1cb512458SBarry Smith #ifndef lint 2*da69df5fSBarry Smith static char vcid[] = "$Id: mpiaij.c,v 1.12 1995/03/23 01:05:37 curfman Exp bsmith $"; 3cb512458SBarry Smith #endif 48a729477SBarry Smith 51eb62cbbSBarry Smith #include "mpiaij.h" 68a729477SBarry Smith #include "vec/vecimpl.h" 7d6dfbf8fSBarry Smith #include "inline/spops.h" 88a729477SBarry Smith 91eb62cbbSBarry Smith #define CHUNCKSIZE 100 101eb62cbbSBarry Smith /* 111eb62cbbSBarry Smith This is a simple minded stash. Do a linear search to determine if 121eb62cbbSBarry Smith in stash, if not add to end. 131eb62cbbSBarry Smith */ 141eb62cbbSBarry Smith static int StashValues(Stash *stash,int row,int n, int *idxn, 151eb62cbbSBarry Smith Scalar *values,InsertMode addv) 168a729477SBarry Smith { 171eb62cbbSBarry Smith int i,j,N = stash->n,found,*n_idx, *n_idy; 181eb62cbbSBarry Smith Scalar val,*n_array; 198a729477SBarry Smith 201eb62cbbSBarry Smith for ( i=0; i<n; i++ ) { 211eb62cbbSBarry Smith found = 0; 221eb62cbbSBarry Smith val = *values++; 238a729477SBarry Smith for ( j=0; j<N; j++ ) { 241eb62cbbSBarry Smith if ( stash->idx[j] == row && stash->idy[j] == idxn[i]) { 251eb62cbbSBarry Smith /* found a match */ 261eb62cbbSBarry Smith if (addv == AddValues) stash->array[j] += val; 271eb62cbbSBarry Smith else stash->array[j] = val; 281eb62cbbSBarry Smith found = 1; 298a729477SBarry Smith break; 308a729477SBarry Smith } 318a729477SBarry Smith } 321eb62cbbSBarry Smith if (!found) { /* not found so add to end */ 331eb62cbbSBarry Smith if ( stash->n == stash->nmax ) { 341eb62cbbSBarry Smith /* allocate a larger stash */ 351eb62cbbSBarry Smith n_array = (Scalar *) MALLOC( (stash->nmax + CHUNCKSIZE)*( 361eb62cbbSBarry Smith 2*sizeof(int) + sizeof(Scalar))); 371eb62cbbSBarry Smith CHKPTR(n_array); 381eb62cbbSBarry Smith n_idx = (int *) (n_array + stash->nmax + CHUNCKSIZE); 391eb62cbbSBarry Smith n_idy = (int *) (n_idx + stash->nmax + CHUNCKSIZE); 401eb62cbbSBarry Smith MEMCPY(n_array,stash->array,stash->nmax*sizeof(Scalar)); 411eb62cbbSBarry Smith MEMCPY(n_idx,stash->idx,stash->nmax*sizeof(int)); 421eb62cbbSBarry Smith MEMCPY(n_idy,stash->idy,stash->nmax*sizeof(int)); 431eb62cbbSBarry Smith if (stash->array) FREE(stash->array); 441eb62cbbSBarry Smith stash->array = n_array; stash->idx = n_idx; stash->idy = n_idy; 451eb62cbbSBarry Smith stash->nmax += CHUNCKSIZE; 461eb62cbbSBarry Smith } 471eb62cbbSBarry Smith stash->array[stash->n] = val; 481eb62cbbSBarry Smith stash->idx[stash->n] = row; 491eb62cbbSBarry Smith stash->idy[stash->n++] = idxn[i]; 501eb62cbbSBarry Smith } 518a729477SBarry Smith } 528a729477SBarry Smith return 0; 538a729477SBarry Smith } 548a729477SBarry Smith 559e25ed09SBarry Smith /* local utility routine that creates a mapping from the global column 569e25ed09SBarry Smith number to the local number in the off-diagonal part of the local 579e25ed09SBarry Smith storage of the matrix. This is done in a non scable way since the 589e25ed09SBarry Smith length of colmap equals the global matrix length. 599e25ed09SBarry Smith */ 609e25ed09SBarry Smith static int CreateColmap(Mat mat) 619e25ed09SBarry Smith { 629e25ed09SBarry Smith Matimpiaij *aij = (Matimpiaij *) mat->data; 639e25ed09SBarry Smith Matiaij *B = (Matiaij*) aij->B->data; 649e25ed09SBarry Smith int n = B->n,i; 659e25ed09SBarry Smith aij->colmap = (int *) MALLOC( aij->N*sizeof(int) ); CHKPTR(aij->colmap); 669e25ed09SBarry Smith MEMSET(aij->colmap,0,aij->N*sizeof(int)); 679e25ed09SBarry Smith for ( i=0; i<n; i++ ) { 689e25ed09SBarry Smith aij->colmap[aij->garray[i]] = i+1; 699e25ed09SBarry Smith } 709e25ed09SBarry Smith return 0; 719e25ed09SBarry Smith } 729e25ed09SBarry Smith 731eb62cbbSBarry Smith static int MatiAIJInsertValues(Mat mat,int m,int *idxm,int n, 741eb62cbbSBarry Smith int *idxn,Scalar *v,InsertMode addv) 758a729477SBarry Smith { 761eb62cbbSBarry Smith Matimpiaij *aij = (Matimpiaij *) mat->data; 771eb62cbbSBarry Smith int ierr,i,j, rstart = aij->rstart, rend = aij->rend; 781eb62cbbSBarry Smith int cstart = aij->cstart, cend = aij->cend,row,col; 798a729477SBarry Smith 801eb62cbbSBarry Smith if (aij->insertmode != NotSetValues && aij->insertmode != addv) { 811eb62cbbSBarry Smith SETERR(1,"You cannot mix inserts and adds"); 828a729477SBarry Smith } 831eb62cbbSBarry Smith aij->insertmode = addv; 848a729477SBarry Smith for ( i=0; i<m; i++ ) { 85da3a660dSBarry Smith if (idxm[i] < 0) SETERR(1,"Negative row index"); 86da3a660dSBarry Smith if (idxm[i] >= aij->M) SETERR(1,"Row index too large"); 871eb62cbbSBarry Smith if (idxm[i] >= rstart && idxm[i] < rend) { 881eb62cbbSBarry Smith row = idxm[i] - rstart; 891eb62cbbSBarry Smith for ( j=0; j<n; j++ ) { 90da3a660dSBarry Smith if (idxn[j] < 0) SETERR(1,"Negative column index"); 91da3a660dSBarry Smith if (idxn[j] >= aij->N) SETERR(1,"Column index too large"); 921eb62cbbSBarry Smith if (idxn[j] >= cstart && idxn[j] < cend){ 931eb62cbbSBarry Smith col = idxn[j] - cstart; 941eb62cbbSBarry Smith ierr = MatSetValues(aij->A,1,&row,1,&col,v+i*n+j,addv);CHKERR(ierr); 951eb62cbbSBarry Smith } 961eb62cbbSBarry Smith else { 97d6dfbf8fSBarry Smith if (aij->assembled) { 989e25ed09SBarry Smith if (!aij->colmap) {ierr = CreateColmap(mat); CHKERR(ierr);} 999e25ed09SBarry Smith col = aij->colmap[idxn[j]] - 1; 1009e25ed09SBarry Smith if (col < 0) { 1019e25ed09SBarry Smith SETERR(1,"Cannot insert new off diagonal block nonzero in\ 1029e25ed09SBarry Smith already\ 103d6dfbf8fSBarry Smith assembled matrix. Contact petsc-maint@mcs.anl.gov\ 104d6dfbf8fSBarry Smith if your need this feature"); 105d6dfbf8fSBarry Smith } 1069e25ed09SBarry Smith } 1079e25ed09SBarry Smith else col = idxn[j]; 1081eb62cbbSBarry Smith ierr = MatSetValues(aij->B,1,&row,1,&col,v+i*n+j,addv);CHKERR(ierr); 1091eb62cbbSBarry Smith } 1101eb62cbbSBarry Smith } 1111eb62cbbSBarry Smith } 1121eb62cbbSBarry Smith else { 1131eb62cbbSBarry Smith ierr = StashValues(&aij->stash,idxm[i],n,idxn,v+i*n,addv);CHKERR(ierr); 1141eb62cbbSBarry Smith } 1158a729477SBarry Smith } 1168a729477SBarry Smith return 0; 1178a729477SBarry Smith } 1188a729477SBarry Smith 1198a729477SBarry Smith /* 1201eb62cbbSBarry Smith the assembly code is alot like the code for vectors, we should 1211eb62cbbSBarry Smith sometime derive a single assembly code that can be used for 1221eb62cbbSBarry Smith either case. 1238a729477SBarry Smith */ 1248a729477SBarry Smith 1251eb62cbbSBarry Smith static int MatiAIJBeginAssemble(Mat mat) 1268a729477SBarry Smith { 1271eb62cbbSBarry Smith Matimpiaij *aij = (Matimpiaij *) mat->data; 128d6dfbf8fSBarry Smith MPI_Comm comm = mat->comm; 1296abc6512SBarry Smith int numtids = aij->numtids, *owners = aij->rowners; 1301eb62cbbSBarry Smith int mytid = aij->mytid; 1311eb62cbbSBarry Smith MPI_Request *send_waits,*recv_waits; 1326abc6512SBarry Smith int *nprocs,i,j,idx,*procs,nsends,nreceives,nmax,*work; 1331eb62cbbSBarry Smith int tag = 50, *owner,*starts,count; 1341eb62cbbSBarry Smith InsertMode addv; 1351eb62cbbSBarry Smith Scalar *rvalues,*svalues; 1361eb62cbbSBarry Smith 1371eb62cbbSBarry Smith /* make sure all processors are either in INSERTMODE or ADDMODE */ 13828988994SBarry Smith MPI_Allreduce((void *) &aij->insertmode,(void *) &addv,1,MPI_INT, 1391eb62cbbSBarry Smith MPI_BOR,comm); 1401eb62cbbSBarry Smith if (addv == (AddValues|InsertValues)) { 1411eb62cbbSBarry