xref: /petsc/src/mat/impls/aij/mpi/mpiaij.c (revision d13ab20cb7394c5ccee56b4115f771bcdc64b76a)
1cb512458SBarry Smith #ifndef lint
2*d13ab20cSBarry Smith static char vcid[] = "$Id: mpiaij.c,v 1.16 1995/03/25 01:10:01 curfman Exp bsmith $";
3cb512458SBarry Smith #endif
48a729477SBarry Smith 
51eb62cbbSBarry Smith #include "mpiaij.h"
68a729477SBarry Smith #include "vec/vecimpl.h"
7d6dfbf8fSBarry Smith #include "inline/spops.h"
88a729477SBarry Smith 
91eb62cbbSBarry Smith #define CHUNCKSIZE   100
101eb62cbbSBarry Smith /*
111eb62cbbSBarry Smith    This is a simple minded stash. Do a linear search to determine if
121eb62cbbSBarry Smith  in stash, if not add to end.
131eb62cbbSBarry Smith */
141eb62cbbSBarry Smith static int StashValues(Stash *stash,int row,int n, int *idxn,
151eb62cbbSBarry Smith                        Scalar *values,InsertMode addv)
168a729477SBarry Smith {
171eb62cbbSBarry Smith   int    i,j,N = stash->n,found,*n_idx, *n_idy;
181eb62cbbSBarry Smith   Scalar val,*n_array;
198a729477SBarry Smith 
201eb62cbbSBarry Smith   for ( i=0; i<n; i++ ) {
211eb62cbbSBarry Smith     found = 0;
221eb62cbbSBarry Smith     val = *values++;
238a729477SBarry Smith     for ( j=0; j<N; j++ ) {
241eb62cbbSBarry Smith       if ( stash->idx[j] == row && stash->idy[j] == idxn[i]) {
251eb62cbbSBarry Smith         /* found a match */
261eb62cbbSBarry Smith         if (addv == AddValues) stash->array[j] += val;
271eb62cbbSBarry Smith         else stash->array[j] = val;
281eb62cbbSBarry Smith         found = 1;
298a729477SBarry Smith         break;
308a729477SBarry Smith       }
318a729477SBarry Smith     }
321eb62cbbSBarry Smith     if (!found) { /* not found so add to end */
331eb62cbbSBarry Smith       if ( stash->n == stash->nmax ) {
341eb62cbbSBarry Smith         /* allocate a larger stash */
351eb62cbbSBarry Smith         n_array = (Scalar *) MALLOC( (stash->nmax + CHUNCKSIZE)*(
361eb62cbbSBarry Smith                                      2*sizeof(int) + sizeof(Scalar)));
371eb62cbbSBarry Smith         CHKPTR(n_array);
381eb62cbbSBarry Smith         n_idx = (int *) (n_array + stash->nmax + CHUNCKSIZE);
391eb62cbbSBarry Smith         n_idy = (int *) (n_idx + stash->nmax + CHUNCKSIZE);
401eb62cbbSBarry Smith         MEMCPY(n_array,stash->array,stash->nmax*sizeof(Scalar));
411eb62cbbSBarry Smith         MEMCPY(n_idx,stash->idx,stash->nmax*sizeof(int));
421eb62cbbSBarry Smith         MEMCPY(n_idy,stash->idy,stash->nmax*sizeof(int));
431eb62cbbSBarry Smith         if (stash->array) FREE(stash->array);
441eb62cbbSBarry Smith         stash->array = n_array; stash->idx = n_idx; stash->idy = n_idy;
451eb62cbbSBarry Smith         stash->nmax += CHUNCKSIZE;
461eb62cbbSBarry Smith       }
471eb62cbbSBarry Smith       stash->array[stash->n]   = val;
481eb62cbbSBarry Smith       stash->idx[stash->n]     = row;
491eb62cbbSBarry Smith       stash->idy[stash->n++]   = idxn[i];
501eb62cbbSBarry Smith     }
518a729477SBarry Smith   }
528a729477SBarry Smith   return 0;
538a729477SBarry Smith }
548a729477SBarry Smith 
559e25ed09SBarry Smith /* local utility routine that creates a mapping from the global column
569e25ed09SBarry Smith number to the local number in the off-diagonal part of the local
579e25ed09SBarry Smith storage of the matrix.  This is done in a non scable way since the
589e25ed09SBarry Smith length of colmap equals the global matrix length.
599e25ed09SBarry Smith */
609e25ed09SBarry Smith static int CreateColmap(Mat mat)
619e25ed09SBarry Smith {
6244a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
6344a69424SLois Curfman McInnes   Mat_AIJ    *B = (Mat_AIJ*) aij->B->data;
649e25ed09SBarry Smith   int        n = B->n,i;
659e25ed09SBarry Smith   aij->colmap = (int *) MALLOC( aij->N*sizeof(int) ); CHKPTR(aij->colmap);
6639e00950SLois Curfman McInnes   aij->invcolmap = (int *) MALLOC( aij->N*sizeof(int) ); CHKPTR(aij->invcolmap);
679e25ed09SBarry Smith   MEMSET(aij->colmap,0,aij->N*sizeof(int));
6839e00950SLois Curfman McInnes   MEMSET(aij->invcolmap,0,aij->N*sizeof(int));
699e25ed09SBarry Smith   for ( i=0; i<n; i++ ) {
709e25ed09SBarry Smith     aij->colmap[aij->garray[i]] = i+1;
7139e00950SLois Curfman McInnes     aij->invcolmap[i+1] = aij->garray[i];
729e25ed09SBarry Smith   }
739e25ed09SBarry Smith   return 0;
749e25ed09SBarry Smith }
759e25ed09SBarry Smith 
7644a69424SLois Curfman McInnes static int MatInsertValues_MPIAIJ(Mat mat,int m,int *idxm,int n,
771eb62cbbSBarry Smith                             int *idxn,Scalar *v,InsertMode addv)
788a729477SBarry Smith {
7944a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
801eb62cbbSBarry Smith   int        ierr,i,j, rstart = aij->rstart, rend = aij->rend;
811eb62cbbSBarry Smith   int        cstart = aij->cstart, cend = aij->cend,row,col;
828a729477SBarry Smith 
831eb62cbbSBarry Smith   if (aij->insertmode != NotSetValues && aij->insertmode != addv) {
841eb62cbbSBarry Smith     SETERR(1,"You cannot mix inserts and adds");
858a729477SBarry Smith   }
861eb62cbbSBarry Smith   aij->insertmode = addv;
878a729477SBarry Smith   for ( i=0; i<m; i++ ) {
88da3a660dSBarry Smith     if (idxm[i] < 0) SETERR(1,"Negative row index");
89da3a660dSBarry Smith     if (idxm[i] >= aij->M) SETERR(1,"Row index too large");
901eb62cbbSBarry Smith     if (idxm[i] >= rstart && idxm[i] < rend) {
911eb62cbbSBarry Smith       row = idxm[i] - rstart;
921eb62cbbSBarry Smith       for ( j=0; j<n; j++ ) {
93da3a660dSBarry Smith         if (idxn[j] < 0) SETERR(1,"Negative column index");
94da3a660dSBarry Smith         if (idxn[j] >= aij->N) SETERR(1,"Column index too large");
951eb62cbbSBarry Smith         if (idxn[j] >= cstart && idxn[j] < cend){
961eb62cbbSBarry Smith           col = idxn[j] - cstart;
971eb62cbbSBarry Smith           ierr = MatSetValues(aij->A,1,&row,1,&col,v+i*n+j,addv);CHKERR(ierr);
981eb62cbbSBarry Smith         }
991eb62cbbSBarry Smith         else {
100d6dfbf8fSBarry Smith           if (aij->assembled) {
1019e25ed09SBarry Smith             if (!aij->colmap) {ierr = CreateColmap(mat); CHKERR(ierr);}
1029e25ed09SBarry Smith             col = aij->colmap[idxn[j]] - 1;
1039e25ed09SBarry Smith             if (col < 0) {
1049e25ed09SBarry Smith               SETERR(1,"Cannot insert new off diagonal block nonzero in\
1059e25ed09SBarry Smith                      already\
106d6dfbf8fSBarry Smith                      assembled matrix. Contact petsc-maint@mcs.anl.gov\
107d6dfbf8fSBarry Smith                      if your need this feature");
108d6dfbf8fSBarry Smith             }
1099e25ed09SBarry Smith           }
1109e25ed09SBarry Smith           else col = idxn[j];
1111eb62cbbSBarry Smith           ierr = MatSetValues(aij->B,1,&row,1,&col,v+i*n+j,addv);CHKERR(ierr);
1121eb62cbbSBarry Smith         }
1131eb62cbbSBarry Smith       }
1141eb62cbbSBarry Smith     }
1151eb62cbbSBarry Smith     else {
1161eb62cbbSBarry Smith       ierr = StashValues(&aij->stash,idxm[i],n,idxn,v+i*n,addv);CHKERR(ierr);
1171eb62cbbSBarry Smith     }
1188a729477SBarry Smith   }
1198a729477SBarry Smith   return 0;
1208a729477SBarry Smith }
1218a729477SBarry Smith 
1228a729477SBarry Smith /*
1231eb62cbbSBarry Smith     the assembly code is alot like the code for vectors, we should
1241eb62cbbSBarry Smith     sometime derive a single assembly code that can be used for
1251eb62cbbSBarry Smith     either case.
