1be1d678aSKris Buschelman #define PETSCMAT_DLL 2be1d678aSKris Buschelman 32499ec78SHong Zhang /* 42499ec78SHong Zhang Defines matrix-matrix product routines for pairs of MPIAIJ matrices 52499ec78SHong Zhang C = A * B 62499ec78SHong Zhang */ 72499ec78SHong Zhang #include "src/mat/impls/aij/seq/aij.h" /*I "petscmat.h" I*/ 82499ec78SHong Zhang #include "src/mat/utils/freespace.h" 92499ec78SHong Zhang #include "src/mat/impls/aij/mpi/mpiaij.h" 102499ec78SHong Zhang #include "petscbt.h" 112499ec78SHong Zhang 122499ec78SHong Zhang #undef __FUNCT__ 132499ec78SHong Zhang #define __FUNCT__ "MatMatMult_MPIAIJ_MPIAIJ" 142499ec78SHong Zhang PetscErrorCode MatMatMult_MPIAIJ_MPIAIJ(Mat A,Mat B,MatReuse scall,PetscReal fill, Mat *C) 152499ec78SHong Zhang { 162499ec78SHong Zhang PetscErrorCode ierr; 172499ec78SHong Zhang 182499ec78SHong Zhang PetscFunctionBegin; 192499ec78SHong Zhang if (scall == MAT_INITIAL_MATRIX){ 202499ec78SHong Zhang ierr = MatMatMultSymbolic_MPIAIJ_MPIAIJ(A,B,fill,C);CHKERRQ(ierr);/* numeric product is computed as well */ 212499ec78SHong Zhang } else if (scall == MAT_REUSE_MATRIX){ 222499ec78SHong Zhang ierr = MatMatMultNumeric_MPIAIJ_MPIAIJ(A,B,*C);CHKERRQ(ierr); 232499ec78SHong Zhang } else { 242499ec78SHong Zhang SETERRQ1(PETSC_ERR_ARG_WRONG,"Invalid MatReuse %d",(int)scall); 252499ec78SHong Zhang } 262499ec78SHong Zhang PetscFunctionReturn(0); 272499ec78SHong Zhang } 282499ec78SHong Zhang 29f33d1a9aSHong Zhang #undef __FUNCT__ 30f33d1a9aSHong Zhang #define __FUNCT__ "PetscObjectContainerDestroy_Mat_MatMatMultMPI" 319649163dSHong Zhang PetscErrorCode PetscObjectContainerDestroy_Mat_MatMatMultMPI(void *ptr) 32f33d1a9aSHong Zhang { 33f33d1a9aSHong Zhang PetscErrorCode ierr; 349649163dSHong Zhang Mat_MatMatMultMPI *mult=(Mat_MatMatMultMPI*)ptr; 35f33d1a9aSHong Zhang 36f33d1a9aSHong Zhang PetscFunctionBegin; 3705b42c5fSBarry Smith ierr = PetscFree(mult->startsj);CHKERRQ(ierr); 3805b42c5fSBarry Smith ierr = PetscFree(mult->bufa);CHKERRQ(ierr); 39f33d1a9aSHong Zhang if (mult->isrowa){ierr = ISDestroy(mult->isrowa);CHKERRQ(ierr);} 40f33d1a9aSHong Zhang if (mult->isrowb){ierr = ISDestroy(mult->isrowb);CHKERRQ(ierr);} 41f33d1a9aSHong Zhang if (mult->iscolb){ierr = ISDestroy(mult->iscolb);CHKERRQ(ierr);} 42f33d1a9aSHong Zhang if (mult->C_seq){ierr = MatDestroy(mult->C_seq);CHKERRQ(ierr);} 43f33d1a9aSHong Zhang if (mult->A_loc){ierr = MatDestroy(mult->A_loc);CHKERRQ(ierr); } 44f33d1a9aSHong Zhang if (mult->B_seq){ierr = MatDestroy(mult->B_seq);CHKERRQ(ierr);} 45f33d1a9aSHong Zhang if (mult->B_loc){ierr = MatDestroy(mult->B_loc);CHKERRQ(ierr);} 46f33d1a9aSHong Zhang if (mult->B_oth){ierr = MatDestroy(mult->B_oth);CHKERRQ(ierr);} 4705b42c5fSBarry Smith ierr = PetscFree(mult->abi);CHKERRQ(ierr); 4805b42c5fSBarry Smith ierr = PetscFree(mult->abj);CHKERRQ(ierr); 49f33d1a9aSHong Zhang ierr = PetscFree(mult);CHKERRQ(ierr); 50f33d1a9aSHong Zhang PetscFunctionReturn(0); 51f33d1a9aSHong Zhang } 52f33d1a9aSHong Zhang 534a7f9380SHong Zhang EXTERN PetscErrorCode MatDestroy_AIJ(Mat); 542499ec78SHong Zhang #undef __FUNCT__ 552499ec78SHong Zhang #define __FUNCT__ "MatDestroy_MPIAIJ_MatMatMult" 562499ec78SHong Zhang PetscErrorCode MatDestroy_MPIAIJ_MatMatMult(Mat A) 572499ec78SHong Zhang { 582499ec78SHong Zhang PetscErrorCode ierr; 599649163dSHong Zhang PetscObjectContainer container; 609649163dSHong Zhang Mat_MatMatMultMPI *mult=PETSC_NULL; 612499ec78SHong Zhang 622499ec78SHong Zhang PetscFunctionBegin; 639649163dSHong Zhang ierr = PetscObjectQuery((PetscObject)A,"Mat_MatMatMultMPI",(PetscObject *)&container);CHKERRQ(ierr); 649649163dSHong Zhang if (container) { 659649163dSHong Zhang ierr = PetscObjectContainerGetPointer(container,(void **)&mult);CHKERRQ(ierr); 669649163dSHong Zhang } else { 6716bf3c38SBarry Smith SETERRQ(PETSC_ERR_PLIB,"Container does not exit"); 689649163dSHong Zhang } 6916bf3c38SBarry Smith A->ops->destroy = mult->MatDestroy; 709649163dSHong Zhang ierr = PetscObjectCompose((PetscObject)A,"Mat_MatMatMultMPI",0);CHKERRQ(ierr); 71992edd73SBarry Smith ierr = (*A->ops->destroy)(A);CHKERRQ(ierr); 729649163dSHong Zhang ierr = PetscObjectContainerDestroy(container);CHKERRQ(ierr); 732499ec78SHong Zhang PetscFunctionReturn(0); 742499ec78SHong Zhang } 752499ec78SHong Zhang 762499ec78SHong Zhang #undef __FUNCT__ 77abf897f8SHong Zhang #define __FUNCT__ "MatDuplicate_MPIAIJ_MatMatMult" 78abf897f8SHong Zhang PetscErrorCode MatDuplicate_MPIAIJ_MatMatMult(Mat A, MatDuplicateOption op, Mat *M) { 79abf897f8SHong Zhang PetscErrorCode ierr; 80abf897f8SHong Zhang Mat_MatMatMultMPI *mult; 81abf897f8SHong Zhang PetscObjectContainer container; 82abf897f8SHong Zhang 83abf897f8SHong Zhang PetscFunctionBegin; 84abf897f8SHong Zhang ierr = PetscObjectQuery((PetscObject)A,"Mat_MatMatMultMPI",(PetscObject *)&container);CHKERRQ(ierr); 85abf897f8SHong Zhang if (container) { 86abf897f8SHong Zhang ierr = PetscObjectContainerGetPointer(container,(void **)&mult);CHKERRQ(ierr); 87abf897f8SHong Zhang } else { 88abf897f8SHong Zhang SETERRQ(PETSC_ERR_PLIB,"Container does not exit"); 89abf897f8SHong Zhang } 90abf897f8SHong Zhang ierr = (*mult->MatDuplicate)(A,op,M);CHKERRQ(ierr); 91abf897f8SHong Zhang (*M)->ops->destroy = mult->MatDestroy; /* =MatDestroy_MPIAIJ, *M doesn't duplicate A's container! */ 92abf897f8SHong Zhang (*M)->ops->duplicate = mult->MatDuplicate; /* =MatDuplicate_ MPIAIJ */ 93abf897f8SHong Zhang PetscFunctionReturn(0); 94abf897f8SHong Zhang } 95abf897f8SHong Zhang 96abf897f8SHong Zhang #undef __FUNCT__ 972499ec78SHong Zhang #define __FUNCT__ "MatMatMultSymbolic_MPIAIJ_MPIAIJ" 982499ec78SHong Zhang PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ(Mat A,Mat B,PetscReal fill,Mat *C) 992499ec78SHong Zhang { 1002499ec78SHong Zhang PetscErrorCode ierr; 1012499ec78SHong Zhang PetscInt start,end; 1022499ec78SHong Zhang Mat_MatMatMultMPI *mult; 1032499ec78SHong Zhang PetscObjectContainer container; 1042499ec78SHong Zhang 1052499ec78SHong Zhang PetscFunctionBegin; 106899cda47SBarry Smith if (A->cmap.rstart != B->rmap.rstart || A->cmap.rend != B->rmap.rend){ 107899cda47SBarry Smith