Smith SETERR(1,"Some processors have inserted while others have added"); 1421eb62cbbSBarry Smith } 1431eb62cbbSBarry Smith aij->insertmode = addv; /* in case this processor had no cache */ 1441eb62cbbSBarry Smith 1451eb62cbbSBarry Smith /* first count number of contributors to each processor */ 1461eb62cbbSBarry Smith nprocs = (int *) MALLOC( 2*numtids*sizeof(int) ); CHKPTR(nprocs); 1471eb62cbbSBarry Smith MEMSET(nprocs,0,2*numtids*sizeof(int)); procs = nprocs + numtids; 1481eb62cbbSBarry Smith owner = (int *) MALLOC( (aij->stash.n+1)*sizeof(int) ); CHKPTR(owner); 1491eb62cbbSBarry Smith for ( i=0; i<aij->stash.n; i++ ) { 1501eb62cbbSBarry Smith idx = aij->stash.idx[i]; 1511eb62cbbSBarry Smith for ( j=0; j<numtids; j++ ) { 1521eb62cbbSBarry Smith if (idx >= owners[j] && idx < owners[j+1]) { 1531eb62cbbSBarry Smith nprocs[j]++; procs[j] = 1; owner[i] = j; break; 1548a729477SBarry Smith } 1558a729477SBarry Smith } 1568a729477SBarry Smith } 1571eb62cbbSBarry Smith nsends = 0; for ( i=0; i<numtids; i++ ) { nsends += procs[i];} 1581eb62cbbSBarry Smith 1591eb62cbbSBarry Smith /* inform other processors of number of messages and max length*/ 1601eb62cbbSBarry Smith work = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(work); 1611eb62cbbSBarry Smith MPI_Allreduce((void *) procs,(void *) work,numtids,MPI_INT,MPI_SUM,comm); 1621eb62cbbSBarry Smith nreceives = work[mytid]; 1631eb62cbbSBarry Smith MPI_Allreduce((void *) nprocs,(void *) work,numtids,MPI_INT,MPI_MAX,comm); 1641eb62cbbSBarry Smith nmax = work[mytid]; 1651eb62cbbSBarry Smith FREE(work); 1661eb62cbbSBarry Smith 1671eb62cbbSBarry Smith /* post receives: 1681eb62cbbSBarry Smith 1) each message will consist of ordered pairs 1691eb62cbbSBarry Smith (global index,value) we store the global index as a double 170d6dfbf8fSBarry Smith to simplify the message passing. 1711eb62cbbSBarry Smith 2) since we don't know how long each individual message is we 1721eb62cbbSBarry Smith allocate the largest needed buffer for each receive. Potentially 1731eb62cbbSBarry Smith this is a lot of wasted space. 1741eb62cbbSBarry Smith 1751eb62cbbSBarry Smith 1761eb62cbbSBarry Smith This could be done better. 1771eb62cbbSBarry Smith */ 17828988994SBarry Smith rvalues = (Scalar *) MALLOC(3*(nreceives+1)*(nmax+1)*sizeof(Scalar)); 1791eb62cbbSBarry Smith CHKPTR(rvalues); 1801eb62cbbSBarry Smith recv_waits = (MPI_Request *) MALLOC((nreceives+1)*sizeof(MPI_Request)); 1811eb62cbbSBarry Smith CHKPTR(recv_waits); 1821eb62cbbSBarry Smith for ( i=0; i<nreceives; i++ ) { 1831eb62cbbSBarry Smith MPI_Irecv((void *)(rvalues+3*nmax*i),3*nmax,MPI_SCALAR,MPI_ANY_SOURCE,tag, 1841eb62cbbSBarry Smith comm,recv_waits+i); 1851eb62cbbSBarry Smith } 1861eb62cbbSBarry Smith 1871eb62cbbSBarry Smith /* do sends: 1881eb62cbbSBarry Smith 1) starts[i] gives the starting index in svalues for stuff going to 1891eb62cbbSBarry Smith the ith processor 1901eb62cbbSBarry Smith */ 1911eb62cbbSBarry Smith svalues = (Scalar *) MALLOC( 3*(aij->stash.n+1)*sizeof(Scalar) ); 1921eb62cbbSBarry Smith CHKPTR(svalues); 1931eb62cbbSBarry Smith send_waits = (MPI_Request *) MALLOC( (nsends+1)*sizeof(MPI_Request)); 1941eb62cbbSBarry Smith CHKPTR(send_waits); 1951eb62cbbSBarry Smith starts = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(starts); 1961eb62cbbSBarry Smith starts[0] = 0; 1971eb62cbbSBarry Smith for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 1981eb62cbbSBarry Smith for ( i=0; i<aij->stash.n; i++ ) { 1991eb62cbbSBarry Smith svalues[3*starts[owner[i]]] = (Scalar) aij->stash.idx[i]; 2001eb62cbbSBarry Smith svalues[3*starts[owner[i]]+1] = (Scalar) aij->stash.idy[i]; 2011eb62cbbSBarry Smith svalues[3*(starts[owner[i]]++)+2] = aij->stash.array[i]; 2021eb62cbbSBarry Smith } 2031eb62cbbSBarry Smith FREE(owner); 2041eb62cbbSBarry Smith starts[0] = 0; 2051eb62cbbSBarry Smith for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 2061eb62cbbSBarry Smith count = 0; 2071eb62cbbSBarry Smith for ( i=0; i<numtids; i++ ) { 2081eb62cbbSBarry Smith if (procs[i]) { 2091eb62cbbSBarry Smith MPI_Isend((void*)(svalues+3*starts[i]),3*nprocs[i],MPI_SCALAR,i,tag, 2101eb62cbbSBarry Smith comm,send_waits+count++); 2111eb62cbbSBarry Smith } 2121eb62cbbSBarry Smith } 2131eb62cbbSBarry Smith FREE(starts); FREE(nprocs); 2141eb62cbbSBarry Smith 2151eb62cbbSBarry Smith /* Free cache space */ 2161eb62cbbSBarry Smith aij->stash.nmax = aij->stash.n = 0; 2171eb62cbbSBarry Smith if (aij->stash.array){ FREE(aij->stash.array); aij->stash.array = 0;} 2181eb62cbbSBarry Smith 2191eb62cbbSBarry Smith aij->svalues = svalues; aij->rvalues = rvalues; 2201eb62cbbSBarry Smith aij->nsends = nsends; aij->nrecvs = nreceives; 2211eb62cbbSBarry Smith aij->send_waits = send_waits; aij->recv_waits = recv_waits; 2221eb62cbbSBarry Smith aij->rmax = nmax; 2231eb62cbbSBarry Smith 2241eb62cbbSBarry Smith return 0; 2251eb62cbbSBarry Smith } 2261eb62cbbSBarry Smith extern int MPIAIJSetUpMultiply(Mat); 2271eb62cbbSBarry Smith 2281eb62cbbSBarry Smith static int MatiAIJEndAssemble(Mat mat) 2291eb62cbbSBarry Smith { 2301eb62cbbSBarry Smith int ierr; 2311eb62cbbSBarry Smith Matimpiaij *aij = (Matimpiaij *) mat->data; 2321eb62cbbSBarry Smith 2331eb62cbbSBarry Smith MPI_Status *send_status,recv_status; 2346abc6512SBarry Smith int imdex,nrecvs = aij->nrecvs, count = nrecvs, i, n; 2351eb62cbbSBarry Smith int row,col; 2361eb62cbbSBarry Smith Scalar *values,val; 2371eb62cbbSBarry Smith InsertMode addv = aij->insertmode; 2381eb62cbbSBarry Smith 2391eb62cbbSBarry Smith /* wait on receives */ 2401eb62cbbSBarry Smith while (count) { 241d6dfbf8fSBarry Smith MPI_Waitany(nrecvs,aij->recv_waits,&imdex,&recv_status); 2421eb62cbbSBarry Smith /* unpack receives into our local space */ 243d6dfbf8fSBarry Smith values = aij->rvalues + 3*imdex*aij->rmax; 2441eb62cbbSBarry Smith MPI_Get_count(&recv_status,MPI_SCALAR,&n); 2451eb62cbbSBarry Smith n = n/3; 2461eb62cbbSBarry Smith for ( i=0; i<n; i++ ) { 2471eb62cbbSBarry Smith row = (int) PETSCREAL(values[3*i]) - aij->rstart; 2481eb62cbbSBarry Smith col = (int) PETSCREAL(values[3*i+1]); 2491eb62cbbSBarry Smith val = values[3*i+2]; 2501eb62cbbSBarry Smith if (col >= aij->cstart && col < aij->cend) { 2511eb62cbbSBarry Smith col -= aij->cstart; 2521eb62cbbSBarry Smith MatSetValues(aij->A,1,&row,1,&col,&val,addv); 2531eb62cbbSBarry Smith } 2541eb62cbbSBarry Smith else { 255d6dfbf8fSBarry Smith if (aij->assembled) { 2569e25ed09SBarry Smith if (!aij->colmap) {ierr = CreateColmap(mat); CHKERR(ierr);} 2579e25ed09SBarry Smith col = aij->colmap[col] - 1; 2589e25ed09SBarry Smith if (col < 0) { 2599e25ed09SBarry Smith SETERR(1,"Cannot insert new off diagonal block nonzero in\ 2609e25ed09SBarry Smith already\ 261d6dfbf8fSBarry Smith assembled matrix. Contact petsc-maint@mcs.anl.gov\ 262d6dfbf8fSBarry Smith if your need this feature"); 263d6dfbf8fSBarry Smith } 2649e25ed09SBarry Smith } 2651eb62cbbSBarry Smith MatSetValues(aij->B,1,&row,1,&col,&val,addv); 2661eb62cbbSBarry Smith } 2671eb62cbbSBarry Smith } 2681eb62cbbSBarry Smith count--; 2691eb62cbbSBarry Smith } 2701eb62cbbSBarry Smith FREE(aij->recv_waits); FREE(aij->rvalues); 2711eb62cbbSBarry Smith 2721eb62cbbSBarry Smith /* wait on sends */ 2731eb62cbbSBarry Smith if (aij->nsends) { 2741eb62cbbSBarry Smith send_status = (MPI_Status *) MALLOC( aij->nsends*sizeof(MPI_Status) ); 