xref: /petsc/src/mat/impls/aij/mpi/mpiaij.c (revision abc0e9e4e3d6f0c410da20f63879832668d2a788)
1cb512458SBarry Smith #ifndef lint
2*abc0e9e4SLois Curfman McInnes static char vcid[] = "$Id: mpiaij.c,v 1.17 1995/03/25 01:26:53 bsmith Exp curfman $";
3cb512458SBarry Smith #endif
48a729477SBarry Smith 
51eb62cbbSBarry Smith #include "mpiaij.h"
68a729477SBarry Smith #include "vec/vecimpl.h"
7d6dfbf8fSBarry Smith #include "inline/spops.h"
88a729477SBarry Smith 
91eb62cbbSBarry Smith #define CHUNCKSIZE   100
101eb62cbbSBarry Smith /*
111eb62cbbSBarry Smith    This is a simple minded stash. Do a linear search to determine if
121eb62cbbSBarry Smith  in stash, if not add to end.
131eb62cbbSBarry Smith */
141eb62cbbSBarry Smith static int StashValues(Stash *stash,int row,int n, int *idxn,
151eb62cbbSBarry Smith                        Scalar *values,InsertMode addv)
168a729477SBarry Smith {
171eb62cbbSBarry Smith   int    i,j,N = stash->n,found,*n_idx, *n_idy;
181eb62cbbSBarry Smith   Scalar val,*n_array;
198a729477SBarry Smith 
201eb62cbbSBarry Smith   for ( i=0; i<n; i++ ) {
211eb62cbbSBarry Smith     found = 0;
221eb62cbbSBarry Smith     val = *values++;
238a729477SBarry Smith     for ( j=0; j<N; j++ ) {
241eb62cbbSBarry Smith       if ( stash->idx[j] == row && stash->idy[j] == idxn[i]) {
251eb62cbbSBarry Smith         /* found a match */
261eb62cbbSBarry Smith         if (addv == AddValues) stash->array[j] += val;
271eb62cbbSBarry Smith         else stash->array[j] = val;
281eb62cbbSBarry Smith         found = 1;
298a729477SBarry Smith         break;
308a729477SBarry Smith       }
318a729477SBarry Smith     }
321eb62cbbSBarry Smith     if (!found) { /* not found so add to end */
331eb62cbbSBarry Smith       if ( stash->n == stash->nmax ) {
341eb62cbbSBarry Smith         /* allocate a larger stash */
351eb62cbbSBarry Smith         n_array = (Scalar *) MALLOC( (stash->nmax + CHUNCKSIZE)*(
361eb62cbbSBarry Smith                                      2*sizeof(int) + sizeof(Scalar)));
371eb62cbbSBarry Smith         CHKPTR(n_array);
381eb62cbbSBarry Smith         n_idx = (int *) (n_array + stash->nmax + CHUNCKSIZE);
391eb62cbbSBarry Smith         n_idy = (int *) (n_idx + stash->nmax + CHUNCKSIZE);
401eb62cbbSBarry Smith         MEMCPY(n_array,stash->array,stash->nmax*sizeof(Scalar));
411eb62cbbSBarry Smith         MEMCPY(n_idx,stash->idx,stash->nmax*sizeof(int));
421eb62cbbSBarry Smith         MEMCPY(n_idy,stash->idy,stash->nmax*sizeof(int));
431eb62cbbSBarry Smith         if (stash->array) FREE(stash->array);
441eb62cbbSBarry Smith         stash->array = n_array; stash->idx = n_idx; stash->idy = n_idy;
451eb62cbbSBarry Smith         stash->nmax += CHUNCKSIZE;
461eb62cbbSBarry Smith       }
471eb62cbbSBarry Smith       stash->array[stash->n]   = val;
481eb62cbbSBarry Smith       stash->idx[stash->n]     = row;
491eb62cbbSBarry Smith       stash->idy[stash->n++]   = idxn[i];
501eb62cbbSBarry Smith     }
518a729477SBarry Smith   }
528a729477SBarry Smith   return 0;
538a729477SBarry Smith }
548a729477SBarry Smith 
559e25ed09SBarry Smith /* local utility routine that creates a mapping from the global column
569e25ed09SBarry Smith number to the local number in the off-diagonal part of the local
579e25ed09SBarry Smith storage of the matrix.  This is done in a non scable way since the
589e25ed09SBarry Smith length of colmap equals the global matrix length.
599e25ed09SBarry Smith */
609e25ed09SBarry Smith static int CreateColmap(Mat mat)
619e25ed09SBarry Smith {
6244a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
6344a69424SLois Curfman McInnes   Mat_AIJ    *B = (Mat_AIJ*) aij->B->data;
649e25ed09SBarry Smith   int        n = B->n,i;
659e25ed09SBarry Smith   aij->colmap = (int *) MALLOC( aij->N*sizeof(int) ); CHKPTR(aij->colmap);
669e25ed09SBarry Smith   MEMSET(aij->colmap,0,aij->N*sizeof(int));
67*abc0e9e4SLois Curfman McInnes   for ( i=0; i<n; i++ ) aij->colmap[aij->garray[i]] = i+1;
689e25ed09SBarry Smith   return 0;
699e25ed09SBarry Smith }
709e25ed09SBarry Smith 
7144a69424SLois Curfman McInnes static int MatInsertValues_MPIAIJ(Mat mat,int m,int *idxm,int n,
721eb62cbbSBarry Smith                             int *idxn,Scalar *v,InsertMode addv)
738a729477SBarry Smith {
7444a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
751eb62cbbSBarry Smith   int        ierr,i,j, rstart = aij->rstart, rend = aij->rend;
761eb62cbbSBarry Smith   int        cstart = aij->cstart, cend = aij->cend,row,col;
778a729477SBarry Smith 
781eb62cbbSBarry Smith   if (aij->insertmode != NotSetValues && aij->insertmode != addv) {
791eb62cbbSBarry Smith     SETERR(1,"You cannot mix inserts and adds");
808a729477SBarry Smith   }
811eb62cbbSBarry Smith   aij->insertmode = addv;
828a729477SBarry Smith   for ( i=0; i<m; i++ ) {
83da3a660dSBarry Smith     if (idxm[i] < 0) SETERR(1,"Negative row index");
84da3a660dSBarry Smith     if (idxm[i] >= aij->M) SETERR(1,"Row index too large");
851eb62cbbSBarry Smith     if (idxm[i] >= rstart && idxm[i] < rend) {
861eb62cbbSBarry Smith       row = idxm[i] - rstart;
871eb62cbbSBarry Smith       for ( j=0; j<n; j++ ) {
88da3a660dSBarry Smith         if (idxn[j] < 0) SETERR(1,"Negative column index");
89da3a660dSBarry Smith         if (idxn[j] >= aij->N) SETERR(1,"Column index too large");
901eb62cbbSBarry Smith         if (idxn[j] >= cstart && idxn[j] < cend){
911eb62cbbSBarry Smith           col = idxn[j] - cstart;
921eb62cbbSBarry Smith           ierr = MatSetValues(aij->A,1,&row,1,&col,v+i*n+j,addv);CHKERR(ierr);
931eb62cbbSBarry Smith         }
941eb62cbbSBarry Smith         else {
95d6dfbf8fSBarry Smith           if (aij->assembled) {
969e25ed09SBarry Smith             if (!aij->colmap) {ierr = CreateColmap(mat); CHKERR(ierr);}
979e25ed09SBarry Smith             col = aij->colmap[idxn[j]] - 1;
989e25ed09SBarry Smith             if (col < 0) {
999e25ed09SBarry Smith               SETERR(1,"Cannot insert new off diagonal block nonzero in\
1009e25ed09SBarry Smith                      already\
101d6dfbf8fSBarry Smith                      assembled matrix. Contact petsc-maint@mcs.anl.gov\
102d6dfbf8fSBarry Smith                      if your need this feature");
103d6dfbf8fSBarry Smith             }
1049e25ed09SBarry Smith           }
1059e25ed09SBarry Smith           else col = idxn[j];
1061eb62cbbSBarry Smith           ierr = MatSetValues(aij->B,1,&row,1,&col,v+i*n+j,addv);CHKERR(ierr);
1071eb62cbbSBarry Smith         }
1081eb62cbbSBarry Smith       }
1091eb62cbbSBarry Smith     }
1101eb62cbbSBarry Smith     else {
1111eb62cbbSBarry Smith       ierr = StashValues(&aij->stash,idxm[i],n,idxn,v+i*n,addv);CHKERR(ierr);
1121eb62cbbSBarry Smith     }
1138a729477SBarry Smith   }
1148a729477SBarry Smith   return 0;
1158a729477SBarry Smith }
1168a729477SBarry Smith 
1178a729477SBarry Smith /*
1181eb62cbbSBarry Smith     the assembly code is alot like the code for vectors, we should
1191eb62cbbSBarry Smith     sometime derive a single assembly code that can be used for
1201eb62cbbSBarry Smith     either case.