1268a729477SBarry Smith */
1278a729477SBarry Smith 
12844a69424SLois Curfman McInnes static int MatBeginAssemble_MPIAIJ(Mat mat)
1298a729477SBarry Smith {
13044a69424SLois Curfman McInnes   Mat_MPIAIJ  *aij = (Mat_MPIAIJ *) mat->data;
131d6dfbf8fSBarry Smith   MPI_Comm    comm = mat->comm;
1326abc6512SBarry Smith   int         numtids = aij->numtids, *owners = aij->rowners;
1331eb62cbbSBarry Smith   int         mytid = aij->mytid;
1341eb62cbbSBarry Smith   MPI_Request *send_waits,*recv_waits;
1356abc6512SBarry Smith   int         *nprocs,i,j,idx,*procs,nsends,nreceives,nmax,*work;
1361eb62cbbSBarry Smith   int         tag = 50, *owner,*starts,count;
1371eb62cbbSBarry Smith   InsertMode  addv;
1381eb62cbbSBarry Smith   Scalar      *rvalues,*svalues;
1391eb62cbbSBarry Smith 
1401eb62cbbSBarry Smith   /* make sure all processors are either in INSERTMODE or ADDMODE */
14128988994SBarry Smith   MPI_Allreduce((void *) &aij->insertmode,(void *) &addv,1,MPI_INT,
1421eb62cbbSBarry Smith                 MPI_BOR,comm);
1431eb62cbbSBarry Smith   if (addv == (AddValues|InsertValues)) {
1441eb62cbbSBarry Smith     SETERR(1,"Some processors have inserted while others have added");
1451eb62cbbSBarry Smith   }
1461eb62cbbSBarry Smith   aij->insertmode = addv; /* in case this processor had no cache */
1471eb62cbbSBarry Smith 
1481eb62cbbSBarry Smith   /*  first count number of contributors to each processor */
1491eb62cbbSBarry Smith   nprocs = (int *) MALLOC( 2*numtids*sizeof(int) ); CHKPTR(nprocs);
1501eb62cbbSBarry Smith   MEMSET(nprocs,0,2*numtids*sizeof(int)); procs = nprocs + numtids;
1511eb62cbbSBarry Smith   owner = (int *) MALLOC( (aij->stash.n+1)*sizeof(int) ); CHKPTR(owner);
1521eb62cbbSBarry Smith   for ( i=0; i<aij->stash.n; i++ ) {
1531eb62cbbSBarry Smith     idx = aij->stash.idx[i];
1541eb62cbbSBarry Smith     for ( j=0; j<numtids; j++ ) {
1551eb62cbbSBarry Smith       if (idx >= owners[j] && idx < owners[j+1]) {
1561eb62cbbSBarry Smith         nprocs[j]++; procs[j] = 1; owner[i] = j; break;
1578a729477SBarry Smith       }
1588a729477SBarry Smith     }
1598a729477SBarry Smith   }
1601eb62cbbSBarry Smith   nsends = 0;  for ( i=0; i<numtids; i++ ) { nsends += procs[i];}
1611eb62cbbSBarry Smith 
1621eb62cbbSBarry Smith   /* inform other processors of number of messages and max length*/
1631eb62cbbSBarry Smith   work = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(work);
1641eb62cbbSBarry Smith   MPI_Allreduce((void *) procs,(void *) work,numtids,MPI_INT,MPI_SUM,comm);
1651eb62cbbSBarry Smith   nreceives = work[mytid];
1661eb62cbbSBarry Smith   MPI_Allreduce((void *) nprocs,(void *) work,numtids,MPI_INT,MPI_MAX,comm);
1671eb62cbbSBarry Smith   nmax = work[mytid];
1681eb62cbbSBarry Smith   FREE(work);
1691eb62cbbSBarry Smith 
1701eb62cbbSBarry Smith   /* post receives:
1711eb62cbbSBarry Smith        1) each message will consist of ordered pairs
1721eb62cbbSBarry Smith      (global index,value) we store the global index as a double
173d6dfbf8fSBarry Smith      to simplify the message passing.
1741eb62cbbSBarry Smith        2) since we don't know how long each individual message is we
1751eb62cbbSBarry Smith      allocate the largest needed buffer for each receive. Potentially
1761eb62cbbSBarry Smith      this is a lot of wasted space.
1771eb62cbbSBarry Smith 
1781eb62cbbSBarry Smith 
1791eb62cbbSBarry Smith        This could be done better.
1801eb62cbbSBarry Smith   */
18128988994SBarry Smith   rvalues = (Scalar *) MALLOC(3*(nreceives+1)*(nmax+1)*sizeof(Scalar));
1821eb62cbbSBarry Smith   CHKPTR(rvalues);
1831eb62cbbSBarry Smith   recv_waits = (MPI_Request *) MALLOC((nreceives+1)*sizeof(MPI_Request));
1841eb62cbbSBarry Smith   CHKPTR(recv_waits);
1851eb62cbbSBarry Smith   for ( i=0; i<nreceives; i++ ) {
1861eb62cbbSBarry Smith     MPI_Irecv((void *)(rvalues+3*nmax*i),3*nmax,MPI_SCALAR,MPI_ANY_SOURCE,tag,
1871eb62cbbSBarry Smith               comm,recv_waits+i);
1881eb62cbbSBarry Smith   }
1891eb62cbbSBarry Smith 
1901eb62cbbSBarry Smith   /* do sends:
1911eb62cbbSBarry Smith       1) starts[i] gives the starting index in svalues for stuff going to
1921eb62cbbSBarry Smith          the ith processor
1931eb62cbbSBarry Smith   */
1941eb62cbbSBarry Smith   svalues = (Scalar *) MALLOC( 3*(aij->stash.n+1)*sizeof(Scalar) );
1951eb62cbbSBarry Smith   CHKPTR(svalues);
1961eb62cbbSBarry Smith   send_waits = (MPI_Request *) MALLOC( (nsends+1)*sizeof(MPI_Request));
1971eb62cbbSBarry Smith   CHKPTR(send_waits);
1981eb62cbbSBarry Smith   starts = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(starts);
1991eb62cbbSBarry Smith   starts[0] = 0;
2001eb62cbbSBarry Smith   for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
2011eb62cbbSBarry Smith   for ( i=0; i<aij->stash.n; i++ ) {
2021eb62cbbSBarry Smith     svalues[3*starts[owner[i]]]       = (Scalar)  aij->stash.idx[i];
2031eb62cbbSBarry Smith     svalues[3*starts[owner[i]]+1]     = (Scalar)  aij->stash.idy[i];
2041eb62cbbSBarry Smith     svalues[3*(starts[owner[i]]++)+2] =  aij->stash.array[i];
2051eb62cbbSBarry Smith   }
2061eb62cbbSBarry Smith   FREE(owner);
2071eb62cbbSBarry Smith   starts[0] = 0;
2081eb62cbbSBarry Smith   for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
2091eb62cbbSBarry Smith   count = 0;
2101eb62cbbSBarry Smith   for ( i=0; i<numtids; i++ ) {
2111eb62cbbSBarry Smith     if (procs[i]) {
2121eb62cbbSBarry Smith       MPI_Isend((void*)(svalues+3*starts[i]),3*nprocs[i],MPI_SCALAR,i,tag,
2131eb62cbbSBarry Smith                 comm,send_waits+count++);
2141eb62cbbSBarry Smith     }
2151eb62cbbSBarry Smith   }
2161eb62cbbSBarry Smith   FREE(starts); FREE(nprocs);
2171eb62cbbSBarry Smith 
2181eb62cbbSBarry Smith   /* Free cache space */
2191eb62cbbSBarry Smith   aij->stash.nmax = aij->stash.n = 0;
2201eb62cbbSBarry Smith   if (aij->stash.array){ FREE(aij->stash.array); aij->stash.array = 0;}
2211eb62cbbSBarry Smith 
2221eb62cbbSBarry Smith   aij->svalues    = svalues;       aij->rvalues = rvalues;
2231eb62cbbSBarry Smith   aij->nsends     = nsends;         aij->nrecvs = nreceives;
2241eb62cbbSBarry Smith   aij->send_waits = send_waits; aij->recv_waits = recv_waits;
2251eb62cbbSBarry Smith   aij->rmax       = nmax;
2261eb62cbbSBarry Smith 
2271eb62cbbSBarry Smith   return 0;
2281eb62cbbSBarry Smith }
22944a69424SLois Curfman McInnes extern int MatSetUpMultiply_MPIAIJ(Mat);
2301eb62cbbSBarry Smith 
23144a69424SLois Curfman McInnes static int MatEndAssemble_MPIAIJ(Mat mat)
2321eb62cbbSBarry Smith {
2331eb62cbbSBarry Smith   int        ierr;
23444a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
2351eb62cbbSBarry Smith 
2361eb62cbbSBarry Smith   MPI_Status  *send_status,recv_status;
2376abc6512SBarry Smith   int         imdex,nrecvs = aij->nrecvs, count = nrecvs, i, n;
2381eb62cbbSBarry Smith   int         row,col;
2391eb62cbbSBarry Smith   Scalar      *values,val;
2401eb62cbbSBarry Smith   InsertMode  addv = aij->insertmode;
2411eb62cbbSBarry Smith 
2421eb62cbbSBarry Smith   /*  wait on receives */
2431eb62cbbSBarry Smith   while (count) {
244d6dfbf8fSBarry Smith     MPI_Waitany(nrecvs,aij->recv_waits,&imdex,&recv_status);
2451eb62cbbSBarry Smith     /* unpack receives into our local space */
246d6dfbf8fSBarry Smith     values = aij->rvalues + 3*imdex*aij->rmax;
2471eb62cbbSBarry Smith     MPI_Get_count(&recv_status,MPI_SCALAR,&n);
2481eb62cbbSBarry Smith     n = n/3;
2491eb62cbbSBarry Smith     for ( i=0; i<n; i++ ) {
2501eb62cbbSBarry Smith       row = (int) PETSCREAL(values[3*i]) - aij->rstart;
2511eb62cbbSBarry Smith       col = (int) PETSCREAL(values[3*i+1]);
2521eb62cbbSBarry Smith       val = values[3*i+2];
2531eb62cbbSBarry Smith       if (col >= aij->cstart && col < aij->cend) {
2541eb62cbbSBarry Smith           col -= aij->cstart;
2551eb62cbbSBarry Smith         MatSetValues(aij->A,1,&row,1,&col,&val,addv);
2561eb62cbbSBarry Smith       }
2571eb62cbbSBarry Smith       else {
258d6dfbf8fSBarry Smith         if (aij->assembled) {
2599e25ed09SBarry Smith           if (!aij->colmap) {ierr = CreateColmap(mat); CHKERR(ierr);}
2609e25ed09SBarry Smith           col = aij->colmap[col] - 1;
2619e25ed09SBarry Smith           if (col < 0) {
2629e25ed09SBarry Smith             SETERR(1,"Cannot insert new off diagonal block nonzero in\
2639e25ed09SBarry Smith                      already\
264d6dfbf8fSBarry Smith                      assembled matrix. Contact petsc-maint@mcs.anl.gov\
265d6dfbf8fSBarry Smith                      if your need this feature");
266d6dfbf8fSBarry Smith           }
2679e25ed09SBarry Smith         }
2681eb62cbbSBarry Smith         MatSetValues(aij->B,1,&row,1,&col,&val,addv);
2691eb62cbbSBarry Smith       }
2701eb62cbbSBarry Smith     }