2751eb62cbbSBarry Smith CHKPTR(send_status); 2761eb62cbbSBarry Smith MPI_Waitall(aij->nsends,aij->send_waits,send_status); 2771eb62cbbSBarry Smith FREE(send_status); 2781eb62cbbSBarry Smith } 2791eb62cbbSBarry Smith FREE(aij->send_waits); FREE(aij->svalues); 2801eb62cbbSBarry Smith 2811eb62cbbSBarry Smith aij->insertmode = NotSetValues; 2821eb62cbbSBarry Smith ierr = MatBeginAssembly(aij->A); CHKERR(ierr); 2831eb62cbbSBarry Smith ierr = MatEndAssembly(aij->A); CHKERR(ierr); 2841eb62cbbSBarry Smith 2859e25ed09SBarry Smith if (!aij->assembled) { 2861eb62cbbSBarry Smith ierr = MPIAIJSetUpMultiply(mat); CHKERR(ierr); 2879e25ed09SBarry Smith } 2881eb62cbbSBarry Smith ierr = MatBeginAssembly(aij->B); CHKERR(ierr); 2891eb62cbbSBarry Smith ierr = MatEndAssembly(aij->B); CHKERR(ierr); 290d6dfbf8fSBarry Smith 291d6dfbf8fSBarry Smith aij->assembled = 1; 2928a729477SBarry Smith return 0; 2938a729477SBarry Smith } 2948a729477SBarry Smith 2951eb62cbbSBarry Smith static int MatiZero(Mat A) 2961eb62cbbSBarry Smith { 2971eb62cbbSBarry Smith Matimpiaij *l = (Matimpiaij *) A->data; 2981eb62cbbSBarry Smith 2991eb62cbbSBarry Smith MatZeroEntries(l->A); MatZeroEntries(l->B); 3001eb62cbbSBarry Smith return 0; 3011eb62cbbSBarry Smith } 3021eb62cbbSBarry Smith 3031eb62cbbSBarry Smith /* again this uses the same basic stratagy as in the assembly and 3041eb62cbbSBarry Smith scatter create routines, we should try to do it systemamatically 3051eb62cbbSBarry Smith if we can figure out the proper level of generality. */ 3061eb62cbbSBarry Smith 3071eb62cbbSBarry Smith /* the code does not do the diagonal entries correctly unless the 3081eb62cbbSBarry Smith matrix is square and the column and row owerships are identical. 3091eb62cbbSBarry Smith This is a BUG. The only way to fix it seems to be to access 3101eb62cbbSBarry Smith aij->A and aij->B directly and not through the MatZeroRows() 3111eb62cbbSBarry Smith routine. 3121eb62cbbSBarry Smith */ 3131eb62cbbSBarry Smith static int MatiZerorows(Mat A,IS is,Scalar *diag) 3141eb62cbbSBarry Smith { 3151eb62cbbSBarry Smith Matimpiaij *l = (Matimpiaij *) A->data; 3161eb62cbbSBarry Smith int i,ierr,N, *rows,*owners = l->rowners,numtids = l->numtids; 3176abc6512SBarry Smith int *procs,*nprocs,j,found,idx,nsends,*work; 3181eb62cbbSBarry Smith int nmax,*svalues,*starts,*owner,nrecvs,mytid = l->mytid; 3196abc6512SBarry Smith int *rvalues,tag = 67,count,base,slen,n,*source; 320d6dfbf8fSBarry Smith int *lens,imdex,*lrows,*values; 321d6dfbf8fSBarry Smith MPI_Comm comm = A->comm; 3221eb62cbbSBarry Smith MPI_Request *send_waits,*recv_waits; 3231eb62cbbSBarry Smith MPI_Status recv_status,*send_status; 3241eb62cbbSBarry Smith IS istmp; 3251eb62cbbSBarry Smith 326da3a660dSBarry Smith if (!l->assembled) SETERR(1,"MatiZerorows: must assmble matrix first"); 3271eb62cbbSBarry Smith ierr = ISGetLocalSize(is,&N); CHKERR(ierr); 3281eb62cbbSBarry Smith ierr = ISGetIndices(is,&rows); CHKERR(ierr); 3291eb62cbbSBarry Smith 3301eb62cbbSBarry Smith /* first count number of contributors to each processor */ 3311eb62cbbSBarry Smith nprocs = (int *) MALLOC( 2*numtids*sizeof(int) ); CHKPTR(nprocs); 3321eb62cbbSBarry Smith MEMSET(nprocs,0,2*numtids*sizeof(int)); procs = nprocs + numtids; 3331eb62cbbSBarry Smith owner = (int *) MALLOC((N+1)*sizeof(int)); CHKPTR(owner); /* see note*/ 3341eb62cbbSBarry Smith for ( i=0; i<N; i++ ) { 3351eb62cbbSBarry Smith idx = rows[i]; 3361eb62cbbSBarry Smith found = 0; 3371eb62cbbSBarry Smith for ( j=0; j<numtids; j++ ) { 3381eb62cbbSBarry Smith if (idx >= owners[j] && idx < owners[j+1]) { 3391eb62cbbSBarry Smith nprocs[j]++; procs[j] = 1; owner[i] = j; found = 1; break; 3401eb62cbbSBarry Smith } 3411eb62cbbSBarry Smith } 342d6dfbf8fSBarry Smith if (!found) SETERR(1,"Imdex out of range"); 3431eb62cbbSBarry Smith } 3441eb62cbbSBarry Smith nsends = 0; for ( i=0; i<numtids; i++ ) { nsends += procs[i];} 3451eb62cbbSBarry Smith 3461eb62cbbSBarry Smith /* inform other processors of number of messages and max length*/ 3471eb62cbbSBarry Smith work = (int *) MALLOC( numtids*sizeof(int) ); CHKPTR(work); 3481eb62cbbSBarry Smith MPI_Allreduce((void *) procs,(void *) work,numtids,MPI_INT,MPI_SUM,comm); 3491eb62cbbSBarry Smith nrecvs = work[mytid]; 3501eb62cbbSBarry Smith MPI_Allreduce((void *) nprocs,(void *) work,numtids,MPI_INT,MPI_MAX,comm); 3511eb62cbbSBarry Smith nmax = work[mytid]; 3521eb62cbbSBarry Smith FREE(work); 3531eb62cbbSBarry Smith 3541eb62cbbSBarry Smith /* post receives: */ 35528988994SBarry Smith rvalues = (int *) MALLOC((nrecvs+1)*(nmax+1)*sizeof(int)); /*see note */ 3561eb62cbbSBarry Smith CHKPTR(rvalues); 3571eb62cbbSBarry Smith recv_waits = (MPI_Request *) MALLOC((nrecvs+1)*sizeof(MPI_Request)); 3581eb62cbbSBarry Smith CHKPTR(recv_waits); 3591eb62cbbSBarry Smith for ( i=0; i<nrecvs; i++ ) { 3601eb62cbbSBarry Smith MPI_Irecv((void *)(rvalues+nmax*i),nmax,MPI_INT,MPI_ANY_SOURCE,tag, 3611eb62cbbSBarry Smith comm,recv_waits+i); 3621eb62cbbSBarry Smith } 3631eb62cbbSBarry Smith 3641eb62cbbSBarry Smith /* do sends: 3651eb62cbbSBarry Smith 1) starts[i] gives the starting index in svalues for stuff going to 3661eb62cbbSBarry Smith the ith processor 3671eb62cbbSBarry Smith */ 3681eb62cbbSBarry Smith svalues = (int *) MALLOC( (N+1)*sizeof(int) ); CHKPTR(svalues); 3691eb62cbbSBarry Smith send_waits = (MPI_Request *) MALLOC( (nsends+1)*sizeof(MPI_Request)); 3701eb62cbbSBarry Smith CHKPTR(send_waits); 3711eb62cbbSBarry Smith starts = (int *) MALLOC( (numtids+1)*sizeof(int) ); CHKPTR(starts); 3721eb62cbbSBarry Smith starts[0] = 0; 3731eb62cbbSBarry Smith for ( i=1; i<numtids; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 3741eb62cbbSBarry Smith for ( i=0; i<N; i++ ) { 3751eb62cbbSBarry Smith svalues[starts[owner[i]]++] = rows[i]; 3761eb62cbbSBarry Smith } 3771eb62cbbSBarry Smith ISRestoreIndices(is,&rows); 3781eb62cbbSBarry Smith 3791eb62cbbSBarry Smith starts[0] = 0; 3801eb62cbbSBarry Smith for ( i=1; i<numtids+1; i++ ) { starts[i] = starts[i-1] + nprocs[i-1];} 3811eb62cbbSBarry Smith count = 0; 3821eb62cbbSBarry Smith for ( i=0; i<numtids; i++ ) { 3831eb62cbbSBarry Smith if (procs[i]) { 3841eb62cbbSBarry Smith MPI_Isend((void*)(svalues+starts[i]),nprocs[i],MPI_INT,i,tag, 3851eb62cbbSBarry Smith comm,send_waits+count++); 3861eb62cbbSBarry Smith } 3871eb62cbbSBarry Smith } 3881eb62cbbSBarry Smith FREE(starts); 3891eb62cbbSBarry Smith 3901eb62cbbSBarry Smith base = owners[mytid]; 3911eb62cbbSBarry Smith 3921eb62cbbSBarry Smith /* wait on receives */ 3931eb62cbbSBarry Smith lens = (int *) MALLOC( 2*(nrecvs+1)*sizeof(int) ); CHKPTR(lens); 3941eb62cbbSBarry Smith source = lens + nrecvs; 3951eb62cbbSBarry Smith count = nrecvs; slen = 0; 3961eb62cbbSBarry Smith while (count) { 397d6dfbf8fSBarry Smith MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status); 3981eb62cbbSBarry Smith /* unpack receives into our local space */ 3991eb62cbbSBarry Smith MPI_Get_count(&recv_status,MPI_INT,&n); 400d6dfbf8fSBarry Smith source[imdex] = recv_status.MPI_SOURCE; 401d6dfbf8fSBarry Smith lens[imdex] = n; 4021eb62cbbSBarry Smith slen += n; 4031eb62cbbSBarry Smith count--; 4041eb62cbbSBarry Smith } 4051eb62cbbSBarry Smith FREE(recv_waits); 4061eb62cbbSBarry Smith 4071eb62cbbSBarry Smith /* move the data into the send scatter */ 4081eb62cbbSBarry Smith lrows = (int *) MALLOC( slen*sizeof(int) ); CHKPTR(lrows); 4091eb62cbbSBarry Smith count = 0; 4101eb62cbbSBarry Smith for ( i=0; i<nrecvs; i++ ) { 4111eb62cbbSBarry Smith values = rvalues + i*nmax; 4121eb62cbbSBarry Smith for ( j=0; j<lens[i]; j++ ) { 4131eb62cbbSBarry Smith lrows[count++] = values[j] - base; 4141eb62cbbSBarry Smith } 4151eb62cbbSBarry Smith } 4161eb62cbbSBarry Smith FREE(rvalues); FREE(lens); 4171eb62cbbSBarry Smith FREE(owner); FREE(nprocs); 4181eb62cbbSBarry Smith 4191eb62cbbSBarry Smith /* actually zap the local rows */ 4201eb62cbbSBarry Smith ierr = ISCreateSequential(slen,lrows,&istmp); CHKERR(ierr); FREE(lrows); 4211eb62cbbSBarry Smith ierr = MatZeroRows(l->A,istmp,diag); CHKERR(ierr); 4221eb62cbbSBarry Smith ierr = MatZeroRows(l->B,istmp,0); CHKERR(ierr); 4231eb62cbbSBarry Smith ierr = ISDestroy(istmp); CHKERR(ierr); 4241eb62cbbSBarry Smith 4251eb62cbbSBarry Smith /* wait on sends */ 4261eb62cbbSBarry Smith if (nsends) { 4271eb62cbbSBarry Smith send_status = (MPI_Status *) MALLOC( nsends*sizeof(MPI_Status) ); 4281eb62cbbSBarry Smith CHKPTR(send_status); 4291eb62cbbSBarry Smith MPI_Waitall(nsends,send_waits,send_status); 4301eb62cbbSBarry Smith FREE(send_status); 4311eb62cbbSBarry Smith } 4321eb62cbbSBarry Smith FREE(send_waits); FREE(svalues); 4331eb62cbbSBarry Smith 4341eb62cbbSBarry Smith 4351eb62cbbSBarry Smith return 0; 4361eb62cbbSBarry Smith } 4371eb62cbbSBarry Smith 4381eb62cbbSBarry Smith static int MatiAIJMult(Mat aijin,Vec xx,Vec yy) 4391eb62cbbSBarry Smith { 4401eb62cbbSBarry Smith Matimpiaij *aij = (Matimpiaij *) aijin->data; 4411eb62cbbSBarry Smith int ierr; 442da3a660dSBarry Smith if (!aij->assembled) SETERR(1,"MatiAIJMul: must assmble matrix first"); 443d6dfbf8fSBarry Smith ierr = VecScatterBegin(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx); 4441eb62cbbSBarry Smith CHKERR(ierr); 4451eb62cbbSBarry Smith ierr = MatMult(aij->A,xx,yy); CHKERR(ierr); 446d6dfbf8fSBarry Smith ierr = VecScatterEnd(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx); 447d6dfbf8fSBarry Smith CHKERR(ierr); 4481eb62cbbSBarry Smith ierr = MatMultAdd(aij->B,aij->lvec,yy,yy); CHKERR(ierr); 4491eb62cbbSBarry Smith return 0; 4501eb62cbbSBarry Smith } 4511eb62cbbSBarry Smith 452da3a660dSBarry Smith static int MatiAIJMultadd(Mat aijin,Vec xx,Vec yy,Vec zz) 453da3a660dSBarry Smith { 454da3a660dSBarry Smith Matimpiaij *aij = (Matimpiaij *) aijin->data; 455da3a660dSBarry Smith int ierr; 456da3a660dSBarry Smith if (!aij->assembled) SETERR(1,"MatiAIJMul: must assmble matrix first"); 457da3a660dSBarry Smith ierr = VecScatterBegin(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx); 458da3a660dSBarry Smith CHKERR(ierr); 459da3a660dSBarry Smith ierr = MatMultAdd(aij->A,xx,yy,zz); CHKERR(ierr); 460da3a660dSBarry Smith ierr = VecScatterEnd(xx,0,aij->lvec,0,InsertValues,ScatterAll,aij->Mvctx); 461da3a660dSBarry Smith CHKERR(ierr); 462da3a660dSBarry Smith ierr = MatMultAdd(aij->B,aij->lvec,zz,zz); CHKERR(ierr); 463da3a660dSBarry Smith return 0; 464da3a660dSBarry Smith } 465da3a660dSBarry Smith 466da3a660dSBarry Smith static int MatiAIJMultTrans(Mat aijin,Vec xx,Vec yy) 467da3a660dSBarry Smith { 468da3a660dSBarry Smith Matimpiaij *aij = (Matimpiaij *) aijin->data; 469da3a660dSBarry Smith int ierr; 470da3a660dSBarry Smith 471da3a660dSBarry Smith if (!aij->assembled) SETERR(1,"MatiAIJMulTrans: must assmble matrix first"); 472da3a660dSBarry Smith /* do nondiagonal part */ 473da3a660dSBarry Smith ierr = MatMultTrans(aij->B,xx,aij->lvec); CHKERR(ierr); 474da3a660dSBarry Smith /* send it on its way */ 475da3a660dSBarry Smith ierr = VecScatterBegin(aij->lvec,0,yy,0,AddValues, 476da3a660dSBarry Smith ScatterAll|ScatterReverse,aij->Mvctx); CHKERR(ierr); 477da3a660dSBarry Smith /* do local part */ 478da3a660dSBarry Smith ierr = MatMultTrans(aij->A,xx,yy); CHKERR(ierr); 479da3a660dSBarry Smith /* receive remote parts: note this assumes the values are not actually */ 480da3a660dSBarry Smith /* inserted in yy until the next line, which is true for my implementation*/ 481da3a660dSBarry Smith /* but is not perhaps always true. */ 482da3a660dSBarry Smith ierr = VecScatterEnd(aij->lvec,0,yy,0,AddValues,ScatterAll|ScatterReverse, 483da3a660dSBarry Smith aij->Mvctx); CHKERR(ierr); 484da3a660dSBarry Smith return 0; 485da3a660dSBarry Smith } 486da3a660dSBarry Smith 487da3a660dSBarry Smith static int MatiAIJMultTransadd(Mat aijin,Vec xx,Vec yy,Vec zz) 488da3a660dSBarry Smith { 489da3a660dSBarry Smith Matimpiaij *aij = (Matimpiaij *) aijin->data; 490da3a660dSBarry Smith int ierr; 491da3a660dSBarry Smith 492da3a660dSBarry Smith if (!aij->assembled) SETERR(1,"MatiAIJMulTrans: must assmble matrix first"); 493da3a660dSBarry Smith /* do nondiagonal part */ 494da3a660dSBarry Smith ierr = MatMultTrans(aij->B,xx,aij->lvec); CHKERR(ierr); 495da3a660dSBarry Smith /* send it on its way */ 496da3a660dSBarry Smith ierr = VecScatterBegin(aij->lvec,0,zz,0,AddValues, 497da3a660dSBarry Smith ScatterAll|ScatterReverse,aij->Mvctx); CHKERR(ierr); 498da3a660dSBarry Smith /* do local part */ 499da3a660dSBarry Smith ierr = MatMultTransAdd(aij->A,xx,yy,zz); CHKERR(ierr); 500da3a660dSBarry Smith /* receive remote parts: note this assumes the values are not actually */ 501da3a660dSBarry Smith /* inserted in yy until the next line, which is true for my implementation*/ 502da3a660dSBarry Smith /* but is not perhaps always true. */ 503da3a660dSBarry Smith ierr = VecScatterEnd(aij->lvec,0,zz,0,AddValues,ScatterAll|ScatterReverse, 504da3a660dSBarry Smith aij->Mvctx); CHKERR(ierr); 505da3a660dSBarry Smith return 0; 506da3a660dSBarry Smith } 507da3a660dSBarry Smith 5081eb62cbbSBarry Smith /* 5091eb62cbbSBarry Smith This only works correctly for square matrices where the subblock A->A is the 5101eb62cbbSBarry Smith diagonal block 5111eb62cbbSBarry Smith */ 5121eb62cbbSBarry Smith static int MatiAIJgetdiag(Mat Ain,Vec v) 5131eb62cbbSBarry Smith { 5141eb62cbbSBarry Smith Matimpiaij *A = (Matimpiaij *) Ain->data; 515da3a660dSBarry Smith if (!A->assembled) SETERR(1,"MatiAIJgetdiag: must assmble matrix first"); 5161eb62cbbSBarry Smith return MatGetDiagonal(A->A,v); 5171eb62cbbSBarry Smith } 5181eb62cbbSBarry Smith 5191eb62cbbSBarry Smith static int MatiAIJdestroy(PetscObject obj) 5201eb62cbbSBarry Smith { 5211eb62cbbSBarry Smith Mat mat = (Mat) obj; 5221eb62cbbSBarry Smith Matimpiaij *aij = (Matimpiaij *) mat->data; 5231eb62cbbSBarry Smith int ierr; 524a5a9c739SBarry Smith #if defined(PETSC_LOG) 525a5a9c739SBarry Smith PLogObjectState(obj,"Rows %d Cols %d",aij->M,aij->N); 526a5a9c739SBarry Smith #endif 5271eb62cbbSBarry Smith FREE(aij->rowners); 5281eb62cbbSBarry Smith ierr = MatDestroy(aij->A); CHKERR(ierr); 5291eb62cbbSBarry Smith ierr = MatDestroy(aij->B); CHKERR(ierr); 5309e25ed09SBarry Smith if (aij->colmap) FREE(aij->colmap); 5319e25ed09SBarry Smith if (aij->garray) FREE(aij->garray); 5321eb62cbbSBarry Smith if (aij->lvec) VecDestroy(aij->lvec); 5331eb62cbbSBarry Smith if (aij->Mvctx) VecScatterCtxDestroy(aij->Mvctx); 534a5a9c739SBarry Smith FREE(aij); 535a5a9c739SBarry Smith PLogObjectDestroy(mat); 536a5a9c739SBarry Smith PETSCHEADERDESTROY(mat); 5371eb62cbbSBarry Smith return 0; 5381eb62cbbSBarry Smith } 5391eb62cbbSBarry Smith 5401eb62cbbSBarry Smith static int MatiView(PetscObject obj,Viewer viewer) 5411eb62cbbSBarry Smith { 5421eb62cbbSBarry Smith Mat mat = (Mat) obj; 5431eb62cbbSBarry Smith Matimpiaij *aij = (Matimpiaij *) mat->data; 5441eb62cbbSBarry Smith int ierr; 5451eb62cbbSBarry Smith 546da3a660dSBarry Smith if (!aij->assembled) SETERR(1,"MatiAIJMulTrans: must assmble matrix first"); 547d6dfbf8fSBarry Smith MPE_Seq_begin(mat->comm,1); 548*da69df5fSBarry Smith ViewerPrintf(viewer,"[%d] rows %d starts %d ends %d cols %d starts %d ends %d\n", 5491eb62cbbSBarry Smith aij->mytid,aij->m,aij->rstart,aij->rend,aij->n,aij->cstart, 5501eb62cbbSBarry Smith aij->cend); 551*da69df5fSBarry Smith ierr = MatView(aij->A,viewer); CHKERR(ierr); 552*da69df5fSBarry Smith ierr = MatView(aij->B,viewer); CHKERR(ierr); 553*da69df5fSBarry Smith ViewerFlush(viewer); 554d6dfbf8fSBarry Smith MPE_Seq_end(mat->comm,1); 5551eb62cbbSBarry Smith return 0; 5561eb62cbbSBarry Smith } 5571eb62cbbSBarry Smith 558d6dfbf8fSBarry Smith extern int MatiAIJmarkdiag(Matiaij *); 5591eb62cbbSBarry Smith /* 5601eb62cbbSBarry Smith This has to provide several versions. 