1265ff756334SLois Curfman McInnes    (the default parallel PETSc format).
12668a729477SBarry Smith 
12678a729477SBarry Smith    Input Parameters:
12681eb62cbbSBarry Smith .  comm - MPI communicator
12697d3e4905SLois Curfman McInnes .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
12707d3e4905SLois Curfman McInnes .  n - number of local columns (or PETSC_DECIDE to have calculated
12717d3e4905SLois Curfman McInnes            if N is given)
12727d3e4905SLois Curfman McInnes .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
12737d3e4905SLois Curfman McInnes .  N - number of global columns (or PETSC_DECIDE to have calculated
12747d3e4905SLois Curfman McInnes            if n is given)
1275ab693e5aSLois Curfman McInnes .  d_nz - number of nonzeros per row in diagonal portion of local submatrix
1276ff756334SLois Curfman McInnes            (same for all local rows)
1277ab693e5aSLois Curfman McInnes .  d_nzz - number of nonzeros per row in diagonal portion of local submatrix
1278ab693e5aSLois Curfman McInnes            or null (possibly different for each row).  You must leave room
1279ab693e5aSLois Curfman McInnes            for the diagonal entry even if it is zero.
1280ab693e5aSLois Curfman McInnes .  o_nz - number of nonzeros per row in off-diagonal portion of local
1281ab693e5aSLois Curfman McInnes            submatrix (same for all local rows).
1282ab693e5aSLois Curfman McInnes .  o_nzz - number of nonzeros per row in off-diagonal portion of local
1283ab693e5aSLois Curfman McInnes            submatrix or null (possibly different for each row).
12848a729477SBarry Smith 
1285ff756334SLois Curfman McInnes    Output Parameter:
12868a729477SBarry Smith .  newmat - the matrix
12878a729477SBarry Smith 
1288ff756334SLois Curfman McInnes    Notes:
1289ff756334SLois Curfman McInnes    The AIJ format (also called the Yale sparse matrix format or
1290ff756334SLois Curfman McInnes    compressed row storage), is fully compatible with standard Fortran 77
12910002213bSLois Curfman McInnes    storage.  That is, the stored row and column indices can begin at
12920002213bSLois Curfman McInnes    either one (as in Fortran) or zero.  See the users manual for details.
1293ff756334SLois Curfman McInnes 
1294ff756334SLois Curfman McInnes    The user MUST specify either the local or global matrix dimensions
1295ff756334SLois Curfman McInnes    (possibly both).
1296ff756334SLois Curfman McInnes 
1297e0245417SLois Curfman McInnes    Storage Information:
1298e0245417SLois Curfman McInnes    For a square global matrix we define each processor's diagonal portion
1299e0245417SLois Curfman McInnes    to be its local rows and the corresponding columns (a square submatrix);
1300e0245417SLois Curfman McInnes    each processor's off-diagonal portion encompasses the remainder of the
1301e0245417SLois Curfman McInnes    local matrix (a rectangular submatrix).
1302e0245417SLois Curfman McInnes 
1303e0245417SLois Curfman McInnes    The user can specify preallocated storage for the diagonal part of
1304e0245417SLois Curfman McInnes    the local submatrix with either d_nz or d_nnz (not both). Set both
1305e0245417SLois Curfman McInnes    d_nz and d_nnz to zero for PETSc to control dynamic memory allocation.
1306e0245417SLois Curfman McInnes    Likewise, specify preallocated storage for the off-diagonal part of
1307e0245417SLois Curfman McInnes    the local submatrix with o_nz or o_nnz (not both).