1218a729477SBarry Smith */
1228a729477SBarry Smith 
12344a69424SLois Curfman McInnes static int MatBeginAssemble_MPIAIJ(Mat mat)
1248a729477SBarry Smith {
12544a69424SLois Curfman McInnes   Mat_MPIAIJ  *aij = (Mat_MPIAIJ *) mat->data;
126d6dfbf8fSBarry Smith   MPI_Comm    comm = mat->comm;
1276abc6512SBarry Smith   int         numtids = aij->numtids, *owners = aij->rowners;
1281eb62cbbSBarry Smith   int         mytid = aij->mytid;
1291eb62cbbSBarry Smith   MPI_Request *send_waits,*recv_waits;
1306abc6512SBarry Smith   int         *nprocs,i,j,idx,*procs,nsends,nreceives,nmax,*work;
1311eb62cbbSBarry Smith   int         tag = 50, *owner,*starts,count;
1321eb62cbbSBarry Smith   InsertMode  addv;
1331eb62cbbSBarry Smith   Scalar      *rvalues,*svalues;
1341eb62cbbSBarry Smith 
1351eb62cbbSBarry Smith   /* make sure all processors are either in INSERTMODE or ADDMODE */
13628988994SBarry Smith   MPI_Allreduce((void *) &aij->insertmode,(void *) &addv,1,MPI_INT,
1371eb62cbbSBarry Smith                 MPI_BOR,comm);
1381eb62cbbSBarry Smith   if (addv == (AddValues|InsertValues)) {
1391eb62cbbSBarry Smith     SETERR(1,"Some processors have inserted while others have added");
1401eb62cbbSBarry Smith   }
1411eb62cbbSBarry Smith   aij->insertmode = addv; /* in case this processor had no cache */
1421eb62cbbSBarry Smith 
1431eb62cbbSBarry Smith   /*  first count number of contributors to each processor */
1441eb62cbbSBarry Smith   nprocs = (int *) MALLOC( 2*numtids*sizeof(int) ); CHKPTR(nprocs);
1451eb62cbbSBarry Smith   MEMSET(nprocs,0,2*numtids*sizeof(int)); procs = nprocs + numtids;
1461eb62cbbSBarry Smith   owner = (int *) MALLOC( (aij->stash.n+1)*sizeof(int) ); CHKPTR(owner);
1471eb62cbbSBarry Smith   for ( i=0; i<aij->stash.n; i++ ) {
1481eb62cbbSBarry Smith     idx = aij->stash.idx[i];
1491eb62cbbSBarry Smith     for ( j=0; j<numtids; j++ ) {
1501eb62cbbSBarry Smith       if (idx >= owners[j] && idx < owners[j+1]) {
1511eb62cbbSBarry Smith         nprocs[j]++; procs[j] = 1; owner[i] = j; break;
1528a729477SBarry Smith       }
1538a729477SBarry Smith     }
1548a729477SBarry Smith   }
1551eb62cbbSBarry Smith   nsends = 0;  for ( i=0; i<numtids; i++ ) { nsends += procs[i];}
1561eb62cbbSBarry Smith 
1571eb62cbbSBarry Smith   /* inform other processors of number of messages and max length*/
1581eb62cbbSBarry Smith   work = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(work);
1591eb62cbbSBarry Smith   MPI_Allreduce((void *) procs,(void *) work,numtids,MPI_INT,MPI_SUM,comm);
1601eb62cbbSBarry Smith   nreceives = work[mytid];
1611eb62cbbSBarry Smith   MPI_Allreduce((void *) nprocs,(void *) work,numtids,MPI_INT,MPI_MAX,comm);
1621eb62cbbSBarry Smith   nmax = work[mytid];
1631eb62cbbSBarry Smith   FREE(work);
1641eb62cbbSBarry Smith 
1651eb62cbbSBarry Smith   /* post receives:
1661eb62cbbSBarry Smith        1) each message will consist of ordered pairs
1671eb62cbbSBarry Smith      (global index,value) we store the global index as a double
168d6dfbf8fSBarry Smith      to simplify the message passing.
1691eb62cbbSBarry Smith        2) since we don't know how long each individual message is we
1701eb62cbbSBarry Smith      allocate the largest needed buffer for each receive. Potentially
1711eb62cbbSBarry Smith      this is a lot of wasted space.
1721eb62cbbSBarry Smith 
1731eb62cbbSBarry Smith 
1741eb62cbbSBarry Smith        This could be done better.
1751eb62cbbSBarry Smith   */
17628988994SBarry Smith   rvalues = (Scalar *) MALLOC(3*(nreceives+1)*(nmax+1)*sizeof(Scalar));
1771eb62cbbSBarry Smith   CHKPTR(rvalues);
1781eb62cbbSBarry Smith   recv_waits = (MPI_Request *) MALLOC((nreceives+1)*sizeof(MPI_Request));
1791eb62cbbSBarry Smith   CHKPTR(recv_waits);
1801eb62cbbSBarry Smith   for ( i=0; i<nreceives; i++ ) {
1811eb62cbbSBarry Smith     MPI_Irecv((void *)(rvalues+3*nmax*i),3*nmax,MPI_SCALAR,MPI_ANY_SOURCE,tag,
1821eb62cbbSBarry Smith               comm,recv_waits+i);
1831eb62cbbSBarry Smith   }
1841eb62cbbSBarry Smith 
1851eb62cbbSBarry Smith   /* do sends:
1861eb62cbbSBarry Smith       1) starts[i] gives the starting index in svalues for stuff going to
1871eb62cbbSBarry Smith          the ith processor
1881eb62cbbSBarry Smith   */
1891eb62cbbSBarry Smith   svalues = (Scalar *) MALLOC( 3*(aij->stash.n+1)*sizeof(Scalar) );
1901eb62cbbSBarry Smith   CHKPTR(svalues);
1911eb62cbbSBarry Smith   send_waits = (MPI_Request *) MALLOC( (nsends+1)*sizeof(MPI_Request));
1921eb62cbbSBarry Smith   CHKPTR(send_waits);
1931eb62cbbSBarry Smith   starts = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(starts);
1941eb62cbbSBarry Smith   starts[0] = 0;
1951eb62cbbSBarry Smith   for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
1961eb62cbbSBarry Smith   for ( i=0; i<aij->stash.n; i++ ) {
1971eb62cbbSBarry Smith     svalues[3*starts[owner[i]]]       = (Scalar)  aij->stash.idx[i];
1981eb62cbbSBarry Smith     svalues[3*starts[owner[i]]+1]     = (Scalar)  aij->stash.idy[i];
1991eb62cbbSBarry Smith     svalues[3*(starts[owner[i]]++)+2] =  aij->stash.array[i];
2001eb62cbbSBarry Smith   }
2011eb62cbbSBarry Smith   FREE(owner);
2021eb62cbbSBarry Smith   starts[0] = 0;
2031eb62cbbSBarry Smith   for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
2041eb62cbbSBarry Smith   count = 0;
2051eb62cbbSBarry Smith   for ( i=0; i<numtids; i++ ) {
2061eb62cbbSBarry Smith     if (procs[i]) {
2071eb62cbbSBarry Smith       MPI_Isend((void*)(svalues+3*starts[i]),3*nprocs[i],MPI_SCALAR,i,tag,
2081eb62cbbSBarry Smith                 comm,send_waits+count++);
2091eb62cbbSBarry Smith     }
2101eb62cbbSBarry Smith   }
2111eb62cbbSBarry Smith   FREE(starts); FREE(nprocs);
2121eb62cbbSBarry Smith 
2131eb62cbbSBarry Smith   /* Free cache space */
2141eb62cbbSBarry Smith   aij->stash.nmax = aij->stash.n = 0;
2151eb62cbbSBarry Smith   if (aij->stash.array){ FREE(aij->stash.array); aij->stash.array = 0;}
2161eb62cbbSBarry Smith 
2171eb62cbbSBarry Smith   aij->svalues    = svalues;       aij->rvalues = rvalues;
2181eb62cbbSBarry Smith   aij->nsends     = nsends;         aij->nrecvs = nreceives;
2191eb62cbbSBarry Smith   aij->send_waits = send_waits; aij->recv_waits = recv_waits;
2201eb62cbbSBarry Smith   aij->rmax       = nmax;
2211eb62cbbSBarry Smith 
2221eb62cbbSBarry Smith   return 0;
2231eb62cbbSBarry Smith }
22444a69424SLois Curfman McInnes extern int MatSetUpMultiply_MPIAIJ(Mat);
2251eb62cbbSBarry Smith 
22644a69424SLois Curfman McInnes static int MatEndAssemble_MPIAIJ(Mat mat)
2271eb62cbbSBarry Smith {
2281eb62cbbSBarry Smith   int        ierr;
22944a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
2301eb62cbbSBarry Smith 
2311eb62cbbSBarry Smith   MPI_Status  *send_status,recv_status;
2326abc6512SBarry Smith   int         imdex,nrecvs = aij->nrecvs, count = nrecvs, i, n;
2331eb62cbbSBarry Smith   int         row,col;
2341eb62cbbSBarry Smith   Scalar      *values,val;
2351eb62cbbSBarry Smith   InsertMode  addv = aij->insertmode;
2361eb62cbbSBarry Smith 
2371eb62cbbSBarry Smith   /*  wait on receives */
2381eb62cbbSBarry Smith   while (count) {
239d6dfbf8fSBarry Smith     MPI_Waitany(nrecvs,aij->recv_waits,&imdex,&recv_status);
2401eb62cbbSBarry Smith     /* unpack receives into our local space */
241d6dfbf8fSBarry Smith     values = aij->rvalues + 3*imdex*aij->rmax;
2421eb62cbbSBarry Smith     MPI_Get_count(&recv_status,MPI_SCALAR,&n);
2431eb62cbbSBarry Smith     n = n/3;
2441eb62cbbSBarry Smith     for ( i=0; i<n; i++ ) {
2451eb62cbbSBarry Smith       row = (int) PETSCREAL(values[3*i]) - aij->rstart;
2461eb62cbbSBarry Smith       col = (int) PETSCREAL(values[3*i+1]);
2471eb62cbbSBarry Smith       val = values[3*i+2];
2481eb62cbbSBarry Smith       if (col >= aij->cstart && col < aij->cend) {
2491eb62cbbSBarry Smith           col -= aij->cstart;
2501eb62cbbSBarry Smith         MatSetValues(aij->A,1,&row,1,&col,&val,addv);
2511eb62cbbSBarry Smith       }
2521eb62cbbSBarry Smith       else {
253d6dfbf8fSBarry Smith         if (aij->assembled) {
2549e25ed09SBarry Smith           if (!aij->colmap) {ierr = CreateColmap(mat); CHKERR(ierr);}
2559e25ed09SBarry Smith           col = aij->colmap[col] - 1;
2569e25ed09SBarry Smith           if (col < 0) {
2579e25ed09SBarry Smith             SETERR(1,"Cannot insert new off diagonal block nonzero in\
2589e25ed09SBarry Smith                      already\
259d6dfbf8fSBarry Smith                      assembled matrix. Contact petsc-maint@mcs.anl.gov\
260d6dfbf8fSBarry Smith                      if your need this feature");
261d6dfbf8fSBarry Smith           }
2629e25ed09SBarry Smith         }
2631eb62cbbSBarry Smith         MatSetValues(aij->B,1,&row,1,&col,&val,addv);
2641eb62cbbSBarry Smith       }
2651eb62cbbSBarry Smith     }
2661eb62cbbSBarry Smith     count--;
2671eb62cbbSBarry Smith   }
2681eb62cbbSBarry Smith   FREE(aij->recv_waits); FREE(aij->rvalues);
2691eb62cbbSBarry Smith 
2701eb62cbbSBarry Smith   /* wait on sends */
2711eb62cbbSBarry Smith   if (aij->nsends) {
2721eb62cbbSBarry Smith     send_status = (MPI_Status *) MALLOC( aij->nsends*sizeof(MPI_Status) );
2731eb62cbbSBarry Smith     CHKPTR(send_status);
2741eb62cbbSBarry Smith     MPI_Waitall(aij->nsends,aij->send_waits,send_status);
2751eb62cbbSBarry Smith     FREE(send_status);
2761eb62cbbSBarry Smith   }
2771eb62cbbSBarry Smith   FREE(aij->send_waits); FREE(aij->svalues);
2781eb62cbbSBarry Smith 
2791eb62cbbSBarry Smith   aij->insertmode = NotSetValues;
2801eb62cbbSBarry Smith   ierr = MatBeginAssembly(aij->A); CHKERR(ierr);