5611eb62cbbSBarry Smith 5621eb62cbbSBarry Smith 1) per sequential 5631eb62cbbSBarry Smith 2) a) use only local smoothing updating outer values only once. 5641eb62cbbSBarry Smith b) local smoothing updating outer values each inner iteration 565d6dfbf8fSBarry Smith 3) color updating out values betwen colors. 5661eb62cbbSBarry Smith */ 567d6dfbf8fSBarry Smith static int MatiAIJrelax(Mat matin,Vec bb,double omega,int flag,double shift, 5688a729477SBarry Smith int its,Vec xx) 5698a729477SBarry Smith { 5701eb62cbbSBarry Smith Matimpiaij *mat = (Matimpiaij *) matin->data; 571d6dfbf8fSBarry Smith Mat AA = mat->A, BB = mat->B; 572d6dfbf8fSBarry Smith Matiaij *A = (Matiaij *) AA->data, *B = (Matiaij *)BB->data; 5736abc6512SBarry Smith Scalar zero = 0.0,*b,*x,*xs,*ls,d,*v,sum,scale,*t,*ts; 5746abc6512SBarry Smith int ierr,*idx, *diag; 5756abc6512SBarry Smith int n = mat->n, m = mat->m, i; 576da3a660dSBarry Smith Vec tt; 5778a729477SBarry Smith 578da3a660dSBarry Smith if (!mat->assembled) SETERR(1,"MatiAIJRelax: must assmble matrix first"); 5791eb62cbbSBarry Smith 580d6dfbf8fSBarry Smith VecGetArray(xx,&x); VecGetArray(bb,&b); VecGetArray(mat->lvec,&ls); 581d6dfbf8fSBarry Smith xs = x -1; /* shift by one for index start of 1 */ 582da3a660dSBarry Smith ls--; 5836abc6512SBarry Smith if (!A->diag) {if ((ierr = MatiAIJmarkdiag(A))) return ierr;} 584d6dfbf8fSBarry Smith diag = A->diag; 585acb40c82SBarry Smith if (flag == SOR_APPLY_UPPER || flag == SOR_APPLY_LOWER) { 586acb40c82SBarry Smith SETERR(1,"That option not yet support for parallel AIJ matrices"); 587acb40c82SBarry Smith } 588da3a660dSBarry Smith if (flag & SOR_EISENSTAT) { 589da3a660dSBarry Smith /* Let A = L + U + D; where L is lower trianglar, 590da3a660dSBarry Smith U is upper triangular, E is diagonal; This routine applies 591da3a660dSBarry Smith 592da3a660dSBarry Smith (L + E)^{-1} A (U + E)^{-1} 593da3a660dSBarry Smith 594da3a660dSBarry Smith to a vector efficiently using Eisenstat's trick. This is for 595da3a660dSBarry Smith the case of SSOR preconditioner, so E is D/omega where omega 596da3a660dSBarry Smith is the relaxation factor. 597da3a660dSBarry Smith */ 598da3a660dSBarry Smith ierr = VecCreate(xx,&tt); CHKERR(ierr); 599da3a660dSBarry Smith VecGetArray(tt,&t); 600da3a660dSBarry Smith scale = (2.0/omega) - 1.0; 601da3a660dSBarry Smith /* x = (E + U)^{-1} b */ 602da3a660dSBarry Smith VecSet(&zero,mat->lvec); 603da3a660dSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp, 604da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 605da3a660dSBarry Smith for ( i=m-1; i>-1; i-- ) { 606da3a660dSBarry Smith n = A->i[i+1] - diag[i] - 1; 607da3a660dSBarry Smith idx = A->j + diag[i]; 608da3a660dSBarry Smith v = A->a + diag[i]; 609da3a660dSBarry Smith sum = b[i]; 610da3a660dSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 611da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 612da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 613da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 614da3a660dSBarry Smith v = B->a + B->i[i] - 1; 615da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 616da3a660dSBarry Smith x[i] = omega*(sum/d); 617da3a660dSBarry Smith } 618da3a660dSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp, 619da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 620da3a660dSBarry Smith 621da3a660dSBarry Smith /* t = b - (2*E - D)x */ 622da3a660dSBarry Smith v = A->a; 623da3a660dSBarry Smith for ( i=0; i<m; i++ ) { t[i] = b[i] - scale*(v[*diag++ - 1])*x[i]; } 624da3a660dSBarry Smith 625da3a660dSBarry Smith /* t = (E + L)^{-1}t */ 626da3a660dSBarry Smith ts = t - 1; /* shifted by one for index start of a or mat->j*/ 627da3a660dSBarry Smith diag = A->diag; 628da3a660dSBarry Smith VecSet(&zero,mat->lvec); 629da3a660dSBarry Smith ierr = VecPipelineBegin(tt,0,mat->lvec,0,InsertValues,PipelineDown, 630da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 631da3a660dSBarry Smith for ( i=0; i<m; i++ ) { 632da3a660dSBarry Smith n = diag[i] - A->i[i]; 633da3a660dSBarry Smith idx = A->j + A->i[i] - 1; 634da3a660dSBarry Smith v = A->a + A->i[i] - 1; 635da3a660dSBarry Smith sum = t[i]; 636da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ts,v,idx,n); 637da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 638da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 639da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 640da3a660dSBarry Smith v = B->a + B->i[i] - 1; 641da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 642da3a660dSBarry Smith t[i] = omega*(sum/d); 643da3a660dSBarry Smith } 644da3a660dSBarry Smith ierr = VecPipelineEnd(tt,0,mat->lvec,0,InsertValues,PipelineDown, 645da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 646da3a660dSBarry Smith /* x = x + t */ 647da3a660dSBarry Smith for ( i=0; i<m; i++ ) { x[i] += t[i]; } 648da3a660dSBarry Smith VecDestroy(tt); 649da3a660dSBarry Smith return 0; 650da3a660dSBarry Smith } 651da3a660dSBarry Smith 6521eb62cbbSBarry Smith 653d6dfbf8fSBarry Smith if ((flag & SOR_SYMMETRIC_SWEEP) == SOR_SYMMETRIC_SWEEP){ 654da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 655da3a660dSBarry Smith VecSet(&zero,mat->lvec); VecSet(&zero,xx); 656da3a660dSBarry Smith } 657da3a660dSBarry Smith else { 658d6dfbf8fSBarry Smith ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx); 659d6dfbf8fSBarry Smith CHKERR(ierr); 660d6dfbf8fSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx); 661d6dfbf8fSBarry Smith CHKERR(ierr); 662da3a660dSBarry Smith } 663d6dfbf8fSBarry Smith while (its--) { 664d6dfbf8fSBarry Smith /* go down through the rows */ 665d6dfbf8fSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown, 666d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 667d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 668d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 669d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 670d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 671d6dfbf8fSBarry Smith sum = b[i]; 672d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 673d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 674d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 675d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 676d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 