xref: /petsc/src/mat/impls/aij/mpi/mumps/mumps.c (revision 35928de7f7ca26a8de4874654cc856a8423a00bd)
11c2a3de1SBarry Smith 
2397b6df1SKris Buschelman /*
3c2b5dc30SHong Zhang     Provides an interface to the MUMPS sparse solver
4397b6df1SKris Buschelman */
551d5961aSHong Zhang 
6c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> /*I  "petscmat.h"  I*/
7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h>
87ee00b23SStefano Zampini #include <../src/mat/impls/sell/mpi/mpisell.h>
9397b6df1SKris Buschelman 
10397b6df1SKris Buschelman EXTERN_C_BEGIN
11397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX)
122907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE)
132907cef9SHong Zhang #include <cmumps_c.h>
142907cef9SHong Zhang #else
15c6db04a5SJed Brown #include <zmumps_c.h>
162907cef9SHong Zhang #endif
172907cef9SHong Zhang #else
182907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE)
192907cef9SHong Zhang #include <smumps_c.h>
20397b6df1SKris Buschelman #else
21c6db04a5SJed Brown #include <dmumps_c.h>
22397b6df1SKris Buschelman #endif
232907cef9SHong Zhang #endif
24397b6df1SKris Buschelman EXTERN_C_END
25397b6df1SKris Buschelman #define JOB_INIT -1
263d472b54SHong Zhang #define JOB_FACTSYMBOLIC 1
273d472b54SHong Zhang #define JOB_FACTNUMERIC 2
283d472b54SHong Zhang #define JOB_SOLVE 3
29397b6df1SKris Buschelman #define JOB_END -2
303d472b54SHong Zhang 
312907cef9SHong Zhang /* calls to MUMPS */
322907cef9SHong Zhang #if defined(PETSC_USE_COMPLEX)
332907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE)
343ab56b82SJunchao Zhang #define MUMPS_c cmumps_c
352907cef9SHong Zhang #else
363ab56b82SJunchao Zhang #define MUMPS_c zmumps_c
372907cef9SHong Zhang #endif
382907cef9SHong Zhang #else
392907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE)
403ab56b82SJunchao Zhang #define MUMPS_c smumps_c
412907cef9SHong Zhang #else
423ab56b82SJunchao Zhang #define MUMPS_c dmumps_c
432907cef9SHong Zhang #endif
442907cef9SHong Zhang #endif
452907cef9SHong Zhang 
46217d3b1eSJunchao Zhang /* if using PETSc OpenMP support, we only call MUMPS on master ranks. Before/after the call, we change/restore CPUs the master ranks can run on */
473ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT)
483ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \
493ab56b82SJunchao Zhang   do { \
503ab56b82SJunchao Zhang     if (mumps->use_petsc_omp_support) { \
513ab56b82SJunchao Zhang       if (mumps->is_omp_master) { \
523ab56b82SJunchao Zhang         ierr = PetscOmpCtrlOmpRegionOnMasterBegin(mumps->omp_ctrl);CHKERRQ(ierr); \
533ab56b82SJunchao Zhang         MUMPS_c(&mumps->id); \
543ab56b82SJunchao Zhang         ierr = PetscOmpCtrlOmpRegionOnMasterEnd(mumps->omp_ctrl);CHKERRQ(ierr); \
553ab56b82SJunchao Zhang       } \
563ab56b82SJunchao Zhang       ierr = PetscOmpCtrlBarrier(mumps->omp_ctrl);CHKERRQ(ierr); \
573ab56b82SJunchao Zhang     } else { \
583ab56b82SJunchao Zhang       MUMPS_c(&mumps->id); \
593ab56b82SJunchao Zhang     } \
603ab56b82SJunchao Zhang   } while(0)
613ab56b82SJunchao Zhang #else
623ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \
633ab56b82SJunchao Zhang   do { MUMPS_c(&mumps->id); } while (0)
643ab56b82SJunchao Zhang #endif
653ab56b82SJunchao Zhang 
66940cd9d6SSatish Balay /* declare MumpsScalar */
67940cd9d6SSatish Balay #if defined(PETSC_USE_COMPLEX)
68940cd9d6SSatish Balay #if defined(PETSC_USE_REAL_SINGLE)
69940cd9d6SSatish Balay #define MumpsScalar mumps_complex
70940cd9d6SSatish Balay #else
71940cd9d6SSatish Balay #define MumpsScalar mumps_double_complex
72940cd9d6SSatish Balay #endif
73940cd9d6SSatish Balay #else
74940cd9d6SSatish Balay #define MumpsScalar PetscScalar
75940cd9d6SSatish Balay #endif
763d472b54SHong Zhang 
77397b6df1SKris Buschelman /* macros s.t. indices match MUMPS documentation */
78397b6df1SKris Buschelman #define ICNTL(I) icntl[(I)-1]
79397b6df1SKris Buschelman #define CNTL(I) cntl[(I)-1]
80397b6df1SKris Buschelman #define INFOG(I) infog[(I)-1]
81a7aca84bSHong Zhang #define INFO(I) info[(I)-1]
82397b6df1SKris Buschelman #define RINFOG(I) rinfog[(I)-1]
83adc1d99fSHong Zhang #define RINFO(I) rinfo[(I)-1]
84397b6df1SKris Buschelman 
85397b6df1SKris Buschelman typedef struct {
86397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX)
872907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE)
882907cef9SHong Zhang   CMUMPS_STRUC_C id;
892907cef9SHong Zhang #else
90397b6df1SKris Buschelman   ZMUMPS_STRUC_C id;
912907cef9SHong Zhang #endif
922907cef9SHong Zhang #else
932907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE)
942907cef9SHong Zhang   SMUMPS_STRUC_C id;
95397b6df1SKris Buschelman #else
96397b6df1SKris Buschelman   DMUMPS_STRUC_C id;
97397b6df1SKris Buschelman #endif
982907cef9SHong Zhang #endif
992907cef9SHong Zhang 
100397b6df1SKris Buschelman   MatStructure matstruc;
1012d4298aeSJunchao Zhang   PetscMPIInt  myid,petsc_size;
102a5e57a09SHong Zhang   PetscInt     *irn,*jcn,nz,sym;
103397b6df1SKris Buschelman   PetscScalar  *val;
1042d4298aeSJunchao Zhang   MPI_Comm     mumps_comm;
105a5e57a09SHong Zhang   PetscInt     ICNTL9_pre;           /* check if ICNTL(9) is changed from previous MatSolve */
106801fbe65SHong Zhang   VecScatter   scat_rhs, scat_sol;   /* used by MatSolve() */
107801fbe65SHong Zhang   Vec          b_seq,x_seq;
108b34f08ffSHong Zhang   PetscInt     ninfo,*info;          /* display INFO */
109b5fa320bSStefano Zampini   PetscInt     sizeredrhs;
11059ac8732SStefano Zampini   PetscScalar  *schur_sol;
11159ac8732SStefano Zampini   PetscInt     schur_sizesol;
1122205254eSKarl Rupp 
1133ab56b82SJunchao Zhang   PetscBool    use_petsc_omp_support;
1143ab56b82SJunchao Zhang   PetscOmpCtrl omp_ctrl;             /* an OpenMP controler that blocked processes will release their CPU (MPI_Barrier does not have this guarantee) */
1153ab56b82SJunchao Zhang   MPI_Comm     petsc_comm,omp_comm;  /* petsc_comm is petsc matrix's comm */
1163ab56b82SJunchao Zhang   PetscMPIInt  mpinz;                /* on master rank, nz = sum(mpinz) over omp_comm; on other ranks, mpinz = nz*/
1173ab56b82SJunchao Zhang   PetscMPIInt  omp_comm_size;
1183ab56b82SJunchao Zhang   PetscBool    is_omp_master;        /* is this rank the master of omp_comm */
1193ab56b82SJunchao Zhang   PetscMPIInt  *recvcount,*displs;
1203ab56b82SJunchao Zhang 
121bccb9932SShri Abhyankar   PetscErrorCode (*ConvertToTriples)(Mat, int, MatReuse, int*, int**, int**, PetscScalar**);
122f0c56d0fSKris Buschelman } Mat_MUMPS;
123f0c56d0fSKris Buschelman 
12409573ac7SBarry Smith extern PetscErrorCode MatDuplicate_MUMPS(Mat,MatDuplicateOption,Mat*);
125b24902e0SBarry Smith 
12659ac8732SStefano Zampini static PetscErrorCode MatMumpsResetSchur_Private(Mat_MUMPS* mumps)
127b5fa320bSStefano Zampini {
128b5fa320bSStefano Zampini   PetscErrorCode ierr;
129b5fa320bSStefano Zampini 