1308ff756334SLois Curfman McInnes 
1309dbd7a890SLois Curfman McInnes .keywords: matrix, aij, compressed row, sparse, parallel
1310ff756334SLois Curfman McInnes 
1311fafbff53SBarry Smith .seealso: MatCreate(), MatCreateSeqAIJ(), MatSetValues()
13128a729477SBarry Smith @*/
13131eb62cbbSBarry Smith int MatCreateMPIAIJ(MPI_Comm comm,int m,int n,int M,int N,
13141eb62cbbSBarry Smith                     int d_nz,int *d_nnz, int o_nz,int *o_nnz,Mat *newmat)
13158a729477SBarry Smith {
13168a729477SBarry Smith   Mat          mat;
1317416022c9SBarry Smith   Mat_MPIAIJ   *a;
13186abc6512SBarry Smith   int          ierr, i,sum[2],work[2];
1319416022c9SBarry Smith 
13208a729477SBarry Smith   *newmat         = 0;
132144a69424SLois Curfman McInnes   PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATMPIAIJ,comm);
1322a5a9c739SBarry Smith   PLogObjectCreate(mat);
1323416022c9SBarry Smith   mat->data       = (void *) (a = PETSCNEW(Mat_MPIAIJ)); CHKPTRQ(a);
1324416022c9SBarry Smith   PetscMemcpy(&mat->ops,&MatOps,sizeof(struct _MatOps));
132544a69424SLois Curfman McInnes   mat->destroy    = MatDestroy_MPIAIJ;
132644a69424SLois Curfman McInnes   mat->view       = MatView_MPIAIJ;
13278a729477SBarry Smith   mat->factor     = 0;
1328d6dfbf8fSBarry Smith 
132964119d58SLois Curfman McInnes   a->insertmode = NOT_SET_VALUES;
133017699dbbSLois Curfman McInnes   MPI_Comm_rank(comm,&a->rank);
133117699dbbSLois Curfman McInnes   MPI_Comm_size(comm,&a->size);
13321eb62cbbSBarry Smith 
13331987afe7SBarry Smith   if (m == PETSC_DECIDE && (d_nnz || o_nnz))
13341987afe7SBarry Smith     SETERRQ(1,"MatCreateMPIAIJ:Cannot have PETSc decide rows but set d_nnz or o_nnz");
13351987afe7SBarry Smith 
1336dbd7a890SLois Curfman McInnes   if (M == PETSC_DECIDE || N == PETSC_DECIDE) {
13371eb62cbbSBarry Smith     work[0] = m; work[1] = n;
1338d65a2f8fSBarry Smith     MPI_Allreduce( work, sum,2,MPI_INT,MPI_SUM,comm );
1339dbd7a890SLois Curfman McInnes     if (M == PETSC_DECIDE) M = sum[0];
1340dbd7a890SLois Curfman McInnes     if (N == PETSC_DECIDE) N = sum[1];
13411eb62cbbSBarry Smith   }
134217699dbbSLois Curfman McInnes   if (m == PETSC_DECIDE) {m = M/a->size + ((M % a->size) > a->rank);}
134317699dbbSLois Curfman McInnes   if (n == PETSC_DECIDE) {n = N/a->size + ((N % a->size) > a->rank);}
1344416022c9SBarry Smith   a->m = m;
1345416022c9SBarry Smith   a->n = n;
1346416022c9SBarry Smith   a->N = N;
1347416022c9SBarry Smith   a->M = M;
13481eb62cbbSBarry Smith 
13491eb62cbbSBarry Smith   /* build local table of row and column ownerships */
135017699dbbSLois Curfman McInnes   a->rowners = (int *) PETSCMALLOC(2*(a->size+2)*sizeof(int)); CHKPTRQ(a->rowners);
135117699dbbSLois Curfman McInnes   PLogObjectMemory(mat,2*(a->size+2)*sizeof(int)+sizeof(struct _Mat)+
1352464493b3SBarry Smith                        sizeof(Mat_MPIAIJ));
135317699dbbSLois Curfman McInnes   a->cowners = a->rowners + a->size + 1;
1354416022c9SBarry Smith   MPI_Allgather(&m,1,MPI_INT,a->rowners+1,1,MPI_INT,comm);
1355416022c9SBarry Smith   a->rowners[0] = 0;
135617699dbbSLois Curfman McInnes   for ( i=2; i<=a->size; i++ ) {