2711eb62cbbSBarry Smith     count--;
2721eb62cbbSBarry Smith   }
2731eb62cbbSBarry Smith   FREE(aij->recv_waits); FREE(aij->rvalues);
2741eb62cbbSBarry Smith 
2751eb62cbbSBarry Smith   /* wait on sends */
2761eb62cbbSBarry Smith   if (aij->nsends) {
2771eb62cbbSBarry Smith     send_status = (MPI_Status *) MALLOC( aij->nsends*sizeof(MPI_Status) );
2781eb62cbbSBarry Smith     CHKPTR(send_status);
2791eb62cbbSBarry Smith     MPI_Waitall(aij->nsends,aij->send_waits,send_status);
2801eb62cbbSBarry Smith     FREE(send_status);
2811eb62cbbSBarry Smith   }
2821eb62cbbSBarry Smith   FREE(aij->send_waits); FREE(aij->svalues);
2831eb62cbbSBarry Smith 
2841eb62cbbSBarry Smith   aij->insertmode = NotSetValues;
2851eb62cbbSBarry Smith   ierr = MatBeginAssembly(aij->A); CHKERR(ierr);
2861eb62cbbSBarry Smith   ierr = MatEndAssembly(aij->A); CHKERR(ierr);
2871eb62cbbSBarry Smith 
2889e25ed09SBarry Smith   if (!aij->assembled) {
289d3c9fed9SLois Curfman McInnes     ierr = MatSetUpMultiply_MPIAIJ(mat); CHKERR(ierr);
2909e25ed09SBarry Smith   }
2911eb62cbbSBarry Smith   ierr = MatBeginAssembly(aij->B); CHKERR(ierr);
2921eb62cbbSBarry Smith   ierr = MatEndAssembly(aij->B); CHKERR(ierr);
293d6dfbf8fSBarry Smith 
294d6dfbf8fSBarry Smith   aij->assembled = 1;
2958a729477SBarry Smith   return 0;
2968a729477SBarry Smith }
2978a729477SBarry Smith 
29844a69424SLois Curfman McInnes static int MatZero_MPIAIJ(Mat A)
2991eb62cbbSBarry Smith {
30044a69424SLois Curfman McInnes   Mat_MPIAIJ *l = (Mat_MPIAIJ *) A->data;
3011eb62cbbSBarry Smith 
3021eb62cbbSBarry Smith   MatZeroEntries(l->A); MatZeroEntries(l->B);
3031eb62cbbSBarry Smith   return 0;
3041eb62cbbSBarry Smith }
3051eb62cbbSBarry Smith 
3061eb62cbbSBarry Smith /* again this uses the same basic stratagy as in the assembly and
3071eb62cbbSBarry Smith    scatter create routines, we should try to do it systemamatically
3081eb62cbbSBarry Smith    if we can figure out the proper level of generality. */
3091eb62cbbSBarry Smith 
3101eb62cbbSBarry Smith /* the code does not do the diagonal entries correctly unless the
3111eb62cbbSBarry Smith    matrix is square and the column and row owerships are identical.
3121eb62cbbSBarry Smith    This is a BUG. The only way to fix it seems to be to access
3131eb62cbbSBarry Smith    aij->A and aij->B directly and not through the MatZeroRows()
3141eb62cbbSBarry Smith    routine.
3151eb62cbbSBarry Smith */
31644a69424SLois Curfman McInnes static int MatZeroRows_MPIAIJ(Mat A,IS is,Scalar *diag)
3171eb62cbbSBarry Smith {
31844a69424SLois Curfman McInnes   Mat_MPIAIJ     *l = (Mat_MPIAIJ *) A->data;
3191eb62cbbSBarry Smith   int            i,ierr,N, *rows,*owners = l->rowners,numtids = l->numtids;
3206abc6512SBarry Smith   int            *procs,*nprocs,j,found,idx,nsends,*work;
3211eb62cbbSBarry Smith   int            nmax,*svalues,*starts,*owner,nrecvs,mytid = l->mytid;
3226abc6512SBarry Smith   int            *rvalues,tag = 67,count,base,slen,n,*source;
323d6dfbf8fSBarry Smith   int            *lens,imdex,*lrows,*values;
324d6dfbf8fSBarry Smith   MPI_Comm       comm = A->comm;
3251eb62cbbSBarry Smith   MPI_Request    *send_waits,*recv_waits;
3261eb62cbbSBarry Smith   MPI_Status     recv_status,*send_status;
3271eb62cbbSBarry Smith   IS             istmp;
3281eb62cbbSBarry Smith 
32944a69424SLois Curfman McInnes   if (!l->assembled) SETERR(1,"MatZeroRows_MPIAIJ: must assemble matrix first");
3301eb62cbbSBarry Smith   ierr = ISGetLocalSize(is,&N); CHKERR(ierr);
3311eb62cbbSBarry Smith   ierr = ISGetIndices(is,&rows); CHKERR(ierr);
3321eb62cbbSBarry Smith 
3331eb62cbbSBarry Smith   /*  first count number of contributors to each processor */
3341eb62cbbSBarry Smith   nprocs = (int *) MALLOC( 2*numtids*sizeof(int) ); CHKPTR(nprocs);
3351eb62cbbSBarry Smith   MEMSET(nprocs,0,2*numtids*sizeof(int)); procs = nprocs + numtids;
3361eb62cbbSBarry Smith   owner = (int *) MALLOC((N+1)*sizeof(int)); CHKPTR(owner); /* see note*/
3371eb62cbbSBarry Smith   for ( i=0; i<N; i++ ) {
3381eb62cbbSBarry Smith     idx = rows[i];
3391eb62cbbSBarry Smith     found = 0;
3401eb62cbbSBarry Smith     for ( j=0; j<numtids; j++ ) {
3411eb62cbbSBarry Smith       if (idx >= owners[j] && idx < owners[j+1]) {
3421eb62cbbSBarry Smith         nprocs[j]++; procs[j] = 1; owner[i] = j; found = 1; break;
3431eb62cbbSBarry Smith       }
3441eb62cbbSBarry Smith     }
345d6dfbf8fSBarry Smith     if (!found) SETERR(1,"Imdex out of range");
3461eb62cbbSBarry Smith   }
3471eb62cbbSBarry Smith   nsends = 0;  for ( i=0; i<numtids; i++ ) { nsends += procs[i];}
3481eb62cbbSBarry Smith 
3491eb62cbbSBarry Smith   /* inform other processors of number of messages and max length*/
3501eb62cbbSBarry Smith   work = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(work);
3511eb62cbbSBarry Smith   MPI_Allreduce((void *) procs,(void *) work,numtids,MPI_INT,MPI_SUM,comm);
3521eb62cbbSBarry Smith   nrecvs = work[mytid];
3531eb62cbbSBarry Smith   MPI_Allreduce((void *) nprocs,(void *) work,numtids,MPI_INT,MPI_MAX,comm);
3541eb62cbbSBarry Smith   nmax = work[mytid];
3551eb62cbbSBarry Smith   FREE(work);
3561eb62cbbSBarry Smith 
3571eb62cbbSBarry Smith   /* post receives:   */
35828988994SBarry Smith   rvalues = (int *) MALLOC((nrecvs+1)*(nmax+1)*sizeof(int)); /*see note */
3591eb62cbbSBarry Smith   CHKPTR(rvalues);
3601eb62cbbSBarry Smith   recv_waits = (MPI_Request *) MALLOC((nrecvs+1)*sizeof(MPI_Request));
3611eb62cbbSBarry Smith   CHKPTR(recv_waits);
3621eb62cbbSBarry Smith   for ( i=0; i<nrecvs; i++ ) {
3631eb62cbbSBarry Smith     MPI_Irecv((void *)(rvalues+nmax*i),nmax,MPI_INT,MPI_ANY_SOURCE,tag,
3641eb62cbbSBarry Smith               comm,recv_waits+i);
3651eb62cbbSBarry Smith   }
3661eb62cbbSBarry Smith 
3671eb62cbbSBarry Smith   /* do sends:
3681eb62cbbSBarry Smith       1) starts[i] gives the starting index in svalues for stuff going to
3691eb62cbbSBarry Smith          the ith processor
3701eb62cbbSBarry Smith   */
3711eb62cbbSBarry Smith   svalues = (int *) MALLOC( (N+1)*sizeof(int) ); CHKPTR(svalues);
3721eb62cbbSBarry Smith   send_waits = (MPI_Request *) MALLOC( (nsends+1)*sizeof(MPI_Request));
3731eb62cbbSBarry Smith   CHKPTR(send_waits);
3741eb62cbbSBarry Smith   starts = (int *) MALLOC( (numtids+1)*sizeof(int) ); CHKPTR(starts);
3751eb62cbbSBarry Smith   starts[0] = 0;
3761eb62cbbSBarry Smith   for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
3771eb62cbbSBarry Smith   for ( i=0; i<N; i++ ) {
3781eb62cbbSBarry Smith     svalues[starts[owner[i]]++] = rows[i];
3791eb62cbbSBarry Smith   }
3801eb62cbbSBarry Smith   ISRestoreIndices(is,&rows);
3811eb62cbbSBarry Smith 
3821eb62cbbSBarry Smith   starts[0] = 0;
3831eb62cbbSBarry Smith   for ( i=1; i<numtids+1; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];}
3841eb62cbbSBarry Smith   count = 0;
3851eb62cbbSBarry Smith   for ( i=0; i<numtids; i++ ) {
3861eb62cbbSBarry Smith     if (procs[i]) {
3871eb62cbbSBarry Smith       MPI_Isend((void*)(svalues+starts[i]),nprocs[i],MPI_INT,i,tag,
3881eb62cbbSBarry Smith                 comm,send_waits+count++);
3891eb62cbbSBarry Smith     }
3901eb62cbbSBarry Smith   }
3911eb62cbbSBarry Smith   FREE(starts);
3921eb62cbbSBarry Smith 
3931eb62cbbSBarry Smith   base = owners[mytid];
3941eb62cbbSBarry Smith 
3951eb62cbbSBarry Smith   /*  wait on receives */
3961eb62cbbSBarry Smith   lens = (int *) MALLOC( 2*(nrecvs+1)*sizeof(int) ); CHKPTR(lens);
3971eb62cbbSBarry Smith   source = lens + nrecvs;
3981eb62cbbSBarry Smith   count = nrecvs; slen = 0;
3991eb62cbbSBarry Smith   while (count) {
400d6dfbf8fSBarry Smith     MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);
4011eb62cbbSBarry Smith     /* unpack receives into our local space */
4021eb62cbbSBarry Smith     MPI_Get_count(&recv_status,MPI_INT,&n);
403d6dfbf8fSBarry Smith     source[imdex]  = recv_status.MPI_SOURCE;
404d6dfbf8fSBarry Smith     lens[imdex]  = n;
4051eb62cbbSBarry Smith     slen += n;
4061eb62cbbSBarry Smith     count--;
4071eb62cbbSBarry Smith   }
4081eb62cbbSBarry Smith   FREE(recv_waits);
4091eb62cbbSBarry Smith 
4101eb62cbbSBarry Smith   /* move the data into the send scatter */
4111eb62cbbSBarry Smith   lrows = (int *) MALLOC( slen*sizeof(int) ); CHKPTR(lrows);
4121eb62cbbSBarry Smith   count = 0;
4131eb62cbbSBarry Smith   for ( i=0; i<nrecvs; i++ ) {
4141eb62cbbSBarry Smith     values = rvalues + i*nmax;
4151eb62cbbSBarry Smith     for ( j=0; j<lens[i]; j++ ) {
4161eb62cbbSBarry Smith       lrows[count++] = values[j] - base;
4171eb62cbbSBarry Smith     }
4181eb62cbbSBarry Smith   }
4191eb62cbbSBarry Smith   FREE(rvalues); FREE(lens);
4201eb62cbbSBarry Smith   FREE(owner); FREE(nprocs);
4211eb62cbbSBarry Smith 
4221eb62cbbSBarry Smith   /* actually zap the local rows */