677d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 678d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 679d6dfbf8fSBarry Smith } 680d6dfbf8fSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown, 681d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 682d6dfbf8fSBarry Smith /* come up through the rows */ 683d6dfbf8fSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp, 684d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 685d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 686d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 687d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 688d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 689d6dfbf8fSBarry Smith sum = b[i]; 690d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 691d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 692d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 693d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 694d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 695d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 696d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 697d6dfbf8fSBarry Smith } 698d6dfbf8fSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp, 699d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 700d6dfbf8fSBarry Smith } 701d6dfbf8fSBarry Smith } 702d6dfbf8fSBarry Smith else if (flag & SOR_FORWARD_SWEEP){ 703da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 704da3a660dSBarry Smith VecSet(&zero,mat->lvec); 705da3a660dSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown, 706da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 707da3a660dSBarry Smith for ( i=0; i<m; i++ ) { 708da3a660dSBarry Smith n = diag[i] - A->i[i]; 709da3a660dSBarry Smith idx = A->j + A->i[i] - 1; 710da3a660dSBarry Smith v = A->a + A->i[i] - 1; 711da3a660dSBarry Smith sum = b[i]; 712da3a660dSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 713da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 714da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 715da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 716da3a660dSBarry Smith v = B->a + B->i[i] - 1; 717da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 718da3a660dSBarry Smith x[i] = omega*(sum/d); 719da3a660dSBarry Smith } 720da3a660dSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown, 721da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 722da3a660dSBarry Smith its--; 723da3a660dSBarry Smith } 724d6dfbf8fSBarry Smith while (its--) { 725d6dfbf8fSBarry Smith ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx); 726d6dfbf8fSBarry Smith CHKERR(ierr); 727d6dfbf8fSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterUp,mat->Mvctx); 728d6dfbf8fSBarry Smith CHKERR(ierr); 729d6dfbf8fSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineDown, 730d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 731d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 732d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 733d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 734d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 735d6dfbf8fSBarry Smith sum = b[i]; 736d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 737d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 738d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 739d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 740d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 741d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 742d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 743d6dfbf8fSBarry Smith } 744d6dfbf8fSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineDown, 745d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 746d6dfbf8fSBarry Smith } 747d6dfbf8fSBarry Smith } 748d6dfbf8fSBarry Smith else if (flag & SOR_BACKWARD_SWEEP){ 749da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 750da3a660dSBarry Smith VecSet(&zero,mat->lvec); 751da3a660dSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp, 752da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 753da3a660dSBarry Smith for ( i=m-1; i>-1; i-- ) { 754da3a660dSBarry Smith n = A->i[i+1] - diag[i] - 1; 755da3a660dSBarry Smith idx = A->j + diag[i]; 756da3a660dSBarry Smith v = A->a + diag[i]; 757da3a660dSBarry Smith sum = b[i]; 758da3a660dSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 759da3a660dSBarry Smith d = shift + A->a[diag[i]-1]; 760da3a660dSBarry Smith n = B->i[i+1] - B->i[i]; 761da3a660dSBarry Smith idx = B->j + B->i[i] - 1; 762da3a660dSBarry Smith v = B->a + B->i[i] - 1; 763da3a660dSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 764da3a660dSBarry Smith x[i] = omega*(sum/d); 765da3a660dSBarry Smith } 766da3a660dSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp, 767da3a660dSBarry Smith mat->Mvctx); CHKERR(ierr); 768da3a660dSBarry Smith its--; 769da3a660dSBarry Smith } 770d6dfbf8fSBarry Smith while (its--) { 771d6dfbf8fSBarry Smith ierr = VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterDown, 772d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 773d6dfbf8fSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterDown, 774d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 775d6dfbf8fSBarry Smith ierr = VecPipelineBegin(xx,0,mat->lvec,0,InsertValues,PipelineUp, 776d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 777d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 778d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 779d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 780d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 781d6dfbf8fSBarry Smith sum = b[i]; 782d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 783d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 784d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 785d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 786d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 787d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 788d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 789d6dfbf8fSBarry Smith } 790d6dfbf8fSBarry Smith ierr = VecPipelineEnd(xx,0,mat->lvec,0,InsertValues,PipelineUp, 791d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 792d6dfbf8fSBarry Smith } 793d6dfbf8fSBarry Smith } 794d6dfbf8fSBarry Smith else if ((flag & SOR_LOCAL_SYMMETRIC_SWEEP) == SOR_LOCAL_SYMMETRIC_SWEEP){ 795da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 796da3a660dSBarry Smith return MatRelax(mat->A,bb,omega,flag,shift,its,xx); 797da3a660dSBarry Smith } 798d6dfbf8fSBarry Smith ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx); 799d6dfbf8fSBarry Smith CHKERR(ierr); 800d6dfbf8fSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx); 801d6dfbf8fSBarry Smith CHKERR(ierr); 802d6dfbf8fSBarry Smith while (its--) { 803d6dfbf8fSBarry Smith /* go down through the rows */ 804d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 805d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 806d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 807d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 808d6dfbf8fSBarry Smith sum = b[i]; 809d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 810d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 811d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 812d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 