1357416022c9SBarry Smith     a->rowners[i] += a->rowners[i-1];
13588a729477SBarry Smith   }
135917699dbbSLois Curfman McInnes   a->rstart = a->rowners[a->rank];
136017699dbbSLois Curfman McInnes   a->rend   = a->rowners[a->rank+1];
1361416022c9SBarry Smith   MPI_Allgather(&n,1,MPI_INT,a->cowners+1,1,MPI_INT,comm);
1362416022c9SBarry Smith   a->cowners[0] = 0;
136317699dbbSLois Curfman McInnes   for ( i=2; i<=a->size; i++ ) {
1364416022c9SBarry Smith     a->cowners[i] += a->cowners[i-1];
13658a729477SBarry Smith   }
136617699dbbSLois Curfman McInnes   a->cstart = a->cowners[a->rank];
136717699dbbSLois Curfman McInnes   a->cend   = a->cowners[a->rank+1];
13688a729477SBarry Smith 
1369416022c9SBarry Smith   ierr = MatCreateSeqAIJ(MPI_COMM_SELF,m,n,d_nz,d_nnz,&a->A); CHKERRQ(ierr);
1370416022c9SBarry Smith   PLogObjectParent(mat,a->A);
1371416022c9SBarry Smith   ierr = MatCreateSeqAIJ(MPI_COMM_SELF,m,N,o_nz,o_nnz,&a->B); CHKERRQ(ierr);
1372416022c9SBarry Smith   PLogObjectParent(mat,a->B);
13738a729477SBarry Smith 
13741eb62cbbSBarry Smith   /* build cache for off array entries formed */
1375416022c9SBarry Smith   ierr = StashBuild_Private(&a->stash); CHKERRQ(ierr);
1376416022c9SBarry Smith   a->colmap    = 0;
1377416022c9SBarry Smith   a->garray    = 0;
13788a729477SBarry Smith 
13791eb62cbbSBarry Smith   /* stuff used for matrix vector multiply */
1380416022c9SBarry Smith   a->lvec      = 0;
1381416022c9SBarry Smith   a->Mvctx     = 0;
1382416022c9SBarry Smith   a->assembled = 0;
13838a729477SBarry Smith 
1384d6dfbf8fSBarry Smith   *newmat = mat;
1385d6dfbf8fSBarry Smith   return 0;
1386d6dfbf8fSBarry Smith }
1387c74985f6SBarry Smith 
1388*a56f8943SBarry Smith static int MatCopyPrivate_MPIAIJ(Mat matin,Mat *newmat,int cpvalues)
1389d6dfbf8fSBarry Smith {
1390d6dfbf8fSBarry Smith   Mat        mat;
1391416022c9SBarry Smith   Mat_MPIAIJ *a,*oldmat = (Mat_MPIAIJ *) matin->data;
13922ee70a88SLois Curfman McInnes   int        ierr, len;
1393d6dfbf8fSBarry Smith 
1394416022c9SBarry Smith   if (!oldmat->assembled) SETERRQ(1,"MatCopyPrivate_MPIAIJ:Must assemble matrix");
1395416022c9SBarry Smith   *newmat       = 0;
139644a69424SLois Curfman McInnes   PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATMPIAIJ,matin->comm);
1397a5a9c739SBarry Smith   PLogObjectCreate(mat);
1398416022c9SBarry Smith   mat->data     = (void *) (a = PETSCNEW(Mat_MPIAIJ)); CHKPTRQ(a);
1399416022c9SBarry Smith   PetscMemcpy(&mat->ops,&MatOps,sizeof(struct _MatOps));
140044a69424SLois Curfman McInnes   mat->destroy  = MatDestroy_MPIAIJ;
140144a69424SLois Curfman McInnes   mat->view     = MatView_MPIAIJ;
1402d6dfbf8fSBarry Smith   mat->factor   = matin->factor;
1403d6dfbf8fSBarry Smith 
1404416022c9SBarry Smith   a->m          = oldmat->m;
1405416022c9SBarry Smith   a->n          = oldmat->n;
1406416022c9SBarry Smith   a->M          = oldmat->M;
1407416022c9SBarry Smith   a->N          = oldmat->N;
1408d6dfbf8fSBarry Smith 
1409416022c9SBarry Smith   a->assembled  = 1;
1410416022c9SBarry Smith   a->rstart     = oldmat->rstart;
1411416022c9SBarry Smith   a->rend       = oldmat->rend;