2811eb62cbbSBarry Smith   ierr = MatEndAssembly(aij->A); CHKERR(ierr);
2821eb62cbbSBarry Smith 
2839e25ed09SBarry Smith   if (!aij->assembled) {
284d3c9fed9SLois Curfman McInnes     ierr = MatSetUpMultiply_MPIAIJ(mat); CHKERR(ierr);
2859e25ed09SBarry Smith   }
2861eb62cbbSBarry Smith   ierr = MatBeginAssembly(aij->B); CHKERR(ierr);
2871eb62cbbSBarry Smith   ierr = MatEndAssembly(aij->B); CHKERR(ierr);
288d6dfbf8fSBarry Smith 
289d6dfbf8fSBarry Smith   aij->assembled = 1;
2908a729477SBarry Smith   return 0;
2918a729477SBarry Smith }
2928a729477SBarry Smith 
29344a69424SLois Curfman McInnes static int MatZero_MPIAIJ(Mat A)
2941eb62cbbSBarry Smith {
29544a69424SLois Curfman McInnes   Mat_MPIAIJ *l = (Mat_MPIAIJ *) A->data;
2961eb62cbbSBarry Smith 
2971eb62cbbSBarry Smith   MatZeroEntries(l->A); MatZeroEntries(l->B);
2981eb62cbbSBarry Smith   return 0;
2991eb62cbbSBarry Smith }
3001eb62cbbSBarry Smith 
3011eb62cbbSBarry Smith /* again this uses the same basic stratagy as in the assembly and
3021eb62cbbSBarry Smith    scatter create routines, we should try to do it systemamatically
3031eb62cbbSBarry Smith    if we can figure out the proper level of generality. */
3041eb62cbbSBarry Smith 
3051eb62cbbSBarry Smith /* the code does not do the diagonal entries correctly unless the
3061eb62cbbSBarry Smith    matrix is square and the column and row owerships are identical.
3071eb62cbbSBarry Smith    This is a BUG. The only way to fix it seems to be to access
3081eb62cbbSBarry Smith    aij->A and aij->B directly and not through the MatZeroRows()
3091eb62cbbSBarry Smith    routine.
3101eb62cbbSBarry Smith */
31144a69424SLois Curfman McInnes static int MatZeroRows_MPIAIJ(Mat A,IS is,Scalar *diag)
3121eb62cbbSBarry Smith {
31344a69424SLois Curfman McInnes   Mat_MPIAIJ     *l = (Mat_MPIAIJ *) A->data;
3141eb62cbbSBarry Smith   int            i,ierr,N, *rows,*owners = l->rowners,numtids = l->numtids;
3156abc6512SBarry Smith   int            *procs,*nprocs,j,found,idx,nsends,*work;
3161eb62cbbSBarry Smith   int            nmax,*svalues,*starts,*owner,nrecvs,mytid = l->mytid;
3176abc6512SBarry Smith   int            *rvalues,tag = 67,count,base,slen,n,*source;
318d6dfbf8fSBarry Smith   int            *lens,imdex,*lrows,*values;
319d6dfbf8fSBarry Smith   MPI_Comm       comm = A->comm;
3201eb62cbbSBarry Smith   MPI_Request    *send_waits,*recv_waits;
3211eb62cbbSBarry Smith   MPI_Status     recv_status,*send_status;
3221eb62cbbSBarry Smith   IS             istmp;
3231eb62cbbSBarry Smith 
32444a69424SLois Curfman McInnes   if (!l->assembled) SETERR(1,"MatZeroRows_MPIAIJ: must assemble matrix first");
3251eb62cbbSBarry Smith   ierr = ISGetLocalSize(is,&N); CHKERR(ierr);
3261eb62cbbSBarry Smith   ierr = ISGetIndices(is,&rows); CHKERR(ierr);
3271eb62cbbSBarry Smith 
3281eb62cbbSBarry Smith   /*  first count number of contributors to each processor */
3291eb62cbbSBarry Smith   nprocs = (int *) MALLOC( 2*numtids*sizeof(int) ); CHKPTR(nprocs);
3301eb62cbbSBarry Smith   MEMSET(nprocs,0,2*numtids*sizeof(int)); procs = nprocs + numtids;
3311eb62cbbSBarry Smith   owner = (int *) MALLOC((N+1)*sizeof(int)); CHKPTR(owner); /* see note*/
3321eb62cbbSBarry Smith   for ( i=0; i<N; i++ ) {
3331eb62cbbSBarry Smith     idx = rows[i];
3341eb62cbbSBarry Smith     found = 0;
3351eb62cbbSBarry Smith     for ( j=0; j<numtids; j++ ) {
3361eb62cbbSBarry Smith       if (idx >= owners[j] && idx < owners[j+1]) {
3371eb62cbbSBarry Smith         nprocs[j]++; procs[j] = 1; owner[i] = j; found = 1; break;
3381eb62cbbSBarry Smith       }
3391eb62cbbSBarry Smith     }
340d6dfbf8fSBarry Smith     if (!found) SETERR(1,"Imdex out of range");
3411eb62cbbSBarry Smith   }
3421eb62cbbSBarry Smith   nsends = 0;  for ( i=0; i<numtids; i++ ) { nsends += procs[i];}
3431eb62cbbSBarry Smith 
3441eb62cbbSBarry Smith   /* inform other processors of number of messages and max length*/
3451eb62cbbSBarry Smith   work = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(work);
3461eb62cbbSBarry Smith   MPI_Allreduce((void *) procs,(void *) work,numtids,MPI_INT,MPI_SUM,comm);
3471eb62cbbSBarry Smith   nrecvs = work[mytid];
3481eb62cbbSBarry Smith   MPI_Allreduce((void *) nprocs,(void *) work,numtids,MPI_INT,MPI_MAX,comm);
3491eb62cbbSBarry Smith   nmax = work[mytid];
3501eb62cbbSBarry Smith   FREE(work);
3511eb62cbbSBarry Smith 
3521eb62cbbSBarry Smith   /* post receives:   */
35328988994SBarry Smith   rvalues = (int *) MALLOC((nrecvs+1)*(nmax+1)*sizeof(int)); /*see note */
3541eb62cbbSBarry Smith   CHKPTR(rvalues);
3551eb62cbbSBarry Smith   recv_waits = (MPI_Request *) MALLOC((nrecvs+1)*sizeof(MPI_Request));
3561eb62cbbSBarry Smith   CHKPTR(recv_waits);
3571eb62cbbSBarry Smith   for ( i=0; i<nrecvs; i++ ) {
3581eb62cbbSBarry Smith     MPI_Irecv((void *)(rvalues+nmax*i),nmax,MPI_INT,MPI_ANY_SOURCE,tag,
3591eb62cbbSBarry Smith               comm,recv_waits+i);
3601eb62cbbSBarry Smith   }
3611eb62cbbSBarry Smith 
3621eb62cbbSBarry Smith   /* do sends:
3631eb62cbbSBarry Smith       1) starts[i] gives the starting index in svalues for stuff going to
3641eb62cbbSBarry Smith          the ith processor
3651eb62cbbSBarry Smith   */
3661eb62cbbSBarry Smith   svalues = (int *) MALLOC( (N+1)*sizeof(int) ); CHKPTR(svalues);
3671eb62cbbSBarry Smith   send_waits = (MPI_Request *) MALLOC( (nsends+1)*sizeof(MPI_Request));
3681eb62cbbSBarry Smith   CHKPTR(send_waits);
3691eb62cbbSBarry Smith   starts = (int *) MALLOC( (numtids+1)*sizeof(int) ); CHKPTR(starts);
3701eb62cbbSBarry Smith   starts[0] = 0;
3711eb62cbbSBarry Smith   for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
3721eb62cbbSBarry Smith   for ( i=0; i<N; i++ ) {
3731eb62cbbSBarry Smith     svalues[starts[owner[i]]++] = rows[i];
3741eb62cbbSBarry Smith   }
3751eb62cbbSBarry Smith   ISRestoreIndices(is,&rows);
3761eb62cbbSBarry Smith 
3771eb62cbbSBarry Smith   starts[0] = 0;
3781eb62cbbSBarry Smith   for ( i=1; i<numtids+1; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
3791eb62cbbSBarry Smith   count = 0;
3801eb62cbbSBarry Smith   for ( i=0; i<numtids; i++ ) {
3811eb62cbbSBarry Smith     if (procs[i]) {
3821eb62cbbSBarry Smith       MPI_Isend((void*)(svalues+starts[i]),nprocs[i],MPI_INT,i,tag,
3831eb62cbbSBarry Smith                 comm,send_waits+count++);
3841eb62cbbSBarry Smith     }
3851eb62cbbSBarry Smith   }
3861eb62cbbSBarry Smith   FREE(starts);
3871eb62cbbSBarry Smith 
3881eb62cbbSBarry Smith   base = owners[mytid];
3891eb62cbbSBarry Smith 
3901eb62cbbSBarry Smith   /*  wait on receives */
3911eb62cbbSBarry Smith   lens = (int *) MALLOC( 2*(nrecvs+1)*sizeof(int) ); CHKPTR(lens);
3921eb62cbbSBarry Smith   source = lens + nrecvs;
3931eb62cbbSBarry Smith   count = nrecvs; slen = 0;
3941eb62cbbSBarry Smith   while (count) {
395d6dfbf8fSBarry Smith     MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);
3961eb62cbbSBarry Smith     /* unpack receives into our local space */
3971eb62cbbSBarry Smith     MPI_Get_count(&recv_status,MPI_INT,&n);
398d6dfbf8fSBarry Smith     source[imdex]  = recv_status.MPI_SOURCE;
399d6dfbf8fSBarry Smith     lens[imdex]  = n;
4001eb62cbbSBarry Smith     slen += n;
4011eb62cbbSBarry Smith     count--;
4021eb62cbbSBarry Smith   }
4031eb62cbbSBarry Smith   FREE(recv_waits);
4041eb62cbbSBarry Smith 
4051eb62cbbSBarry Smith   /* move the data into the send scatter */
4061eb62cbbSBarry Smith   lrows = (int *) MALLOC( slen*sizeof(int) ); CHKPTR(lrows);
4071eb62cbbSBarry Smith   count = 0;
4081eb62cbbSBarry Smith   for ( i=0; i<nrecvs; i++ ) {
4091eb62cbbSBarry Smith     values = rvalues + i*nmax;
4101eb62cbbSBarry Smith     for ( j=0; j<lens[i]; j++ ) {
4111eb62cbbSBarry Smith       lrows[count++] = values[j] - base;
4121eb62cbbSBarry Smith     }
4131eb62cbbSBarry Smith   }
4141eb62cbbSBarry Smith   FREE(rvalues); FREE(lens);
4151eb62cbbSBarry Smith   FREE(owner); FREE(nprocs);
4161eb62cbbSBarry Smith 
4171eb62cbbSBarry Smith   /* actually zap the local rows */
4181eb62cbbSBarry Smith   ierr = ISCreateSequential(slen,lrows,&istmp); CHKERR(ierr);  FREE(lrows);
4191eb62cbbSBarry Smith   ierr = MatZeroRows(l->A,istmp,diag); CHKERR(ierr);
4201eb62cbbSBarry Smith   ierr = MatZeroRows(l->B,istmp,0); CHKERR(ierr);
4211eb62cbbSBarry Smith   ierr = ISDestroy(istmp); CHKERR(ierr);
4221eb62cbbSBarry Smith 
4231eb62cbbSBarry Smith   /* wait on sends */
4241eb62cbbSBarry Smith   if (nsends) {
4251eb62cbbSBarry Smith     send_status = (MPI_Status *) MALLOC( nsends*sizeof(MPI_Status) );
4261eb62cbbSBarry Smith     CHKPTR(send_status);
4271eb62cbbSBarry Smith     MPI_Waitall(nsends,send_waits,send_status);
4281eb62cbbSBarry Smith     FREE(send_status);
4291eb62cbbSBarry Smith   }
4301eb62cbbSBarry Smith   FREE(send_waits); FREE(svalues);
4311eb62cbbSBarry Smith 
4321eb62cbbSBarry Smith 
4331eb62cbbSBarry Smith   return 0;
4341eb62cbbSBarry Smith }
4351eb62cbbSBarry Smith 
43644a69424SLois Curfman McInnes static int MatMult_MPIAIJ(Mat aijin,Vec xx,Vec yy)
4371eb62cbbSBarry Smith {
43844a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
4391eb62cbbSBarry Smith   int        ierr;
44044a69424SLois Curfman McInnes   if (!aij->assembled) SETERR(1,"MatMult_MPIAIJ: must assemble matrix first");
441d6dfbf8fSBarry Smith   ierr = VecScatterBegin(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx);
4421eb62cbbSBarry Smith   CHKERR(ierr);
4431eb62cbbSBarry Smith   ierr = MatMult(aij->A,xx,yy); CHKERR(ierr);
