1be1d678aSKris Buschelman 22499ec78SHong Zhang /* 32499ec78SHong Zhang Defines matrix-matrix product routines for pairs of MPIAIJ matrices 42499ec78SHong Zhang C = A * B 52499ec78SHong Zhang */ 6c6db04a5SJed Brown #include <../src/mat/impls/aij/seq/aij.h> /*I "petscmat.h" I*/ 7c6db04a5SJed Brown #include <../src/mat/utils/freespace.h> 8c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> 9c6db04a5SJed Brown #include <petscbt.h> 10c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h> 116291f5a6SHong Zhang /* 126291f5a6SHong Zhang #define DEBUG_MATMATMULT 136291f5a6SHong Zhang */ 141634b032SHong Zhang 152499ec78SHong Zhang #undef __FUNCT__ 162499ec78SHong Zhang #define __FUNCT__ "MatMatMult_MPIAIJ_MPIAIJ" 172499ec78SHong Zhang PetscErrorCode MatMatMult_MPIAIJ_MPIAIJ(Mat A,Mat B,MatReuse scall,PetscReal fill, Mat *C) 182499ec78SHong Zhang { 192499ec78SHong Zhang PetscErrorCode ierr; 202499ec78SHong Zhang 212499ec78SHong Zhang PetscFunctionBegin; 222499ec78SHong Zhang if (scall == MAT_INITIAL_MATRIX){ 23598bc09dSHong Zhang ierr = PetscLogEventBegin(MAT_MatMultSymbolic,A,B,0,0);CHKERRQ(ierr); 24a1a4e84aSHong Zhang ierr = MatMatMultSymbolic_MPIAIJ_MPIAIJ(A,B,fill,C);CHKERRQ(ierr); 25598bc09dSHong Zhang ierr = PetscLogEventEnd(MAT_MatMultSymbolic,A,B,0,0);CHKERRQ(ierr); 262499ec78SHong Zhang } 27598bc09dSHong Zhang ierr = PetscLogEventBegin(MAT_MatMultNumeric,A,B,0,0);CHKERRQ(ierr); 28598bc09dSHong Zhang ierr = (*(*C)->ops->matmultnumeric)(A,B,*C);CHKERRQ(ierr); 29598bc09dSHong Zhang ierr = PetscLogEventEnd(MAT_MatMultNumeric,A,B,0,0);CHKERRQ(ierr); 302499ec78SHong Zhang PetscFunctionReturn(0); 312499ec78SHong Zhang } 322499ec78SHong Zhang 33f33d1a9aSHong Zhang #undef __FUNCT__ 34776b82aeSLisandro Dalcin #define __FUNCT__ "PetscContainerDestroy_Mat_MatMatMultMPI" 35776b82aeSLisandro Dalcin PetscErrorCode PetscContainerDestroy_Mat_MatMatMultMPI(void *ptr) 36f33d1a9aSHong Zhang { 37f33d1a9aSHong Zhang PetscErrorCode ierr; 389649163dSHong Zhang Mat_MatMatMultMPI *mult=(Mat_MatMatMultMPI*)ptr; 39f33d1a9aSHong Zhang 40f33d1a9aSHong Zhang PetscFunctionBegin; 416bf464f9SBarry Smith ierr = ISDestroy(&mult->isrowa);CHKERRQ(ierr); 426bf464f9SBarry Smith ierr = ISDestroy(&mult->isrowb);CHKERRQ(ierr); 436bf464f9SBarry Smith ierr = ISDestroy(&mult->iscolb);CHKERRQ(ierr); 446bf464f9SBarry Smith ierr = MatDestroy(&mult->C_seq);CHKERRQ(ierr); 456bf464f9SBarry Smith ierr = MatDestroy(&mult->A_loc);CHKERRQ(ierr); 466bf464f9SBarry Smith ierr = MatDestroy(&mult->B_seq);CHKERRQ(ierr); 47f33d1a9aSHong Zhang ierr = PetscFree(mult);CHKERRQ(ierr); 48f33d1a9aSHong Zhang PetscFunctionReturn(0); 49f33d1a9aSHong Zhang } 50f33d1a9aSHong Zhang 51598bc09dSHong Zhang #undef __FUNCT__ 52a1a4e84aSHong Zhang #define __FUNCT__ "MatDestroy_MPIAIJ_MatMatMult" 53a1a4e84aSHong Zhang PetscErrorCode MatDestroy_MPIAIJ_MatMatMult(Mat A) 54598bc09dSHong Zhang { 55598bc09dSHong Zhang PetscErrorCode ierr; 56598bc09dSHong Zhang Mat_MPIAIJ *a=(Mat_MPIAIJ*)A->data; 57598bc09dSHong Zhang Mat_PtAPMPI *ptap=a->ptap; 58598bc09dSHong Zhang 59598bc09dSHong Zhang PetscFunctionBegin; 60598bc09dSHong Zhang ierr = PetscFree2(ptap->startsj,ptap->startsj_r);CHKERRQ(ierr); 61598bc09dSHong Zhang ierr = PetscFree(ptap->bufa);CHKERRQ(ierr); 62a1a4e84aSHong Zhang ierr = MatDestroy(&ptap->P_loc);CHKERRQ(ierr); 63a1a4e84aSHong Zhang ierr = MatDestroy(&ptap->P_oth);CHKERRQ(ierr); 64a1a4e84aSHong Zhang ierr = PetscFree(ptap->api);CHKERRQ(ierr); 65a1a4e84aSHong Zhang ierr = PetscFree(ptap->apj);CHKERRQ(ierr); 66598bc09dSHong Zhang ierr = PetscFree(ptap->apa);CHKERRQ(ierr); 67598bc09dSHong Zhang ierr = ptap->destroy(A);CHKERRQ(ierr); 68598bc09dSHong Zhang ierr = PetscFree(ptap);CHKERRQ(ierr); 69598bc09dSHong Zhang PetscFunctionReturn(0); 70598bc09dSHong Zhang } 71598bc09dSHong Zhang 722499ec78SHong Zhang #undef __FUNCT__ 73a1a4e84aSHong Zhang #define __FUNCT__ "MatDestroy_MPIAIJ_MatMatMult_32" 74a1a4e84aSHong Zhang PetscErrorCode MatDestroy_MPIAIJ_MatMatMult_32(Mat A) 752499ec78SHong Zhang { 762499ec78SHong Zhang PetscErrorCode ierr; 77776b82aeSLisandro Dalcin PetscContainer container; 789649163dSHong Zhang Mat_MatMatMultMPI *mult=PETSC_NULL; 792499ec78SHong Zhang 802499ec78SHong Zhang PetscFunctionBegin; 819649163dSHong Zhang ierr = PetscObjectQuery((PetscObject)A,"Mat_MatMatMultMPI",(PetscObject *)&container);CHKERRQ(ierr); 82bf0cc555SLisandro Dalcin if (!container) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Container does not exit"); 83776b82aeSLisandro Dalcin ierr = PetscContainerGetPointer(container,(void **)&mult);CHKERRQ(ierr); 84dce485f0SBarry Smith A->ops->destroy = mult->destroy; 85bf0cc555SLisandro Dalcin A->ops->duplicate = mult->duplicate; 86bf0cc555SLisandro Dalcin if (A->ops->destroy) { 87992edd73SBarry Smith ierr = (*A->ops->destroy)(A);CHKERRQ(ierr); 88bf0cc555SLisandro Dalcin } 89bf0cc555SLisandro Dalcin ierr = PetscObjectCompose((PetscObject)A,"Mat_MatMatMultMPI",0);CHKERRQ(ierr); 902499ec78SHong Zhang PetscFunctionReturn(0); 912499ec78SHong Zhang } 922499ec78SHong Zhang 932499ec78SHong Zhang #undef __FUNCT__ 94a1a4e84aSHong Zhang #define __FUNCT__ "MatDuplicate_MPIAIJ_MatMatMult_32" 95a1a4e84aSHong Zhang PetscErrorCode MatDuplicate_MPIAIJ_MatMatMult_32(Mat A, MatDuplicateOption op, Mat *M) 96b9c92825SBarry Smith { 97abf897f8SHong Zhang PetscErrorCode ierr; 98abf897f8SHong Zhang Mat_MatMatMultMPI *mult; 99776b82aeSLisandro Dalcin PetscContainer container; 100abf897f8SHong Zhang 101abf897f8SHong Zhang PetscFunctionBegin; 102abf897f8SHong Zhang ierr = PetscObjectQuery((PetscObject)A,"Mat_MatMatMultMPI",(PetscObject *)&container);CHKERRQ(ierr); 103bf0cc555SLisandro Dalcin if (!container) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Container does not exit"); 104776b82aeSLisandro Dalcin ierr = PetscContainerGetPointer(container,(void **)&mult);CHKERRQ(ierr); 1055c088420SHong Zhang /* Note: the container is not duplicated, because it requires deep copying of 1065c088420SHong Zhang several large data sets (see PetscContainerDestroy_Mat_MatMatMultMPI()). 1075c088420SHong Zhang These data sets are only used for repeated calling of MatMatMultNumeric(). 