4231eb62cbbSBarry Smith   ierr = ISCreateSequential(slen,lrows,&istmp); CHKERR(ierr);  FREE(lrows);
4241eb62cbbSBarry Smith   ierr = MatZeroRows(l->A,istmp,diag); CHKERR(ierr);
4251eb62cbbSBarry Smith   ierr = MatZeroRows(l->B,istmp,0); CHKERR(ierr);
4261eb62cbbSBarry Smith   ierr = ISDestroy(istmp); CHKERR(ierr);
4271eb62cbbSBarry Smith 
4281eb62cbbSBarry Smith   /* wait on sends */
4291eb62cbbSBarry Smith   if (nsends) {
4301eb62cbbSBarry Smith     send_status = (MPI_Status *) MALLOC( nsends*sizeof(MPI_Status) );
4311eb62cbbSBarry Smith     CHKPTR(send_status);
4321eb62cbbSBarry Smith     MPI_Waitall(nsends,send_waits,send_status);
4331eb62cbbSBarry Smith     FREE(send_status);
4341eb62cbbSBarry Smith   }
4351eb62cbbSBarry Smith   FREE(send_waits); FREE(svalues);
4361eb62cbbSBarry Smith 
4371eb62cbbSBarry Smith 
4381eb62cbbSBarry Smith   return 0;
4391eb62cbbSBarry Smith }
4401eb62cbbSBarry Smith 
44144a69424SLois Curfman McInnes static int MatMult_MPIAIJ(Mat aijin,Vec xx,Vec yy)
4421eb62cbbSBarry Smith {
44344a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
4441eb62cbbSBarry Smith   int        ierr;
44544a69424SLois Curfman McInnes   if (!aij->assembled) SETERR(1,"MatMult_MPIAIJ: must assemble matrix first");
446d6dfbf8fSBarry Smith   ierr = VecScatterBegin(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx);
4471eb62cbbSBarry Smith   CHKERR(ierr);
4481eb62cbbSBarry Smith   ierr = MatMult(aij->A,xx,yy); CHKERR(ierr);
449d6dfbf8fSBarry Smith   ierr = VecScatterEnd(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx);
450d6dfbf8fSBarry Smith   CHKERR(ierr);
4511eb62cbbSBarry Smith   ierr = MatMultAdd(aij->B,aij->lvec,yy,yy); CHKERR(ierr);
4521eb62cbbSBarry Smith   return 0;
4531eb62cbbSBarry Smith }
4541eb62cbbSBarry Smith 
45544a69424SLois Curfman McInnes static int MatMultAdd_MPIAIJ(Mat aijin,Vec xx,Vec yy,Vec zz)
456da3a660dSBarry Smith {
45744a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
458da3a660dSBarry Smith   int        ierr;
45944a69424SLois Curfman McInnes   if (!aij->assembled) SETERR(1,"MatMult_MPIAIJ: must assemble matrix first");
460da3a660dSBarry Smith   ierr = VecScatterBegin(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx);
461da3a660dSBarry Smith   CHKERR(ierr);
462da3a660dSBarry Smith   ierr = MatMultAdd(aij->A,xx,yy,zz); CHKERR(ierr);
463da3a660dSBarry Smith   ierr = VecScatterEnd(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx);
464da3a660dSBarry Smith   CHKERR(ierr);
465da3a660dSBarry Smith   ierr = MatMultAdd(aij->B,aij->lvec,zz,zz); CHKERR(ierr);
466da3a660dSBarry Smith   return 0;
467da3a660dSBarry Smith }
468da3a660dSBarry Smith 
46944a69424SLois Curfman McInnes static int MatMultTrans_MPIAIJ(Mat aijin,Vec xx,Vec yy)
470da3a660dSBarry Smith {
47144a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
472da3a660dSBarry Smith   int        ierr;
473da3a660dSBarry Smith 
47444a69424SLois Curfman McInnes   if (!aij->assembled)
47544a69424SLois Curfman McInnes     SETERR(1,"MatMulTrans_MPIAIJ: must assemble matrix first");
476da3a660dSBarry Smith   /* do nondiagonal part */
477da3a660dSBarry Smith   ierr = MatMultTrans(aij->B,xx,aij->lvec); CHKERR(ierr);
478da3a660dSBarry Smith   /* send it on its way */
479da3a660dSBarry Smith   ierr = VecScatterBegin(aij->lvec,0,yy,0,AddValues,
480da3a660dSBarry Smith                          ScatterAll|ScatterReverse,aij->Mvctx); CHKERR(ierr);
481da3a660dSBarry Smith   /* do local part */
482da3a660dSBarry Smith   ierr = MatMultTrans(aij->A,xx,yy); CHKERR(ierr);
483da3a660dSBarry Smith   /* receive remote parts: note this assumes the values are not actually */
484da3a660dSBarry Smith   /* inserted in yy until the next line, which is true for my implementation*/
485da3a660dSBarry Smith   /* but is not perhaps always true. */
486da3a660dSBarry Smith   ierr = VecScatterEnd(aij->lvec,0,yy,0,AddValues,ScatterAll|ScatterReverse,
487da3a660dSBarry Smith                          aij->Mvctx); CHKERR(ierr);
488da3a660dSBarry Smith   return 0;
489da3a660dSBarry Smith }
490da3a660dSBarry Smith 
49144a69424SLois Curfman McInnes static int MatMultTransAdd_MPIAIJ(Mat aijin,Vec xx,Vec yy,Vec zz)
492da3a660dSBarry Smith {
49344a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
494da3a660dSBarry Smith   int        ierr;
495da3a660dSBarry Smith 
49644a69424SLois Curfman McInnes   if (!aij->assembled)
49744a69424SLois Curfman McInnes     SETERR(1,"MatMulTransAdd_MPIAIJ: must assemble matrix first");
498da3a660dSBarry Smith   /* do nondiagonal part */
499da3a660dSBarry Smith   ierr = MatMultTrans(aij->B,xx,aij->lvec); CHKERR(ierr);
500da3a660dSBarry Smith   /* send it on its way */
501da3a660dSBarry Smith   ierr = VecScatterBegin(aij->lvec,0,zz,0,AddValues,
502da3a660dSBarry Smith                          ScatterAll|ScatterReverse,aij->Mvctx); CHKERR(ierr);
503da3a660dSBarry Smith   /* do local part */
504da3a660dSBarry Smith   ierr = MatMultTransAdd(aij->A,xx,yy,zz); CHKERR(ierr);
505da3a660dSBarry Smith   /* receive remote parts: note this assumes the values are not actually */
506da3a660dSBarry Smith   /* inserted in yy until the next line, which is true for my implementation*/
507da3a660dSBarry Smith   /* but is not perhaps always true. */
508da3a660dSBarry Smith   ierr = VecScatterEnd(aij->lvec,0,zz,0,AddValues,ScatterAll|ScatterReverse,
509da3a660dSBarry Smith                          aij->Mvctx); CHKERR(ierr);
510da3a660dSBarry Smith   return 0;
511da3a660dSBarry Smith }
512da3a660dSBarry Smith 
5131eb62cbbSBarry Smith /*
5141eb62cbbSBarry Smith   This only works correctly for square matrices where the subblock A->A is the
5151eb62cbbSBarry Smith    diagonal block
5161eb62cbbSBarry Smith */
51744a69424SLois Curfman McInnes static int MatGetDiag_MPIAIJ(Mat Ain,Vec v)
5181eb62cbbSBarry Smith {
51944a69424SLois Curfman McInnes   Mat_MPIAIJ *A = (Mat_MPIAIJ *) Ain->data;
52044a69424SLois Curfman McInnes   if (!A->assembled) SETERR(1,"MatGetDiag_MPIAIJ: must assemble matrix first");
5211eb62cbbSBarry Smith   return MatGetDiagonal(A->A,v);
5221eb62cbbSBarry Smith }
5231eb62cbbSBarry Smith 
52444a69424SLois Curfman McInnes static int MatDestroy_MPIAIJ(PetscObject obj)
5251eb62cbbSBarry Smith {
5261eb62cbbSBarry Smith   Mat        mat = (Mat) obj;
52744a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
5281eb62cbbSBarry Smith   int        ierr;
529a5a9c739SBarry Smith #if defined(PETSC_LOG)
530a5a9c739SBarry Smith   PLogObjectState(obj,"Rows %d Cols %d",aij->M,aij->N);
531a5a9c739SBarry Smith #endif
5321eb62cbbSBarry Smith   FREE(aij->rowners);
5331eb62cbbSBarry Smith   ierr = MatDestroy(aij->A); CHKERR(ierr);
5341eb62cbbSBarry Smith   ierr = MatDestroy(aij->B); CHKERR(ierr);
5359e25ed09SBarry Smith   if (aij->colmap) FREE(aij->colmap);
5369e25ed09SBarry Smith   if (aij->garray) FREE(aij->garray);
5371eb62cbbSBarry Smith   if (aij->lvec) VecDestroy(aij->lvec);
5381eb62cbbSBarry Smith   if (aij->Mvctx) VecScatterCtxDestroy(aij->Mvctx);
539a5a9c739SBarry Smith   FREE(aij);
540a5a9c739SBarry Smith   PLogObjectDestroy(mat);
541a5a9c739SBarry Smith   PETSCHEADERDESTROY(mat);
5421eb62cbbSBarry Smith   return 0;
5431eb62cbbSBarry Smith }
5441eb62cbbSBarry Smith 
54544a69424SLois Curfman McInnes static int MatView_MPIAIJ(PetscObject obj,Viewer viewer)
5461eb62cbbSBarry Smith {
5471eb62cbbSBarry Smith   Mat        mat = (Mat) obj;
54844a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) mat->data;
5491eb62cbbSBarry Smith   int        ierr;
550*d13ab20cSBarry Smith   PetscObject vobj = (PetscObject) viewer;
5511eb62cbbSBarry Smith 
55244a69424SLois Curfman McInnes   if (!aij->assembled) SETERR(1,"MatView_MPIAIJ: must assemble matrix first");
553*d13ab20cSBarry Smith   if (vobj->cookie == VIEWER_COOKIE) {
554*d13ab20cSBarry Smith     FILE *fd = ViewerFileGetPointer(viewer);
555*d13ab20cSBarry Smith     if (vobj->type == FILE_VIEWER) {
556d6dfbf8fSBarry Smith       MPE_Seq_begin(mat->comm,1);
557*d13ab20cSBarry Smith       fprintf(fd,"[%d] rows %d starts %d ends %d cols %d starts %d ends %d\n",
5581eb62cbbSBarry Smith              aij->mytid,aij->m,aij->rstart,aij->rend,aij->n,aij->cstart,
5591eb62cbbSBarry Smith              aij->cend);
560da69df5fSBarry Smith       ierr = MatView(aij->A,viewer); CHKERR(ierr);
561da69df5fSBarry Smith       ierr = MatView(aij->B,viewer); CHKERR(ierr);
562*d13ab20cSBarry Smith       fflush(fd);
563d6dfbf8fSBarry Smith       MPE_Seq_end(mat->comm,1);
564*d13ab20cSBarry Smith     }
565*d13ab20cSBarry Smith   }
5661eb62cbbSBarry Smith   return 0;
5671eb62cbbSBarry Smith }
5681eb62cbbSBarry Smith 
569d3c9fed9SLois Curfman McInnes extern int MatMarkDiag_AIJ(Mat_AIJ  *);
5701eb62cbbSBarry Smith /*
5711eb62cbbSBarry Smith     This has to provide several versions.