444d6dfbf8fSBarry Smith   ierr = VecScatterEnd(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx);
445d6dfbf8fSBarry Smith   CHKERR(ierr);
4461eb62cbbSBarry Smith   ierr = MatMultAdd(aij->B,aij->lvec,yy,yy); CHKERR(ierr);
4471eb62cbbSBarry Smith   return 0;
4481eb62cbbSBarry Smith }
4491eb62cbbSBarry Smith 
45044a69424SLois Curfman McInnes static int MatMultAdd_MPIAIJ(Mat aijin,Vec xx,Vec yy,Vec zz)
451da3a660dSBarry Smith {
45244a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
453da3a660dSBarry Smith   int        ierr;
45444a69424SLois Curfman McInnes   if (!aij->assembled) SETERR(1,"MatMult_MPIAIJ: must assemble matrix first");
455da3a660dSBarry Smith   ierr = VecScatterBegin(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx);
456da3a660dSBarry Smith   CHKERR(ierr);
457da3a660dSBarry Smith   ierr = MatMultAdd(aij->A,xx,yy,zz); CHKERR(ierr);
458da3a660dSBarry Smith   ierr = VecScatterEnd(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx);
459da3a660dSBarry Smith   CHKERR(ierr);
460da3a660dSBarry Smith   ierr = MatMultAdd(aij->B,aij->lvec,zz,zz); CHKERR(ierr);
461da3a660dSBarry Smith   return 0;
462da3a660dSBarry Smith }
463da3a660dSBarry Smith 
46444a69424SLois Curfman McInnes static int MatMultTrans_MPIAIJ(Mat aijin,Vec xx,Vec yy)
465da3a660dSBarry Smith {
46644a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
467da3a660dSBarry Smith   int        ierr;
468da3a660dSBarry Smith 
46944a69424SLois Curfman McInnes   if (!aij->assembled)
47044a69424SLois Curfman McInnes     SETERR(1,"MatMulTrans_MPIAIJ: must assemble matrix first");
471da3a660dSBarry Smith   /* do nondiagonal part */
472da3a660dSBarry Smith   ierr = MatMultTrans(aij->B,xx,aij->lvec); CHKERR(ierr);
473da3a660dSBarry Smith   /* send it on its way */
474da3a660dSBarry Smith   ierr = VecScatterBegin(aij->lvec,0,yy,0,AddValues,
475da3a660dSBarry Smith                          ScatterAll|ScatterReverse,aij->Mvctx); CHKERR(ierr);
476da3a660dSBarry Smith   /* do local part */
477da3a660dSBarry Smith   ierr = MatMultTrans(aij->A,xx,yy); CHKERR(ierr);
478da3a660dSBarry Smith   /* receive remote parts: note this assumes the values are not actually */
479da3a660dSBarry Smith   /* inserted in yy until the next line, which is true for my implementation*/
480da3a660dSBarry Smith   /* but is not perhaps always true. */
481da3a660dSBarry Smith   ierr = VecScatterEnd(aij->lvec,0,yy,0,AddValues,ScatterAll|ScatterReverse,
482da3a660dSBarry Smith                          aij->Mvctx); CHKERR(ierr);
483da3a660dSBarry Smith   return 0;
484da3a660dSBarry Smith }
485da3a660dSBarry Smith 
48644a69424SLois Curfman McInnes static int MatMultTransAdd_MPIAIJ(Mat aijin,Vec xx,Vec yy,Vec zz)
487da3a660dSBarry Smith {
48844a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
489da3a660dSBarry Smith   int        ierr;
490da3a660dSBarry Smith 
49144a69424SLois Curfman McInnes   if (!aij->assembled)
49244a69424SLois Curfman McInnes     SETERR(1,"MatMulTransAdd_MPIAIJ: must assemble matrix first");
493da3a660dSBarry Smith   /* do nondiagonal part */
494da3a660dSBarry Smith   ierr = MatMultTrans(aij->B,xx,aij->lvec); CHKERR(ierr);
495da3a660dSBarry Smith   /* send it on its way */
496da3a660dSBarry Smith   ierr = VecScatterBegin(aij->lvec,0,zz,0,AddValues,
497da3a660dSBarry Smith                          ScatterAll|ScatterReverse,aij->Mvctx); CHKERR(ierr);
498da3a660dSBarry Smith   /* do local part */
499da3a660dSBarry Smith   ierr = MatMultTransAdd(aij->A,xx,yy,zz); CHKERR(ierr);
500da3a660dSBarry Smith   /* receive remote parts: note this assumes the values are not actually */
501da3a660dSBarry Smith   /* inserted in yy until the next line, which is true for my implementation*/
502da3a660dSBarry Smith   /* but is not perhaps always true. */
503da3a660dSBarry Smith   ierr = VecScatterEnd(aij->lvec,0,zz,0,AddValues,ScatterAll|ScatterReverse,
504da3a660dSBarry Smith                          aij->Mvctx); CHKERR(ierr);
505da3a660dSBarry Smith   return 0;
506da3a660dSBarry Smith }
507da3a660dSBarry Smith 
5081eb62cbbSBarry Smith /*
5091eb62cbbSBarry Smith   This only works correctly for square matrices where the subblock A->A is the
5101eb62cbbSBarry Smith    diagonal block
5111eb62cbbSBarry Smith */
51244a69424SLois Curfman McInnes static int MatGetDiag_MPIAIJ(Mat Ain,Vec v)
5131eb62cbbSBarry Smith {
51444a69424SLois Curfman McInnes   Mat_MPIAIJ *A = (Mat_MPIAIJ *) Ain->data;
51544a69424SLois Curfman McInnes   if (!A->assembled) SETERR(1,"MatGetDiag_MPIAIJ: must assemble matrix first");
5161eb62cbbSBarry Smith   return MatGetDiagonal(A->A,v);
5171eb62cbbSBarry Smith }
5181eb62cbbSBarry Smith 
51944a69424SLois Curfman McInnes static int MatDestroy_MPIAIJ(PetscObject obj)
5201eb62cbbSBarry Smith {
5211eb62cbbSBarry Smith   Mat        mat = (Mat) obj;
52244a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
5231eb62cbbSBarry Smith   int        ierr;
524a5a9c739SBarry Smith #if defined(PETSC_LOG)
525a5a9c739SBarry Smith   PLogObjectState(obj,"Rows %d Cols %d",aij->M,aij->N);
526a5a9c739SBarry Smith #endif
5271eb62cbbSBarry Smith   FREE(aij->rowners);
5281eb62cbbSBarry Smith   ierr = MatDestroy(aij->A); CHKERR(ierr);
5291eb62cbbSBarry Smith   ierr = MatDestroy(aij->B); CHKERR(ierr);
5309e25ed09SBarry Smith   if (aij->colmap) FREE(aij->colmap);
5319e25ed09SBarry Smith   if (aij->garray) FREE(aij->garray);
5321eb62cbbSBarry Smith   if (aij->lvec) VecDestroy(aij->lvec);
5331eb62cbbSBarry Smith   if (aij->Mvctx) VecScatterCtxDestroy(aij->Mvctx);
534a5a9c739SBarry Smith   FREE(aij);
535a5a9c739SBarry Smith   PLogObjectDestroy(mat);
536a5a9c739SBarry Smith   PETSCHEADERDESTROY(mat);
5371eb62cbbSBarry Smith   return 0;
5381eb62cbbSBarry Smith }
5391eb62cbbSBarry Smith 
54044a69424SLois Curfman McInnes static int MatView_MPIAIJ(PetscObject obj,Viewer viewer)
5411eb62cbbSBarry Smith {
5421eb62cbbSBarry Smith   Mat        mat = (Mat) obj;
54344a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
5441eb62cbbSBarry Smith   int        ierr;
545d13ab20cSBarry Smith   PetscObject vobj = (PetscObject) viewer;
5461eb62cbbSBarry Smith 
54744a69424SLois Curfman McInnes   if (!aij->assembled) SETERR(1,"MatView_MPIAIJ: must assemble matrix first");
548d13ab20cSBarry Smith   if (vobj->cookie == VIEWER_COOKIE) {
549d13ab20cSBarry Smith     FILE *fd = ViewerFileGetPointer(viewer);
550d13ab20cSBarry Smith     if (vobj->type == FILE_VIEWER) {
551d6dfbf8fSBarry Smith       MPE_Seq_begin(mat->comm,1);
552d13ab20cSBarry Smith       fprintf(fd,"[%d] rows %d starts %d ends %d cols %d starts %d ends %d\n",
5531eb62cbbSBarry Smith              aij->mytid,aij->m,aij->rstart,aij->rend,aij->n,aij->cstart,
5541eb62cbbSBarry Smith              aij->cend);
555da69df5fSBarry Smith       ierr = MatView(aij->A,viewer); CHKERR(ierr);
556da69df5fSBarry Smith       ierr = MatView(aij->B,viewer); CHKERR(ierr);
557d13ab20cSBarry Smith       fflush(fd);
558d6dfbf8fSBarry Smith       MPE_Seq_end(mat->comm,1);
559d13ab20cSBarry Smith     }
560d13ab20cSBarry Smith   }
5611eb62cbbSBarry Smith   return 0;
5621eb62cbbSBarry Smith }
5631eb62cbbSBarry Smith 
564d3c9fed9SLois Curfman McInnes extern int MatMarkDiag_AIJ(Mat_AIJ  *);
5651eb62cbbSBarry Smith /*
5661eb62cbbSBarry Smith     This has to provide several versions.
5671eb62cbbSBarry Smith 
5681eb62cbbSBarry Smith      1) per sequential
5691eb62cbbSBarry Smith      2) a) use only local smoothing updating outer values only once.
5701eb62cbbSBarry Smith         b) local smoothing updating outer values each inner iteration
571d6dfbf8fSBarry Smith      3) color updating out values betwen colors.
5721eb62cbbSBarry Smith */
57344a69424SLois Curfman McInnes static int MatRelax_MPIAIJ(Mat matin,Vec bb,double omega,int flag,double shift,
5748a729477SBarry Smith                         int its,Vec xx)
5758a729477SBarry Smith {
57644a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
577d6dfbf8fSBarry Smith   Mat        AA = mat->A, BB = mat->B;
57844a69424SLois Curfman McInnes   Mat_AIJ    *A = (Mat_AIJ *) AA->data, *B = (Mat_AIJ *)BB->data;
5796abc6512SBarry Smith   Scalar     zero = 0.0,*b,*x,*xs,*ls,d,*v,sum,scale,*t,*ts;
5806abc6512SBarry Smith   int        ierr,*idx, *diag;
5816abc6512SBarry Smith   int        n = mat->n, m = mat->m, i;
582da3a660dSBarry Smith   Vec        tt;
5838a729477SBarry Smith 
58444a69424SLois Curfman McInnes   if (!mat->assembled) SETERR(1,"MatRelax_MPIAIJ: must assemble matrix first");
5851eb62cbbSBarry Smith 
586d6dfbf8fSBarry Smith   VecGetArray(xx,&x); VecGetArray(bb,&b); VecGetArray(mat->lvec,&ls);
587d6dfbf8fSBarry Smith   xs = x -1; /* shift by one for index start of 1 */
588da3a660dSBarry Smith   ls--;
589d3c9fed9SLois Curfman McInnes   if (!A->diag) {if ((ierr = MatMarkDiag_AIJ(A))) return ierr;}
590d6dfbf8fSBarry Smith   diag = A->diag;
591acb40c82SBarry Smith   if (flag == SOR_APPLY_UPPER || flag == SOR_APPLY_LOWER) {
592acb40c82SBarry Smith     SETERR(1,"That option not yet support for parallel AIJ matrices");
593acb40c82SBarry Smith   }
594da3a660dSBarry Smith   if (flag & SOR_EISENSTAT) {
595da3a660dSBarry Smith     /* Let  A = L + U + D; where L is lower trianglar,
596da3a660dSBarry Smith     U is upper triangular, E is diagonal; This routine applies
597da3a660dSBarry Smith 
598da3a660dSBarry Smith             (L + E)^{-1} A (U + E)^{-1}
599da3a660dSBarry Smith 
600da3a660dSBarry Smith     to a vector efficiently using Eisenstat's trick. This is for
601da3a660dSBarry Smith     the case of SSOR preconditioner, so E is D/omega where omega