1412416022c9SBarry Smith   a->cstart     = oldmat->cstart;
1413416022c9SBarry Smith   a->cend       = oldmat->cend;
141417699dbbSLois Curfman McInnes   a->size       = oldmat->size;
141517699dbbSLois Curfman McInnes   a->rank       = oldmat->rank;
141664119d58SLois Curfman McInnes   a->insertmode = NOT_SET_VALUES;
1417d6dfbf8fSBarry Smith 
141817699dbbSLois Curfman McInnes   a->rowners = (int *) PETSCMALLOC((a->size+1)*sizeof(int)); CHKPTRQ(a->rowners);
141917699dbbSLois Curfman McInnes   PLogObjectMemory(mat,(a->size+1)*sizeof(int)+sizeof(struct _Mat)+sizeof(Mat_MPIAIJ));
142017699dbbSLois Curfman McInnes   PetscMemcpy(a->rowners,oldmat->rowners,(a->size+1)*sizeof(int));
1421416022c9SBarry Smith   ierr = StashInitialize_Private(&a->stash); CHKERRQ(ierr);
14222ee70a88SLois Curfman McInnes   if (oldmat->colmap) {
1423416022c9SBarry Smith     a->colmap = (int *) PETSCMALLOC((a->N)*sizeof(int));CHKPTRQ(a->colmap);
1424416022c9SBarry Smith     PLogObjectMemory(mat,(a->N)*sizeof(int));
1425416022c9SBarry Smith     PetscMemcpy(a->colmap,oldmat->colmap,(a->N)*sizeof(int));
1426416022c9SBarry Smith   } else a->colmap = 0;
1427ec8511deSBarry Smith   if (oldmat->garray && (len = ((Mat_SeqAIJ *) (oldmat->B->data))->n)) {
1428416022c9SBarry Smith     a->garray = (int *) PETSCMALLOC(len*sizeof(int)); CHKPTRQ(a->garray);
1429464493b3SBarry Smith     PLogObjectMemory(mat,len*sizeof(int));
1430416022c9SBarry Smith     PetscMemcpy(a->garray,oldmat->garray,len*sizeof(int));
1431416022c9SBarry Smith   } else a->garray = 0;
1432d6dfbf8fSBarry Smith 
1433416022c9SBarry Smith   ierr =  VecDuplicate(oldmat->lvec,&a->lvec); CHKERRQ(ierr);
1434416022c9SBarry Smith   PLogObjectParent(mat,a->lvec);
1435*a56f8943SBarry Smith   ierr =  VecScatterCopy(oldmat->Mvctx,&a->Mvctx); CHKERRQ(ierr);
1436416022c9SBarry Smith   PLogObjectParent(mat,a->Mvctx);
1437416022c9SBarry Smith   ierr =  MatConvert(oldmat->A,MATSAME,&a->A); CHKERRQ(ierr);
1438416022c9SBarry Smith   PLogObjectParent(mat,a->A);
1439416022c9SBarry Smith   ierr =  MatConvert(oldmat->B,MATSAME,&a->B); CHKERRQ(ierr);
1440416022c9SBarry Smith   PLogObjectParent(mat,a->B);
14418a729477SBarry Smith   *newmat = mat;
14428a729477SBarry Smith   return 0;
14438a729477SBarry Smith }
1444416022c9SBarry Smith 
1445416022c9SBarry Smith #include "sysio.h"
1446416022c9SBarry Smith 
144702834360SBarry Smith int MatLoad_MPIAIJorMPIRow(Viewer bview,MatType type,Mat *newmat)
1448416022c9SBarry Smith {
1449d65a2f8fSBarry Smith   Mat          A;
1450416022c9SBarry Smith   int          i, nz, ierr, j,rstart, rend, fd;
1451d65a2f8fSBarry Smith   Scalar       *vals,*svals;
1452416022c9SBarry Smith   PetscObject  vobj = (PetscObject) bview;
1453416022c9SBarry Smith   MPI_Comm     comm = vobj->comm;
1454416022c9SBarry Smith   MPI_Status   status;
145517699dbbSLois Curfman McInnes   int          header[4],rank,size,*rowlengths = 0,M,N,m,*rowners,maxnz,*cols;
1456d65a2f8fSBarry Smith   int          *ourlens,*sndcounts = 0,*procsnz = 0, *offlens,jj,*mycols,*smycols;
1457d65a2f8fSBarry Smith   int          tag = ((PetscObject)bview)->tag;
1458416022c9SBarry Smith 