130b5fa320bSStefano Zampini   PetscFunctionBegin;
13159ac8732SStefano Zampini   ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr);
13259ac8732SStefano Zampini   ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr);
13359ac8732SStefano Zampini   ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr);
13459ac8732SStefano Zampini   mumps->id.size_schur = 0;
135b3cb21ddSStefano Zampini   mumps->id.schur_lld  = 0;
13659ac8732SStefano Zampini   mumps->id.ICNTL(19)  = 0;
13759ac8732SStefano Zampini   PetscFunctionReturn(0);
13859ac8732SStefano Zampini }
13959ac8732SStefano Zampini 
140b3cb21ddSStefano Zampini /* solve with rhs in mumps->id.redrhs and return in the same location */
141b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsSolveSchur_Private(Mat F)
14259ac8732SStefano Zampini {
143b3cb21ddSStefano Zampini   Mat_MUMPS            *mumps=(Mat_MUMPS*)F->data;
144b3cb21ddSStefano Zampini   Mat                  S,B,X;
145b3cb21ddSStefano Zampini   MatFactorSchurStatus schurstatus;
146b3cb21ddSStefano Zampini   PetscInt             sizesol;
14759ac8732SStefano Zampini   PetscErrorCode       ierr;
14859ac8732SStefano Zampini 
14959ac8732SStefano Zampini   PetscFunctionBegin;
150b3cb21ddSStefano Zampini   ierr = MatFactorFactorizeSchurComplement(F);CHKERRQ(ierr);
151b3cb21ddSStefano Zampini   ierr = MatFactorGetSchurComplement(F,&S,&schurstatus);CHKERRQ(ierr);
152b3cb21ddSStefano Zampini   ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&B);CHKERRQ(ierr);
153b3cb21ddSStefano Zampini   switch (schurstatus) {
154b3cb21ddSStefano Zampini   case MAT_FACTOR_SCHUR_FACTORED:
155b3cb21ddSStefano Zampini     ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&X);CHKERRQ(ierr);
156b3cb21ddSStefano Zampini     if (!mumps->id.ICNTL(9)) { /* transpose solve */
157b3cb21ddSStefano Zampini       ierr = MatMatSolveTranspose(S,B,X);CHKERRQ(ierr);
15859ac8732SStefano Zampini     } else {
159b3cb21ddSStefano Zampini       ierr = MatMatSolve(S,B,X);CHKERRQ(ierr);
16059ac8732SStefano Zampini     }
161b3cb21ddSStefano Zampini     break;
162b3cb21ddSStefano Zampini   case MAT_FACTOR_SCHUR_INVERTED:
163b3cb21ddSStefano Zampini     sizesol = mumps->id.nrhs*mumps->id.size_schur;
16459ac8732SStefano Zampini     if (!mumps->schur_sol || sizesol > mumps->schur_sizesol) {
16559ac8732SStefano Zampini       ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr);
16659ac8732SStefano Zampini       ierr = PetscMalloc1(sizesol,&mumps->schur_sol);CHKERRQ(ierr);
16759ac8732SStefano Zampini       mumps->schur_sizesol = sizesol;
168b5fa320bSStefano Zampini     }
169b3cb21ddSStefano Zampini     ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,mumps->schur_sol,&X);CHKERRQ(ierr);
17059ac8732SStefano Zampini     if (!mumps->id.ICNTL(9)) { /* transpose solve */
171b3cb21ddSStefano Zampini       ierr = MatTransposeMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr);
172b5fa320bSStefano Zampini     } else {
173b3cb21ddSStefano Zampini       ierr = MatMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr);
174b5fa320bSStefano Zampini     }
175b3cb21ddSStefano Zampini     ierr = MatCopy(X,B,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
176b3cb21ddSStefano Zampini     break;
177b3cb21ddSStefano Zampini   default:
178b3cb21ddSStefano Zampini     SETERRQ1(PetscObjectComm((PetscObject)F),PETSC_ERR_SUP,"Unhandled MatFactorSchurStatus %D",F->schur_status);
179b3cb21ddSStefano Zampini     break;
18059ac8732SStefano Zampini   }
181b3cb21ddSStefano Zampini   ierr = MatFactorRestoreSchurComplement(F,&S,schurstatus);CHKERRQ(ierr);
182b3cb21ddSStefano Zampini   ierr = MatDestroy(&B);CHKERRQ(ierr);
183b3cb21ddSStefano Zampini   ierr = MatDestroy(&X);CHKERRQ(ierr);
184b5fa320bSStefano Zampini   PetscFunctionReturn(0);
185b5fa320bSStefano Zampini }
186b5fa320bSStefano Zampini 
187b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsHandleSchur_Private(Mat F, PetscBool expansion)
188b5fa320bSStefano Zampini {
189b3cb21ddSStefano Zampini   Mat_MUMPS     *mumps=(Mat_MUMPS*)F->data;
190b5fa320bSStefano Zampini   PetscErrorCode ierr;
191b5fa320bSStefano Zampini 
192b5fa320bSStefano Zampini   PetscFunctionBegin;
193b5fa320bSStefano Zampini   if (!mumps->id.ICNTL(19)) { /* do nothing when Schur complement has not been computed */
194b5fa320bSStefano Zampini     PetscFunctionReturn(0);
195b5fa320bSStefano Zampini   }
196b8f61ee1SStefano Zampini   if (!expansion) { /* prepare for the condensation step */
197b5fa320bSStefano Zampini     PetscInt sizeredrhs = mumps->id.nrhs*mumps->id.size_schur;
198b5fa320bSStefano Zampini     /* allocate MUMPS internal array to store reduced right-hand sides */
199b5fa320bSStefano Zampini     if (!mumps->id.redrhs || sizeredrhs > mumps->sizeredrhs) {
200b5fa320bSStefano Zampini       ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr);
201b5fa320bSStefano Zampini       mumps->id.lredrhs = mumps->id.size_schur;
202b5fa320bSStefano Zampini       ierr = PetscMalloc1(mumps->id.nrhs*mumps->id.lredrhs,&mumps->id.redrhs);CHKERRQ(ierr);
203b5fa320bSStefano Zampini       mumps->sizeredrhs = mumps->id.nrhs*mumps->id.lredrhs;
204b5fa320bSStefano Zampini     }
205b5fa320bSStefano Zampini     mumps->id.ICNTL(26) = 1; /* condensation phase */
206b5fa320bSStefano Zampini   } else { /* prepare for the expansion step */
207b8f61ee1SStefano Zampini     /* solve Schur complement (this has to be done by the MUMPS user, so basically us) */
208b3cb21ddSStefano Zampini     ierr = MatMumpsSolveSchur_Private(F);CHKERRQ(ierr);
209b5fa320bSStefano Zampini     mumps->id.ICNTL(26) = 2; /* expansion phase */
2103ab56b82SJunchao Zhang     PetscMUMPS_c(mumps);
211b5fa320bSStefano Zampini     if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1));
212b5fa320bSStefano Zampini     /* restore defaults */
213b5fa320bSStefano Zampini     mumps->id.ICNTL(26) = -1;
214d3d598ffSStefano Zampini     /* free MUMPS internal array for redrhs if we have solved for multiple rhs in order to save memory space */
215d3d598ffSStefano Zampini     if (mumps->id.nrhs > 1) {
216d3d598ffSStefano Zampini       ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr);
217d3d598ffSStefano Zampini       mumps->id.lredrhs = 0;
218d3d598ffSStefano Zampini       mumps->sizeredrhs = 0;
219d3d598ffSStefano Zampini     }
220b5fa320bSStefano Zampini   }
221b5fa320bSStefano Zampini   PetscFunctionReturn(0);
222b5fa320bSStefano Zampini }
223b5fa320bSStefano Zampini 
224397b6df1SKris Buschelman /*
225d341cd04SHong Zhang   MatConvertToTriples_A_B - convert Petsc matrix to triples: row[nz], col[nz], val[nz]
226d341cd04SHong Zhang 
227397b6df1SKris Buschelman   input:
22867877ebaSShri Abhyankar     A       - matrix in aij,baij or sbaij (bs=1) format
229397b6df1SKris Buschelman     shift   - 0: C style output triple; 1: Fortran style output triple.