1085c088420SHong Zhang *M is unlikely being used in this way. Thus we create *M with pure mpiaij format */ 109dce485f0SBarry Smith ierr = (*mult->duplicate)(A,op,M);CHKERRQ(ierr); 110dce485f0SBarry Smith (*M)->ops->destroy = mult->destroy; /* = MatDestroy_MPIAIJ, *M doesn't duplicate A's container! */ 111dce485f0SBarry Smith (*M)->ops->duplicate = mult->duplicate; /* = MatDuplicate_MPIAIJ */ 112abf897f8SHong Zhang PetscFunctionReturn(0); 113abf897f8SHong Zhang } 114abf897f8SHong Zhang 115abf897f8SHong Zhang #undef __FUNCT__ 116a1a4e84aSHong Zhang #define __FUNCT__ "MatDuplicate_MPIAIJ_MatMatMult" 117a1a4e84aSHong Zhang PetscErrorCode MatDuplicate_MPIAIJ_MatMatMult(Mat A, MatDuplicateOption op, Mat *M) 1184ae0847bSHong Zhang { 1194ae0847bSHong Zhang PetscErrorCode ierr; 1204ae0847bSHong Zhang Mat_MPIAIJ *a=(Mat_MPIAIJ*)A->data; 1214ae0847bSHong Zhang Mat_PtAPMPI *ptap=a->ptap; 1224ae0847bSHong Zhang 1234ae0847bSHong Zhang PetscFunctionBegin; 1244ae0847bSHong Zhang ierr = (*ptap->duplicate)(A,op,M);CHKERRQ(ierr); 1254ae0847bSHong Zhang (*M)->ops->destroy = ptap->destroy; /* = MatDestroy_MPIAIJ, *M doesn't duplicate A's special structure! */ 1264ae0847bSHong Zhang (*M)->ops->duplicate = ptap->duplicate; /* = MatDuplicate_MPIAIJ */ 1274ae0847bSHong Zhang PetscFunctionReturn(0); 1284ae0847bSHong Zhang } 1294ae0847bSHong Zhang 1304ae0847bSHong Zhang #undef __FUNCT__ 131a1a4e84aSHong Zhang #define __FUNCT__ "MatMatMultNumeric_MPIAIJ_MPIAIJ" 132a1a4e84aSHong Zhang PetscErrorCode MatMatMultNumeric_MPIAIJ_MPIAIJ(Mat A,Mat P,Mat C) 133598bc09dSHong Zhang { 134598bc09dSHong Zhang PetscErrorCode ierr; 1354ae0847bSHong Zhang Mat_MPIAIJ *a=(Mat_MPIAIJ*)A->data,*c=(Mat_MPIAIJ*)C->data; 136598bc09dSHong Zhang Mat_SeqAIJ *ad=(Mat_SeqAIJ*)(a->A)->data,*ao=(Mat_SeqAIJ*)(a->B)->data; 137598bc09dSHong Zhang Mat_SeqAIJ *cd=(Mat_SeqAIJ*)(c->A)->data,*co=(Mat_SeqAIJ*)(c->B)->data; 138598bc09dSHong Zhang PetscInt *adi=ad->i,*adj,*aoi=ao->i,*aoj; 139598bc09dSHong Zhang PetscScalar *ada,*aoa,*cda=cd->a,*coa=co->a; 140598bc09dSHong Zhang Mat_SeqAIJ *p_loc,*p_oth; 141598bc09dSHong Zhang PetscInt *pi_loc,*pj_loc,*pi_oth,*pj_oth,*pj; 142598bc09dSHong Zhang PetscScalar *pa_loc,*pa_oth,*pa,*apa,valtmp,*ca; 143598bc09dSHong Zhang PetscInt cm=C->rmap->n,anz,pnz; 144598bc09dSHong Zhang Mat_PtAPMPI *ptap=c->ptap; 14565a57a32SSean Farley PetscInt *api,*apj,*apJ,i,j,k,row; 1464ae0847bSHong Zhang PetscInt rstart=C->rmap->rstart,cstart=C->cmap->rstart; 147598bc09dSHong Zhang PetscInt cdnz,conz,k0,k1; 1487c2e2f26SHong Zhang #if defined(DEBUG_MATMATMULT) 1497c2e2f26SHong Zhang PetscMPIInt rank=a->rank; 1507c2e2f26SHong Zhang #endif 151598bc09dSHong Zhang 152598bc09dSHong Zhang PetscFunctionBegin; 1537c2e2f26SHong Zhang #if defined(DEBUG_MATMATMULT) 1547c2e2f26SHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] call MatMatMultNumeric_MPIAIJ_MPIAIJ()...\n",rank); 1557c2e2f26SHong Zhang #endif 1567c2e2f26SHong Zhang 157a1a4e84aSHong Zhang /* 1) get P_oth = ptap->P_oth and P_loc = ptap->P_loc */ 158598bc09dSHong Zhang /*-----------------------------------------------------*/ 159a1a4e84aSHong Zhang /* update numerical values of P_oth and P_loc */ 160a1a4e84aSHong Zhang ierr = MatGetBrowsOfAoCols_MPIAIJ(A,P,MAT_REUSE_MATRIX,&ptap->startsj,&ptap->startsj_r,&ptap->bufa,&ptap->P_oth);CHKERRQ(ierr); 161a1a4e84aSHong Zhang ierr = MatMPIAIJGetLocalMat(P,MAT_REUSE_MATRIX,&ptap->P_loc);CHKERRQ(ierr); 1626291f5a6SHong Zhang #if defined(DEBUG_MATMATMULT) 1636291f5a6SHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] got P_oth and P_loc...\n",rank); 1646291f5a6SHong Zhang #endif 165598bc09dSHong Zhang 166598bc09dSHong Zhang /* 2) compute numeric C_loc = A_loc*P = Ad*P_loc + Ao*P_oth */ 167598bc09dSHong Zhang /*----------------------------------------------------------*/ 168598bc09dSHong Zhang /* get data from symbolic products */ 169a1a4e84aSHong Zhang p_loc = (Mat_SeqAIJ*)(ptap->P_loc)->data; 170a1a4e84aSHong Zhang p_oth = (Mat_SeqAIJ*)(ptap->P_oth)->data; 171598bc09dSHong Zhang pi_loc=p_loc->i; pj_loc=p_loc->j; pa_loc=p_loc->a; 172598bc09dSHong Zhang pi_oth=p_oth->i; pj_oth=p_oth->j; pa_oth=p_oth->a; 173598bc09dSHong Zhang 174598bc09dSHong Zhang /* get apa for storing dense row A[i,:]*P */ 175598bc09dSHong Zhang apa = ptap->apa; 176598bc09dSHong Zhang 177598bc09dSHong Zhang for (i=0; i<cm; i++) { 178598bc09dSHong Zhang /* diagonal portion of A */ 179598bc09dSHong Zhang anz = adi[i+1] - adi[i]; 180598bc09dSHong Zhang adj = ad->j + adi[i]; 181598bc09dSHong Zhang ada = ad->a + adi[i]; 182598bc09dSHong Zhang for (j=0; j<anz; j++) { 183598bc09dSHong Zhang row = adj[j]; 184598bc09dSHong Zhang pnz = pi_loc[row+1] - pi_loc[row]; 185598bc09dSHong Zhang pj = pj_loc + pi_loc[row]; 186598bc09dSHong Zhang pa = pa_loc + pi_loc[row]; 187598bc09dSHong Zhang 188598bc09dSHong Zhang /* perform dense axpy */ 189598bc09dSHong Zhang valtmp = ada[j]; 190598bc09dSHong Zhang for (k=0; k<pnz; k++){ 191598bc09dSHong Zhang apa[pj[k]] += valtmp*pa[k]; 192598bc09dSHong Zhang } 193598bc09dSHong Zhang ierr = PetscLogFlops(2.0*pnz);CHKERRQ(ierr); 194598bc09dSHong Zhang } 195598bc09dSHong Zhang 196598bc09dSHong Zhang /* off-diagonal portion of A */ 197598bc09dSHong Zhang anz = aoi[i+1] - aoi[i]; 198598bc09dSHong Zhang aoj = ao->j + aoi[i]; 199598bc09dSHong Zhang aoa = ao->a + aoi[i]; 200598bc09dSHong Zhang for (j=0; j<anz; j++) { 201598bc09dSHong Zhang row = aoj[j]; 202598bc09dSHong Zhang pnz = pi_oth[row+1] - pi_oth[row]; 203598bc09dSHong Zhang pj = pj_oth + pi_oth[row]; 204598bc09dSHong Zhang pa = pa_oth + pi_oth[row]; 205598bc09dSHong Zhang 206598bc09dSHong Zhang /* perform dense axpy */ 207598bc09dSHong Zhang valtmp = aoa[j]; 208598bc09dSHong Zhang for (k=0; k<pnz; k++){ 209598bc09dSHong Zhang apa[pj[k]] += valtmp*pa[k]; 210598bc09dSHong Zhang } 211598bc09dSHong Zhang ierr = PetscLogFlops(2.0*pnz);CHKERRQ(ierr); 212598bc09dSHong Zhang } 213598bc09dSHong Zhang 214598bc09dSHong Zhang /* set values in C */ 215598bc09dSHong Zhang row = rstart + i; 216a1a4e84aSHong Zhang api = ptap->api; 217a1a4e84aSHong Zhang apj = ptap->apj; 218598bc09dSHong Zhang apJ = apj + api[i]; 219598bc09dSHong Zhang cdnz = cd->i[i+1] - cd->i[i]; 220598bc09dSHong Zhang conz = co->i[i+1] - co->i[i]; 221598bc09dSHong Zhang 222598bc09dSHong Zhang /* 1st off-diagoanl part of C */ 223598bc09dSHong Zhang ca = coa + co->i[i]; 224598bc09dSHong Zhang k = 0; 225598bc09dSHong Zhang for (k0=0; k0<conz; k0++){ 226598bc09dSHong Zhang if (apJ[k] >= cstart) break; 227598bc09dSHong Zhang ca[k0] = apa[apJ[k]]; 228598bc09dSHong Zhang apa[apJ[k]] = 0.0; 229598bc09dSHong Zhang k++; 230598bc09dSHong Zhang } 231598bc09dSHong Zhang 232598bc09dSHong Zhang /* diagonal part of C */ 233598bc09dSHong Zhang ca = cda + cd->i[i]; 234598bc09dSHong Zhang for (k1=0; k1<cdnz; k1++){ 235598bc09dSHong Zhang ca[k1] = apa[apJ[k]]; 236598bc09dSHong Zhang apa[apJ[k]] = 0.0; 237598bc09dSHong Zhang k++; 238598bc09dSHong Zhang } 239598bc09dSHong Zhang 240598bc09dSHong Zhang /* 2nd off-diagoanl part of C */ 241598bc09dSHong Zhang ca = coa + co->i[i]; 242598bc09dSHong Zhang for (; k0<conz; k0++){ 243598bc09dSHong Zhang ca[k0] = apa[apJ[k]]; 244598bc09dSHong Zhang apa[apJ[k]] = 0.0; 245598bc09dSHong Zhang k++; 246598bc09dSHong Zhang } 247598bc09dSHong Zhang } 248598bc09dSHong Zhang ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 249598bc09dSHong Zhang ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 2506291f5a6SHong Zhang #if defined(DEBUG_MATMATMULT) 2516291f5a6SHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] exit MatMatMultNumeric_MPIAIJ_MPIAIJ()...