145917699dbbSLois Curfman McInnes   MPI_Comm_size(comm,&size); MPI_Comm_rank(comm,&rank);
146017699dbbSLois Curfman McInnes   if (!rank) {
1461416022c9SBarry Smith     ierr = ViewerFileGetDescriptor_Private(bview,&fd); CHKERRQ(ierr);
1462416022c9SBarry Smith     ierr = SYRead(fd,(char *)header,4,SYINT); CHKERRQ(ierr);
146302834360SBarry Smith     if (header[0] != MAT_COOKIE) SETERRQ(1,"MatLoad_MPIAIJorMPIRow:not matrix object");
1464416022c9SBarry Smith   }
1465416022c9SBarry Smith 
1466416022c9SBarry Smith   MPI_Bcast(header+1,3,MPI_INT,0,comm);
1467416022c9SBarry Smith   M = header[1]; N = header[2];
1468416022c9SBarry Smith   /* determine ownership of all rows */
146917699dbbSLois Curfman McInnes   m = M/size + ((M % size) > rank);
147017699dbbSLois Curfman McInnes   rowners = (int *) PETSCMALLOC((size+2)*sizeof(int)); CHKPTRQ(rowners);
1471416022c9SBarry Smith   MPI_Allgather(&m,1,MPI_INT,rowners+1,1,MPI_INT,comm);
1472416022c9SBarry Smith   rowners[0] = 0;
147317699dbbSLois Curfman McInnes   for ( i=2; i<=size; i++ ) {
1474416022c9SBarry Smith     rowners[i] += rowners[i-1];
1475416022c9SBarry Smith   }
147617699dbbSLois Curfman McInnes   rstart = rowners[rank];
147717699dbbSLois Curfman McInnes   rend   = rowners[rank+1];
1478416022c9SBarry Smith 
1479416022c9SBarry Smith   /* distribute row lengths to all processors */
1480416022c9SBarry Smith   ourlens = (int*) PETSCMALLOC( 2*(rend-rstart)*sizeof(int) ); CHKPTRQ(ourlens);
1481416022c9SBarry Smith   offlens = ourlens + (rend-rstart);
148217699dbbSLois Curfman McInnes   if (!rank) {
1483416022c9SBarry Smith     rowlengths = (int*) PETSCMALLOC( M*sizeof(int) ); CHKPTRQ(rowlengths);
1484416022c9SBarry Smith     ierr = SYRead(fd,rowlengths,M,SYINT); CHKERRQ(ierr);
148517699dbbSLois Curfman McInnes     sndcounts = (int*) PETSCMALLOC( size*sizeof(int) ); CHKPTRQ(sndcounts);
148617699dbbSLois Curfman McInnes     for ( i=0; i<size; i++ ) sndcounts[i] = rowners[i+1] - rowners[i];
1487d65a2f8fSBarry Smith     MPI_Scatterv(rowlengths,sndcounts,rowners,MPI_INT,ourlens,rend-rstart,MPI_INT,0,comm);
14886ef5f50fSLois Curfman McInnes     PETSCFREE(sndcounts);
1489416022c9SBarry Smith   }
1490416022c9SBarry Smith   else {
1491416022c9SBarry Smith     MPI_Scatterv(0,0,0,MPI_INT,ourlens,rend-rstart,MPI_INT, 0,comm);
1492416022c9SBarry Smith   }
1493416022c9SBarry Smith 
149417699dbbSLois Curfman McInnes   if (!rank) {
1495416022c9SBarry Smith     /* calculate the number of nonzeros on each processor */
149617699dbbSLois Curfman McInnes     procsnz = (int*) PETSCMALLOC( size*sizeof(int) ); CHKPTRQ(procsnz);
149717699dbbSLois Curfman McInnes     PetscZero(procsnz,size*sizeof(int));
149817699dbbSLois Curfman McInnes     for ( i=0; i<size; i++ ) {
1499416022c9SBarry Smith       for ( j=rowners[i]; j< rowners[i+1]; j++ ) {
1500416022c9SBarry Smith         procsnz[i] += rowlengths[j];
1501416022c9SBarry Smith       }
1502416022c9SBarry Smith     }
15036ef5f50fSLois Curfman McInnes     PETSCFREE(rowlengths);
1504416022c9SBarry Smith 
1505416022c9SBarry Smith     /* determine max buffer needed and allocate it */