602da3a660dSBarry Smith     is the relaxation factor.
603da3a660dSBarry Smith     */
604da3a660dSBarry Smith     ierr = VecCreate(xx,&tt); CHKERR(ierr);
605da3a660dSBarry Smith     VecGetArray(tt,&t);
606da3a660dSBarry Smith     scale = (2.0/omega) - 1.0;
607da3a660dSBarry Smith     /*  x = (E + U)^{-1} b */
608da3a660dSBarry Smith     VecSet(&zero,mat->lvec);
609da3a660dSBarry Smith     ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp,
610da3a660dSBarry Smith                               mat->Mvctx); CHKERR(ierr);
611da3a660dSBarry Smith     for ( i=m-1; i>-1; i-- ) {
612da3a660dSBarry Smith       n    = A->i[i+1] - diag[i] - 1;
613da3a660dSBarry Smith       idx  = A->j + diag[i];
614da3a660dSBarry Smith       v    = A->a + diag[i];
615da3a660dSBarry Smith       sum  = b[i];
616da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,xs,v,idx,n);
617da3a660dSBarry Smith       d    = shift + A->a[diag[i]-1];
618da3a660dSBarry Smith       n    = B->i[i+1] - B->i[i];
619da3a660dSBarry Smith       idx  = B->j + B->i[i] - 1;
620da3a660dSBarry Smith       v    = B->a + B->i[i] - 1;
621da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,ls,v,idx,n);
622da3a660dSBarry Smith       x[i] = omega*(sum/d);
623da3a660dSBarry Smith     }
624da3a660dSBarry Smith     ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp,
625da3a660dSBarry Smith                             mat->Mvctx); CHKERR(ierr);
626da3a660dSBarry Smith 
627da3a660dSBarry Smith     /*  t = b - (2*E - D)x */
628da3a660dSBarry Smith     v = A->a;
629da3a660dSBarry Smith     for ( i=0; i<m; i++ ) { t[i] = b[i] - scale*(v[*diag++ - 1])*x[i]; }
630da3a660dSBarry Smith 
631da3a660dSBarry Smith     /*  t = (E + L)^{-1}t */
632da3a660dSBarry Smith     ts = t - 1; /* shifted by one for index start of a or mat->j*/
633da3a660dSBarry Smith     diag = A->diag;
634da3a660dSBarry Smith     VecSet(&zero,mat->lvec);
635da3a660dSBarry Smith     ierr = VecPipelineBegin(tt,0,mat->lvec,0,InsertValues,PipelineDown,
636da3a660dSBarry Smith                                                  mat->Mvctx); CHKERR(ierr);
637da3a660dSBarry Smith     for ( i=0; i<m; i++ ) {
638da3a660dSBarry Smith       n    = diag[i] - A->i[i];
639da3a660dSBarry Smith       idx  = A->j + A->i[i] - 1;
640da3a660dSBarry Smith       v    = A->a + A->i[i] - 1;
641da3a660dSBarry Smith       sum  = t[i];
642da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,ts,v,idx,n);
643da3a660dSBarry Smith       d    = shift + A->a[diag[i]-1];
644da3a660dSBarry Smith       n    = B->i[i+1] - B->i[i];
645da3a660dSBarry Smith       idx  = B->j + B->i[i] - 1;
646da3a660dSBarry Smith       v    = B->a + B->i[i] - 1;
647da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,ls,v,idx,n);
648da3a660dSBarry Smith       t[i] = omega*(sum/d);
649da3a660dSBarry Smith     }
650da3a660dSBarry Smith     ierr = VecPipelineEnd(tt,0,mat->lvec,0,InsertValues,PipelineDown,
651da3a660dSBarry Smith                                                     mat->Mvctx); CHKERR(ierr);
652da3a660dSBarry Smith     /*  x = x + t */
653da3a660dSBarry Smith     for ( i=0; i<m; i++ ) { x[i] += t[i]; }
654da3a660dSBarry Smith     VecDestroy(tt);
655da3a660dSBarry Smith     return 0;
656da3a660dSBarry Smith   }
657da3a660dSBarry Smith 
6581eb62cbbSBarry Smith 
659d6dfbf8fSBarry Smith   if ((flag & SOR_SYMMETRIC_SWEEP) == SOR_SYMMETRIC_SWEEP){
660da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
661da3a660dSBarry Smith       VecSet(&zero,mat->lvec); VecSet(&zero,xx);
662da3a660dSBarry Smith     }
663da3a660dSBarry Smith     else {
664d6dfbf8fSBarry Smith       ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx);
665d6dfbf8fSBarry Smith       CHKERR(ierr);
666d6dfbf8fSBarry Smith       ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx);
667d6dfbf8fSBarry Smith       CHKERR(ierr);
668da3a660dSBarry Smith     }
669d6dfbf8fSBarry Smith     while (its--) {
670d6dfbf8fSBarry Smith       /* go down through the rows */
671d6dfbf8fSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown,
672d6dfbf8fSBarry Smith                               mat->Mvctx); CHKERR(ierr);
673d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
674d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
675d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
676d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
677d6dfbf8fSBarry Smith         sum  = b[i];
678d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
679d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
680d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
681d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
682d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
683d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
684d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
685d6dfbf8fSBarry Smith       }
686d6dfbf8fSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown,
687d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
688d6dfbf8fSBarry Smith       /* come up through the rows */
689d6dfbf8fSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp,
690d6dfbf8fSBarry Smith                               mat->Mvctx); CHKERR(ierr);
691d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
692d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
693d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
694d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
695d6dfbf8fSBarry Smith         sum  = b[i];
696d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
697d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
698d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
699d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
700d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
701d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
702d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
703d6dfbf8fSBarry Smith       }
704d6dfbf8fSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp,
705d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
706d6dfbf8fSBarry Smith     }
707d6dfbf8fSBarry Smith   }
708d6dfbf8fSBarry Smith   else if (flag & SOR_FORWARD_SWEEP){
709da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
710da3a660dSBarry Smith       VecSet(&zero,mat->lvec);
711da3a660dSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown,
712da3a660dSBarry Smith                               mat->Mvctx); CHKERR(ierr);
713da3a660dSBarry Smith       for ( i=0; i<m; i++ ) {
714da3a660dSBarry Smith         n    = diag[i] - A->i[i];
715da3a660dSBarry Smith         idx  = A->j + A->i[i] - 1;
716da3a660dSBarry Smith         v    = A->a + A->i[i] - 1;
717da3a660dSBarry Smith         sum  = b[i];
718da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
719da3a660dSBarry Smith         d    = shift + A->a[diag[i]-1];
720da3a660dSBarry Smith         n    = B->i[i+1] - B->i[i];
721da3a660dSBarry Smith         idx  = B->j + B->i[i] - 1;
722da3a660dSBarry Smith         v    = B->a + B->i[i] - 1;
723da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
724da3a660dSBarry Smith         x[i] = omega*(sum/d);
725da3a660dSBarry Smith       }
726da3a660dSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown,
727da3a660dSBarry Smith                             mat->Mvctx); CHKERR(ierr);
728da3a660dSBarry Smith       its--;
729da3a660dSBarry Smith     }
730d6dfbf8fSBarry Smith     while (its--) {
731d6dfbf8fSBarry Smith       ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx);
732d6dfbf8fSBarry Smith       CHKERR(ierr);
733d6dfbf8fSBarry Smith       ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx);
734d6dfbf8fSBarry Smith       CHKERR(ierr);
735d6dfbf8fSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown,
736d6dfbf8fSBarry Smith                               mat->Mvctx); CHKERR(ierr);
737d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
738d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
739d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
740d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
741d6dfbf8fSBarry Smith         sum  = b[i];
742d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
743d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
744d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
745d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
746d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
747d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
748d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
749d6dfbf8fSBarry Smith       }
750d6dfbf8fSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown,
751d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
752d6dfbf8fSBarry Smith     }
753d6dfbf8fSBarry Smith   }
754d6dfbf8fSBarry Smith   else if (flag & SOR_BACKWARD_SWEEP){
755da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
756da3a660dSBarry Smith       VecSet(&zero,mat->lvec);
757da3a660dSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp,
758da3a660dSBarry Smith                               mat->Mvctx); CHKERR(ierr);
759da3a660dSBarry Smith       for ( i=m-1; i>-1; i-- ) {
760da3a660dSBarry Smith         n    = A->i[i+1] - diag[i] - 1;
761da3a660dSBarry Smith         idx  = A->j + diag[i];
762da3a660dSBarry Smith         v    = A->a + diag[i];
763da3a660dSBarry Smith         sum  = b[i];
764da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
765da3a660dSBarry Smith         d    = shift + A->a[diag[i]-1];