5721eb62cbbSBarry Smith 
5731eb62cbbSBarry Smith      1) per sequential
5741eb62cbbSBarry Smith      2) a) use only local smoothing updating outer values only once.
5751eb62cbbSBarry Smith         b) local smoothing updating outer values each inner iteration
576d6dfbf8fSBarry Smith      3) color updating out values betwen colors.
5771eb62cbbSBarry Smith */
57844a69424SLois Curfman McInnes static int MatRelax_MPIAIJ(Mat matin,Vec bb,double omega,int flag,double shift,
5798a729477SBarry Smith                         int its,Vec xx)
5808a729477SBarry Smith {
58144a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
582d6dfbf8fSBarry Smith   Mat        AA = mat->A, BB = mat->B;
58344a69424SLois Curfman McInnes   Mat_AIJ    *A = (Mat_AIJ *) AA->data, *B = (Mat_AIJ *)BB->data;
5846abc6512SBarry Smith   Scalar     zero = 0.0,*b,*x,*xs,*ls,d,*v,sum,scale,*t,*ts;
5856abc6512SBarry Smith   int        ierr,*idx, *diag;
5866abc6512SBarry Smith   int        n = mat->n, m = mat->m, i;
587da3a660dSBarry Smith   Vec        tt;
5888a729477SBarry Smith 
58944a69424SLois Curfman McInnes   if (!mat->assembled) SETERR(1,"MatRelax_MPIAIJ: must assemble matrix first");
5901eb62cbbSBarry Smith 
591d6dfbf8fSBarry Smith   VecGetArray(xx,&x); VecGetArray(bb,&b); VecGetArray(mat->lvec,&ls);
592d6dfbf8fSBarry Smith   xs = x -1; /* shift by one for index start of 1 */
593da3a660dSBarry Smith   ls--;
594d3c9fed9SLois Curfman McInnes   if (!A->diag) {if ((ierr = MatMarkDiag_AIJ(A))) return ierr;}
595d6dfbf8fSBarry Smith   diag = A->diag;
596acb40c82SBarry Smith   if (flag == SOR_APPLY_UPPER || flag == SOR_APPLY_LOWER) {
597acb40c82SBarry Smith     SETERR(1,"That option not yet support for parallel AIJ matrices");
598acb40c82SBarry Smith   }
599da3a660dSBarry Smith   if (flag & SOR_EISENSTAT) {
600da3a660dSBarry Smith     /* Let  A = L + U + D; where L is lower trianglar,
601da3a660dSBarry Smith     U is upper triangular, E is diagonal; This routine applies
602da3a660dSBarry Smith 
603da3a660dSBarry Smith             (L + E)^{-1} A (U + E)^{-1}
604da3a660dSBarry Smith 
605da3a660dSBarry Smith     to a vector efficiently using Eisenstat's trick. This is for
606da3a660dSBarry Smith     the case of SSOR preconditioner, so E is D/omega where omega
607da3a660dSBarry Smith     is the relaxation factor.
608da3a660dSBarry Smith     */
609da3a660dSBarry Smith     ierr = VecCreate(xx,&tt); CHKERR(ierr);
610da3a660dSBarry Smith     VecGetArray(tt,&t);
611da3a660dSBarry Smith     scale = (2.0/omega) - 1.0;
612da3a660dSBarry Smith     /*  x = (E + U)^{-1} b */
613da3a660dSBarry Smith     VecSet(&zero,mat->lvec);
614da3a660dSBarry Smith     ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp,
615da3a660dSBarry Smith                               mat->Mvctx); CHKERR(ierr);
616da3a660dSBarry Smith     for ( i=m-1; i>-1; i-- ) {
617da3a660dSBarry Smith       n    = A->i[i+1] - diag[i] - 1;
618da3a660dSBarry Smith       idx  = A->j + diag[i];
619da3a660dSBarry Smith       v    = A->a + diag[i];
620da3a660dSBarry Smith       sum  = b[i];
621da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,xs,v,idx,n);
622da3a660dSBarry Smith       d    = shift + A->a[diag[i]-1];
623da3a660dSBarry Smith       n    = B->i[i+1] - B->i[i];
624da3a660dSBarry Smith       idx  = B->j + B->i[i] - 1;
625da3a660dSBarry Smith       v    = B->a + B->i[i] - 1;
626da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,ls,v,idx,n);
627da3a660dSBarry Smith       x[i] = omega*(sum/d);
628da3a660dSBarry Smith     }
629da3a660dSBarry Smith     ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp,
630da3a660dSBarry Smith                             mat->Mvctx); CHKERR(ierr);
631da3a660dSBarry Smith 
632da3a660dSBarry Smith     /*  t = b - (2*E - D)x */
633da3a660dSBarry Smith     v = A->a;
634da3a660dSBarry Smith     for ( i=0; i<m; i++ ) { t[i] = b[i] - scale*(v[*diag++ - 1])*x[i]; }
635da3a660dSBarry Smith 
636da3a660dSBarry Smith     /*  t = (E + L)^{-1}t */
637da3a660dSBarry Smith     ts = t - 1; /* shifted by one for index start of a or mat->j*/
638da3a660dSBarry Smith     diag = A->diag;
639da3a660dSBarry Smith     VecSet(&zero,mat->lvec);
640da3a660dSBarry Smith     ierr = VecPipelineBegin(tt,0,mat->lvec,0,InsertValues,PipelineDown,
641da3a660dSBarry Smith                                                  mat->Mvctx); CHKERR(ierr);
642da3a660dSBarry Smith     for ( i=0; i<m; i++ ) {
643da3a660dSBarry Smith       n    = diag[i] - A->i[i];
644da3a660dSBarry Smith       idx  = A->j + A->i[i] - 1;
645da3a660dSBarry Smith       v    = A->a + A->i[i] - 1;
646da3a660dSBarry Smith       sum  = t[i];
647da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,ts,v,idx,n);
648da3a660dSBarry Smith       d    = shift + A->a[diag[i]-1];
649da3a660dSBarry Smith       n    = B->i[i+1] - B->i[i];
650da3a660dSBarry Smith       idx  = B->j + B->i[i] - 1;
651da3a660dSBarry Smith       v    = B->a + B->i[i] - 1;
652da3a660dSBarry Smith       SPARSEDENSEMDOT(sum,ls,v,idx,n);
653da3a660dSBarry Smith       t[i] = omega*(sum/d);
654da3a660dSBarry Smith     }
655da3a660dSBarry Smith     ierr = VecPipelineEnd(tt,0,mat->lvec,0,InsertValues,PipelineDown,
656da3a660dSBarry Smith                                                     mat->Mvctx); CHKERR(ierr);
657da3a660dSBarry Smith     /*  x = x + t */
658da3a660dSBarry Smith     for ( i=0; i<m; i++ ) { x[i] += t[i]; }
659da3a660dSBarry Smith     VecDestroy(tt);
660da3a660dSBarry Smith     return 0;
661da3a660dSBarry Smith   }
662da3a660dSBarry Smith 
6631eb62cbbSBarry Smith 
664d6dfbf8fSBarry Smith   if ((flag & SOR_SYMMETRIC_SWEEP) == SOR_SYMMETRIC_SWEEP){
665da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
666da3a660dSBarry Smith       VecSet(&zero,mat->lvec); VecSet(&zero,xx);
667da3a660dSBarry Smith     }
668da3a660dSBarry Smith     else {
669d6dfbf8fSBarry Smith       ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx);
670d6dfbf8fSBarry Smith       CHKERR(ierr);
671d6dfbf8fSBarry Smith       ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx);
672d6dfbf8fSBarry Smith       CHKERR(ierr);
673da3a660dSBarry Smith     }
674d6dfbf8fSBarry Smith     while (its--) {
675d6dfbf8fSBarry Smith       /* go down through the rows */
676d6dfbf8fSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown,
677d6dfbf8fSBarry Smith                               mat->Mvctx); CHKERR(ierr);
678d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
679d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
680d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
681d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
682d6dfbf8fSBarry Smith         sum  = b[i];
683d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
684d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
685d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
686d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
687d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
688d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
689d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
690d6dfbf8fSBarry Smith       }
691d6dfbf8fSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown,
692d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
693d6dfbf8fSBarry Smith       /* come up through the rows */
694d6dfbf8fSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp,
695d6dfbf8fSBarry Smith                               mat->Mvctx); CHKERR(ierr);
696d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
697d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
698d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
699d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
700d6dfbf8fSBarry Smith         sum  = b[i];
701d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
702d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
703d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
704d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
705d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
706d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
707d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
708d6dfbf8fSBarry Smith       }
709d6dfbf8fSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp,
710d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
711d6dfbf8fSBarry Smith     }
712d6dfbf8fSBarry Smith   }
713d6dfbf8fSBarry Smith   else if (flag & SOR_FORWARD_SWEEP){
714da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
715da3a660dSBarry Smith       VecSet(&zero,mat->lvec);
716da3a660dSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown,
717da3a660dSBarry Smith                               mat->Mvctx); CHKERR(ierr);
718da3a660dSBarry Smith       for ( i=0; i<m; i++ ) {
719da3a660dSBarry Smith         n    = diag[i] - A->i[i];
720da3a660dSBarry Smith         idx  = A->j + A->i[i] - 1;
721da3a660dSBarry Smith         v    = A->a + A->i[i] - 1;
722da3a660dSBarry Smith         sum  = b[i];
723da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
724da3a660dSBarry Smith         d    = shift + A->a[diag[i]-1];
725da3a660dSBarry Smith         n    = B->i[i+1] - B->i[i];
726da3a660dSBarry Smith         idx  = B->j + B->i[i] - 1;
727da3a660dSBarry Smith         v    = B->a + B->i[i] - 1;
728da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
729da3a660dSBarry Smith         x[i] = omega*(sum/d);
730da3a660dSBarry Smith       }
731da3a660dSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown,
732da3a660dSBarry Smith                             mat->Mvctx); CHKERR(ierr);
733da3a660dSBarry Smith       its--;
734da3a660dSBarry Smith     }
735d6dfbf8fSBarry Smith     while (its--) {
736d6dfbf8fSBarry Smith       ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx);
737d6dfbf8fSBarry Smith       CHKERR(ierr);
738d6dfbf8fSBarry Smith       ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx);
739d6dfbf8fSBarry Smith       CHKERR(ierr);
740d6dfbf8fSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown,
741d6dfbf8fSBarry Smith                               mat->Mvctx); CHKERR(ierr);
742d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
743d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
744d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
745d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
746d6dfbf8fSBarry Smith         sum  = b[i];
747d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
748d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
749d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
750d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
751d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
752d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
753d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
754d6dfbf8fSBarry Smith       }