\n",rank); 2526291f5a6SHong Zhang #endif 253598bc09dSHong Zhang PetscFunctionReturn(0); 254598bc09dSHong Zhang } 255598bc09dSHong Zhang 256598bc09dSHong Zhang #undef __FUNCT__ 257a1a4e84aSHong Zhang #define __FUNCT__ "MatMatMultSymbolic_MPIAIJ_MPIAIJ" 258a1a4e84aSHong Zhang PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ(Mat A,Mat P,PetscReal fill,Mat *C) 259598bc09dSHong Zhang { 260598bc09dSHong Zhang PetscErrorCode ierr; 261598bc09dSHong Zhang MPI_Comm comm=((PetscObject)A)->comm; 262bfcd1a73SHong Zhang Mat Cmpi; 263598bc09dSHong Zhang Mat_PtAPMPI *ptap; 264598bc09dSHong Zhang PetscFreeSpaceList free_space=PETSC_NULL,current_space=PETSC_NULL; 2654ae0847bSHong Zhang Mat_MPIAIJ *a=(Mat_MPIAIJ*)A->data,*c; 266bfcd1a73SHong Zhang Mat_SeqAIJ *ad=(Mat_SeqAIJ*)(a->A)->data,*ao=(Mat_SeqAIJ*)(a->B)->data,*p_loc,*p_oth; 2674ae0847bSHong Zhang PetscInt *pi_loc,*pj_loc,*pi_oth,*pj_oth,*dnz,*onz; 2684ae0847bSHong Zhang PetscInt *adi=ad->i,*adj=ad->j,*aoi=ao->i,*aoj=ao->j,rstart=A->rmap->rstart; 269bfcd1a73SHong Zhang PetscInt nlnk,*lnk,i,pnz,row,*api,*apj,*Jptr,apnz,nspacedouble=0,j,nzi; 270bfcd1a73SHong Zhang PetscInt am=A->rmap->n,pN=P->cmap->N,pn=P->cmap->n,pm=P->rmap->n; 271598bc09dSHong Zhang PetscBT lnkbt; 272598bc09dSHong Zhang PetscScalar *apa; 273bfcd1a73SHong Zhang PetscReal afill; 274a1a4e84aSHong Zhang PetscBool matmatmult_old=PETSC_FALSE; 2757c2e2f26SHong Zhang #if defined(DEBUG_MATMATMULT) 2767c2e2f26SHong Zhang PetscMPIInt rank=a->rank; 2777c2e2f26SHong Zhang #endif 278598bc09dSHong Zhang 279598bc09dSHong Zhang PetscFunctionBegin; 280a1a4e84aSHong Zhang if (A->cmap->rstart != P->rmap->rstart || A->cmap->rend != P->rmap->rend){ 281a1a4e84aSHong Zhang SETERRQ4(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, (%D, %D) != (%D,%D)",A->cmap->rstart,A->cmap->rend,P->rmap->rstart,P->rmap->rend); 282a1a4e84aSHong Zhang } 283a1a4e84aSHong Zhang ierr = PetscOptionsGetBool(PETSC_NULL,"-matmatmult_old",&matmatmult_old,PETSC_NULL);CHKERRQ(ierr); 284a1a4e84aSHong Zhang if (matmatmult_old){ 285a1a4e84aSHong Zhang ierr = MatMatMultSymbolic_MPIAIJ_MPIAIJ_32(A,P,fill,C);;CHKERRQ(ierr); 286a1a4e84aSHong Zhang PetscFunctionReturn(0); 287a1a4e84aSHong Zhang } 2881634b032SHong Zhang ierr = PetscOptionsGetBool(PETSC_NULL,"-matmatmult-dev_old",&matmatmult_old,PETSC_NULL);CHKERRQ(ierr); 2891634b032SHong Zhang if (matmatmult_old){ 2901634b032SHong Zhang ierr = MatMatMultSymbolic_MPIAIJ_MPIAIJ_32_dev(A,P,fill,C);;CHKERRQ(ierr); 2911634b032SHong Zhang PetscFunctionReturn(0); 2921634b032SHong Zhang } 293a1a4e84aSHong Zhang 2947c2e2f26SHong Zhang #if defined(DEBUG_MATMATMULT) 2957c2e2f26SHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] call MatMatMultSymbolic_MPIAIJ_MPIAIJ()...\n",rank); 2967c2e2f26SHong Zhang #endif 2977c2e2f26SHong Zhang 298598bc09dSHong Zhang /* create struct Mat_PtAPMPI and attached it to C later */ 299598bc09dSHong Zhang ierr = PetscNew(Mat_PtAPMPI,&ptap);CHKERRQ(ierr); 300598bc09dSHong Zhang 301598bc09dSHong Zhang /* malloc apa to store dense row A[i,:]*P */ 302bfcd1a73SHong Zhang ierr = PetscMalloc(pN*sizeof(PetscScalar),&apa);CHKERRQ(ierr); 303bfcd1a73SHong Zhang ierr = PetscMemzero(apa,pN*sizeof(PetscScalar));CHKERRQ(ierr); 304598bc09dSHong Zhang ptap->apa = apa; 3056291f5a6SHong Zhang #if defined(DEBUG_MATMATMULT) 306e9e4536cSHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] Malloc apa pN %D is done...\n",rank,pN); 307e9e4536cSHong Zhang //if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] Annz %D\n",rank,ad->i[am]+ao->i[am]); 3086291f5a6SHong Zhang #endif 309598bc09dSHong Zhang 310598bc09dSHong Zhang /* get P_oth by taking rows of P (= non-zero cols of local A) from other processors */ 311a1a4e84aSHong Zhang ierr = MatGetBrowsOfAoCols_MPIAIJ(A,P,MAT_INITIAL_MATRIX,&ptap->startsj,&ptap->startsj_r,&ptap->bufa,&ptap->P_oth);CHKERRQ(ierr); 3126291f5a6SHong Zhang #if defined(DEBUG_MATMATMULT) 3136291f5a6SHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] P_oth is done...\n",rank); 3146291f5a6SHong Zhang #endif 315598bc09dSHong Zhang /* get P_loc by taking all local rows of P */ 316a1a4e84aSHong Zhang ierr = MatMPIAIJGetLocalMat(P,MAT_INITIAL_MATRIX,&ptap->P_loc);CHKERRQ(ierr); 317598bc09dSHong Zhang 318a1a4e84aSHong Zhang p_loc = (Mat_SeqAIJ*)(ptap->P_loc)->data; 319a1a4e84aSHong Zhang p_oth = (Mat_SeqAIJ*)(ptap->P_oth)->data; 320598bc09dSHong Zhang pi_loc = p_loc->i; pj_loc = p_loc->j; 321598bc09dSHong Zhang pi_oth = p_oth->i; pj_oth = p_oth->j; 322598bc09dSHong Zhang 3236291f5a6SHong Zhang #if defined(DEBUG_MATMATMULT) 324e9e4536cSHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] P_loc is done, Annz %D * P_locnnz %D = %D...\n",rank,ad->i[am]+ao->i[am],p_loc->rmax,(ad->i[am]+ao->i[am])*p_loc->rmax); 3256291f5a6SHong Zhang #endif 3266291f5a6SHong Zhang 327598bc09dSHong Zhang /* first, compute symbolic AP = A_loc*P = A_diag*P_loc + A_off*P_oth */ 328598bc09dSHong Zhang /*-------------------------------------------------------------------*/ 329598bc09dSHong Zhang ierr = PetscMalloc((am+2)*sizeof(PetscInt),&api);CHKERRQ(ierr); 330a1a4e84aSHong Zhang ptap->api = api; 331598bc09dSHong Zhang api[0] = 0; 332598bc09dSHong Zhang 333598bc09dSHong Zhang /* create and initialize a linked list */ 334598bc09dSHong Zhang nlnk = pN+1; 335598bc09dSHong Zhang ierr = PetscLLCreate(pN,pN,nlnk,lnk,lnkbt);CHKERRQ(ierr); 336598bc09dSHong Zhang 337bfcd1a73SHong Zhang /* Initial FreeSpace size is fill*(nnz(A)+nnz(P)) */ 338bfcd1a73SHong Zhang ierr = PetscFreeSpaceGet((PetscInt)(fill*(adi[am]+aoi[am]+pi_loc[pm])),&free_space);CHKERRQ(ierr); 339598bc09dSHong Zhang current_space = free_space; 340598bc09dSHong Zhang 341598bc09dSHong