813d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 814d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 815d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 816d6dfbf8fSBarry Smith } 817d6dfbf8fSBarry Smith /* come up through the rows */ 818d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 819d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 820d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 821d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 822d6dfbf8fSBarry Smith sum = b[i]; 823d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 824d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 825d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 826d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 827d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 828d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 829d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 830d6dfbf8fSBarry Smith } 831d6dfbf8fSBarry Smith } 832d6dfbf8fSBarry Smith } 833d6dfbf8fSBarry Smith else if (flag & SOR_LOCAL_FORWARD_SWEEP){ 834da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 835da3a660dSBarry Smith return MatRelax(mat->A,bb,omega,flag,shift,its,xx); 836da3a660dSBarry Smith } 837d6dfbf8fSBarry Smith ierr=VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx); 838d6dfbf8fSBarry Smith CHKERR(ierr); 839d6dfbf8fSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll,mat->Mvctx); 840d6dfbf8fSBarry Smith CHKERR(ierr); 841d6dfbf8fSBarry Smith while (its--) { 842d6dfbf8fSBarry Smith for ( i=0; i<m; i++ ) { 843d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 844d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 845d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 846d6dfbf8fSBarry Smith sum = b[i]; 847d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 848d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 849d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 850d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 851d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 852d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 853d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 854d6dfbf8fSBarry Smith } 855d6dfbf8fSBarry Smith } 856d6dfbf8fSBarry Smith } 857d6dfbf8fSBarry Smith else if (flag & SOR_LOCAL_BACKWARD_SWEEP){ 858da3a660dSBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 859da3a660dSBarry Smith return MatRelax(mat->A,bb,omega,flag,shift,its,xx); 860da3a660dSBarry Smith } 861d6dfbf8fSBarry Smith ierr = VecScatterBegin(xx,0,mat->lvec,0,InsertValues,ScatterAll, 862d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 863d6dfbf8fSBarry Smith ierr = VecScatterEnd(xx,0,mat->lvec,0,InsertValues,ScatterAll, 864d6dfbf8fSBarry Smith mat->Mvctx); CHKERR(ierr); 865d6dfbf8fSBarry Smith while (its--) { 866d6dfbf8fSBarry Smith for ( i=m-1; i>-1; i-- ) { 867d6dfbf8fSBarry Smith n = A->i[i+1] - A->i[i]; 868d6dfbf8fSBarry Smith idx = A->j + A->i[i] - 1; 869d6dfbf8fSBarry Smith v = A->a + A->i[i] - 1; 870d6dfbf8fSBarry Smith sum = b[i]; 871d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,xs,v,idx,n); 872d6dfbf8fSBarry Smith d = shift + A->a[diag[i]-1]; 873d6dfbf8fSBarry Smith n = B->i[i+1] - B->i[i]; 874d6dfbf8fSBarry Smith idx = B->j + B->i[i] - 1; 875d6dfbf8fSBarry Smith v = B->a + B->i[i] - 1; 876d6dfbf8fSBarry Smith SPARSEDENSEMDOT(sum,ls,v,idx,n); 877d6dfbf8fSBarry Smith x[i] = (1. - omega)*x[i] + omega*(sum/d + x[i]); 878d6dfbf8fSBarry Smith } 879d6dfbf8fSBarry Smith } 880d6dfbf8fSBarry Smith } 8818a729477SBarry Smith return 0; 8828a729477SBarry Smith } 883c74985f6SBarry Smith static int MatiAIJinsopt(Mat aijin,int op) 884c74985f6SBarry Smith { 885c74985f6SBarry Smith Matimpiaij *aij = (Matimpiaij *) aijin->data; 886c74985f6SBarry Smith 887c74985f6SBarry Smith if (op == NO_NEW_NONZERO_LOCATIONS) { 888c74985f6SBarry Smith MatSetOption(aij->A,op); 889c74985f6SBarry Smith MatSetOption(aij->B,op); 890c74985f6SBarry Smith } 891c74985f6SBarry Smith else if (op == YES_NEW_NONZERO_LOCATIONS) { 892c74985f6SBarry Smith MatSetOption(aij->A,op); 893c74985f6SBarry Smith MatSetOption(aij->B,op); 894c74985f6SBarry Smith } 895c74985f6SBarry Smith else if (op == COLUMN_ORIENTED) SETERR(1,"Column oriented not supported"); 896c74985f6SBarry Smith return 0; 897c74985f6SBarry Smith } 898c74985f6SBarry Smith 899c74985f6SBarry Smith static int MatiAIJsize(Mat matin,int *m,int *n) 900c74985f6SBarry Smith { 901c74985f6SBarry Smith Matimpiaij *mat = (Matimpiaij *) matin->data; 902c74985f6SBarry Smith *m = mat->M; *n = mat->N; 903c74985f6SBarry Smith return 0; 904c74985f6SBarry Smith } 905c74985f6SBarry Smith 906c74985f6SBarry Smith static int MatiAIJlocalsize(Mat matin,int *m,int *n) 907c74985f6SBarry Smith { 908c74985f6SBarry Smith Matimpiaij *mat = (Matimpiaij *) matin->data; 909c74985f6SBarry Smith *m = mat->m; *n = mat->n; 910c74985f6SBarry Smith return 0; 911c74985f6SBarry Smith } 912c74985f6SBarry Smith 913c74985f6SBarry Smith static int MatiAIJrange(Mat matin,int *m,int *n) 914c74985f6SBarry Smith { 915c74985f6SBarry Smith Matimpiaij *mat = (Matimpiaij *) matin->data; 916c74985f6SBarry Smith *m = mat->rstart; *n = mat->rend; 917c74985f6SBarry Smith return 0; 918c74985f6SBarry Smith } 919c74985f6SBarry Smith 920d6dfbf8fSBarry Smith static int MatiCopy(Mat,Mat *); 92177915d1cSLois Curfman McInnes extern int MatiAIJMPIConvert(Mat,MATTYPE,Mat *); 922d6dfbf8fSBarry Smith 9238a729477SBarry Smith /* -------------------------------------------------------------------*/ 9241eb62cbbSBarry Smith static struct _MatOps MatOps = {MatiAIJInsertValues, 9258a729477SBarry Smith 0, 0, 926da3a660dSBarry Smith MatiAIJMult,MatiAIJMultadd,MatiAIJMultTrans,MatiAIJMultTransadd, 9271eb62cbbSBarry Smith 0,0,0,0, 9288a729477SBarry Smith 0,0, 9298a729477SBarry Smith MatiAIJrelax, 9308a729477SBarry Smith 0, 9311eb62cbbSBarry Smith 0,0,0, 932d6dfbf8fSBarry Smith MatiCopy, 9338a729477SBarry Smith MatiAIJgetdiag,0,0, 9341eb62cbbSBarry Smith MatiAIJBeginAssemble,MatiAIJEndAssemble, 9351eb62cbbSBarry Smith 0, 936c74985f6SBarry Smith MatiAIJinsopt,MatiZero,MatiZerorows,0, 937c74985f6SBarry Smith 0,0,0,0, 93877915d1cSLois Curfman McInnes MatiAIJsize,MatiAIJlocalsize,MatiAIJrange, 93977915d1cSLois Curfman McInnes 0,0, 94077915d1cSLois Curfman McInnes 0,MatiAIJMPIConvert }; 9418a729477SBarry Smith 9428a729477SBarry Smith 9438a729477SBarry Smith /*@ 9448a729477SBarry Smith 9451eb62cbbSBarry Smith MatCreateMPIAIJ - Creates a sparse parallel matrix 9461eb62cbbSBarry Smith in AIJ format. 