755d6dfbf8fSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown,
756d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
757d6dfbf8fSBarry Smith     }
758d6dfbf8fSBarry Smith   }
759d6dfbf8fSBarry Smith   else if (flag & SOR_BACKWARD_SWEEP){
760da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
761da3a660dSBarry Smith       VecSet(&zero,mat->lvec);
762da3a660dSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp,
763da3a660dSBarry Smith                               mat->Mvctx); CHKERR(ierr);
764da3a660dSBarry Smith       for ( i=m-1; i>-1; i-- ) {
765da3a660dSBarry Smith         n    = A->i[i+1] - diag[i] - 1;
766da3a660dSBarry Smith         idx  = A->j + diag[i];
767da3a660dSBarry Smith         v    = A->a + diag[i];
768da3a660dSBarry Smith         sum  = b[i];
769da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
770da3a660dSBarry Smith         d    = shift + A->a[diag[i]-1];
771da3a660dSBarry Smith         n    = B->i[i+1] - B->i[i];
772da3a660dSBarry Smith         idx  = B->j + B->i[i] - 1;
773da3a660dSBarry Smith         v    = B->a + B->i[i] - 1;
774da3a660dSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
775da3a660dSBarry Smith         x[i] = omega*(sum/d);
776da3a660dSBarry Smith       }
777da3a660dSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp,
778da3a660dSBarry Smith                             mat->Mvctx); CHKERR(ierr);
779da3a660dSBarry Smith       its--;
780da3a660dSBarry Smith     }
781d6dfbf8fSBarry Smith     while (its--) {
782d6dfbf8fSBarry Smith       ierr = VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterDown,
783d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
784d6dfbf8fSBarry Smith       ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterDown,
785d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
786d6dfbf8fSBarry Smith       ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp,
787d6dfbf8fSBarry Smith                               mat->Mvctx); CHKERR(ierr);
788d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
789d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
790d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
791d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
792d6dfbf8fSBarry Smith         sum  = b[i];
793d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
794d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
795d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
796d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
797d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
798d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
799d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
800d6dfbf8fSBarry Smith       }
801d6dfbf8fSBarry Smith       ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp,
802d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
803d6dfbf8fSBarry Smith     }
804d6dfbf8fSBarry Smith   }
805d6dfbf8fSBarry Smith   else if ((flag & SOR_LOCAL_SYMMETRIC_SWEEP) == SOR_LOCAL_SYMMETRIC_SWEEP){
806da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
807da3a660dSBarry Smith       return MatRelax(mat->A,bb,omega,flag,shift,its,xx);
808da3a660dSBarry Smith     }
809d6dfbf8fSBarry Smith     ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx);
810d6dfbf8fSBarry Smith     CHKERR(ierr);
811d6dfbf8fSBarry Smith     ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx);
812d6dfbf8fSBarry Smith     CHKERR(ierr);
813d6dfbf8fSBarry Smith     while (its--) {
814d6dfbf8fSBarry Smith       /* go down through the rows */
815d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
816d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
817d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
818d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
819d6dfbf8fSBarry Smith         sum  = b[i];
820d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
821d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
822d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
823d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
824d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
825d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
826d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
827d6dfbf8fSBarry Smith       }
828d6dfbf8fSBarry Smith       /* come up through the rows */
829d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
830d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
831d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
832d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
833d6dfbf8fSBarry Smith         sum  = b[i];
834d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
835d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
836d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
837d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
838d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
839d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
840d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
841d6dfbf8fSBarry Smith       }
842d6dfbf8fSBarry Smith     }
843d6dfbf8fSBarry Smith   }
844d6dfbf8fSBarry Smith   else if (flag & SOR_LOCAL_FORWARD_SWEEP){
845da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
846da3a660dSBarry Smith       return MatRelax(mat->A,bb,omega,flag,shift,its,xx);
847da3a660dSBarry Smith     }
848d6dfbf8fSBarry Smith     ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx);
849d6dfbf8fSBarry Smith     CHKERR(ierr);
850d6dfbf8fSBarry Smith     ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx);
851d6dfbf8fSBarry Smith     CHKERR(ierr);
852d6dfbf8fSBarry Smith     while (its--) {
853d6dfbf8fSBarry Smith       for ( i=0; i<m; i++ ) {
854d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
855d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
856d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
857d6dfbf8fSBarry Smith         sum  = b[i];
858d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
859d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
860d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
861d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
862d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
863d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
864d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
865d6dfbf8fSBarry Smith       }
866d6dfbf8fSBarry Smith     }
867d6dfbf8fSBarry Smith   }
868d6dfbf8fSBarry Smith   else if (flag & SOR_LOCAL_BACKWARD_SWEEP){
869da3a660dSBarry Smith     if (flag & SOR_ZERO_INITIAL_GUESS) {
870da3a660dSBarry Smith       return MatRelax(mat->A,bb,omega,flag,shift,its,xx);
871da3a660dSBarry Smith     }
872d6dfbf8fSBarry Smith     ierr = VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll,
873d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
874d6dfbf8fSBarry Smith     ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll,
875d6dfbf8fSBarry Smith                             mat->Mvctx); CHKERR(ierr);
876d6dfbf8fSBarry Smith     while (its--) {
877d6dfbf8fSBarry Smith       for ( i=m-1; i>-1; i-- ) {
878d6dfbf8fSBarry Smith         n    = A->i[i+1] - A->i[i];
879d6dfbf8fSBarry Smith         idx  = A->j + A->i[i] - 1;
880d6dfbf8fSBarry Smith         v    = A->a + A->i[i] - 1;
881d6dfbf8fSBarry Smith         sum  = b[i];
882d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,xs,v,idx,n);
883d6dfbf8fSBarry Smith         d    = shift + A->a[diag[i]-1];
884d6dfbf8fSBarry Smith         n    = B->i[i+1] - B->i[i];
885d6dfbf8fSBarry Smith         idx  = B->j + B->i[i] - 1;
886d6dfbf8fSBarry Smith         v    = B->a + B->i[i] - 1;
887d6dfbf8fSBarry Smith         SPARSEDENSEMDOT(sum,ls,v,idx,n);
888d6dfbf8fSBarry Smith         x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]);
889d6dfbf8fSBarry Smith       }
890d6dfbf8fSBarry Smith     }
891d6dfbf8fSBarry Smith   }
8928a729477SBarry Smith   return 0;
8938a729477SBarry Smith }
89444a69424SLois Curfman McInnes static int MatInsOpt_MPIAIJ(Mat aijin,int op)
895c74985f6SBarry Smith {
89644a69424SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) aijin->data;
897c74985f6SBarry Smith 
898c74985f6SBarry Smith   if      (op == NO_NEW_NONZERO_LOCATIONS)  {
899c74985f6SBarry Smith     MatSetOption(aij->A,op);
900c74985f6SBarry Smith     MatSetOption(aij->B,op);
901c74985f6SBarry Smith   }
902c74985f6SBarry Smith   else if (op == YES_NEW_NONZERO_LOCATIONS) {
903c74985f6SBarry Smith     MatSetOption(aij->A,op);
904c74985f6SBarry Smith     MatSetOption(aij->B,op);
905c74985f6SBarry Smith   }
906c74985f6SBarry Smith   else if (op == COLUMN_ORIENTED) SETERR(1,"Column oriented not supported");
907c74985f6SBarry Smith   return 0;
908c74985f6SBarry Smith }
909c74985f6SBarry Smith 
91044a69424SLois Curfman McInnes static int MatSize_MPIAIJ(Mat matin,int *m,int *n)
911c74985f6SBarry Smith {
91244a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
913c74985f6SBarry Smith   *m = mat->M; *n = mat->N;
914c74985f6SBarry Smith   return 0;
915c74985f6SBarry Smith }
916c74985f6SBarry Smith 
91744a69424SLois Curfman McInnes static int MatLocalSize_MPIAIJ(Mat matin,int *m,int *n)
918c74985f6SBarry Smith {
91944a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
920c74985f6SBarry Smith   *m = mat->m; *n = mat->n;
921c74985f6SBarry Smith   return 0;
922c74985f6SBarry Smith }
923c74985f6SBarry Smith 
92444a69424SLois Curfman McInnes static int MatRange_MPIAIJ(Mat matin,int *m,int *n)
925c74985f6SBarry Smith {
92644a69424SLois Curfman McInnes   Mat_MPIAIJ *mat = (Mat_MPIAIJ *) matin->data;
927c74985f6SBarry Smith   *m = mat->rstart; *n = mat->rend;
928c74985f6SBarry Smith   return 0;
929c74985f6SBarry Smith }
930c74985f6SBarry Smith 
93139e00950SLois Curfman McInnes static int MatGetRow_MPIAIJ(Mat matin,int row,int *nz,int **idx,Scalar **v)
93239e00950SLois Curfman McInnes {
93339e00950SLois Curfman McInnes   Mat_MPIAIJ *aij = (Mat_MPIAIJ *) matin->data;
93439e00950SLois Curfman McInnes   Mat        A = aij->A, B = aij->B;
93539e00950SLois Curfman McInnes   Mat_AIJ    *Ad = (Mat_AIJ *)(A->data), *Bd = (Mat_AIJ *)(B->data);
93639e00950SLois Curfman McInnes   Scalar     *vworkA, *vworkB;
93739e00950SLois Curfman McInnes   int        ierr, *cworkA, *cworkB;
93839e00950SLois Curfman McInnes   int        nztot, nzA, nzB, i, rstart = aij->rstart, rend = aij->rend;
93939e00950SLois Curfman McInnes   int        cstart = aij->cstart;
94039e00950SLois Curfman McInnes 
94139e00950SLois Curfman McInnes   if (!aij->assembled)
94239e00950SLois Curfman McInnes     SETERR(1,"MatGetRow_MPIAIJ: Must assemble matrix first.");
94339e00950SLois Curfman McInnes   if (row < rstart || row >= rend)
94439e00950SLois Curfman McInnes     SETERR(1,"MatGetRow_MPIAIJ: Currently you can get only the local rows.")