Zhang ierr = MatPreallocateInitialize(comm,am,pn,dnz,onz);CHKERRQ(ierr); 342598bc09dSHong Zhang for (i=0; i<am; i++) { 343598bc09dSHong Zhang apnz = 0; 344598bc09dSHong Zhang /* diagonal portion of A */ 345598bc09dSHong Zhang nzi = adi[i+1] - adi[i]; 346598bc09dSHong Zhang for (j=0; j<nzi; j++){ 347598bc09dSHong Zhang row = *adj++; 348598bc09dSHong Zhang pnz = pi_loc[row+1] - pi_loc[row]; 349598bc09dSHong Zhang Jptr = pj_loc + pi_loc[row]; 350598bc09dSHong Zhang /* add non-zero cols of P into the sorted linked list lnk */ 351dadf0e6bSHong Zhang ierr = PetscLLAddSorted(pnz,Jptr,pN,nlnk,lnk,lnkbt);CHKERRQ(ierr); 352598bc09dSHong Zhang apnz += nlnk; 353598bc09dSHong Zhang } 354598bc09dSHong Zhang /* off-diagonal portion of A */ 355598bc09dSHong Zhang nzi = aoi[i+1] - aoi[i]; 356598bc09dSHong Zhang for (j=0; j<nzi; j++){ 357598bc09dSHong Zhang row = *aoj++; 358598bc09dSHong Zhang pnz = pi_oth[row+1] - pi_oth[row]; 359598bc09dSHong Zhang Jptr = pj_oth + pi_oth[row]; 360dadf0e6bSHong Zhang ierr = PetscLLAddSorted(pnz,Jptr,pN,nlnk,lnk,lnkbt);CHKERRQ(ierr); 361598bc09dSHong Zhang apnz += nlnk; 362598bc09dSHong Zhang } 363598bc09dSHong Zhang 364598bc09dSHong Zhang api[i+1] = api[i] + apnz; 365598bc09dSHong Zhang 366598bc09dSHong Zhang /* if free space is not available, double the total space in the list */ 367598bc09dSHong Zhang if (current_space->local_remaining<apnz) { 368598bc09dSHong Zhang ierr = PetscFreeSpaceGet(apnz+current_space->total_array_size,¤t_space);CHKERRQ(ierr); 369598bc09dSHong Zhang nspacedouble++; 370598bc09dSHong Zhang } 371598bc09dSHong Zhang 372598bc09dSHong Zhang /* Copy data into free space, then initialize lnk */ 373598bc09dSHong Zhang ierr = PetscLLClean(pN,pN,apnz,lnk,current_space->array,lnkbt);CHKERRQ(ierr); 374598bc09dSHong Zhang ierr = MatPreallocateSet(i+rstart,apnz,current_space->array,dnz,onz);CHKERRQ(ierr); 375598bc09dSHong Zhang current_space->array += apnz; 376598bc09dSHong Zhang current_space->local_used += apnz; 377598bc09dSHong Zhang current_space->local_remaining -= apnz; 378598bc09dSHong Zhang } 379598bc09dSHong Zhang 380598bc09dSHong Zhang /* Allocate space for apj, initialize apj, and */ 381598bc09dSHong Zhang /* destroy list of free space and other temporary array(s) */ 382a1a4e84aSHong Zhang ierr = PetscMalloc((api[am]+1)*sizeof(PetscInt),&ptap->apj);CHKERRQ(ierr); 383a1a4e84aSHong Zhang apj = ptap->apj; 384a1a4e84aSHong Zhang ierr = PetscFreeSpaceContiguous(&free_space,ptap->apj);CHKERRQ(ierr); 385598bc09dSHong Zhang ierr = PetscLLDestroy(lnk,lnkbt);CHKERRQ(ierr); 3866291f5a6SHong Zhang #if defined(DEBUG_MATMATMULT) 3876291f5a6SHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] AP is done...\n",rank); 3886291f5a6SHong Zhang #endif 389598bc09dSHong Zhang 390bfcd1a73SHong Zhang /* create and assemble symbolic parallel matrix Cmpi */ 391598bc09dSHong Zhang /*----------------------------------------------------*/ 392bfcd1a73SHong Zhang ierr = MatCreate(comm,&Cmpi);CHKERRQ(ierr); 393bfcd1a73SHong Zhang ierr = MatSetSizes(Cmpi,am,pn,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr); 394bfcd1a73SHong Zhang ierr = MatSetType(Cmpi,MATMPIAIJ);CHKERRQ(ierr); 395bfcd1a73SHong Zhang ierr = MatMPIAIJSetPreallocation(Cmpi,0,dnz,0,onz);CHKERRQ(ierr); 396598bc09dSHong Zhang ierr = MatPreallocateFinalize(dnz,onz);CHKERRQ(ierr); 397bfcd1a73SHong Zhang ierr = MatSetBlockSize(Cmpi,1);CHKERRQ(ierr); 398598bc09dSHong Zhang for (i=0; i<am; i++){ 399598bc09dSHong Zhang row = i + rstart; 400598bc09dSHong Zhang apnz = api[i+1] - api[i]; 401bfcd1a73SHong Zhang ierr = MatSetValues(Cmpi,1,&row,apnz,apj,apa,INSERT_VALUES);CHKERRQ(ierr); 402598bc09dSHong Zhang apj += apnz; 403598bc09dSHong Zhang } 404bfcd1a73SHong Zhang ierr = MatAssemblyBegin(Cmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 405bfcd1a73SHong Zhang ierr = MatAssemblyEnd(Cmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 406598bc09dSHong Zhang 407bfcd1a73SHong Zhang ptap->destroy = Cmpi->ops->destroy; 408bfcd1a73SHong Zhang ptap->duplicate = Cmpi->ops->duplicate; 409bfcd1a73SHong Zhang Cmpi->ops->matmultnumeric = MatMatMultNumeric_MPIAIJ_MPIAIJ; 410bfcd1a73SHong Zhang Cmpi->ops->destroy = MatDestroy_MPIAIJ_MatMatMult; 411bfcd1a73SHong Zhang Cmpi->ops->duplicate = MatDuplicate_MPIAIJ_MatMatMult; 412598bc09dSHong Zhang 413bfcd1a73SHong Zhang /* attach the supporting struct to Cmpi for reuse */ 414bfcd1a73SHong Zhang c = (Mat_MPIAIJ*)Cmpi->data; 415598bc09dSHong Zhang c->ptap = ptap; 416598bc09dSHong Zhang 417bfcd1a73SHong Zhang *C = Cmpi; 418bfcd1a73SHong Zhang 419bfcd1a73SHong Zhang /* set MatInfo */ 420bfcd1a73SHong Zhang afill = (PetscReal)api[am]/(adi[am]+aoi[am]+pi_loc[pm]) + 1.e-5; 421bfcd1a73SHong Zhang if (afill < 1.0) afill = 1.0; 422bfcd1a73SHong Zhang Cmpi->info.mallocs = nspacedouble; 423bfcd1a73SHong Zhang Cmpi->info.fill_ratio_given = fill; 424bfcd1a73SHong Zhang Cmpi->info.fill_ratio_needed = afill; 425bfcd1a73SHong Zhang 426bfcd1a73SHong Zhang #if defined(PETSC_USE_INFO) 427bfcd1a73SHong Zhang if (api[am]) { 428bfcd1a73SHong Zhang ierr = PetscInfo3(Cmpi,"Reallocs %D; Fill ratio: given %G needed %G.\n",nspacedouble,fill,afill);CHKERRQ(ierr); 429bfcd1a73SHong Zhang ierr = PetscInfo1(Cmpi,"Use MatMatMult(A,B,MatReuse,%G,&C) for best performance.;\n",afill);CHKERRQ(ierr); 430bfcd1a73SHong Zhang } else { 431bfcd1a73SHong Zhang ierr = PetscInfo(Cmpi,"Empty matrix product\n");CHKERRQ(ierr); 432bfcd1a73SHong Zhang } 433bfcd1a73SHong Zhang #endif 4346291f5a6SHong Zhang #if defined(DEBUG_MATMATMULT) 4356291f5a6SHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] exit MatMatMultSymbolic_MPIAIJ_MPIAIJ()...