230bccb9932SShri Abhyankar     reuse   - MAT_INITIAL_MATRIX: spaces are allocated and values are set for the triple
231bccb9932SShri Abhyankar               MAT_REUSE_MATRIX:   only the values in v array are updated
232397b6df1SKris Buschelman   output:
233397b6df1SKris Buschelman     nnz     - dim of r, c, and v (number of local nonzero entries of A)
234397b6df1SKris Buschelman     r, c, v - row and col index, matrix values (matrix triples)
235eb9baa12SBarry Smith 
236eb9baa12SBarry Smith   The returned values r, c, and sometimes v are obtained in a single PetscMalloc(). Then in MatDestroy_MUMPS() it is
2377ee00b23SStefano Zampini   freed with PetscFree(mumps->irn);  This is not ideal code, the fact that v is ONLY sometimes part of mumps->irn means
238eb9baa12SBarry Smith   that the PetscMalloc() cannot easily be replaced with a PetscMalloc3().
239eb9baa12SBarry Smith 
240397b6df1SKris Buschelman  */
24116ebf90aSShri Abhyankar 
242bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
243b24902e0SBarry Smith {
244185f6596SHong Zhang   const PetscInt *ai,*aj,*ajj,M=A->rmap->n;
24567877ebaSShri Abhyankar   PetscInt       nz,rnz,i,j;
246dfbe8321SBarry Smith   PetscErrorCode ierr;
247c1490034SHong Zhang   PetscInt       *row,*col;
24816ebf90aSShri Abhyankar   Mat_SeqAIJ     *aa=(Mat_SeqAIJ*)A->data;
249397b6df1SKris Buschelman 
250397b6df1SKris Buschelman   PetscFunctionBegin;
25116ebf90aSShri Abhyankar   *v=aa->a;
252bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
2532205254eSKarl Rupp     nz   = aa->nz;
2542205254eSKarl Rupp     ai   = aa->i;
2552205254eSKarl Rupp     aj   = aa->j;
25616ebf90aSShri Abhyankar     *nnz = nz;
257785e854fSJed Brown     ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr);
258185f6596SHong Zhang     col  = row + nz;
259185f6596SHong Zhang 
26016ebf90aSShri Abhyankar     nz = 0;
26116ebf90aSShri Abhyankar     for (i=0; i<M; i++) {
26216ebf90aSShri Abhyankar       rnz = ai[i+1] - ai[i];
26367877ebaSShri Abhyankar       ajj = aj + ai[i];
26467877ebaSShri Abhyankar       for (j=0; j<rnz; j++) {
26567877ebaSShri Abhyankar         row[nz] = i+shift; col[nz++] = ajj[j] + shift;
26616ebf90aSShri Abhyankar       }
26716ebf90aSShri Abhyankar     }
26816ebf90aSShri Abhyankar     *r = row; *c = col;
26916ebf90aSShri Abhyankar   }
27016ebf90aSShri Abhyankar   PetscFunctionReturn(0);
27116ebf90aSShri Abhyankar }
272397b6df1SKris Buschelman 
2737ee00b23SStefano Zampini PetscErrorCode MatConvertToTriples_seqsell_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
2747ee00b23SStefano Zampini {
2757ee00b23SStefano Zampini   Mat_SeqSELL *a=(Mat_SeqSELL*)A->data;
2767ee00b23SStefano Zampini   PetscInt    *ptr;
2777ee00b23SStefano Zampini 
2787ee00b23SStefano Zampini   PetscFunctionBegin;
2797ee00b23SStefano Zampini   *v = a->val;
2807ee00b23SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
2817ee00b23SStefano Zampini     PetscInt       nz,i,j,row;
2827ee00b23SStefano Zampini     PetscErrorCode ierr;
2837ee00b23SStefano Zampini 
2847ee00b23SStefano Zampini     nz   = a->sliidx[a->totalslices];
2857ee00b23SStefano Zampini     *nnz = nz;
2867ee00b23SStefano Zampini     ierr = PetscMalloc1(2*nz, &ptr);CHKERRQ(ierr);
2877ee00b23SStefano Zampini     *r   = ptr;
2887ee00b23SStefano Zampini     *c   = ptr + nz;
2897ee00b23SStefano Zampini 
2907ee00b23SStefano Zampini     for (i=0; i<a->totalslices; i++) {
2917ee00b23SStefano Zampini       for (j=a->sliidx[i],row=0; j<a->sliidx[i+1]; j++,row=((row+1)&0x07)) {
2927ee00b23SStefano Zampini         *ptr++ = 8*i + row + shift;
2937ee00b23SStefano Zampini       }
2947ee00b23SStefano Zampini     }
2957ee00b23SStefano Zampini     for (i=0;i<nz;i++) *ptr++ = a->colidx[i] + shift;
2967ee00b23SStefano Zampini   }
2977ee00b23SStefano Zampini   PetscFunctionReturn(0);
2987ee00b23SStefano Zampini }
2997ee00b23SStefano Zampini 
300bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqbaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
30167877ebaSShri Abhyankar {
30267877ebaSShri Abhyankar   Mat_SeqBAIJ    *aa=(Mat_SeqBAIJ*)A->data;
30333d57670SJed Brown   const PetscInt *ai,*aj,*ajj,bs2 = aa->bs2;
30433d57670SJed Brown   PetscInt       bs,M,nz,idx=0,rnz,i,j,k,m;
30567877ebaSShri Abhyankar   PetscErrorCode ierr;
30667877ebaSShri Abhyankar   PetscInt       *row,*col;
30767877ebaSShri Abhyankar 
30867877ebaSShri Abhyankar   PetscFunctionBegin;
30933d57670SJed Brown   ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr);
31033d57670SJed Brown   M = A->rmap->N/bs;
311cf3759fdSShri Abhyankar   *v = aa->a;
312bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
313cf3759fdSShri Abhyankar     ai   = aa->i; aj = aa->j;
31467877ebaSShri Abhyankar     nz   = bs2*aa->nz;
31567877ebaSShri Abhyankar     *nnz = nz;
316785e854fSJed Brown     ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr);
317185f6596SHong Zhang     col  = row + nz;
318185f6596SHong Zhang 
31967877ebaSShri Abhyankar     for (i=0; i<M; i++) {
32067877ebaSShri Abhyankar       ajj = aj + ai[i];
32167877ebaSShri Abhyankar       rnz = ai[i+1] - ai[i];
32267877ebaSShri Abhyankar       for (k=0; k<rnz; k++) {
32367877ebaSShri Abhyankar         for (j=0; j<bs; j++) {
32467877ebaSShri Abhyankar           for (m=0; m<bs; m++) {
32567877ebaSShri Abhyankar             row[idx]   = i*bs + m + shift;
326cf3759fdSShri Abhyankar             col[idx++] = bs*(ajj[k]) + j + shift;
32767877ebaSShri Abhyankar           }
32867877ebaSShri Abhyankar         }
32967877ebaSShri Abhyankar       }
33067877ebaSShri Abhyankar     }
331cf3759fdSShri Abhyankar     *r = row; *c = col;
33267877ebaSShri Abhyankar   }
33367877ebaSShri Abhyankar   PetscFunctionReturn(0);
33467877ebaSShri Abhyankar }
33567877ebaSShri Abhyankar 
336bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqsbaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
33716ebf90aSShri Abhyankar {
33867877ebaSShri Abhyankar   const PetscInt *ai, *aj,*ajj,M=A->rmap->n;
33967877ebaSShri Abhyankar   PetscInt       nz,rnz,i,j;
34016ebf90aSShri Abhyankar   PetscErrorCode ierr;
34116ebf90aSShri Abhyankar   PetscInt       *row,*col;
34216ebf90aSShri Abhyankar   Mat_SeqSBAIJ   *aa=(Mat_SeqSBAIJ*)A->data;
34316ebf90aSShri Abhyankar 
34416ebf90aSShri Abhyankar   PetscFunctionBegin;
345882afa5aSHong Zhang   *v = aa->a;
346bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
3472205254eSKarl Rupp     nz   = aa->nz;
3482205254eSKarl Rupp     ai   = aa->i;
3492205254eSKarl Rupp     aj   = aa->j;
3502205254eSKarl Rupp     *v   = aa->a;
35116ebf90aSShri Abhyankar     *nnz = nz;
352785e854fSJed Brown     ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr);
353185f6596SHong Zhang     col  = row + nz;
354185f6596SHong Zhang 
35516ebf90aSShri Abhyankar     nz = 0;
35616ebf90aSShri Abhyankar     for (i=0; i<M; i++) {
35716ebf90aSShri Abhyankar       rnz = ai[i+1] - ai[i];
35867877ebaSShri Abhyankar       ajj = aj + ai[i];
35967877ebaSShri Abhyankar       for (j=0; j<rnz; j++) {
36067877ebaSShri Abhyankar         row[nz] = i+shift; col[nz++] = ajj[j] + shift;
36116ebf90aSShri Abhyankar       }
36216ebf90aSShri Abhyankar     }
36316ebf90aSShri Abhyankar     *r = row; *c = col;
36416ebf90aSShri Abhyankar   }
36516ebf90aSShri Abhyankar   PetscFunctionReturn(0);
36616ebf90aSShri Abhyankar }
36716ebf90aSShri Abhyankar 
368bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
36916ebf90aSShri Abhyankar {
37067877ebaSShri Abhyankar   const PetscInt    *ai,*aj,*ajj,*adiag,M=A->rmap->n;
37167877ebaSShri Abhyankar   PetscInt          nz,rnz,i,j;
37267877ebaSShri Abhyankar   const PetscScalar *av,*v1;
37316ebf90aSShri Abhyankar   PetscScalar       *val;
37416ebf90aSShri Abhyankar   PetscErrorCode    ierr;
37516ebf90aSShri Abhyankar   PetscInt          *row,*col;
376829b1710SHong Zhang   Mat_SeqAIJ        *aa=(Mat_SeqAIJ*)A->data;
37729b521d4Sstefano_zampini   PetscBool         missing;
37816ebf90aSShri Abhyankar 
37916ebf90aSShri Abhyankar   PetscFunctionBegin;
38016ebf90aSShri Abhyankar   ai    = aa->i; aj = aa->j; av = aa->a;
38116ebf90aSShri Abhyankar   adiag = aa->diag;
38229b521d4Sstefano_zampini   ierr  = MatMissingDiagonal_SeqAIJ(A,&missing,&i);CHKERRQ(ierr);
383bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
3847ee00b23SStefano Zampini     /* count nz in the upper triangular part of A */
385829b1710SHong Zhang     nz = 0;
38629b521d4Sstefano_zampini     if (missing) {
38729b521d4Sstefano_zampini       for (i=0; i<M; i++) {
38829b521d4Sstefano_zampini         if (PetscUnlikely(adiag[i] >= ai[i+1])) {
38929b521d4Sstefano_zampini           for (j=ai[i];j<ai[i+1];j++) {
39029b521d4Sstefano_zampini             if (aj[j] < i) continue;
39129b521d4Sstefano_zampini             nz++;
39229b521d4Sstefano_zampini           }
39329b521d4Sstefano_zampini         } else {
39429b521d4Sstefano_zampini           nz += ai[i+1] - adiag[i];
39529b521d4Sstefano_zampini         }
39629b521d4Sstefano_zampini       }
39729b521d4Sstefano_zampini     } else {
398829b1710SHong Zhang       for (i=0; i<M; i++) nz += ai[i+1] - adiag[i];
39929b521d4Sstefano_zampini     }
40016ebf90aSShri Abhyankar     *nnz = nz;
401829b1710SHong Zhang 
402185f6596SHong Zhang     ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr);
403185f6596SHong Zhang     col  = row + nz;
404185f6596SHong Zhang     val  = (PetscScalar*)(col + nz);
405185f6596SHong Zhang 
40616ebf90aSShri Abhyankar     nz = 0;
40729b521d4Sstefano_zampini     if (missing) {
40829b521d4Sstefano_zampini       for (i=0; i<M; i++) {
40929b521d4Sstefano_zampini         if (PetscUnlikely(adiag[i] >= ai[i+1])) {
41029b521d4Sstefano_zampini           for (j=ai[i];j<ai[i+1];j++) {
41129b521d4Sstefano_zampini             if (aj[j] < i) continue;
41229b521d4Sstefano_zampini             row[nz] = i+shift;
41329b521d4Sstefano_zampini             col[nz] = aj[j]+shift;
41429b521d4Sstefano_zampini             val[nz] = av[j];
41529b521d4Sstefano_zampini             nz++;
41629b521d4Sstefano_zampini           }
41729b521d4Sstefano_zampini         } else {
41829b521d4Sstefano_zampini           rnz = ai[i+1] - adiag[i];
41929b521d4Sstefano_zampini           ajj = aj + adiag[i];
42029b521d4Sstefano_zampini           v1  = av + adiag[i];
42129b521d4Sstefano_zampini           for (j=0; j<rnz; j++) {
42229b521d4Sstefano_zampini             row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j];
42329b521d4Sstefano_zampini           }
42429b521d4Sstefano_zampini         }
42529b521d4Sstefano_zampini       }
42629b521d4Sstefano_zampini     } else {
42716ebf90aSShri Abhyankar       for (i=0; i<M; i++) {
42816ebf90aSShri Abhyankar         rnz = ai[i+1] - adiag[i];
42967877ebaSShri Abhyankar         ajj = aj + adiag[i];
430cf3759fdSShri Abhyankar         v1  = av + adiag[i];
43167877ebaSShri Abhyankar         for (j=0; j<rnz; j++) {
43267877ebaSShri Abhyankar           row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j];
43316ebf90aSShri Abhyankar         }
43416ebf90aSShri Abhyankar       }
43529b521d4Sstefano_zampini     }
43616ebf90aSShri Abhyankar     *r = row; *c = col; *v = val;
437397b6df1SKris Buschelman   } else {
43816ebf90aSShri Abhyankar     nz = 0; val = *v;
43929b521d4Sstefano_zampini     if (missing) {
44016ebf90aSShri Abhyankar       for (i=0; i <M; i++) {
44129b521d4Sstefano_zampini         if (PetscUnlikely(adiag[i] >= ai[i+1])) {
44229b521d4Sstefano_zampini           for (j=ai[i];j<ai[i+1];j++) {
44329b521d4Sstefano_zampini             if (aj[j] < i) continue;
44429b521d4Sstefano_zampini             val[nz++] = av[j];