94539e00950SLois Curfman McInnes 
94639e00950SLois Curfman McInnes   ierr = MatGetRow(A,row,&nzA,&cworkA,&vworkA);	CHKERR(ierr);
94739e00950SLois Curfman McInnes   for (i=0; i<nzA; i++) cworkA[i] += cstart;
94839e00950SLois Curfman McInnes   ierr = MatGetRow(B,row,&nzB,&cworkB,&vworkB);	CHKERR(ierr);
94939e00950SLois Curfman McInnes   for (i=0; i<nzB; i++) {
95039e00950SLois Curfman McInnes       printf("i=%d, invcolmap[i]=%d, cwork=%d, vwork=%g\n",
95139e00950SLois Curfman McInnes                i, aij->invcolmap[i], cworkB[i], vworkB[i] );
95239e00950SLois Curfman McInnes /*    cworkB[i] = aij->invcolmap[cworkB[i]]; */
95339e00950SLois Curfman McInnes    }
95439e00950SLois Curfman McInnes 
95539e00950SLois Curfman McInnes   if (nztot = nzA + nzB) {
95639e00950SLois Curfman McInnes     *idx = (int *) MALLOC( (nztot)*sizeof(int) ); CHKPTR(*idx);
95739e00950SLois Curfman McInnes     *v   = (Scalar *) MALLOC( (nztot)*sizeof(Scalar) ); CHKPTR(*v);
95839e00950SLois Curfman McInnes     for ( i=0; i<nzA; i++ ) {
95939e00950SLois Curfman McInnes       (*idx)[i] = cworkA[i];
96039e00950SLois Curfman McInnes       (*v)[i] = vworkA[i];
96139e00950SLois Curfman McInnes     }
96239e00950SLois Curfman McInnes     for ( i=0; i<nzB; i++ ) {
96339e00950SLois Curfman McInnes       (*idx)[i+nzA] = cworkB[i];
96439e00950SLois Curfman McInnes       (*v)[i] = vworkB[i];
96539e00950SLois Curfman McInnes     }
96639e00950SLois Curfman McInnes   }
96739e00950SLois Curfman McInnes   else {*idx = 0; *v=0;}
96839e00950SLois Curfman McInnes   *nz = nztot;
96939e00950SLois Curfman McInnes   ierr = MatRestoreRow(A,row,&nzA,&cworkA,&vworkA);	CHKERR(ierr);
97039e00950SLois Curfman McInnes   ierr = MatRestoreRow(B,row,&nzB,&cworkB,&vworkB);	CHKERR(ierr);
97139e00950SLois Curfman McInnes   return 0;
97239e00950SLois Curfman McInnes }
97339e00950SLois Curfman McInnes 
97439e00950SLois Curfman McInnes static int MatRestoreRow_MPIAIJ(Mat mat,int row,int *nz,int **idx,Scalar **v)
97539e00950SLois Curfman McInnes {
97639e00950SLois Curfman McInnes   if (*idx) FREE(*idx);
97739e00950SLois Curfman McInnes   if (*v) FREE(*v);
97839e00950SLois Curfman McInnes   return 0;
97939e00950SLois Curfman McInnes }
98039e00950SLois Curfman McInnes 
98144a69424SLois Curfman McInnes static int MatCopy_MPIAIJ(Mat,Mat *);
98244a69424SLois Curfman McInnes extern int MatConvert_MPIAIJ(Mat,MATTYPE,Mat *);
983d6dfbf8fSBarry Smith 
9848a729477SBarry Smith /* -------------------------------------------------------------------*/
98544a69424SLois Curfman McInnes static struct _MatOps MatOps = {MatInsertValues_MPIAIJ,
98639e00950SLois Curfman McInnes        MatGetRow_MPIAIJ,MatRestoreRow_MPIAIJ,
98744a69424SLois Curfman McInnes        MatMult_MPIAIJ,MatMultAdd_MPIAIJ,
98844a69424SLois Curfman McInnes        MatMultTrans_MPIAIJ,MatMultTransAdd_MPIAIJ,
9891eb62cbbSBarry Smith        0,0,0,0,
9908a729477SBarry Smith        0,0,
99144a69424SLois Curfman McInnes        MatRelax_MPIAIJ,
9928a729477SBarry Smith        0,
9931eb62cbbSBarry Smith        0,0,0,
99444a69424SLois Curfman McInnes        MatCopy_MPIAIJ,
99544a69424SLois Curfman McInnes        MatGetDiag_MPIAIJ,0,0,
99644a69424SLois Curfman McInnes        MatBeginAssemble_MPIAIJ,MatEndAssemble_MPIAIJ,
9971eb62cbbSBarry Smith        0,
99844a69424SLois Curfman McInnes        MatInsOpt_MPIAIJ,MatZero_MPIAIJ,MatZeroRows_MPIAIJ,0,
999c74985f6SBarry Smith        0,0,0,0,
100044a69424SLois Curfman McInnes        MatSize_MPIAIJ,MatLocalSize_MPIAIJ,MatRange_MPIAIJ,
100177915d1cSLois Curfman McInnes        0,0,
100244a69424SLois Curfman McInnes        0,MatConvert_MPIAIJ };
10038a729477SBarry Smith 
10048a729477SBarry Smith /*@
10058a729477SBarry Smith 
10061eb62cbbSBarry Smith       MatCreateMPIAIJ - Creates a sparse parallel matrix
10071eb62cbbSBarry Smith                                  in AIJ format.
10088a729477SBarry Smith 
10098a729477SBarry Smith   Input Parameters:
10101eb62cbbSBarry Smith .   comm - MPI communicator
10111eb62cbbSBarry Smith .   m,n - number of local rows and columns (or -1 to have calculated)
10121eb62cbbSBarry Smith .   M,N - global rows and columns (or -1 to have calculated)
10131eb62cbbSBarry Smith .   d_nz - total number nonzeros in diagonal portion of matrix
10141eb62cbbSBarry Smith .   d_nzz - number of nonzeros per row in diagonal portion of matrix or null
10158a729477SBarry Smith .           You must leave room for the diagonal entry even if it is zero.
10161eb62cbbSBarry Smith .   o_nz - total number nonzeros in off-diagonal portion of matrix
10171eb62cbbSBarry Smith .   o_nzz - number of nonzeros per row in off-diagonal portion of matrix
10181eb62cbbSBarry Smith .           or null. You must have at least one nonzero per row.