\n",rank); 4366291f5a6SHong Zhang #endif 437598bc09dSHong Zhang PetscFunctionReturn(0); 438598bc09dSHong Zhang } 439598bc09dSHong Zhang 440a1a4e84aSHong Zhang /* implementation used in PETSc-3.2 */ 441a1a4e84aSHong Zhang /* This routine is called ONLY in the case of reusing previously computed symbolic C */ 442598bc09dSHong Zhang #undef __FUNCT__ 4431634b032SHong Zhang #define __FUNCT__ "MatMatMultNumeric_MPIAIJ_MPIAIJ_32_dev" 4441634b032SHong Zhang PetscErrorCode MatMatMultNumeric_MPIAIJ_MPIAIJ_32_dev(Mat A,Mat B,Mat C) 445a1a4e84aSHong Zhang { 446a1a4e84aSHong Zhang PetscErrorCode ierr; 447a1a4e84aSHong Zhang Mat *seq; 448a1a4e84aSHong Zhang Mat_MatMatMultMPI *mult; 449a1a4e84aSHong Zhang PetscContainer container; 450a1a4e84aSHong Zhang 451a1a4e84aSHong Zhang PetscFunctionBegin; 45215f4e0f4SHong Zhang ierr = PetscObjectQuery((PetscObject)C,"Mat_MatMatMultMPI",(PetscObject *)&container);CHKERRQ(ierr); 45315f4e0f4SHong Zhang if (!container) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Container does not exit"); 45415f4e0f4SHong Zhang ierr = PetscContainerGetPointer(container,(void **)&mult);CHKERRQ(ierr); 45515f4e0f4SHong Zhang 45615f4e0f4SHong Zhang if (mult->skipNumeric){ /* first numeric product is done during symbolic product */ 45715f4e0f4SHong Zhang mult->skipNumeric = PETSC_FALSE; 45815f4e0f4SHong Zhang PetscFunctionReturn(0); 45915f4e0f4SHong Zhang } 4607c2e2f26SHong Zhang #if defined(DEBUG_MATMATMULT) 4617c2e2f26SHong Zhang PetscMPIInt rank; 4627c2e2f26SHong Zhang ierr = MPI_Comm_rank(((PetscObject)C)->comm,&rank);CHKERRQ(ierr); 4631634b032SHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] call MatMatMultNumeric_MPIAIJ_MPIAIJ_32_dev()...\n",rank); 4647c2e2f26SHong Zhang #endif 46515f4e0f4SHong Zhang 466a1a4e84aSHong Zhang seq = &mult->B_seq; 467a1a4e84aSHong Zhang ierr = MatGetSubMatrices(B,1,&mult->isrowb,&mult->iscolb,MAT_REUSE_MATRIX,&seq);CHKERRQ(ierr); 468a1a4e84aSHong Zhang mult->B_seq = *seq; 469a1a4e84aSHong Zhang 470a1a4e84aSHong Zhang seq = &mult->A_loc; 471a1a4e84aSHong Zhang ierr = MatGetSubMatrices(A,1,&mult->isrowa,&mult->isrowb,MAT_REUSE_MATRIX,&seq);CHKERRQ(ierr); 472a1a4e84aSHong Zhang mult->A_loc = *seq; 473a1a4e84aSHong Zhang 474a1a4e84aSHong Zhang ierr = MatMatMultNumeric_SeqAIJ_SeqAIJ_SparseAxpy(mult->A_loc,mult->B_seq,mult->C_seq);CHKERRQ(ierr); 475a1a4e84aSHong Zhang 476a1a4e84aSHong Zhang ierr = PetscObjectReference((PetscObject)mult->C_seq);CHKERRQ(ierr); 477a1a4e84aSHong Zhang ierr = MatMerge(((PetscObject)A)->comm,mult->C_seq,B->cmap->n,MAT_REUSE_MATRIX,&C);CHKERRQ(ierr); 478a1a4e84aSHong Zhang PetscFunctionReturn(0); 479a1a4e84aSHong Zhang } 480a1a4e84aSHong Zhang 4817c2e2f26SHong Zhang /* numeric product is computed as well */ 482a1a4e84aSHong Zhang #undef __FUNCT__ 4831634b032SHong Zhang #define __FUNCT__ "MatMatMultSymbolic_MPIAIJ_MPIAIJ_32_dev" 4841634b032SHong Zhang PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ_32_dev(Mat A,Mat B,PetscReal fill,Mat *C) 4852499ec78SHong Zhang { 4862499ec78SHong Zhang PetscErrorCode ierr; 4872499ec78SHong Zhang Mat_MatMatMultMPI *mult; 488776b82aeSLisandro Dalcin PetscContainer container; 489d5821860SHong Zhang Mat AB,*seq; 490d5821860SHong Zhang Mat_MPIAIJ *a=(Mat_MPIAIJ*)A->data; 491d5821860SHong Zhang PetscInt *idx,i,start,ncols,nzA,nzB,*cmap,imark; 4927c2e2f26SHong Zhang #if defined(DEBUG_MATMATMULT) 493e9e4536cSHong Zhang MPI_Comm comm = ((PetscObject)A)->comm; 4947c2e2f26SHong Zhang PetscMPIInt rank=a->rank; 4957c2e2f26SHong Zhang #endif 4962499ec78SHong Zhang 4972499ec78SHong Zhang PetscFunctionBegin; 4987c2e2f26SHong Zhang #if defined(DEBUG_MATMATMULT) 4991634b032SHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] call MatMatMultSymbolic_MPIAIJ_MPIAIJ_32_dev()...\n",rank); 5007c2e2f26SHong Zhang #endif 501d0f46423SBarry Smith if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend){ 502e32f2f54SBarry Smith SETERRQ4(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, (%D, %D) != (%D,%D)",A->cmap->rstart,A->cmap->rend,B->rmap->rstart,B->rmap->rend); 5032499ec78SHong Zhang } 504598bc09dSHong Zhang 5052499ec78SHong Zhang ierr = PetscNew(Mat_MatMatMultMPI,&mult);CHKERRQ(ierr); 5062499ec78SHong Zhang 507d5821860SHong Zhang /* get isrowb: nonzero col of A */ 508d5821860SHong Zhang start = A->cmap->rstart; 509d5821860SHong Zhang cmap = a->garray; 510d5821860SHong Zhang nzA = a->A->cmap->n; 511d5821860SHong Zhang nzB = a->B->cmap->n; 512d5821860SHong Zhang ierr = PetscMalloc((nzA+nzB)*sizeof(PetscInt), &idx);CHKERRQ(ierr); 513d5821860SHong Zhang ncols = 0; 514d5821860SHong Zhang for (i=0; i<nzB; i++) { /* row < local row index */ 515d5821860SHong Zhang if (cmap[i] < start) idx[ncols++] = cmap[i]; 516d5821860SHong Zhang else break; 517d5821860SHong Zhang } 518d5821860SHong Zhang imark = i; 519d5821860SHong Zhang for (i=0; i<nzA; i++) idx[ncols++] = start + i; /* local rows */ 520d5821860SHong Zhang for (i=imark; i<nzB; i++) idx[ncols++] = cmap[i]; /* row > local row index */ 521d5821860SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,ncols,idx,PETSC_OWN_POINTER,&mult->isrowb);CHKERRQ(ierr); 522d5821860SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,B->cmap->N,0,1,&mult->iscolb);CHKERRQ(ierr); 523d5821860SHong Zhang 524d5821860SHong Zhang /* get isrowa: all local rows of A */ 525d5821860SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,A->rmap->n,A->rmap->rstart,1,&mult->isrowa);CHKERRQ(ierr); 526d5821860SHong Zhang 527d5821860SHong Zhang /* Below should go to MatMatMultNumeric_MPIAIJ_MPIAIJ() - How to generate C there? */ 5282499ec78SHong Zhang /* create a seq matrix B_seq = submatrix of B by taking rows of B that equal to nonzero col of A */ 529d5821860SHong Zhang ierr = MatGetSubMatrices(B,1,&mult->isrowb,&mult->iscolb,MAT_INITIAL_MATRIX,&seq);CHKERRQ(ierr); 530d5821860SHong Zhang mult->B_seq = *seq; 531d5821860SHong Zhang ierr = PetscFree(seq);CHKERRQ(ierr); 5326291f5a6SHong Zhang #if defined(DEBUG_MATMATMULT) 5336291f5a6SHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] B_seq is done...\n",rank); 5346291f5a6SHong Zhang #endif 5352499ec78SHong Zhang 5362499ec78SHong Zhang /* create a seq matrix A_seq = submatrix of A by taking all local rows of A */ 537d5821860SHong Zhang ierr = MatGetSubMatrices(A,1,&mult->isrowa,&mult->isrowb,MAT_INITIAL_MATRIX,&seq);CHKERRQ(ierr); 538d5821860SHong Zhang mult->A_loc = *seq; 539d5821860SHong Zhang ierr = PetscFree(seq);CHKERRQ(ierr); 5406291f5a6SHong Zhang #if defined(DEBUG_MATMATMULT) 541e9e4536cSHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] A_loc is done...\n",rank); 5426291f5a6SHong Zhang #endif 5432499ec78SHong Zhang 5442499ec78SHong Zhang /* compute C_seq = A_seq * B_seq */ 545e9e4536cSHong Zhang ierr = MatMatMultSymbolic_SeqAIJ_SeqAIJ_SparseAxpy(mult->A_loc,mult->B_seq,fill,&mult->C_seq);CHKERRQ(ierr); 5466291f5a6SHong Zhang #if defined(DEBUG_MATMATMULT) 547e9e4536cSHong Zhang ierr = MPI_Barrier(comm);CHKERRQ(ierr); 548e9e4536cSHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] C_seq Symbolic is done...\n",rank); 549e9e4536cSHong Zhang #endif 550e9e4536cSHong Zhang ierr = MatMatMultNumeric_SeqAIJ_SeqAIJ_SparseAxpy(mult->A_loc,mult->B_seq,mult->C_seq);CHKERRQ(ierr); 551e9e4536cSHong Zhang #if defined(DEBUG_MATMATMULT) 552e9e4536cSHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] C_seq Numeric is done...