766da3a660dSBarry Smith         n    = B->i[i+1] - B->i[i];
767da3a660dSBarry Smith         idx  = B->j + B->i[i] - 1;
768da3a660dSBarry Smith         v    = B->a + B->i[i] - 1;
769da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
770da3a660dSBarry Smith         x[i] = omega*(sum/d);
771da3a660dSBarry Smith       }
772da3a660dSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp,
773da3a660dSBarry Smith                             mat->Mvctx); CHKERR(ierr);
774da3a660dSBarry Smith       its--;
775da3a660dSBarry Smith     }
776d6dfbf8fSBarry Smith     while (its--) {
777d6dfbf8fSBarry Smith       ierr = VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterDown,
778d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
779d6dfbf8fSBarry Smith       ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterDown,
780d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
781d6dfbf8fSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp,
782d6dfbf8fSBarry Smith                               mat->Mvctx); CHKERR(ierr);
783d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
784d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
785d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
786d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
787d6dfbf8fSBarry Smith         sum  = b[i];
788d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
789d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
790d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
791d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
792d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
793d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
794d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
795d6dfbf8fSBarry Smith       }
796d6dfbf8fSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp,
797d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
798d6dfbf8fSBarry Smith     }
799d6dfbf8fSBarry Smith   }
800d6dfbf8fSBarry Smith   else if ((flag & SOR_LOCAL_SYMMETRIC_SWEEP) == SOR_LOCAL_SYMMETRIC_SWEEP){
801da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
802da3a660dSBarry Smith       return MatRelax(mat->A,bb,omega,flag,shift,its,xx);
803da3a660dSBarry Smith     }
804d6dfbf8fSBarry Smith     ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx);
805d6dfbf8fSBarry Smith     CHKERR(ierr);
806d6dfbf8fSBarry Smith     ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx);
807d6dfbf8fSBarry Smith     CHKERR(ierr);
808d6dfbf8fSBarry Smith     while (its--) {
809d6dfbf8fSBarry Smith       /* go down through the rows */
810d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
811d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
812d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
813d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
814d6dfbf8fSBarry Smith         sum  = b[i];
815d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
816d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
817d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
818d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
819d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
820d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
821d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
822d6dfbf8fSBarry Smith       }
823d6dfbf8fSBarry Smith       /* come up through the rows */
824d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
825d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
826d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
827d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
828d6dfbf8fSBarry Smith         sum  = b[i];
829d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
830d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
831d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
832d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
833d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
834d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
835d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
836d6dfbf8fSBarry Smith       }
837d6dfbf8fSBarry Smith     }
838d6dfbf8fSBarry Smith   }
839d6dfbf8fSBarry Smith   else if (flag & SOR_LOCAL_FORWARD_SWEEP){
840da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
841da3a660dSBarry Smith       return MatRelax(mat->A,bb,omega,flag,shift,its,xx);
842da3a660dSBarry Smith     }
843d6dfbf8fSBarry Smith     ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx);
844d6dfbf8fSBarry Smith     CHKERR(ierr);
845d6dfbf8fSBarry Smith     ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx);
846d6dfbf8fSBarry Smith     CHKERR(ierr);
847d6dfbf8fSBarry Smith     while (its--) {
848d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
849d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
850d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
851d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
852d6dfbf8fSBarry Smith         sum  = b[i];
853d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
854d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
855d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
856d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
857d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
858d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
859d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
860d6dfbf8fSBarry Smith       }
861d6dfbf8fSBarry Smith     }
862d6dfbf8fSBarry Smith   }
863d6dfbf8fSBarry Smith   else if (flag & SOR_LOCAL_BACKWARD_SWEEP){
864da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
865da3a660dSBarry Smith       return MatRelax(mat->A,bb,omega,flag,shift,its,xx);
866da3a660dSBarry Smith     }
867d6dfbf8fSBarry Smith     ierr = VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll,
868d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
869d6dfbf8fSBarry Smith     ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll,
870d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
871d6dfbf8fSBarry Smith     while (its--) {
872d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
873d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
874d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
875d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
876d6dfbf8fSBarry Smith         sum  = b[i];
877d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
878d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
879d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
880d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
881d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
882d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
883d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
884d6dfbf8fSBarry Smith       }
885d6dfbf8fSBarry Smith     }
886d6dfbf8fSBarry Smith   }
8878a729477SBarry Smith   return 0;
8888a729477SBarry Smith }
88944a69424SLois Curfman McInnes static int MatInsOpt_MPIAIJ(Mat aijin,int op)
890c74985f6SBarry Smith {
89144a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
892c74985f6SBarry Smith 
893c74985f6SBarry Smith   if      (op == NO_NEW_NONZERO_LOCATIONS)  {
894c74985f6SBarry Smith     MatSetOption(aij->A,op);
895c74985f6SBarry Smith     MatSetOption(aij->B,op);
896c74985f6SBarry Smith   }
897c74985f6SBarry Smith   else if (op == YES_NEW_NONZERO_LOCATIONS) {
898c74985f6SBarry Smith     MatSetOption(aij->A,op);
899c74985f6SBarry Smith     MatSetOption(aij->B,op);
900c74985f6SBarry Smith   }
901c74985f6SBarry Smith   else if (op == COLUMN_ORIENTED) SETERR(1,"Column oriented not supported");
902c74985f6SBarry Smith   return 0;
903c74985f6SBarry Smith }
904c74985f6SBarry Smith 
90544a69424SLois Curfman McInnes static int MatSize_MPIAIJ(Mat matin,int *m,int *n)
906c74985f6SBarry Smith {
90744a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
908c74985f6SBarry Smith   *m = mat->M; *n = mat->N;
909c74985f6SBarry Smith   return 0;
910c74985f6SBarry Smith }
911c74985f6SBarry Smith 
91244a69424SLois Curfman McInnes static int MatLocalSize_MPIAIJ(Mat matin,int *m,int *n)
913c74985f6SBarry Smith {
91444a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
915c74985f6SBarry Smith   *m = mat->m; *n = mat->n;
916c74985f6SBarry Smith   return 0;
917c74985f6SBarry Smith }
918c74985f6SBarry Smith 
91944a69424SLois Curfman McInnes static int MatRange_MPIAIJ(Mat matin,int *m,int *n)
920c74985f6SBarry Smith {
92144a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
922c74985f6SBarry Smith   *m = mat->rstart; *n = mat->rend;
923c74985f6SBarry Smith   return 0;
924c74985f6SBarry Smith }
925c74985f6SBarry Smith 
92639e00950SLois Curfman McInnes static int MatGetRow_MPIAIJ(Mat matin,int row,int *nz,int **idx,Scalar **v)
92739e00950SLois Curfman McInnes {
92839e00950SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) matin->data;
92939e00950SLois Curfman McInnes   Scalar     *vworkA, *vworkB;
930*abc0e9e4SLois Curfman McInnes   int        ierr, *cworkA, *cworkB, lrow, cstart = aij->cstart;
93139e00950SLois Curfman McInnes   int        nztot, nzA, nzB, i, rstart = aij->rstart, rend = aij->rend;
93239e00950SLois Curfman McInnes 
93339e00950SLois Curfman McInnes   if (!aij->assembled)
93439e00950SLois Curfman McInnes     SETERR(1,"MatGetRow_MPIAIJ: Must assemble matrix first.");
93539e00950SLois Curfman McInnes   if (row < rstart || row >= rend)
936*abc0e9e4SLois Curfman McInnes     SETERR(1,"MatGetRow_MPIAIJ: Currently you can get only local rows.")