9478a729477SBarry Smith 9488a729477SBarry Smith Input Parameters: 9491eb62cbbSBarry Smith . comm - MPI communicator 9501eb62cbbSBarry Smith . m,n - number of local rows and columns (or -1 to have calculated) 9511eb62cbbSBarry Smith . M,N - global rows and columns (or -1 to have calculated) 9521eb62cbbSBarry Smith . d_nz - total number nonzeros in diagonal portion of matrix 9531eb62cbbSBarry Smith . d_nzz - number of nonzeros per row in diagonal portion of matrix or null 9548a729477SBarry Smith . You must leave room for the diagonal entry even if it is zero. 9551eb62cbbSBarry Smith . o_nz - total number nonzeros in off-diagonal portion of matrix 9561eb62cbbSBarry Smith . o_nzz - number of nonzeros per row in off-diagonal portion of matrix 9571eb62cbbSBarry Smith . or null. You must have at least one nonzero per row. 9588a729477SBarry Smith 9598a729477SBarry Smith Output parameters: 9608a729477SBarry Smith . newmat - the matrix 9618a729477SBarry Smith 9621eb62cbbSBarry Smith Keywords: matrix, aij, compressed row, sparse, parallel 9638a729477SBarry Smith @*/ 9641eb62cbbSBarry Smith int MatCreateMPIAIJ(MPI_Comm comm,int m,int n,int M,int N, 9651eb62cbbSBarry Smith int d_nz,int *d_nnz, int o_nz,int *o_nnz,Mat *newmat) 9668a729477SBarry Smith { 9678a729477SBarry Smith Mat mat; 9681eb62cbbSBarry Smith Matimpiaij *aij; 9696abc6512SBarry Smith int ierr, i,sum[2],work[2]; 9708a729477SBarry Smith *newmat = 0; 971acb40c82SBarry Smith PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATAIJMPI,comm); 972a5a9c739SBarry Smith PLogObjectCreate(mat); 9731eb62cbbSBarry Smith mat->data = (void *) (aij = NEW(Matimpiaij)); CHKPTR(aij); 9748a729477SBarry Smith mat->ops = &MatOps; 9758a729477SBarry Smith mat->destroy = MatiAIJdestroy; 9761eb62cbbSBarry Smith mat->view = MatiView; 9778a729477SBarry Smith mat->factor = 0; 9788a729477SBarry Smith mat->row = 0; 9798a729477SBarry Smith mat->col = 0; 980d6dfbf8fSBarry Smith 981d6dfbf8fSBarry Smith mat->comm = comm; 9821eb62cbbSBarry Smith aij->insertmode = NotSetValues; 9831eb62cbbSBarry Smith MPI_Comm_rank(comm,&aij->mytid); 9841eb62cbbSBarry Smith MPI_Comm_size(comm,&aij->numtids); 9851eb62cbbSBarry Smith 9861eb62cbbSBarry Smith if (M == -1 || N == -1) { 9871eb62cbbSBarry Smith work[0] = m; work[1] = n; 988d6dfbf8fSBarry Smith MPI_Allreduce((void *) work,(void *) sum,2,MPI_INT,MPI_SUM,comm ); 9891eb62cbbSBarry Smith if (M == -1) M = sum[0]; 9901eb62cbbSBarry Smith if (N == -1) N = sum[1]; 9911eb62cbbSBarry Smith } 9921eb62cbbSBarry Smith if (m == -1) {m = M/aij->numtids + ((M % aij->numtids) > aij->mytid);} 9931eb62cbbSBarry Smith if (n == -1) {n = N/aij->numtids + ((N % aij->numtids) > aij->mytid);} 9948a729477SBarry Smith aij->m = m; 9958a729477SBarry Smith aij->n = n; 9961eb62cbbSBarry Smith aij->N = N; 9971eb62cbbSBarry Smith aij->M = M; 9981eb62cbbSBarry Smith 9991eb62cbbSBarry Smith /* build local table of row and column ownerships */ 10001eb62cbbSBarry Smith aij->rowners = (int *) MALLOC(2*(aij->numtids+2)*sizeof(int)); 10011eb62cbbSBarry Smith CHKPTR(aij->rowners); 10021eb62cbbSBarry Smith aij->cowners = aij->rowners + aij->numtids + 1; 10031eb62cbbSBarry Smith MPI_Allgather(&m,1,MPI_INT,aij->rowners+1,1,MPI_INT,comm); 10041eb62cbbSBarry Smith aij->rowners[0] = 0; 10051eb62cbbSBarry Smith for ( i=2; i<=aij->numtids; i++ ) { 10061eb62cbbSBarry Smith aij->rowners[i] += aij->rowners[i-1]; 10078a729477SBarry Smith } 10081eb62cbbSBarry Smith aij->rstart = aij->rowners[aij->mytid]; 10091eb62cbbSBarry Smith aij->rend = aij->rowners[aij->mytid+1]; 10101eb62cbbSBarry Smith MPI_Allgather(&n,1,MPI_INT,aij->cowners+1,1,MPI_INT,comm); 10111eb62cbbSBarry Smith aij->cowners[0] = 0; 10121eb62cbbSBarry Smith for ( i=2; i<=aij->numtids; i++ ) { 10131eb62cbbSBarry Smith aij->cowners[i] += aij->cowners[i-1]; 10148a729477SBarry Smith } 10151eb62cbbSBarry Smith aij->cstart = aij->cowners[aij->mytid]; 10161eb62cbbSBarry Smith aij->cend = aij->cowners[aij->mytid+1]; 10178a729477SBarry Smith 10188a729477SBarry Smith 10191eb62cbbSBarry Smith ierr = MatCreateSequentialAIJ(m,n,d_nz,d_nnz,&aij->A); CHKERR(ierr); 1020a5a9c739SBarry Smith PLogObjectParent(mat,aij->A); 10211eb62cbbSBarry Smith ierr = MatCreateSequentialAIJ(m,N,o_nz,o_nnz,&aij->B); CHKERR(ierr); 1022a5a9c739SBarry Smith PLogObjectParent(mat,aij->B); 10238a729477SBarry Smith 10241eb62cbbSBarry Smith /* build cache for off array entries formed */ 10251eb62cbbSBarry Smith aij->stash.nmax = CHUNCKSIZE; /* completely arbratray number */ 10261eb62cbbSBarry Smith aij->stash.n = 0; 10271eb62cbbSBarry Smith aij->stash.array = (Scalar *) MALLOC( aij->stash.nmax*(2*sizeof(int) + 10281eb62cbbSBarry Smith sizeof(Scalar))); CHKPTR(aij->stash.array); 10291eb62cbbSBarry Smith aij->stash.idx = (int *) (aij->stash.array + aij->stash.nmax); 10301eb62cbbSBarry Smith aij->stash.idy = (int *) (aij->stash.idx + aij->stash.nmax); 10319e25ed09SBarry Smith aij->colmap = 0; 10329e25ed09SBarry Smith aij->garray = 0; 10338a729477SBarry Smith 10341eb62cbbSBarry Smith /* stuff used for matrix vector multiply */ 10351eb62cbbSBarry Smith aij->lvec = 0; 10361eb62cbbSBarry Smith aij->Mvctx = 0; 1037d6dfbf8fSBarry Smith aij->assembled = 0; 10388a729477SBarry Smith 1039d6dfbf8fSBarry Smith *newmat = mat; 1040d6dfbf8fSBarry Smith return 0; 1041d6dfbf8fSBarry Smith } 1042c74985f6SBarry Smith 1043d6dfbf8fSBarry Smith static int MatiCopy(Mat matin,Mat *newmat) 1044d6dfbf8fSBarry Smith { 1045d6dfbf8fSBarry Smith Mat mat; 1046d6dfbf8fSBarry Smith Matimpiaij *aij,*oldmat = (Matimpiaij *) matin->data; 10476abc6512SBarry Smith int ierr; 1048d6dfbf8fSBarry Smith *newmat = 0; 1049d6dfbf8fSBarry Smith 1050d6dfbf8fSBarry Smith if (!oldmat->assembled) SETERR(1,"Cannot copy unassembled matrix"); 1051acb40c82SBarry Smith PETSCHEADERCREATE(mat,_Mat,MAT_COOKIE,MATAIJMPI,matin->comm); 1052a5a9c739SBarry Smith PLogObjectCreate(mat); 1053d6dfbf8fSBarry Smith mat->data = (void *) (aij = NEW(Matimpiaij)); CHKPTR(aij); 1054d6dfbf8fSBarry Smith mat->ops = &MatOps; 1055d6dfbf8fSBarry Smith mat->destroy = MatiAIJdestroy; 1056d6dfbf8fSBarry Smith mat->view = MatiView; 1057d6dfbf8fSBarry Smith mat->factor = matin->factor; 1058d6dfbf8fSBarry Smith mat->row = 0; 1059d6dfbf8fSBarry Smith mat->col = 0; 1060d6dfbf8fSBarry Smith 1061d6dfbf8fSBarry Smith aij->m = oldmat->m; 1062d6dfbf8fSBarry Smith aij->n = oldmat->n; 1063d6dfbf8fSBarry Smith aij->M = oldmat->M; 1064d6dfbf8fSBarry Smith aij->N = oldmat->N; 1065d6dfbf8fSBarry Smith 1066d6dfbf8fSBarry Smith aij->assembled = 1; 1067d6dfbf8fSBarry Smith aij->rstart = oldmat->rstart; 1068d6dfbf8fSBarry Smith aij->rend = oldmat->rend; 1069d6dfbf8fSBarry Smith aij->cstart = oldmat->cstart; 1070d6dfbf8fSBarry Smith aij->cend = oldmat->cend; 1071d6dfbf8fSBarry Smith aij->numtids = oldmat->numtids; 1072d6dfbf8fSBarry Smith aij->mytid = oldmat->mytid; 1073d6dfbf8fSBarry Smith aij->insertmode = NotSetValues; 1074d6dfbf8fSBarry Smith 1075d6dfbf8fSBarry Smith aij->rowners = (int *) MALLOC( (aij->numtids+1)*sizeof(int) ); 1076d6dfbf8fSBarry Smith CHKPTR(aij->rowners); 1077d6dfbf8fSBarry Smith MEMCPY(aij->rowners,oldmat->rowners,(aij->numtids+1)*sizeof(int)); 1078d6dfbf8fSBarry Smith aij->stash.nmax = 0; 1079d6dfbf8fSBarry Smith aij->stash.n = 0; 1080d6dfbf8fSBarry Smith aij->stash.array= 0; 10819e25ed09SBarry Smith aij->colmap = 0; 10829e25ed09SBarry Smith aij->garray = 0; 1083d6dfbf8fSBarry Smith mat->comm = matin->comm; 1084d6dfbf8fSBarry Smith 1085d6dfbf8fSBarry Smith ierr = VecCreate(oldmat->lvec,&aij->lvec); CHKERR(ierr); 1086a5a9c739SBarry Smith PLogObjectParent(mat,aij->lvec); 1087d6dfbf8fSBarry Smith ierr = VecScatterCtxCopy(oldmat->Mvctx,&aij->Mvctx); CHKERR(ierr); 1088a5a9c739SBarry Smith PLogObjectParent(mat,aij->Mvctx); 1089d6dfbf8fSBarry Smith ierr = MatCopy(oldmat->A,&aij->A); CHKERR(ierr); 1090a5a9c739SBarry Smith PLogObjectParent(mat,aij->A); 1091d6dfbf8fSBarry Smith ierr = MatCopy(oldmat->B,&aij->B); CHKERR(ierr); 1092a5a9c739SBarry Smith PLogObjectParent(mat,aij->B); 10938a729477SBarry Smith *newmat = mat; 10948a729477SBarry Smith return 0; 10958a729477SBarry Smith } 1096