SETERRQ4(PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, (%D, %D) != (%D,%D)",A->cmap.rstart,A->cmap.rend,B->rmap.rstart,B->rmap.rend); 1082499ec78SHong Zhang } 1092499ec78SHong Zhang ierr = PetscNew(Mat_MatMatMultMPI,&mult);CHKERRQ(ierr); 1102499ec78SHong Zhang 1112499ec78SHong Zhang /* create a seq matrix B_seq = submatrix of B by taking rows of B that equal to nonzero col of A */ 1122499ec78SHong Zhang ierr = MatGetBrowsOfAcols(A,B,MAT_INITIAL_MATRIX,&mult->isrowb,&mult->iscolb,&mult->brstart,&mult->B_seq);CHKERRQ(ierr); 1132499ec78SHong Zhang 1142499ec78SHong Zhang /* create a seq matrix A_seq = submatrix of A by taking all local rows of A */ 115899cda47SBarry Smith start = A->rmap.rstart; end = A->rmap.rend; 1162499ec78SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,end-start,start,1,&mult->isrowa);CHKERRQ(ierr); 1172499ec78SHong Zhang ierr = MatGetLocalMatCondensed(A,MAT_INITIAL_MATRIX,&mult->isrowa,&mult->isrowb,&mult->A_loc);CHKERRQ(ierr); 1182499ec78SHong Zhang 1192499ec78SHong Zhang /* compute C_seq = A_seq * B_seq */ 1202499ec78SHong Zhang ierr = MatMatMult_SeqAIJ_SeqAIJ(mult->A_loc,mult->B_seq,MAT_INITIAL_MATRIX,fill,&mult->C_seq);CHKERRQ(ierr); 1212499ec78SHong Zhang 1222499ec78SHong Zhang /* create mpi matrix C by concatinating C_seq */ 1232499ec78SHong Zhang ierr = PetscObjectReference((PetscObject)mult->C_seq);CHKERRQ(ierr); /* prevent C_seq being destroyed by MatMerge() */ 124899cda47SBarry Smith ierr = MatMerge(A->comm,mult->C_seq,B->cmap.n,MAT_INITIAL_MATRIX,C);CHKERRQ(ierr); 1252499ec78SHong Zhang 1262499ec78SHong Zhang /* attach the supporting struct to C for reuse of symbolic C */ 1272499ec78SHong Zhang ierr = PetscObjectContainerCreate(PETSC_COMM_SELF,&container);CHKERRQ(ierr); 1282499ec78SHong Zhang ierr = PetscObjectContainerSetPointer(container,mult);CHKERRQ(ierr); 129f33d1a9aSHong Zhang ierr = PetscObjectCompose((PetscObject)(*C),"Mat_MatMatMultMPI",(PetscObject)container);CHKERRQ(ierr); 1309649163dSHong Zhang ierr = PetscObjectContainerSetUserDestroy(container,PetscObjectContainerDestroy_Mat_MatMatMultMPI);CHKERRQ(ierr); 1314a7f9380SHong Zhang mult->MatDestroy = (*C)->ops->destroy; 132abf897f8SHong Zhang mult->MatDuplicate = (*C)->ops->duplicate; 1332499ec78SHong Zhang 1342499ec78SHong Zhang (*C)->ops->destroy = MatDestroy_MPIAIJ_MatMatMult; 135abf897f8SHong Zhang (*C)->ops->duplicate = MatDuplicate_MPIAIJ_MatMatMult; 1362499ec78SHong Zhang PetscFunctionReturn(0); 1372499ec78SHong Zhang } 1382499ec78SHong Zhang 1392499ec78SHong Zhang /* This routine is called ONLY in the case of reusing previously computed symbolic C */ 1402499ec78SHong Zhang #undef __FUNCT__ 1412499ec78SHong Zhang #define __FUNCT__ "MatMatMultNumeric_MPIAIJ_MPIAIJ" 1422499ec78SHong Zhang PetscErrorCode MatMatMultNumeric_MPIAIJ_MPIAIJ(Mat A,Mat B,Mat C) 1432499ec78SHong Zhang { 1442499ec78SHong Zhang PetscErrorCode ierr; 1452499ec78SHong Zhang Mat *seq; 1462499ec78SHong Zhang Mat_MatMatMultMPI *mult; 1472499ec78SHong Zhang PetscObjectContainer container; 1482499ec78SHong Zhang 1492499ec78SHong Zhang PetscFunctionBegin; 150f33d1a9aSHong