937*abc0e9e4SLois Curfman McInnes   lrow = row - rstart;
938*abc0e9e4SLois Curfman McInnes   ierr = MatGetRow(aij->A,lrow,&nzA,&cworkA,&vworkA); CHKERR(ierr);
93939e00950SLois Curfman McInnes   for (i=0; i<nzA; i++) cworkA[i] += cstart;
940*abc0e9e4SLois Curfman McInnes   ierr = MatGetRow(aij->B,lrow,&nzB,&cworkB,&vworkB); CHKERR(ierr);
941*abc0e9e4SLois Curfman McInnes   for (i=0; i<nzB; i++) cworkB[i] = aij->garray[cworkB[i]];
94239e00950SLois Curfman McInnes 
94339e00950SLois Curfman McInnes   if (nztot = nzA + nzB) {
94439e00950SLois Curfman McInnes     *idx = (int *) MALLOC( (nztot)*sizeof(int) ); CHKPTR(*idx);
94539e00950SLois Curfman McInnes     *v   = (Scalar *) MALLOC( (nztot)*sizeof(Scalar) ); CHKPTR(*v);
94639e00950SLois Curfman McInnes     for ( i=0; i<nzA; i++ ) {
94739e00950SLois Curfman McInnes       (*idx)[i] = cworkA[i];
94839e00950SLois Curfman McInnes       (*v)[i] = vworkA[i];
94939e00950SLois Curfman McInnes     }
95039e00950SLois Curfman McInnes     for ( i=0; i<nzB; i++ ) {
95139e00950SLois Curfman McInnes       (*idx)[i+nzA] = cworkB[i];
952*abc0e9e4SLois Curfman McInnes       (*v)[i+nzA] = vworkB[i];
95339e00950SLois Curfman McInnes     }
95439e00950SLois Curfman McInnes   }
95539e00950SLois Curfman McInnes   else {*idx = 0; *v=0;}
95639e00950SLois Curfman McInnes   *nz = nztot;
957*abc0e9e4SLois Curfman McInnes   ierr = MatRestoreRow(aij->A,lrow,&nzA,&cworkA,&vworkA); CHKERR(ierr);
958*abc0e9e4SLois Curfman McInnes   ierr = MatRestoreRow(aij->B,lrow,&nzB,&cworkB,&vworkB); CHKERR(ierr);
95939e00950SLois Curfman McInnes   return 0;
96039e00950SLois Curfman McInnes }
96139e00950SLois Curfman McInnes 
96239e00950SLois Curfman McInnes static int MatRestoreRow_MPIAIJ(Mat mat,int row,int *nz,int **idx,Scalar **v)
96339e00950SLois Curfman McInnes {
96439e00950SLois Curfman McInnes   if (*idx) FREE(*idx);
96539e00950SLois Curfman McInnes   if (*v) FREE(*v);
96639e00950SLois Curfman McInnes   return 0;
96739e00950SLois Curfman McInnes }
96839e00950SLois Curfman McInnes 
96944a69424SLois Curfman McInnes static int MatCopy_MPIAIJ(Mat,Mat *);
97044a69424SLois Curfman McInnes extern int MatConvert_MPIAIJ(Mat,MATTYPE,Mat *);
971d6dfbf8fSBarry Smith 
9728a729477SBarry Smith /* -------------------------------------------------------------------*/
97344a69424SLois Curfman McInnes static struct _MatOps MatOps = {MatInsertValues_MPIAIJ,
97439e00950SLois Curfman McInnes        MatGetRow_MPIAIJ,MatRestoreRow_MPIAIJ,
97544a69424SLois Curfman McInnes        MatMult_MPIAIJ,MatMultAdd_MPIAIJ,
97644a69424SLois Curfman McInnes        MatMultTrans_MPIAIJ,MatMultTransAdd_MPIAIJ,
9771eb62cbbSBarry Smith        0,0,0,0,
9788a729477SBarry Smith        0,0,
97944a69424SLois Curfman McInnes        MatRelax_MPIAIJ,
9808a729477SBarry Smith        0,
9811eb62cbbSBarry Smith        0,0,0,
98244a69424SLois Curfman McInnes        MatCopy_MPIAIJ,
98344a69424SLois Curfman McInnes        MatGetDiag_MPIAIJ,0,0,
98444a69424SLois Curfman McInnes        MatBeginAssemble_MPIAIJ,MatEndAssemble_MPIAIJ,
9851eb62cbbSBarry Smith        0,
98644a69424SLois Curfman McInnes        MatInsOpt_MPIAIJ,MatZero_MPIAIJ,MatZeroRows_MPIAIJ,0,
987c74985f6SBarry Smith        0,0,0,0,
98844a69424SLois Curfman McInnes        MatSize_MPIAIJ,MatLocalSize_MPIAIJ,MatRange_MPIAIJ,
98977915d1cSLois Curfman McInnes        0,0,
99044a69424SLois Curfman McInnes        0,MatConvert_MPIAIJ };
9918a729477SBarry Smith 
9928a729477SBarry Smith /*@
9938a729477SBarry Smith 
9941eb62cbbSBarry Smith       MatCreateMPIAIJ - Creates a sparse parallel matrix
9951eb62cbbSBarry Smith                                  in AIJ format.
9968a729477SBarry Smith 
9978a729477SBarry Smith   Input Parameters:
9981eb62cbbSBarry Smith .   comm - MPI communicator
9991eb62cbbSBarry Smith .   m,n - number of local rows and columns (or -1 to have calculated)
10001eb62cbbSBarry Smith .   M,N - global rows and columns (or -1 to have calculated)
10011eb62cbbSBarry Smith .   d_nz - total number nonzeros in diagonal portion of matrix
10021eb62cbbSBarry Smith .   d_nzz - number of nonzeros per row in diagonal portion of matrix or null
10038a729477SBarry Smith .           You must leave room for the diagonal entry even if it is zero.
10041eb62cbbSBarry Smith .   o_nz - total number nonzeros in off-diagonal portion of matrix
10051eb62cbbSBarry Smith .   o_nzz - number of nonzeros per row in off-diagonal portion of matrix
10061eb62cbbSBarry Smith .           or null. You must have at least one nonzero per row.