44529b521d4Sstefano_zampini           }
44629b521d4Sstefano_zampini         } else {
44716ebf90aSShri Abhyankar           rnz = ai[i+1] - adiag[i];
44867877ebaSShri Abhyankar           v1  = av + adiag[i];
44967877ebaSShri Abhyankar           for (j=0; j<rnz; j++) {
45067877ebaSShri Abhyankar             val[nz++] = v1[j];
45116ebf90aSShri Abhyankar           }
45216ebf90aSShri Abhyankar         }
45316ebf90aSShri Abhyankar       }
45429b521d4Sstefano_zampini     } else {
45516ebf90aSShri Abhyankar       for (i=0; i <M; i++) {
45616ebf90aSShri Abhyankar         rnz = ai[i+1] - adiag[i];
45716ebf90aSShri Abhyankar         v1  = av + adiag[i];
45816ebf90aSShri Abhyankar         for (j=0; j<rnz; j++) {
45916ebf90aSShri Abhyankar           val[nz++] = v1[j];
46016ebf90aSShri Abhyankar         }
46116ebf90aSShri Abhyankar       }
46216ebf90aSShri Abhyankar     }
46329b521d4Sstefano_zampini   }
46416ebf90aSShri Abhyankar   PetscFunctionReturn(0);
46516ebf90aSShri Abhyankar }
46616ebf90aSShri Abhyankar 
467bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpisbaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
46816ebf90aSShri Abhyankar {
46916ebf90aSShri Abhyankar   const PetscInt    *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj;
47016ebf90aSShri Abhyankar   PetscErrorCode    ierr;
47116ebf90aSShri Abhyankar   PetscInt          rstart,nz,i,j,jj,irow,countA,countB;
47216ebf90aSShri Abhyankar   PetscInt          *row,*col;
47316ebf90aSShri Abhyankar   const PetscScalar *av, *bv,*v1,*v2;
47416ebf90aSShri Abhyankar   PetscScalar       *val;
475397b6df1SKris Buschelman   Mat_MPISBAIJ      *mat = (Mat_MPISBAIJ*)A->data;
476397b6df1SKris Buschelman   Mat_SeqSBAIJ      *aa  = (Mat_SeqSBAIJ*)(mat->A)->data;
477397b6df1SKris Buschelman   Mat_SeqBAIJ       *bb  = (Mat_SeqBAIJ*)(mat->B)->data;
47816ebf90aSShri Abhyankar 
47916ebf90aSShri Abhyankar   PetscFunctionBegin;
480d0f46423SBarry Smith   ai=aa->i; aj=aa->j; bi=bb->i; bj=bb->j; rstart= A->rmap->rstart;
481397b6df1SKris Buschelman   av=aa->a; bv=bb->a;
482397b6df1SKris Buschelman 
4832205254eSKarl Rupp   garray = mat->garray;
4842205254eSKarl Rupp 
485bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
48616ebf90aSShri Abhyankar     nz   = aa->nz + bb->nz;
48716ebf90aSShri Abhyankar     *nnz = nz;
488185f6596SHong Zhang     ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr);
489185f6596SHong Zhang     col  = row + nz;
490185f6596SHong Zhang     val  = (PetscScalar*)(col + nz);
491185f6596SHong Zhang 
492397b6df1SKris Buschelman     *r = row; *c = col; *v = val;
493397b6df1SKris Buschelman   } else {
494397b6df1SKris Buschelman     row = *r; col = *c; val = *v;
495397b6df1SKris Buschelman   }
496397b6df1SKris Buschelman 
497028e57e8SHong Zhang   jj = 0; irow = rstart;
498397b6df1SKris Buschelman   for (i=0; i<m; i++) {
499397b6df1SKris Buschelman     ajj    = aj + ai[i];                 /* ptr to the beginning of this row */
500397b6df1SKris Buschelman     countA = ai[i+1] - ai[i];
501397b6df1SKris Buschelman     countB = bi[i+1] - bi[i];
502397b6df1SKris Buschelman     bjj    = bj + bi[i];
50316ebf90aSShri Abhyankar     v1     = av + ai[i];
50416ebf90aSShri Abhyankar     v2     = bv + bi[i];
505397b6df1SKris Buschelman 
506397b6df1SKris Buschelman     /* A-part */
507397b6df1SKris Buschelman     for (j=0; j<countA; j++) {
508bccb9932SShri Abhyankar       if (reuse == MAT_INITIAL_MATRIX) {
509397b6df1SKris Buschelman         row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift;
510397b6df1SKris Buschelman       }
51116ebf90aSShri Abhyankar       val[jj++] = v1[j];
512397b6df1SKris Buschelman     }
51316ebf90aSShri Abhyankar 
51416ebf90aSShri Abhyankar     /* B-part */
51516ebf90aSShri Abhyankar     for (j=0; j < countB; j++) {
516bccb9932SShri Abhyankar       if (reuse == MAT_INITIAL_MATRIX) {
517397b6df1SKris Buschelman         row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift;
518397b6df1SKris Buschelman       }
51916ebf90aSShri Abhyankar       val[jj++] = v2[j];
52016ebf90aSShri Abhyankar     }
52116ebf90aSShri Abhyankar     irow++;
52216ebf90aSShri Abhyankar   }
52316ebf90aSShri Abhyankar   PetscFunctionReturn(0);
52416ebf90aSShri Abhyankar }
52516ebf90aSShri Abhyankar 
526bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
52716ebf90aSShri Abhyankar {
52816ebf90aSShri Abhyankar   const PetscInt    *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj;
52916ebf90aSShri Abhyankar   PetscErrorCode    ierr;
53016ebf90aSShri Abhyankar   PetscInt          rstart,nz,i,j,jj,irow,countA,countB;
53116ebf90aSShri Abhyankar   PetscInt          *row,*col;
53216ebf90aSShri Abhyankar   const PetscScalar *av, *bv,*v1,*v2;
53316ebf90aSShri Abhyankar   PetscScalar       *val;
53416ebf90aSShri Abhyankar   Mat_MPIAIJ        *mat = (Mat_MPIAIJ*)A->data;
53516ebf90aSShri Abhyankar   Mat_SeqAIJ        *aa  = (Mat_SeqAIJ*)(mat->A)->data;
53616ebf90aSShri Abhyankar   Mat_SeqAIJ        *bb  = (Mat_SeqAIJ*)(mat->B)->data;
53716ebf90aSShri Abhyankar 
53816ebf90aSShri Abhyankar   PetscFunctionBegin;
53916ebf90aSShri Abhyankar   ai=aa->i; aj=aa->j; bi=bb->i; bj=bb->j; rstart= A->rmap->rstart;
54016ebf90aSShri Abhyankar   av=aa->a; bv=bb->a;
54116ebf90aSShri Abhyankar 
5422205254eSKarl Rupp   garray = mat->garray;
5432205254eSKarl Rupp 
544bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
54516ebf90aSShri Abhyankar     nz   = aa->nz + bb->nz;
54616ebf90aSShri Abhyankar     *nnz = nz;
547185f6596SHong Zhang     ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr);
548185f6596SHong Zhang     col  = row + nz;
549185f6596SHong Zhang     val  = (PetscScalar*)(col + nz);
550185f6596SHong Zhang 
55116ebf90aSShri Abhyankar     *r = row; *c = col; *v = val;