1506416022c9SBarry Smith     maxnz = 0;
150717699dbbSLois Curfman McInnes     for ( i=0; i<size; i++ ) {
1508416022c9SBarry Smith       maxnz = PETSCMAX(maxnz,procsnz[i]);
1509416022c9SBarry Smith     }
1510416022c9SBarry Smith     cols = (int *) PETSCMALLOC( maxnz*sizeof(int) ); CHKPTRQ(cols);
1511416022c9SBarry Smith 
1512416022c9SBarry Smith     /* read in my part of the matrix column indices  */
1513416022c9SBarry Smith     nz = procsnz[0];
1514d65a2f8fSBarry Smith     mycols = (int *) PETSCMALLOC( nz*sizeof(int) ); CHKPTRQ(mycols);
1515d65a2f8fSBarry Smith     ierr = SYRead(fd,mycols,nz,SYINT); CHKERRQ(ierr);
1516d65a2f8fSBarry Smith 
1517d65a2f8fSBarry Smith     /* read in every one elses and ship off */
151817699dbbSLois Curfman McInnes     for ( i=1; i<size; i++ ) {
1519d65a2f8fSBarry Smith       nz = procsnz[i];
1520416022c9SBarry Smith       ierr = SYRead(fd,cols,nz,SYINT); CHKERRQ(ierr);
1521d65a2f8fSBarry Smith       MPI_Send(cols,nz,MPI_INT,i,tag,comm);
1522d65a2f8fSBarry Smith     }
1523d65a2f8fSBarry Smith     PETSCFREE(cols);
1524416022c9SBarry Smith   }
1525416022c9SBarry Smith   else {
1526416022c9SBarry Smith     /* determine buffer space needed for message */
1527416022c9SBarry Smith     nz = 0;
1528416022c9SBarry Smith     for ( i=0; i<m; i++ ) {
1529416022c9SBarry Smith       nz += ourlens[i];
1530416022c9SBarry Smith     }
1531d65a2f8fSBarry Smith     mycols = (int*) PETSCMALLOC( nz*sizeof(int) ); CHKPTRQ(mycols);
1532416022c9SBarry Smith 
1533416022c9SBarry Smith     /* receive message of column indices*/
1534d65a2f8fSBarry Smith     MPI_Recv(mycols,nz,MPI_INT,0,tag,comm,&status);
1535416022c9SBarry Smith     MPI_Get_count(&status,MPI_INT,&maxnz);
153602834360SBarry Smith     if (maxnz != nz) SETERRQ(1,"MatLoad_MPIAIJorMPIRow:something is wrong with file");
1537416022c9SBarry Smith   }
1538416022c9SBarry Smith 
1539416022c9SBarry Smith   /* loop over local rows, determining number of off diagonal entries */
1540416022c9SBarry Smith   PetscZero(offlens,m*sizeof(int));
1541416022c9SBarry Smith   jj = 0;
1542416022c9SBarry Smith   for ( i=0; i<m; i++ ) {
1543416022c9SBarry Smith     for ( j=0; j<ourlens[i]; j++ ) {
1544d65a2f8fSBarry Smith       if (mycols[jj] < rstart || mycols[jj] >= rend) offlens[i]++;
1545416022c9SBarry Smith       jj++;
1546416022c9SBarry Smith     }
1547416022c9SBarry Smith   }
1548d65a2f8fSBarry Smith 
1549d65a2f8fSBarry Smith   /* create our matrix */
1550416022c9SBarry Smith   for ( i=0; i<m; i++ ) {
1551416022c9SBarry Smith     ourlens[i] -= offlens[i];
1552416022c9SBarry Smith   }
1553d65a2f8fSBarry Smith   if (type == MATMPIAIJ) {
1554d65a2f8fSBarry Smith     ierr = MatCreateMPIAIJ(comm,m,PETSC_DECIDE,M,N,0,ourlens,0,offlens,newmat);CHKERRQ(ierr);
1555d65a2f8fSBarry Smith   }
1556d65a2f8fSBarry Smith   else if (type == MATMPIROW) {
1557d65a2f8fSBarry Smith     ierr = MatCreateMPIRow(comm,m,PETSC_DECIDE,M,N,0,ourlens,0,offlens,newmat);CHKERRQ(ierr);
1558d65a2f8fSBarry Smith   }
1559d65a2f8fSBarry Smith   A = *newmat;
1560d65a2f8fSBarry Smith   MatSetOption(A,COLUMNS_SORTED);
1561d65a2f8fSBarry Smith   for ( i=0; i<m; i++ ) {