\n",rank); 5536291f5a6SHong Zhang #endif 5542499ec78SHong Zhang 5552499ec78SHong Zhang /* create mpi matrix C by concatinating C_seq */ 5562499ec78SHong Zhang ierr = PetscObjectReference((PetscObject)mult->C_seq);CHKERRQ(ierr); /* prevent C_seq being destroyed by MatMerge() */ 557*9b8102ccSHong Zhang ierr = MatMergeSymbolic(((PetscObject)A)->comm,mult->C_seq,B->cmap->n,&AB);CHKERRQ(ierr); 558*9b8102ccSHong Zhang ierr = MatMergeNumeric(((PetscObject)A)->comm,mult->C_seq,B->cmap->n,AB);CHKERRQ(ierr); 5596291f5a6SHong Zhang #if defined(DEBUG_MATMATMULT) 5606291f5a6SHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] Merge is done...\n",rank); 5616291f5a6SHong Zhang #endif 5622499ec78SHong Zhang 5632499ec78SHong Zhang /* attach the supporting struct to C for reuse of symbolic C */ 564776b82aeSLisandro Dalcin ierr = PetscContainerCreate(PETSC_COMM_SELF,&container);CHKERRQ(ierr); 565776b82aeSLisandro Dalcin ierr = PetscContainerSetPointer(container,mult);CHKERRQ(ierr); 566776b82aeSLisandro Dalcin ierr = PetscContainerSetUserDestroy(container,PetscContainerDestroy_Mat_MatMatMultMPI);CHKERRQ(ierr); 567d5821860SHong Zhang ierr = PetscObjectCompose((PetscObject)AB,"Mat_MatMatMultMPI",(PetscObject)container);CHKERRQ(ierr); 568b160f555SLisandro Dalcin ierr = PetscContainerDestroy(&container);CHKERRQ(ierr); 56915f4e0f4SHong Zhang mult->skipNumeric = PETSC_TRUE; /* a numeric product is done here */ 570d5821860SHong Zhang mult->destroy = AB->ops->destroy; 571d5821860SHong Zhang mult->duplicate = AB->ops->duplicate; 5721634b032SHong Zhang AB->ops->matmultnumeric = MatMatMultNumeric_MPIAIJ_MPIAIJ_32_dev; 573a1a4e84aSHong Zhang AB->ops->destroy = MatDestroy_MPIAIJ_MatMatMult_32; 574a1a4e84aSHong Zhang AB->ops->duplicate = MatDuplicate_MPIAIJ_MatMatMult_32; 5758cdbd757SHong Zhang AB->ops->matmult = MatMatMult_MPIAIJ_MPIAIJ; 576d5821860SHong Zhang *C = AB; 5776291f5a6SHong Zhang #if defined(DEBUG_MATMATMULT) 5786291f5a6SHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] exit MatMatMultSymbolic_MPIAIJ_MPIAIJ_32()...\n",rank); 5796291f5a6SHong Zhang #endif 5802499ec78SHong Zhang PetscFunctionReturn(0); 5812499ec78SHong Zhang } 5822499ec78SHong Zhang 5839123193aSHong Zhang #undef __FUNCT__ 5849123193aSHong Zhang #define __FUNCT__ "MatMatMult_MPIAIJ_MPIDense" 5859123193aSHong Zhang PetscErrorCode MatMatMult_MPIAIJ_MPIDense(Mat A,Mat B,MatReuse scall,PetscReal fill,Mat *C) 5869123193aSHong Zhang { 5879123193aSHong Zhang PetscErrorCode ierr; 5889123193aSHong Zhang 5899123193aSHong Zhang PetscFunctionBegin; 5909123193aSHong Zhang if (scall == MAT_INITIAL_MATRIX){ 5919123193aSHong Zhang ierr = MatMatMultSymbolic_MPIAIJ_MPIDense(A,B,fill,C);CHKERRQ(ierr); 5929123193aSHong Zhang } 5939123193aSHong Zhang ierr = MatMatMultNumeric_MPIAIJ_MPIDense(A,B,*C);CHKERRQ(ierr); 5949123193aSHong Zhang PetscFunctionReturn(0); 5959123193aSHong Zhang } 5969123193aSHong Zhang 5974324174eSBarry Smith typedef struct { 5984324174eSBarry Smith Mat workB; 5994324174eSBarry Smith PetscScalar *rvalues,*svalues; 6004324174eSBarry Smith MPI_Request *rwaits,*swaits; 6014324174eSBarry Smith } MPIAIJ_MPIDense; 6024324174eSBarry Smith 6037af9e4fdSHong Zhang #undef __FUNCT__ 6047af9e4fdSHong Zhang #define __FUNCT__ "MPIAIJ_MPIDenseDestroy" 6054324174eSBarry Smith PetscErrorCode MPIAIJ_MPIDenseDestroy(void *ctx) 6064324174eSBarry Smith { 6074324174eSBarry Smith MPIAIJ_MPIDense *contents = (MPIAIJ_MPIDense*) ctx; 6084324174eSBarry Smith PetscErrorCode ierr; 6094324174eSBarry Smith 6104324174eSBarry Smith PetscFunctionBegin; 6116bf464f9SBarry Smith ierr = MatDestroy(&contents->workB);CHKERRQ(ierr); 6124324174eSBarry Smith ierr = PetscFree4(contents->rvalues,contents->svalues,contents->rwaits,contents->swaits);CHKERRQ(ierr); 6134324174eSBarry Smith ierr = PetscFree(contents);CHKERRQ(ierr); 6144324174eSBarry Smith PetscFunctionReturn(0); 6154324174eSBarry Smith } 6164324174eSBarry Smith 6179123193aSHong Zhang #undef __FUNCT__ 6189123193aSHong Zhang #define __FUNCT__ "MatMatMultSymbolic_MPIAIJ_MPIDense" 6199123193aSHong Zhang PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIDense(Mat A,Mat B,PetscReal fill,Mat *C) 6209123193aSHong Zhang { 6219123193aSHong Zhang PetscErrorCode ierr; 622f32d5d43SBarry Smith Mat_MPIAIJ *aij = (Mat_MPIAIJ*) A->data; 623d0f46423SBarry Smith PetscInt nz = aij->B->cmap->n; 624bf0cc555SLisandro Dalcin PetscContainer container; 6254324174eSBarry Smith MPIAIJ_MPIDense *contents; 6264324174eSBarry Smith VecScatter ctx = aij->Mvctx; 6274324174eSBarry Smith VecScatter_MPI_General *from = (VecScatter_MPI_General*) ctx->fromdata; 6284324174eSBarry Smith VecScatter_MPI_General *to = ( VecScatter_MPI_General*) ctx->todata; 629d0f46423SBarry Smith PetscInt m=A->rmap->n,n=B->cmap->n; 6309123193aSHong Zhang 6319123193aSHong Zhang PetscFunctionBegin; 632cb2480eaSBarry Smith ierr = MatCreate(((PetscObject)B)->comm,C);CHKERRQ(ierr); 633d0f46423SBarry Smith ierr = MatSetSizes(*C,m,n,A->rmap->N,B->cmap->N);CHKERRQ(ierr); 634cb2480eaSBarry Smith ierr = MatSetType(*C,MATMPIDENSE);CHKERRQ(ierr); 635cb2480eaSBarry Smith ierr = MatAssemblyBegin(*C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 636cb2480eaSBarry Smith ierr = MatAssemblyEnd(*C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 6378cdbd757SHong Zhang (*C)->ops->matmult = MatMatMult_MPIAIJ_MPIDense; 638f32d5d43SBarry Smith 6394324174eSBarry Smith ierr = PetscNew(MPIAIJ_MPIDense,&contents);CHKERRQ(ierr); 640f32d5d43SBarry Smith /* Create work matrix used to store off processor rows of B needed for local product */ 641d0f46423SBarry Smith ierr = MatCreateSeqDense(PETSC_COMM_SELF,nz,B->cmap->N,PETSC_NULL,&contents->workB);CHKERRQ(ierr); 6424324174eSBarry Smith /* Create work arrays needed */ 643d0f46423SBarry Smith ierr = PetscMalloc4(B->cmap->N*from->starts[from->n],PetscScalar,&contents->rvalues, 644d0f46423SBarry Smith B->cmap->N*to->starts[to->n],PetscScalar,&contents->svalues, 6454324174eSBarry Smith from->n,MPI_Request,&contents->rwaits, 6464324174eSBarry Smith to->n,MPI_Request,&contents->swaits);CHKERRQ(ierr); 6474324174eSBarry Smith 648bf0cc555SLisandro Dalcin ierr = PetscContainerCreate(((PetscObject)A)->comm,&container);CHKERRQ(ierr); 649bf0cc555SLisandro Dalcin ierr = PetscContainerSetPointer(container,contents);CHKERRQ(ierr); 650bf0cc555SLisandro Dalcin ierr = PetscContainerSetUserDestroy(container,MPIAIJ_MPIDenseDestroy);CHKERRQ(ierr); 651bf0cc555SLisandro Dalcin ierr = PetscObjectCompose((PetscObject)(*C),"workB",(PetscObject)container);CHKERRQ(ierr); 652bf0cc555SLisandro Dalcin ierr = PetscContainerDestroy(&container);CHKERRQ(ierr); 6539123193aSHong Zhang PetscFunctionReturn(0); 6549123193aSHong Zhang } 6559123193aSHong Zhang 6567af9e4fdSHong Zhang #undef __FUNCT__ 6577af9e4fdSHong Zhang #define __FUNCT__ "MatMPIDenseScatter" 658f32d5d43SBarry Smith /* 6592636ff26SBarry Smith Performs an efficient scatter on the rows of B needed by this process; this is 6602636ff26SBarry Smith a modification of the VecScatterBegin_() routines. 