55216ebf90aSShri Abhyankar   } else {
55316ebf90aSShri Abhyankar     row = *r; col = *c; val = *v;
55416ebf90aSShri Abhyankar   }
55516ebf90aSShri Abhyankar 
55616ebf90aSShri Abhyankar   jj = 0; irow = rstart;
55716ebf90aSShri Abhyankar   for (i=0; i<m; i++) {
55816ebf90aSShri Abhyankar     ajj    = aj + ai[i];                 /* ptr to the beginning of this row */
55916ebf90aSShri Abhyankar     countA = ai[i+1] - ai[i];
56016ebf90aSShri Abhyankar     countB = bi[i+1] - bi[i];
56116ebf90aSShri Abhyankar     bjj    = bj + bi[i];
56216ebf90aSShri Abhyankar     v1     = av + ai[i];
56316ebf90aSShri Abhyankar     v2     = bv + bi[i];
56416ebf90aSShri Abhyankar 
56516ebf90aSShri Abhyankar     /* A-part */
56616ebf90aSShri Abhyankar     for (j=0; j<countA; j++) {
567bccb9932SShri Abhyankar       if (reuse == MAT_INITIAL_MATRIX) {
56816ebf90aSShri Abhyankar         row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift;
56916ebf90aSShri Abhyankar       }
57016ebf90aSShri Abhyankar       val[jj++] = v1[j];
57116ebf90aSShri Abhyankar     }
57216ebf90aSShri Abhyankar 
57316ebf90aSShri Abhyankar     /* B-part */
57416ebf90aSShri Abhyankar     for (j=0; j < countB; j++) {
575bccb9932SShri Abhyankar       if (reuse == MAT_INITIAL_MATRIX) {
57616ebf90aSShri Abhyankar         row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift;
57716ebf90aSShri Abhyankar       }
57816ebf90aSShri Abhyankar       val[jj++] = v2[j];
57916ebf90aSShri Abhyankar     }
58016ebf90aSShri Abhyankar     irow++;
58116ebf90aSShri Abhyankar   }
58216ebf90aSShri Abhyankar   PetscFunctionReturn(0);
58316ebf90aSShri Abhyankar }
58416ebf90aSShri Abhyankar 
585bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpibaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
58667877ebaSShri Abhyankar {
58767877ebaSShri Abhyankar   Mat_MPIBAIJ       *mat    = (Mat_MPIBAIJ*)A->data;
58867877ebaSShri Abhyankar   Mat_SeqBAIJ       *aa     = (Mat_SeqBAIJ*)(mat->A)->data;
58967877ebaSShri Abhyankar   Mat_SeqBAIJ       *bb     = (Mat_SeqBAIJ*)(mat->B)->data;
59067877ebaSShri Abhyankar   const PetscInt    *ai     = aa->i, *bi = bb->i, *aj = aa->j, *bj = bb->j,*ajj, *bjj;
591d985c460SShri Abhyankar   const PetscInt    *garray = mat->garray,mbs=mat->mbs,rstart=A->rmap->rstart;
59233d57670SJed Brown   const PetscInt    bs2=mat->bs2;
59367877ebaSShri Abhyankar   PetscErrorCode    ierr;
59433d57670SJed Brown   PetscInt          bs,nz,i,j,k,n,jj,irow,countA,countB,idx;
59567877ebaSShri Abhyankar   PetscInt          *row,*col;
59667877ebaSShri Abhyankar   const PetscScalar *av=aa->a, *bv=bb->a,*v1,*v2;
59767877ebaSShri Abhyankar   PetscScalar       *val;
59867877ebaSShri Abhyankar 
59967877ebaSShri Abhyankar   PetscFunctionBegin;
60033d57670SJed Brown   ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr);
601bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
60267877ebaSShri Abhyankar     nz   = bs2*(aa->nz + bb->nz);
60367877ebaSShri Abhyankar     *nnz = nz;
604185f6596SHong Zhang     ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr);
605185f6596SHong Zhang     col  = row + nz;
606185f6596SHong Zhang     val  = (PetscScalar*)(col + nz);
607185f6596SHong Zhang 
60867877ebaSShri Abhyankar     *r = row; *c = col; *v = val;
60967877ebaSShri Abhyankar   } else {
61067877ebaSShri Abhyankar     row = *r; col = *c; val = *v;
61167877ebaSShri Abhyankar   }
61267877ebaSShri Abhyankar 
613d985c460SShri Abhyankar   jj = 0; irow = rstart;
61467877ebaSShri Abhyankar   for (i=0; i<mbs; i++) {
61567877ebaSShri Abhyankar     countA = ai[i+1] - ai[i];
61667877ebaSShri Abhyankar     countB = bi[i+1] - bi[i];
61767877ebaSShri Abhyankar     ajj    = aj + ai[i];
61867877ebaSShri Abhyankar     bjj    = bj + bi[i];
61967877ebaSShri Abhyankar     v1     = av + bs2*ai[i];
62067877ebaSShri Abhyankar     v2     = bv + bs2*bi[i];
62167877ebaSShri Abhyankar 
62267877ebaSShri Abhyankar     idx = 0;
62367877ebaSShri Abhyankar     /* A-part */
62467877ebaSShri Abhyankar     for (k=0; k<countA; k++) {
62567877ebaSShri Abhyankar       for (j=0; j<bs; j++) {
62667877ebaSShri Abhyankar         for (n=0; n<bs; n++) {
627bccb9932SShri Abhyankar           if (reuse == MAT_INITIAL_MATRIX) {
628d985c460SShri Abhyankar             row[jj] = irow + n + shift;
629d985c460SShri Abhyankar             col[jj] = rstart + bs*ajj[k] + j + shift;
63067877ebaSShri Abhyankar           }
63167877ebaSShri Abhyankar           val[jj++] = v1[idx++];
63267877ebaSShri Abhyankar         }
63367877ebaSShri Abhyankar       }
63467877ebaSShri Abhyankar     }
63567877ebaSShri Abhyankar 
63667877ebaSShri Abhyankar     idx = 0;
63767877ebaSShri Abhyankar     /* B-part */
63867877ebaSShri Abhyankar     for (k=0; k<countB; k++) {
63967877ebaSShri Abhyankar       for (j=0; j<bs; j++) {
64067877ebaSShri Abhyankar         for (n=0; n<bs; n++) {
641bccb9932SShri Abhyankar           if (reuse == MAT_INITIAL_MATRIX) {
642d985c460SShri Abhyankar             row[jj] = irow + n + shift;
643d985c460SShri Abhyankar             col[jj] = bs*garray[bjj[k]] + j + shift;
64467877ebaSShri Abhyankar           }
645d985c460SShri Abhyankar           val[jj++] = v2[idx++];
64667877ebaSShri Abhyankar         }
64767877ebaSShri Abhyankar       }
64867877ebaSShri Abhyankar     }
649d985c460SShri Abhyankar     irow += bs;
65067877ebaSShri Abhyankar   }
65167877ebaSShri Abhyankar   PetscFunctionReturn(0);
65267877ebaSShri Abhyankar }
65367877ebaSShri Abhyankar 
654bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
65516ebf90aSShri Abhyankar {
65616ebf90aSShri Abhyankar   const PetscInt    *ai, *aj,*adiag, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj;
65716ebf90aSShri Abhyankar   PetscErrorCode    ierr;
658e0bace9bSHong Zhang   PetscInt          rstart,nz,nza,nzb,i,j,jj,irow,countA,countB;