Zhang ierr = PetscObjectQuery((PetscObject)C,"Mat_MatMatMultMPI",(PetscObject *)&container);CHKERRQ(ierr); 1512499ec78SHong Zhang if (container) { 1522499ec78SHong Zhang ierr = PetscObjectContainerGetPointer(container,(void **)&mult);CHKERRQ(ierr); 15316bf3c38SBarry Smith } else { 15416bf3c38SBarry Smith SETERRQ(PETSC_ERR_PLIB,"Container does not exit"); 1552499ec78SHong Zhang } 1562499ec78SHong Zhang 1572499ec78SHong Zhang seq = &mult->B_seq; 1582499ec78SHong Zhang ierr = MatGetSubMatrices(B,1,&mult->isrowb,&mult->iscolb,MAT_REUSE_MATRIX,&seq);CHKERRQ(ierr); 1592499ec78SHong Zhang mult->B_seq = *seq; 1602499ec78SHong Zhang 1612499ec78SHong Zhang seq = &mult->A_loc; 1622499ec78SHong Zhang ierr = MatGetSubMatrices(A,1,&mult->isrowa,&mult->isrowb,MAT_REUSE_MATRIX,&seq);CHKERRQ(ierr); 1632499ec78SHong Zhang mult->A_loc = *seq; 1642499ec78SHong Zhang 1652499ec78SHong Zhang ierr = MatMatMult_SeqAIJ_SeqAIJ(mult->A_loc,mult->B_seq,MAT_REUSE_MATRIX,0.0,&mult->C_seq);CHKERRQ(ierr); 1662499ec78SHong Zhang 1672499ec78SHong Zhang ierr = PetscObjectReference((PetscObject)mult->C_seq);CHKERRQ(ierr); 168899cda47SBarry Smith ierr = MatMerge(A->comm,mult->C_seq,B->cmap.n,MAT_REUSE_MATRIX,&C);CHKERRQ(ierr); 1692499ec78SHong Zhang PetscFunctionReturn(0); 1702499ec78SHong Zhang } 171*9123193aSHong Zhang 172*9123193aSHong Zhang #undef __FUNCT__ 173*9123193aSHong Zhang #define __FUNCT__ "MatMatMult_MPIAIJ_MPIDense" 174*9123193aSHong Zhang PetscErrorCode MatMatMult_MPIAIJ_MPIDense(Mat A,Mat B,MatReuse scall,PetscReal fill,Mat *C) 175*9123193aSHong Zhang { 176*9123193aSHong Zhang PetscErrorCode ierr; 177*9123193aSHong Zhang 178*9123193aSHong Zhang PetscFunctionBegin; 179*9123193aSHong Zhang if (scall == MAT_INITIAL_MATRIX){ 180*9123193aSHong Zhang ierr = MatMatMultSymbolic_MPIAIJ_MPIDense(A,B,fill,C);CHKERRQ(ierr); 181*9123193aSHong Zhang } 182*9123193aSHong Zhang ierr = MatMatMultNumeric_MPIAIJ_MPIDense(A,B,*C);CHKERRQ(ierr); 183*9123193aSHong Zhang PetscFunctionReturn(0); 184*9123193aSHong Zhang } 185*9123193aSHong Zhang 186*9123193aSHong Zhang 187*9123193aSHong Zhang #undef __FUNCT__ 188*9123193aSHong Zhang #define __FUNCT__ "MatMatMultSymbolic_MPIDense_MPIDense" 189*9123193aSHong Zhang PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat *C) 190*9123193aSHong Zhang { 191*9123193aSHong Zhang PetscErrorCode ierr; 192*9123193aSHong Zhang PetscInt m=A->rmap.n,n=B->cmap.n; 193*9123193aSHong Zhang Mat Cmat; 194*9123193aSHong Zhang 195*9123193aSHong Zhang PetscFunctionBegin; 196*9123193aSHong Zhang if (A->cmap.n != B->rmap.n) SETERRQ2(PETSC_ERR_ARG_SIZ,"A->cmap.n %d != B->rmap.n %d\n",A->cmap.n,B->rmap.n); 197*9123193aSHong Zhang ierr = MatCreate(B->comm,&Cmat);CHKERRQ(ierr); 198*9123193aSHong Zhang ierr = MatSetSizes(Cmat,m,n,A->rmap.N,B->cmap.N);CHKERRQ(ierr); 199*9123193aSHong Zhang ierr = MatSetType(Cmat,MATMPIDENSE);CHKERRQ(ierr); 200*9123193aSHong Zhang ierr = MatMPIDenseSetPreallocation(Cmat,PETSC_NULL);CHKERRQ(ierr); 201*9123193aSHong Zhang Cmat->assembled = PETSC_TRUE; 202*9123193aSHong Zhang *C = Cmat; 