661f32d5d43SBarry Smith */ 6624324174eSBarry Smith PetscErrorCode MatMPIDenseScatter(Mat A,Mat B,Mat C,Mat *outworkB) 663f32d5d43SBarry Smith { 664f32d5d43SBarry Smith Mat_MPIAIJ *aij = (Mat_MPIAIJ*)A->data; 665f32d5d43SBarry Smith PetscErrorCode ierr; 666f32d5d43SBarry Smith PetscScalar *b,*w,*svalues,*rvalues; 667f32d5d43SBarry Smith VecScatter ctx = aij->Mvctx; 668f32d5d43SBarry Smith VecScatter_MPI_General *from = (VecScatter_MPI_General*) ctx->fromdata; 669f32d5d43SBarry Smith VecScatter_MPI_General *to = ( VecScatter_MPI_General*) ctx->todata; 670f32d5d43SBarry Smith PetscInt i,j,k; 671aa5bb8c0SSatish Balay PetscInt *sindices,*sstarts,*rindices,*rstarts; 672aa5bb8c0SSatish Balay PetscMPIInt *sprocs,*rprocs,nrecvs; 673f32d5d43SBarry Smith MPI_Request *swaits,*rwaits; 6747adad957SLisandro Dalcin MPI_Comm comm = ((PetscObject)A)->comm; 675d0f46423SBarry Smith PetscMPIInt tag = ((PetscObject)ctx)->tag,ncols = B->cmap->N, nrows = aij->B->cmap->n,imdex,nrowsB = B->rmap->n; 676f32d5d43SBarry Smith MPI_Status status; 6774324174eSBarry Smith MPIAIJ_MPIDense *contents; 678bf0cc555SLisandro Dalcin PetscContainer container; 6794324174eSBarry Smith Mat workB; 680f32d5d43SBarry Smith 681f32d5d43SBarry Smith PetscFunctionBegin; 682bf0cc555SLisandro Dalcin ierr = PetscObjectQuery((PetscObject)C,"workB",(PetscObject*)&container);CHKERRQ(ierr); 683bf0cc555SLisandro Dalcin if (!container) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Container does not exit"); 684bf0cc555SLisandro Dalcin ierr = PetscContainerGetPointer(container,(void**)&contents);CHKERRQ(ierr); 6854324174eSBarry Smith 6864324174eSBarry Smith workB = *outworkB = contents->workB; 687e32f2f54SBarry Smith if (nrows != workB->rmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Number of rows of workB %D not equal to columns of aij->B %D",nrows,workB->cmap->n); 688f32d5d43SBarry Smith sindices = to->indices; 689f32d5d43SBarry Smith sstarts = to->starts; 690f32d5d43SBarry Smith sprocs = to->procs; 6914324174eSBarry Smith swaits = contents->swaits; 6924324174eSBarry Smith svalues = contents->svalues; 693f32d5d43SBarry Smith 694f32d5d43SBarry Smith rindices = from->indices; 695f32d5d43SBarry Smith rstarts = from->starts; 696f32d5d43SBarry Smith rprocs = from->procs; 6974324174eSBarry Smith rwaits = contents->rwaits; 6984324174eSBarry Smith rvalues = contents->rvalues; 699f32d5d43SBarry Smith 700f32d5d43SBarry Smith ierr = MatGetArray(B,&b);CHKERRQ(ierr); 701f32d5d43SBarry Smith ierr = MatGetArray(workB,&w);CHKERRQ(ierr); 702f32d5d43SBarry Smith 703f32d5d43SBarry Smith for (i=0; i<from->n; i++) { 704f32d5d43SBarry Smith ierr = MPI_Irecv(rvalues+ncols*rstarts[i],ncols*(rstarts[i+1]-rstarts[i]),MPIU_SCALAR,rprocs[i],tag,comm,rwaits+i);CHKERRQ(ierr); 705f32d5d43SBarry Smith } 706f32d5d43SBarry Smith 707f32d5d43SBarry Smith for (i=0; i<to->n; i++) { 708f32d5d43SBarry Smith /* pack a message at a time */ 709f32d5d43SBarry Smith CHKMEMQ; 710f32d5d43SBarry Smith for (j=0; j<sstarts[i+1]-sstarts[i]; j++){ 711f32d5d43SBarry Smith for (k=0; k<ncols; k++) { 712f32d5d43SBarry Smith svalues[ncols*(sstarts[i] + j) + k] = b[sindices[sstarts[i]+j] + nrowsB*k]; 7132636ff26SBarry Smith } 7142636ff26SBarry Smith } 715f32d5d43SBarry Smith CHKMEMQ; 716f32d5d43SBarry Smith ierr = MPI_Isend(svalues+ncols*sstarts[i],ncols*(sstarts[i+1]-sstarts[i]),MPIU_SCALAR,sprocs[i],tag,comm,swaits+i);CHKERRQ(ierr); 717f32d5d43SBarry Smith } 7182636ff26SBarry Smith 719f32d5d43SBarry Smith nrecvs = from->n; 720f32d5d43SBarry Smith while (nrecvs) { 721f32d5d43SBarry Smith ierr = MPI_Waitany(from->n,rwaits,&imdex,&status);CHKERRQ(ierr); 722f32d5d43SBarry Smith nrecvs--; 723f32d5d43SBarry Smith /* unpack a message at a time */ 724f32d5d43SBarry Smith CHKMEMQ; 725f32d5d43SBarry Smith for (j=0; j<rstarts[imdex+1]-rstarts[imdex]; j++){ 726f32d5d43SBarry Smith for (k=0; k<ncols; k++) { 727f32d5d43SBarry Smith w[rindices[rstarts[imdex]+j] + nrows*k] = rvalues[ncols*(rstarts[imdex] + j) + k]; 7282636ff26SBarry Smith } 7292636ff26SBarry Smith } 730f32d5d43SBarry Smith CHKMEMQ; 731f32d5d43SBarry Smith } 732cb9801acSJed Brown if (to->n) {ierr = MPI_Waitall(to->n,swaits,to->sstatus);CHKERRQ(ierr);} 733f32d5d43SBarry Smith 734f32d5d43SBarry Smith ierr = MatRestoreArray(B,&b);CHKERRQ(ierr); 735f32d5d43SBarry Smith ierr = MatRestoreArray(workB,&w);CHKERRQ(ierr); 736f32d5d43SBarry Smith ierr = MatAssemblyBegin(workB,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 737f32d5d43SBarry Smith ierr = MatAssemblyEnd(workB,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 738f32d5d43SBarry Smith PetscFunctionReturn(0); 739f32d5d43SBarry Smith } 740f32d5d43SBarry Smith extern PetscErrorCode MatMatMultNumericAdd_SeqAIJ_SeqDense(Mat,Mat,Mat); 741f32d5d43SBarry Smith 7429123193aSHong Zhang #undef __FUNCT__ 7439123193aSHong Zhang #define __FUNCT__ "MatMatMultNumeric_MPIAIJ_MPIDense" 7449123193aSHong Zhang PetscErrorCode MatMatMultNumeric_MPIAIJ_MPIDense(Mat A,Mat B,Mat C) 7459123193aSHong Zhang { 7469123193aSHong Zhang PetscErrorCode ierr; 747f32d5d43SBarry Smith Mat_MPIAIJ *aij = (Mat_MPIAIJ*)A->data; 748f32d5d43SBarry Smith Mat_MPIDense *bdense = (Mat_MPIDense*)B->data; 749f32d5d43SBarry Smith Mat_MPIDense *cdense = (Mat_MPIDense*)C->data; 750f32d5d43SBarry Smith Mat workB; 7519123193aSHong Zhang 7529123193aSHong Zhang PetscFunctionBegin; 7539123193aSHong Zhang 754f32d5d43SBarry Smith /* diagonal block of A times all local rows of B*/ 755f32d5d43SBarry Smith ierr = MatMatMultNumeric_SeqAIJ_SeqDense(aij->A,bdense->A,cdense->A);CHKERRQ(ierr); 756f32d5d43SBarry Smith 757f32d5d43SBarry Smith /* get off processor parts of B needed to complete the product */ 7584324174eSBarry Smith ierr = MatMPIDenseScatter(A,B,C,&workB);CHKERRQ(ierr); 759f32d5d43SBarry Smith 760f32d5d43SBarry Smith /* off-diagonal block of A times nonlocal