10078a729477SBarry Smith 
10088a729477SBarry Smith   Output parameters:
10098a729477SBarry Smith .  newmat - the matrix
10108a729477SBarry Smith 
10111eb62cbbSBarry Smith   Keywords: matrix, aij, compressed row, sparse, parallel
10128a729477SBarry Smith @*/
10131eb62cbbSBarry Smith int MatCreateMPIAIJ(MPI_Comm comm,int m,int n,int M,int N,
10141eb62cbbSBarry Smith                  int d_nz,int *d_nnz, int o_nz,int *o_nnz,Mat *newmat)
10158a729477SBarry Smith {
10168a729477SBarry Smith   Mat          mat;
101744a69424SLois Curfman McInnes   Mat_MPIAIJ   *aij;
10186abc6512SBarry Smith   int          ierr, i,sum[2],work[2];
10198a729477SBarry Smith   *newmat         = 0;
102044a69424SLois Curfman McInnes   PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATMPIAIJ,comm);
1021a5a9c739SBarry Smith   PLogObjectCreate(mat);
102244a69424SLois Curfman McInnes   mat->data       = (void *) (aij = NEW(Mat_MPIAIJ)); CHKPTR(aij);
10238a729477SBarry Smith   mat->ops        = &MatOps;
102444a69424SLois Curfman McInnes   mat->destroy    = MatDestroy_MPIAIJ;
102544a69424SLois Curfman McInnes   mat->view       = MatView_MPIAIJ;
10268a729477SBarry Smith   mat->factor     = 0;
10278a729477SBarry Smith   mat->row        = 0;
10288a729477SBarry Smith   mat->col        = 0;
1029d6dfbf8fSBarry Smith 
1030d6dfbf8fSBarry Smith   mat->comm       = comm;
10311eb62cbbSBarry Smith   aij->insertmode = NotSetValues;
10321eb62cbbSBarry Smith   MPI_Comm_rank(comm,&aij->mytid);
10331eb62cbbSBarry Smith   MPI_Comm_size(comm,&aij->numtids);
10341eb62cbbSBarry Smith 
10351eb62cbbSBarry Smith   if (M == -1 || N == -1) {
10361eb62cbbSBarry Smith     work[0] = m; work[1] = n;
1037d6dfbf8fSBarry Smith     MPI_Allreduce((void *) work,(void *) sum,2,MPI_INT,MPI_SUM,comm );
10381eb62cbbSBarry Smith     if (M == -1) M = sum[0];
10391eb62cbbSBarry Smith     if (N == -1) N = sum[1];
10401eb62cbbSBarry Smith   }
10411eb62cbbSBarry Smith   if (m == -1) {m = M/aij->numtids + ((M % aij->numtids) > aij->mytid);}
10421eb62cbbSBarry Smith   if (n == -1) {n = N/aij->numtids + ((N % aij->numtids) > aij->mytid);}
10438a729477SBarry Smith   aij->m       = m;
10448a729477SBarry Smith   aij->n       = n;
10451eb62cbbSBarry Smith   aij->N       = N;
10461eb62cbbSBarry Smith   aij->M       = M;
10471eb62cbbSBarry Smith 
10481eb62cbbSBarry Smith   /* build local table of row and column ownerships */
10491eb62cbbSBarry Smith   aij->rowners = (int *) MALLOC(2*(aij->numtids+2)*sizeof(int));
10501eb62cbbSBarry Smith   CHKPTR(aij->rowners);
10511eb62cbbSBarry Smith   aij->cowners = aij->rowners + aij->numtids + 1;
10521eb62cbbSBarry Smith   MPI_Allgather(&m,1,MPI_INT,aij->rowners+1,1,MPI_INT,comm);
10531eb62cbbSBarry Smith   aij->rowners[0] = 0;
10541eb62cbbSBarry Smith   for ( i=2; i<=aij->numtids; i++ ) {
10551eb62cbbSBarry Smith     aij->rowners[i] += aij->rowners[i-1];
10568a729477SBarry Smith   }
10571eb62cbbSBarry Smith   aij->rstart = aij->rowners[aij->mytid];
10581eb62cbbSBarry Smith   aij->rend   = aij->rowners[aij->mytid+1];
10591eb62cbbSBarry Smith   MPI_Allgather(&n,1,MPI_INT,aij->cowners+1,1,MPI_INT,comm);
10601eb62cbbSBarry Smith   aij->cowners[0] = 0;
10611eb62cbbSBarry Smith   for ( i=2; i<=aij->numtids; i++ ) {
10621eb62cbbSBarry Smith     aij->cowners[i] += aij->cowners[i-1];
10638a729477SBarry Smith   }
10641eb62cbbSBarry Smith   aij->cstart = aij->cowners[aij->mytid];
10651eb62cbbSBarry Smith   aij->cend   = aij->cowners[aij->mytid+1];
10668a729477SBarry Smith 
10678a729477SBarry Smith 
10681eb62cbbSBarry Smith   ierr = MatCreateSequentialAIJ(m,n,d_nz,d_nnz,&aij->A); CHKERR(ierr);
1069a5a9c739SBarry Smith   PLogObjectParent(mat,aij->A);
10701eb62cbbSBarry Smith   ierr = MatCreateSequentialAIJ(m,N,o_nz,o_nnz,&aij->B); CHKERR(ierr);
1071a5a9c739SBarry Smith   PLogObjectParent(mat,aij->B);
10728a729477SBarry Smith 
10731eb62cbbSBarry Smith   /* build cache for off array entries formed */
10741eb62cbbSBarry Smith   aij->stash.nmax = CHUNCKSIZE; /* completely arbratray number */
10751eb62cbbSBarry Smith   aij->stash.n    = 0;
10761eb62cbbSBarry Smith   aij->stash.array = (Scalar *) MALLOC( aij->stash.nmax*(2*sizeof(int) +
10771eb62cbbSBarry Smith                             sizeof(Scalar))); CHKPTR(aij->stash.array);
10781eb62cbbSBarry Smith   aij->stash.idx = (int *) (aij->stash.array + aij->stash.nmax);
10791eb62cbbSBarry Smith   aij->stash.idy = (int *) (aij->stash.idx + aij->stash.nmax);
10809e25ed09SBarry Smith   aij->colmap    = 0;
10819e25ed09SBarry Smith   aij->garray    = 0;
10828a729477SBarry Smith 
10831eb62cbbSBarry Smith   /* stuff used for matrix vector multiply */
10841eb62cbbSBarry Smith   aij->lvec      = 0;
10851eb62cbbSBarry Smith   aij->Mvctx     = 0;
1086d6dfbf8fSBarry Smith   aij->assembled = 0;
10878a729477SBarry Smith 
1088d6dfbf8fSBarry Smith   *newmat = mat;
1089d6dfbf8fSBarry Smith   return 0;
1090d6dfbf8fSBarry Smith }
1091c74985f6SBarry Smith 
109244a69424SLois Curfman McInnes static int MatCopy_MPIAIJ(Mat matin,Mat *newmat)
1093d6dfbf8fSBarry Smith {
1094d6dfbf8fSBarry Smith   Mat        mat;
109544a69424SLois Curfman McInnes   Mat_MPIAIJ *aij,*oldmat = (Mat_MPIAIJ *) matin->data;
10966abc6512SBarry Smith   int        ierr;
1097d6dfbf8fSBarry Smith   *newmat      = 0;
1098d6dfbf8fSBarry Smith 
1099d6dfbf8fSBarry Smith   if (!oldmat->assembled) SETERR(1,"Cannot copy unassembled matrix");
110044a69424SLois Curfman McInnes   PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATMPIAIJ,matin->comm);
1101a5a9c739SBarry Smith   PLogObjectCreate(mat);
110244a69424SLois Curfman McInnes   mat->data       = (void *) (aij = NEW(Mat_MPIAIJ)); CHKPTR(aij);
1103d6dfbf8fSBarry Smith   mat->ops        = &MatOps;
110444a69424SLois Curfman McInnes   mat->destroy    = MatDestroy_MPIAIJ;
110544a69424SLois Curfman McInnes   mat->view       = MatView_MPIAIJ;
1106d6dfbf8fSBarry Smith   mat->factor     = matin->factor;
1107d6dfbf8fSBarry Smith   mat->row        = 0;
1108d6dfbf8fSBarry Smith   mat->col        = 0;
1109d6dfbf8fSBarry Smith 
1110d6dfbf8fSBarry Smith   aij->m          = oldmat->m;
1111d6dfbf8fSBarry Smith   aij->n          = oldmat->n;
1112d6dfbf8fSBarry Smith   aij->M          = oldmat->M;
1113d6dfbf8fSBarry Smith   aij->N          = oldmat->N;
1114d6dfbf8fSBarry Smith 
1115d6dfbf8fSBarry Smith   aij->assembled  = 1;
1116d6dfbf8fSBarry Smith   aij->rstart     = oldmat->rstart;
1117d6dfbf8fSBarry Smith   aij->rend       = oldmat->rend;
1118d6dfbf8fSBarry Smith   aij->cstart     = oldmat->cstart;
1119d6dfbf8fSBarry Smith   aij->cend       = oldmat->cend;
1120d6dfbf8fSBarry Smith   aij->numtids    = oldmat->numtids;
1121d6dfbf8fSBarry Smith   aij->mytid      = oldmat->mytid;
1122d6dfbf8fSBarry Smith   aij->insertmode = NotSetValues;
1123d6dfbf8fSBarry Smith 
1124d6dfbf8fSBarry Smith   aij->rowners    = (int *) MALLOC( (aij->numtids+1)*sizeof(int) );
1125d6dfbf8fSBarry Smith   CHKPTR(aij->rowners);
1126d6dfbf8fSBarry Smith   MEMCPY(aij->rowners,oldmat->rowners,(aij->numtids+1)*sizeof(int));
1127d6dfbf8fSBarry Smith   aij->stash.nmax = 0;
1128d6dfbf8fSBarry Smith   aij->stash.n    = 0;
1129d6dfbf8fSBarry Smith   aij->stash.array= 0;
11309e25ed09SBarry Smith   aij->colmap     = 0;
11319e25ed09SBarry Smith   aij->garray     = 0;
1132d6dfbf8fSBarry Smith   mat->comm       = matin->comm;
1133d6dfbf8fSBarry Smith 
1134d6dfbf8fSBarry Smith   ierr =  VecCreate(oldmat->lvec,&aij->lvec); CHKERR(ierr);
1135a5a9c739SBarry Smith   PLogObjectParent(mat,aij->lvec);
1136d6dfbf8fSBarry Smith   ierr =  VecScatterCtxCopy(oldmat->Mvctx,&aij->Mvctx); CHKERR(ierr);
1137a5a9c739SBarry Smith   PLogObjectParent(mat,aij->Mvctx);
1138d6dfbf8fSBarry Smith   ierr =  MatCopy(oldmat->A,&aij->A); CHKERR(ierr);
1139a5a9c739SBarry Smith   PLogObjectParent(mat,aij->A);
1140d6dfbf8fSBarry Smith   ierr =  MatCopy(oldmat->B,&aij->B); CHKERR(ierr);
1141a5a9c739SBarry Smith   PLogObjectParent(mat,aij->B);
11428a729477SBarry Smith   *newmat = mat;
11438a729477SBarry Smith   return 0;
11448a729477SBarry Smith }
1145