65916ebf90aSShri Abhyankar   PetscInt          *row,*col;
66016ebf90aSShri Abhyankar   const PetscScalar *av, *bv,*v1,*v2;
66116ebf90aSShri Abhyankar   PetscScalar       *val;
66216ebf90aSShri Abhyankar   Mat_MPIAIJ        *mat =  (Mat_MPIAIJ*)A->data;
66316ebf90aSShri Abhyankar   Mat_SeqAIJ        *aa  =(Mat_SeqAIJ*)(mat->A)->data;
66416ebf90aSShri Abhyankar   Mat_SeqAIJ        *bb  =(Mat_SeqAIJ*)(mat->B)->data;
66516ebf90aSShri Abhyankar 
66616ebf90aSShri Abhyankar   PetscFunctionBegin;
66716ebf90aSShri Abhyankar   ai=aa->i; aj=aa->j; adiag=aa->diag;
66816ebf90aSShri Abhyankar   bi=bb->i; bj=bb->j; garray = mat->garray;
66916ebf90aSShri Abhyankar   av=aa->a; bv=bb->a;
6702205254eSKarl Rupp 
67116ebf90aSShri Abhyankar   rstart = A->rmap->rstart;
67216ebf90aSShri Abhyankar 
673bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
674e0bace9bSHong Zhang     nza = 0;    /* num of upper triangular entries in mat->A, including diagonals */
675e0bace9bSHong Zhang     nzb = 0;    /* num of upper triangular entries in mat->B */
67616ebf90aSShri Abhyankar     for (i=0; i<m; i++) {
677e0bace9bSHong Zhang       nza   += (ai[i+1] - adiag[i]);
67816ebf90aSShri Abhyankar       countB = bi[i+1] - bi[i];
67916ebf90aSShri Abhyankar       bjj    = bj + bi[i];
680e0bace9bSHong Zhang       for (j=0; j<countB; j++) {
681e0bace9bSHong Zhang         if (garray[bjj[j]] > rstart) nzb++;
682e0bace9bSHong Zhang       }
683e0bace9bSHong Zhang     }
68416ebf90aSShri Abhyankar 
685e0bace9bSHong Zhang     nz   = nza + nzb; /* total nz of upper triangular part of mat */
68616ebf90aSShri Abhyankar     *nnz = nz;
687185f6596SHong Zhang     ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr);
688185f6596SHong Zhang     col  = row + nz;
689185f6596SHong Zhang     val  = (PetscScalar*)(col + nz);
690185f6596SHong Zhang 
69116ebf90aSShri Abhyankar     *r = row; *c = col; *v = val;
69216ebf90aSShri Abhyankar   } else {
69316ebf90aSShri Abhyankar     row = *r; col = *c; val = *v;
69416ebf90aSShri Abhyankar   }
69516ebf90aSShri Abhyankar 
69616ebf90aSShri Abhyankar   jj = 0; irow = rstart;
69716ebf90aSShri Abhyankar   for (i=0; i<m; i++) {
69816ebf90aSShri Abhyankar     ajj    = aj + adiag[i];                 /* ptr to the beginning of the diagonal of this row */
69916ebf90aSShri Abhyankar     v1     = av + adiag[i];
70016ebf90aSShri Abhyankar     countA = ai[i+1] - adiag[i];
70116ebf90aSShri Abhyankar     countB = bi[i+1] - bi[i];
70216ebf90aSShri Abhyankar     bjj    = bj + bi[i];
70316ebf90aSShri Abhyankar     v2     = bv + bi[i];
70416ebf90aSShri Abhyankar 
70516ebf90aSShri Abhyankar     /* A-part */
70616ebf90aSShri Abhyankar     for (j=0; j<countA; j++) {
707bccb9932SShri Abhyankar       if (reuse == MAT_INITIAL_MATRIX) {
70816ebf90aSShri Abhyankar         row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift;
70916ebf90aSShri Abhyankar       }
71016ebf90aSShri Abhyankar       val[jj++] = v1[j];
71116ebf90aSShri Abhyankar     }
71216ebf90aSShri Abhyankar 
71316ebf90aSShri Abhyankar     /* B-part */
71416ebf90aSShri Abhyankar     for (j=0; j < countB; j++) {
71516ebf90aSShri Abhyankar       if (garray[bjj[j]] > rstart) {
716bccb9932SShri Abhyankar         if (reuse == MAT_INITIAL_MATRIX) {
71716ebf90aSShri Abhyankar           row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift;
71816ebf90aSShri Abhyankar         }
71916ebf90aSShri Abhyankar         val[jj++] = v2[j];
72016ebf90aSShri Abhyankar       }
721397b6df1SKris Buschelman     }
722397b6df1SKris Buschelman     irow++;
723397b6df1SKris Buschelman   }
724397b6df1SKris Buschelman   PetscFunctionReturn(0);
725397b6df1SKris Buschelman }
726397b6df1SKris Buschelman 
727dfbe8321SBarry Smith PetscErrorCode MatDestroy_MUMPS(Mat A)
728dfbe8321SBarry Smith {
729e69c285eSBarry Smith   Mat_MUMPS      *mumps=(Mat_MUMPS*)A->data;
730dfbe8321SBarry Smith   PetscErrorCode ierr;
731b24902e0SBarry Smith 
732397b6df1SKris Buschelman   PetscFunctionBegin;
733a5e57a09SHong Zhang   ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr);
734a5e57a09SHong Zhang   ierr = VecScatterDestroy(&mumps->scat_rhs);CHKERRQ(ierr);
735a5e57a09SHong Zhang   ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr);
736801fbe65SHong Zhang   ierr = VecDestroy(&mumps->b_seq);CHKERRQ(ierr);
737a5e57a09SHong Zhang   ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr);
738a5e57a09SHong Zhang   ierr = PetscFree(mumps->id.perm_in);CHKERRQ(ierr);
739a5e57a09SHong Zhang   ierr = PetscFree(mumps->irn);CHKERRQ(ierr);
740b34f08ffSHong Zhang   ierr = PetscFree(mumps->info);CHKERRQ(ierr);
74159ac8732SStefano Zampini   ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr);
742a5e57a09SHong Zhang   mumps->id.job = JOB_END;
7433ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
7443ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT)
7453ab56b82SJunchao Zhang   if (mumps->use_petsc_omp_support) { ierr = PetscOmpCtrlDestroy(&mumps->omp_ctrl);CHKERRQ(ierr); }
7463ab56b82SJunchao Zhang #endif
7473ab56b82SJunchao Zhang   ierr = PetscFree2(mumps->recvcount,mumps->displs);CHKERRQ(ierr);
748e69c285eSBarry Smith   ierr = PetscFree(A->data);CHKERRQ(ierr);
749bf0cc555SLisandro Dalcin 
75097969023SHong Zhang   /* clear composed functions */
7513ca39a21SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr);
7525a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSetSchurIS_C",NULL);CHKERRQ(ierr);
7535a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorCreateSchurComplement_C",NULL);CHKERRQ(ierr);
754bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetIcntl_C",NULL);CHKERRQ(ierr);
755bc6112feSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetIcntl_C",NULL);CHKERRQ(ierr);
756bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetCntl_C",NULL);CHKERRQ(ierr);