rows of B */ 761f32d5d43SBarry Smith ierr = MatMatMultNumericAdd_SeqAIJ_SeqDense(aij->B,workB,cdense->A);CHKERRQ(ierr); 7629123193aSHong Zhang ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 7639123193aSHong Zhang ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 7649123193aSHong Zhang PetscFunctionReturn(0); 7659123193aSHong Zhang } 7661634b032SHong Zhang /* This routine is called ONLY in the case of reusing previously computed symbolic C */ 7671634b032SHong Zhang #undef __FUNCT__ 7681634b032SHong Zhang #define __FUNCT__ "MatMatMultNumeric_MPIAIJ_MPIAIJ_32" 7691634b032SHong Zhang PetscErrorCode MatMatMultNumeric_MPIAIJ_MPIAIJ_32(Mat A,Mat B,Mat C) 7701634b032SHong Zhang { 7711634b032SHong Zhang PetscErrorCode ierr; 7721634b032SHong Zhang Mat *seq; 7731634b032SHong Zhang Mat_MatMatMultMPI *mult; 7741634b032SHong Zhang PetscContainer container; 7759123193aSHong Zhang 7761634b032SHong Zhang PetscFunctionBegin; 7771634b032SHong Zhang ierr = PetscObjectQuery((PetscObject)C,"Mat_MatMatMultMPI",(PetscObject *)&container);CHKERRQ(ierr); 7781634b032SHong Zhang if (!container) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Container does not exit"); 7791634b032SHong Zhang ierr = PetscContainerGetPointer(container,(void **)&mult);CHKERRQ(ierr); 7801634b032SHong Zhang if (mult->skipNumeric){ /* first numeric product is done during symbolic product */ 7811634b032SHong Zhang mult->skipNumeric = PETSC_FALSE; 7821634b032SHong Zhang PetscFunctionReturn(0); 7831634b032SHong Zhang } 7841634b032SHong Zhang #if defined(DEBUG_MATMATMULT) 7851634b032SHong Zhang PetscMPIInt rank; 7861634b032SHong Zhang ierr = MPI_Comm_rank(((PetscObject)C)->comm,&rank);CHKERRQ(ierr); 7871634b032SHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] call MatMatMultNumeric_MPIAIJ_MPIAIJ_32()...\n",rank); 7881634b032SHong Zhang #endif 7891634b032SHong Zhang 7901634b032SHong Zhang seq = &mult->B_seq; 7911634b032SHong Zhang ierr = MatGetSubMatrices(B,1,&mult->isrowb,&mult->iscolb,MAT_REUSE_MATRIX,&seq);CHKERRQ(ierr); 7921634b032SHong Zhang mult->B_seq = *seq; 7931634b032SHong Zhang 7941634b032SHong Zhang seq = &mult->A_loc; 7951634b032SHong Zhang ierr = MatGetSubMatrices(A,1,&mult->isrowa,&mult->isrowb,MAT_REUSE_MATRIX,&seq);CHKERRQ(ierr); 7961634b032SHong Zhang mult->A_loc = *seq; 7971634b032SHong Zhang 7981634b032SHong Zhang ierr = MatMatMult_SeqAIJ_SeqAIJ(mult->A_loc,mult->B_seq,MAT_REUSE_MATRIX,0.0,&mult->C_seq);CHKERRQ(ierr); 7991634b032SHong Zhang 8001634b032SHong Zhang ierr = PetscObjectReference((PetscObject)mult->C_seq);CHKERRQ(ierr); 8011634b032SHong Zhang ierr = MatMerge(((PetscObject)A)->comm,mult->C_seq,B->cmap->n,MAT_REUSE_MATRIX,&C);CHKERRQ(ierr); 8021634b032SHong Zhang PetscFunctionReturn(0); 8031634b032SHong Zhang } 8041634b032SHong Zhang 8051634b032SHong Zhang #undef __FUNCT__ 8061634b032SHong Zhang #define __FUNCT__ "MatMatMultSymbolic_MPIAIJ_MPIAIJ_32" 8071634b032SHong Zhang PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ_32(Mat A,Mat B,PetscReal fill,Mat *C) 8081634b032SHong Zhang { 8091634b032SHong Zhang PetscErrorCode ierr; 8101634b032SHong Zhang PetscInt start,end; 8111634b032SHong Zhang Mat_MatMatMultMPI *mult; 8121634b032SHong Zhang PetscContainer container; 8131634b032SHong Zhang 8141634b032SHong Zhang PetscFunctionBegin; 8151634b032SHong Zhang #if defined(DEBUG_MATMATMULT) 8161634b032SHong Zhang PetscMPIInt rank; 8171634b032SHong Zhang ierr = MPI_Comm_rank(((PetscObject)A)->comm,&rank);CHKERRQ(ierr); 8181634b032SHong Zhang if (!rank) ierr = PetscPrintf(PETSC_COMM_SELF,"[%d] call MatMatMultSymbolic_MPIAIJ_MPIAIJ_32()...\n",rank); 8191634b032SHong Zhang #endif 8201634b032SHong Zhang if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend){ 8211634b032SHong Zhang SETERRQ4(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, (%D, %D) != (%D,%D)",A->cmap->rstart,A->cmap->rend,B->rmap->rstart,B->rmap->rend); 8221634b032SHong Zhang } 8231634b032SHong Zhang ierr = PetscNew(Mat_MatMatMultMPI,&mult);CHKERRQ(ierr); 8241634b032SHong Zhang 8251634b032SHong Zhang /* create a seq matrix B_seq = submatrix of B by taking rows of B that equal to nonzero col of A */ 8261634b032SHong Zhang ierr = MatGetBrowsOfAcols(A,B,MAT_INITIAL_MATRIX,&mult->isrowb,&mult->iscolb,&mult->B_seq);CHKERRQ(ierr); 8271634b032SHong Zhang 8281634b032SHong Zhang /* create a seq matrix A_seq = submatrix of A by taking all local rows of A */ 8291634b032SHong Zhang start = A->rmap->rstart; end = A->rmap->rend; 8301634b032SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,end-start,start,1,&mult->isrowa);CHKERRQ(ierr); 8311634b032SHong Zhang ierr = MatMPIAIJGetLocalMatCondensed(A,MAT_INITIAL_MATRIX,&mult->isrowa,&mult->isrowb,&mult->A_loc);CHKERRQ(ierr); 8321634b032SHong Zhang 8331634b032SHong Zhang /* compute C_seq = A_seq * B_seq */ 8341634b032SHong Zhang ierr = MatMatMult_SeqAIJ_SeqAIJ(mult->A_loc,mult->B_seq,MAT_INITIAL_MATRIX,fill,&mult->C_seq);CHKERRQ(ierr); 8351634b032SHong Zhang 8361634b032SHong Zhang /* create mpi matrix C by concatinating C_seq */ 8371634b032SHong Zhang ierr = PetscObjectReference((PetscObject)mult->C_seq);CHKERRQ(ierr); /* prevent C_seq being destroyed by MatMerge() */ 8381634b032SHong Zhang ierr = MatMerge(((PetscObject)A)->comm,mult->C_seq,B->cmap->n,MAT_INITIAL_MATRIX,C);CHKERRQ(ierr); 8391634b032SHong Zhang 8401634b032SHong Zhang /* attach the supporting struct to C for reuse of symbolic C */ 8411634b032SHong Zhang ierr = PetscContainerCreate(PETSC_COMM_SELF,&container);CHKERRQ(ierr); 8421634b032SHong Zhang ierr = PetscContainerSetPointer(container,mult);CHKERRQ(ierr); 8431634b032SHong Zhang ierr = PetscContainerSetUserDestroy(container,PetscContainerDestroy_Mat_MatMatMultMPI);CHKERRQ(ierr); 8441634b032SHong Zhang ierr = PetscObjectCompose((PetscObject)(*C),"Mat_MatMatMultMPI",(PetscObject)container);CHKERRQ(ierr); 8451634b032SHong Zhang ierr = PetscContainerDestroy(&container);CHKERRQ(ierr); 8461634b032SHong Zhang mult->skipNumeric = PETSC_TRUE; /* a numeric product is done here */ 8471634b032SHong Zhang mult->destroy = (*C)->ops->destroy; 8481634b032SHong Zhang mult->duplicate = (*C)->ops->duplicate; 8491634b032SHong Zhang (*C)->ops->destroy = MatDestroy_MPIAIJ_MatMatMult_32; 8501634b032SHong Zhang (*C)->ops->duplicate = MatDuplicate_MPIAIJ_MatMatMult_32; 8511634b032SHong Zhang (*C)->ops->matmultnumeric = MatMatMultNumeric_MPIAIJ_MPIAIJ_32; 8521634b032SHong Zhang PetscFunctionReturn(0); 8531634b032SHong Zhang } 854