203*9123193aSHong Zhang PetscFunctionReturn(0); 204*9123193aSHong Zhang } 205*9123193aSHong Zhang 206*9123193aSHong Zhang #undef __FUNCT__ 207*9123193aSHong Zhang #define __FUNCT__ "MatMatMultSymbolic_MPIAIJ_MPIDense" 208*9123193aSHong Zhang PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIDense(Mat A,Mat B,PetscReal fill,Mat *C) 209*9123193aSHong Zhang { 210*9123193aSHong Zhang PetscErrorCode ierr; 211*9123193aSHong Zhang 212*9123193aSHong Zhang PetscFunctionBegin; 213*9123193aSHong Zhang ierr = MatMatMultSymbolic_MPIDense_MPIDense(A,B,0.0,C); 214*9123193aSHong Zhang PetscFunctionReturn(0); 215*9123193aSHong Zhang } 216*9123193aSHong Zhang 217*9123193aSHong Zhang #undef __FUNCT__ 218*9123193aSHong Zhang #define __FUNCT__ "MatMatMultNumeric_MPIAIJ_MPIDense" 219*9123193aSHong Zhang PetscErrorCode MatMatMultNumeric_MPIAIJ_MPIDense(Mat A,Mat B,Mat C) 220*9123193aSHong Zhang { 221*9123193aSHong Zhang PetscErrorCode ierr; 222*9123193aSHong Zhang PetscScalar *b,*c,*barray,*carray; 223*9123193aSHong Zhang PetscInt cm=C->rmap.n, bN=B->cmap.N, bm=B->rmap.n, col; 224*9123193aSHong Zhang Vec vb,vc; 225*9123193aSHong Zhang 226*9123193aSHong Zhang PetscFunctionBegin; 227*9123193aSHong Zhang //PetscMPIInt rank; 228*9123193aSHong Zhang //ierr = MPI_Comm_rank(A->comm,&rank);CHKERRQ(ierr); 229*9123193aSHong Zhang if (!C->rmap.N || !bN) PetscFunctionReturn(0); 230*9123193aSHong Zhang ierr = VecCreateMPI(B->comm,bm,PETSC_DECIDE,&vb);CHKERRQ(ierr); 231*9123193aSHong Zhang ierr = VecCreateMPI(A->comm,cm,PETSC_DECIDE,&vc);CHKERRQ(ierr); 232*9123193aSHong Zhang 233*9123193aSHong Zhang ierr = MatGetArray(B,&barray);CHKERRQ(ierr); 234*9123193aSHong Zhang ierr = MatGetArray(C,&carray);CHKERRQ(ierr); 235*9123193aSHong Zhang b = barray; c = carray; 236*9123193aSHong Zhang for (col=0; col<bN; col++){ 237*9123193aSHong Zhang ierr = VecPlaceArray(vb,b);CHKERRQ(ierr); 238*9123193aSHong Zhang ierr = VecPlaceArray(vc,c);CHKERRQ(ierr); 239*9123193aSHong Zhang //if (!rank) printf(" col %d, vb:\n",col); 240*9123193aSHong Zhang //ierr = VecView(vb,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 241*9123193aSHong Zhang ierr = MatMult(A,vb,vc);CHKERRQ(ierr); 242*9123193aSHong Zhang //if (!rank) printf(" col %d, vc:\n",col); 243*9123193aSHong Zhang //ierr = VecView(vc,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 244*9123193aSHong Zhang b += bm; c += cm; 245*9123193aSHong Zhang ierr = VecResetArray(vb);CHKERRQ(ierr); 246*9123193aSHong Zhang ierr = VecResetArray(vc);CHKERRQ(ierr); 247*9123193aSHong Zhang } 248*9123193aSHong Zhang ierr = MatRestoreArray(B,&barray);CHKERRQ(ierr); 249*9123193aSHong Zhang ierr = MatRestoreArray(C,&carray);CHKERRQ(ierr); 250*9123193aSHong Zhang ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 251*9123193aSHong Zhang ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 252*9123193aSHong Zhang ierr = VecDestroy(vb);CHKERRQ(ierr); 253*9123193aSHong Zhang ierr = VecDestroy(vc);CHKERRQ(ierr); 254*9123193aSHong Zhang PetscFunctionReturn(0); 255*9123193aSHong Zhang } 256*9123193aSHong Zhang 257