10198a729477SBarry Smith 
10208a729477SBarry Smith   Output parameters:
10218a729477SBarry Smith .  newmat - the matrix
10228a729477SBarry Smith 
10231eb62cbbSBarry Smith   Keywords: matrix, aij, compressed row, sparse, parallel
10248a729477SBarry Smith @*/
10251eb62cbbSBarry Smith int MatCreateMPIAIJ(MPI_Comm comm,int m,int n,int M,int N,
10261eb62cbbSBarry Smith                  int d_nz,int *d_nnz, int o_nz,int *o_nnz,Mat *newmat)
10278a729477SBarry Smith {
10288a729477SBarry Smith   Mat          mat;
102944a69424SLois Curfman McInnes   Mat_MPIAIJ   *aij;
10306abc6512SBarry Smith   int          ierr, i,sum[2],work[2];
10318a729477SBarry Smith   *newmat         = 0;
103244a69424SLois Curfman McInnes   PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATMPIAIJ,comm);
1033a5a9c739SBarry Smith   PLogObjectCreate(mat);
103444a69424SLois Curfman McInnes   mat->data       = (void *) (aij = NEW(Mat_MPIAIJ)); CHKPTR(aij);
10358a729477SBarry Smith   mat->ops        = &MatOps;
103644a69424SLois Curfman McInnes   mat->destroy    = MatDestroy_MPIAIJ;
103744a69424SLois Curfman McInnes   mat->view       = MatView_MPIAIJ;
10388a729477SBarry Smith   mat->factor     = 0;
10398a729477SBarry Smith   mat->row        = 0;
10408a729477SBarry Smith   mat->col        = 0;
1041d6dfbf8fSBarry Smith 
1042d6dfbf8fSBarry Smith   mat->comm       = comm;
10431eb62cbbSBarry Smith   aij->insertmode = NotSetValues;
10441eb62cbbSBarry Smith   MPI_Comm_rank(comm,&aij->mytid);
10451eb62cbbSBarry Smith   MPI_Comm_size(comm,&aij->numtids);
10461eb62cbbSBarry Smith 
10471eb62cbbSBarry Smith   if (M == -1 || N == -1) {
10481eb62cbbSBarry Smith     work[0] = m; work[1] = n;
1049d6dfbf8fSBarry Smith     MPI_Allreduce((void *) work,(void *) sum,2,MPI_INT,MPI_SUM,comm );
10501eb62cbbSBarry Smith     if (M == -1) M = sum[0];
10511eb62cbbSBarry Smith     if (N == -1) N = sum[1];
10521eb62cbbSBarry Smith   }
10531eb62cbbSBarry Smith   if (m == -1) {m = M/aij->numtids + ((M % aij->numtids) > aij->mytid);}
10541eb62cbbSBarry Smith   if (n == -1) {n = N/aij->numtids + ((N % aij->numtids) > aij->mytid);}
10558a729477SBarry Smith   aij->m       = m;
10568a729477SBarry Smith   aij->n       = n;
10571eb62cbbSBarry Smith   aij->N       = N;
10581eb62cbbSBarry Smith   aij->M       = M;
10591eb62cbbSBarry Smith 
10601eb62cbbSBarry Smith   /* build local table of row and column ownerships */
10611eb62cbbSBarry Smith   aij->rowners = (int *) MALLOC(2*(aij->numtids+2)*sizeof(int));
10621eb62cbbSBarry Smith   CHKPTR(aij->rowners);
10631eb62cbbSBarry Smith   aij->cowners = aij->rowners + aij->numtids + 1;
10641eb62cbbSBarry Smith   MPI_Allgather(&m,1,MPI_INT,aij->rowners+1,1,MPI_INT,comm);
10651eb62cbbSBarry Smith   aij->rowners[0] = 0;
10661eb62cbbSBarry Smith   for ( i=2; i<=aij->numtids; i++ ) {
10671eb62cbbSBarry Smith     aij->rowners[i] += aij->rowners[i-1];
10688a729477SBarry Smith   }
10691eb62cbbSBarry Smith   aij->rstart = aij->rowners[aij->mytid];
10701eb62cbbSBarry Smith   aij->rend   = aij->rowners[aij->mytid+1];
10711eb62cbbSBarry Smith   MPI_Allgather(&n,1,MPI_INT,aij->cowners+1,1,MPI_INT,comm);
10721eb62cbbSBarry Smith   aij->cowners[0] = 0;
10731eb62cbbSBarry Smith   for ( i=2; i<=aij->numtids; i++ ) {
10741eb62cbbSBarry Smith     aij->cowners[i] += aij->cowners[i-1];
10758a729477SBarry Smith   }
10761eb62cbbSBarry Smith   aij->cstart = aij->cowners[aij->mytid];
10771eb62cbbSBarry Smith   aij->cend   = aij->cowners[aij->mytid+1];
10788a729477SBarry Smith 
10798a729477SBarry Smith 
10801eb62cbbSBarry Smith   ierr = MatCreateSequentialAIJ(m,n,d_nz,d_nnz,&aij->A); CHKERR(ierr);
1081a5a9c739SBarry Smith   PLogObjectParent(mat,aij->A);
10821eb62cbbSBarry Smith   ierr = MatCreateSequentialAIJ(m,N,o_nz,o_nnz,&aij->B); CHKERR(ierr);
1083a5a9c739SBarry Smith   PLogObjectParent(mat,aij->B);
10848a729477SBarry Smith 
10851eb62cbbSBarry Smith   /* build cache for off array entries formed */
10861eb62cbbSBarry Smith   aij->stash.nmax = CHUNCKSIZE; /* completely arbratray number */
10871eb62cbbSBarry Smith   aij->stash.n    = 0;
10881eb62cbbSBarry Smith   aij->stash.array = (Scalar *) MALLOC( aij->stash.nmax*(2*sizeof(int) +
10891eb62cbbSBarry Smith                             sizeof(Scalar))); CHKPTR(aij->stash.array);
10901eb62cbbSBarry Smith   aij->stash.idx = (int *) (aij->stash.array + aij->stash.nmax);
10911eb62cbbSBarry Smith   aij->stash.idy = (int *) (aij->stash.idx + aij->stash.nmax);
10929e25ed09SBarry Smith   aij->colmap    = 0;
10939e25ed09SBarry Smith   aij->garray    = 0;
10948a729477SBarry Smith 
10951eb62cbbSBarry Smith   /* stuff used for matrix vector multiply */
10961eb62cbbSBarry Smith   aij->lvec      = 0;
10971eb62cbbSBarry Smith   aij->Mvctx     = 0;
1098d6dfbf8fSBarry Smith   aij->assembled = 0;
10998a729477SBarry Smith 
1100d6dfbf8fSBarry Smith   *newmat = mat;
1101d6dfbf8fSBarry Smith   return 0;
1102d6dfbf8fSBarry Smith }
1103c74985f6SBarry Smith 
110444a69424SLois Curfman McInnes static int MatCopy_MPIAIJ(Mat matin,Mat *newmat)
1105d6dfbf8fSBarry Smith {
1106d6dfbf8fSBarry Smith   Mat        mat;
110744a69424SLois Curfman McInnes   Mat_MPIAIJ *aij,*oldmat = (Mat_MPIAIJ *) matin->data;
11086abc6512SBarry Smith   int        ierr;
1109d6dfbf8fSBarry Smith   *newmat      = 0;
1110d6dfbf8fSBarry Smith 
1111d6dfbf8fSBarry Smith   if (!oldmat->assembled) SETERR(1,"Cannot copy unassembled matrix");
111244a69424SLois Curfman McInnes   PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATMPIAIJ,matin->comm);
1113a5a9c739SBarry Smith   PLogObjectCreate(mat);
111444a69424SLois Curfman McInnes   mat->data       = (void *) (aij = NEW(Mat_MPIAIJ)); CHKPTR(aij);
1115d6dfbf8fSBarry Smith   mat->ops        = &MatOps;
111644a69424SLois Curfman McInnes   mat->destroy    = MatDestroy_MPIAIJ;
111744a69424SLois Curfman McInnes   mat->view       = MatView_MPIAIJ;
1118d6dfbf8fSBarry Smith   mat->factor     = matin->factor;
1119d6dfbf8fSBarry Smith   mat->row        = 0;
1120d6dfbf8fSBarry Smith   mat->col        = 0;
1121d6dfbf8fSBarry Smith 
1122d6dfbf8fSBarry Smith   aij->m          = oldmat->m;
1123d6dfbf8fSBarry Smith   aij->n          = oldmat->n;
1124d6dfbf8fSBarry Smith   aij->M          = oldmat->M;
1125d6dfbf8fSBarry Smith   aij->N          = oldmat->N;
1126d6dfbf8fSBarry Smith 
1127d6dfbf8fSBarry Smith   aij->assembled  = 1;
1128d6dfbf8fSBarry Smith   aij->rstart     = oldmat->rstart;
1129d6dfbf8fSBarry Smith   aij->rend       = oldmat->rend;
1130d6dfbf8fSBarry Smith   aij->cstart     = oldmat->cstart;
1131d6dfbf8fSBarry Smith   aij->cend       = oldmat->cend;
1132d6dfbf8fSBarry Smith   aij->numtids    = oldmat->numtids;
1133d6dfbf8fSBarry Smith   aij->mytid      = oldmat->mytid;
1134d6dfbf8fSBarry Smith   aij->insertmode = NotSetValues;
1135d6dfbf8fSBarry Smith 
1136d6dfbf8fSBarry Smith   aij->rowners    = (int *) MALLOC( (aij->numtids+1)*sizeof(int) );
1137d6dfbf8fSBarry Smith   CHKPTR(aij->rowners);
1138d6dfbf8fSBarry Smith   MEMCPY(aij->rowners,oldmat->rowners,(aij->numtids+1)*sizeof(int));
1139d6dfbf8fSBarry Smith   aij->stash.nmax = 0;
1140d6dfbf8fSBarry Smith   aij->stash.n    = 0;
1141d6dfbf8fSBarry Smith   aij->stash.array= 0;
11429e25ed09SBarry Smith   aij->colmap     = 0;
11439e25ed09SBarry Smith   aij->garray     = 0;
1144d6dfbf8fSBarry Smith   mat->comm       = matin->comm;
1145d6dfbf8fSBarry Smith 
1146d6dfbf8fSBarry Smith   ierr =  VecCreate(oldmat->lvec,&aij->lvec); CHKERR(ierr);
1147a5a9c739SBarry Smith   PLogObjectParent(mat,aij->lvec);
1148d6dfbf8fSBarry Smith   ierr =  VecScatterCtxCopy(oldmat->Mvctx,&aij->Mvctx); CHKERR(ierr);
1149a5a9c739SBarry Smith   PLogObjectParent(mat,aij->Mvctx);
1150d6dfbf8fSBarry Smith   ierr =  MatCopy(oldmat->A,&aij->A); CHKERR(ierr);
1151a5a9c739SBarry Smith   PLogObjectParent(mat,aij->A);
1152d6dfbf8fSBarry Smith   ierr =  MatCopy(oldmat->B,&aij->B); CHKERR(ierr);
1153a5a9c739SBarry Smith   PLogObjectParent(mat,aij->B);
11548a729477SBarry Smith   *newmat = mat;
11558a729477SBarry Smith   return 0;
11568a729477SBarry Smith }
1157