1562d65a2f8fSBarry Smith     ourlens[i] += offlens[i];
1563d65a2f8fSBarry Smith   }
1564416022c9SBarry Smith 
156517699dbbSLois Curfman McInnes   if (!rank) {
1566416022c9SBarry Smith     vals = (Scalar *) PETSCMALLOC( maxnz*sizeof(Scalar) ); CHKPTRQ(vals);
1567416022c9SBarry Smith 
1568416022c9SBarry Smith     /* read in my part of the matrix numerical values  */
1569416022c9SBarry Smith     nz = procsnz[0];
1570416022c9SBarry Smith     ierr = SYRead(fd,vals,nz,SYSCALAR); CHKERRQ(ierr);
1571d65a2f8fSBarry Smith 
1572d65a2f8fSBarry Smith     /* insert into matrix */
1573d65a2f8fSBarry Smith     jj      = rstart;
1574d65a2f8fSBarry Smith     smycols = mycols;
1575d65a2f8fSBarry Smith     svals   = vals;
1576d65a2f8fSBarry Smith     for ( i=0; i<m; i++ ) {
1577d65a2f8fSBarry Smith       ierr = MatSetValues(A,1,&jj,ourlens[i],smycols,svals,INSERT_VALUES);CHKERRQ(ierr);
1578d65a2f8fSBarry Smith       smycols += ourlens[i];
1579d65a2f8fSBarry Smith       svals   += ourlens[i];
1580d65a2f8fSBarry Smith       jj++;
1581416022c9SBarry Smith     }
1582416022c9SBarry Smith 
1583d65a2f8fSBarry Smith     /* read in other processors and ship out */
158417699dbbSLois Curfman McInnes     for ( i=1; i<size; i++ ) {
1585416022c9SBarry Smith       nz = procsnz[i];
1586416022c9SBarry Smith       ierr = SYRead(fd,vals,nz,SYSCALAR); CHKERRQ(ierr);
1587d65a2f8fSBarry Smith       MPI_Send(vals,nz,MPIU_SCALAR,i,A->tag,comm);
1588416022c9SBarry Smith     }
15896ef5f50fSLois Curfman McInnes     PETSCFREE(procsnz);
1590416022c9SBarry Smith   }
1591d65a2f8fSBarry Smith   else {
1592d65a2f8fSBarry Smith     /* receive numeric values */
1593d65a2f8fSBarry Smith     vals = (Scalar*) PETSCMALLOC( nz*sizeof(Scalar) ); CHKPTRQ(vals);
1594416022c9SBarry Smith 
1595d65a2f8fSBarry Smith     /* receive message of values*/
1596d65a2f8fSBarry Smith     MPI_Recv(vals,nz,MPIU_SCALAR,0,A->tag,comm,&status);
1597d65a2f8fSBarry Smith     MPI_Get_count(&status,MPIU_SCALAR,&maxnz);
159802834360SBarry Smith     if (maxnz != nz) SETERRQ(1,"MatLoad_MPIAIJorMPIRow:something is wrong with file");
1599d65a2f8fSBarry Smith 
1600d65a2f8fSBarry Smith     /* insert into matrix */
1601d65a2f8fSBarry Smith     jj      = rstart;
1602d65a2f8fSBarry Smith     smycols = mycols;
1603d65a2f8fSBarry Smith     svals   = vals;
1604d65a2f8fSBarry Smith     for ( i=0; i<m; i++ ) {
1605d65a2f8fSBarry Smith       ierr = MatSetValues(A,1,&jj,ourlens[i],smycols,svals,INSERT_VALUES);CHKERRQ(ierr);
1606d65a2f8fSBarry Smith       smycols += ourlens[i];
1607d65a2f8fSBarry Smith       svals   += ourlens[i];
1608d65a2f8fSBarry Smith       jj++;
1609d65a2f8fSBarry Smith     }
1610d65a2f8fSBarry Smith   }
16116ef5f50fSLois Curfman McInnes   PETSCFREE(ourlens); PETSCFREE(vals); PETSCFREE(mycols); PETSCFREE(rowners);
1612d65a2f8fSBarry Smith 
1613d65a2f8fSBarry Smith   ierr = MatAssemblyBegin(A,FINAL_ASSEMBLY); CHKERRQ(ierr);
1614d65a2f8fSBarry Smith   ierr = MatAssemblyEnd(A,FINAL_ASSEMBLY); CHKERRQ(ierr);
1615416022c9SBarry Smith   return 0;
1616416022c9SBarry Smith }
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