757bc6112feSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetCntl_C",NULL);CHKERRQ(ierr);
758ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfo_C",NULL);CHKERRQ(ierr);
759ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfog_C",NULL);CHKERRQ(ierr);
760ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfo_C",NULL);CHKERRQ(ierr);
761ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfog_C",NULL);CHKERRQ(ierr);
76289a9c03aSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverse_C",NULL);CHKERRQ(ierr);
7630e6b8875SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverseTranspose_C",NULL);CHKERRQ(ierr);
764397b6df1SKris Buschelman   PetscFunctionReturn(0);
765397b6df1SKris Buschelman }
766397b6df1SKris Buschelman 
767b24902e0SBarry Smith PetscErrorCode MatSolve_MUMPS(Mat A,Vec b,Vec x)
768b24902e0SBarry Smith {
769e69c285eSBarry Smith   Mat_MUMPS        *mumps=(Mat_MUMPS*)A->data;
770d54de34fSKris Buschelman   PetscScalar      *array;
77167877ebaSShri Abhyankar   Vec              b_seq;
772329ec9b3SHong Zhang   IS               is_iden,is_petsc;
773dfbe8321SBarry Smith   PetscErrorCode   ierr;
774329ec9b3SHong Zhang   PetscInt         i;
775cc86f929SStefano Zampini   PetscBool        second_solve = PETSC_FALSE;
776883f2eb9SBarry Smith   static PetscBool cite1 = PETSC_FALSE,cite2 = PETSC_FALSE;
777397b6df1SKris Buschelman 
778397b6df1SKris Buschelman   PetscFunctionBegin;
779883f2eb9SBarry Smith   ierr = PetscCitationsRegister("@article{MUMPS01,\n  author = {P.~R. Amestoy and I.~S. Duff and J.-Y. L'Excellent and J. Koster},\n  title = {A fully asynchronous multifrontal solver using distributed dynamic scheduling},\n  journal = {SIAM Journal on Matrix Analysis and Applications},\n  volume = {23},\n  number = {1},\n  pages = {15--41},\n  year = {2001}\n}\n",&cite1);CHKERRQ(ierr);
780883f2eb9SBarry Smith   ierr = PetscCitationsRegister("@article{MUMPS02,\n  author = {P.~R. Amestoy and A. Guermouche and J.-Y. L'Excellent and S. Pralet},\n  title = {Hybrid scheduling for the parallel solution of linear systems},\n  journal = {Parallel Computing},\n  volume = {32},\n  number = {2},\n  pages = {136--156},\n  year = {2006}\n}\n",&cite2);CHKERRQ(ierr);
7812aca8efcSHong Zhang 
782603e8f96SBarry Smith   if (A->factorerrortype) {
7832aca8efcSHong Zhang     ierr = PetscInfo2(A,"MatSolve is called with singular matrix factor, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
7842aca8efcSHong Zhang     ierr = VecSetInf(x);CHKERRQ(ierr);
7852aca8efcSHong Zhang     PetscFunctionReturn(0);
7862aca8efcSHong Zhang   }
7872aca8efcSHong Zhang 
788be818407SHong Zhang   mumps->id.ICNTL(20)= 0; /* dense RHS */
789a5e57a09SHong Zhang   mumps->id.nrhs     = 1;
790a5e57a09SHong Zhang   b_seq          = mumps->b_seq;
7912d4298aeSJunchao Zhang   if (mumps->petsc_size > 1) {
792329ec9b3SHong Zhang     /* MUMPS only supports centralized rhs. Scatter b into a seqential rhs vector */
793a5e57a09SHong Zhang     ierr = VecScatterBegin(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
794a5e57a09SHong Zhang     ierr = VecScatterEnd(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
795a5e57a09SHong Zhang     if (!mumps->myid) {ierr = VecGetArray(b_seq,&array);CHKERRQ(ierr);}
7963ab56b82SJunchao Zhang   } else {  /* petsc_size == 1 */
797397b6df1SKris Buschelman     ierr = VecCopy(b,x);CHKERRQ(ierr);
798397b6df1SKris Buschelman     ierr = VecGetArray(x,&array);CHKERRQ(ierr);
799397b6df1SKris Buschelman   }
800a5e57a09SHong Zhang   if (!mumps->myid) { /* define rhs on the host */
801a5e57a09SHong Zhang     mumps->id.nrhs = 1;
802940cd9d6SSatish Balay     mumps->id.rhs = (MumpsScalar*)array;
803397b6df1SKris Buschelman   }
804397b6df1SKris Buschelman 
805cc86f929SStefano Zampini   /*
806cc86f929SStefano Zampini      handle condensation step of Schur complement (if any)
807cc86f929SStefano Zampini      We set by default ICNTL(26) == -1 when Schur indices have been provided by the user.
808cc86f929SStefano Zampini      According to MUMPS (5.0.0) manual, any value should be harmful during the factorization phase
809cc86f929SStefano Zampini      Unless the user provides a valid value for ICNTL(26), MatSolve and MatMatSolve routines solve the full system.
810cc86f929SStefano Zampini      This requires an extra call to PetscMUMPS_c and the computation of the factors for S
811cc86f929SStefano Zampini   */
812583f777eSStefano Zampini   if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) {
8132d4298aeSJunchao Zhang     if (mumps->petsc_size > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n");
814cc86f929SStefano Zampini     second_solve = PETSC_TRUE;
815b3cb21ddSStefano Zampini     ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr);
816cc86f929SStefano Zampini   }
817397b6df1SKris Buschelman   /* solve phase */
818329ec9b3SHong Zhang   /*-------------*/
819a5e57a09SHong Zhang   mumps->id.job = JOB_SOLVE;
8203ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
821a5e57a09SHong Zhang   if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1));
822397b6df1SKris Buschelman 
823b5fa320bSStefano Zampini   /* handle expansion step of Schur complement (if any) */
824cc86f929SStefano Zampini   if (second_solve) {
825b3cb21ddSStefano Zampini     ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr);
826cc86f929SStefano Zampini   }
827b5fa320bSStefano Zampini 
8282d4298aeSJunchao Zhang   if (mumps->petsc_size > 1) { /* convert mumps distributed solution to petsc mpi x */
829a5e57a09SHong Zhang     if (mumps->scat_sol && mumps->ICNTL9_pre != mumps->id.ICNTL(9)) {
830a5e57a09SHong Zhang       /* when id.ICNTL(9) changes, the contents of lsol_loc may change (not its size, lsol_loc), recreates scat_sol */
831a5e57a09SHong Zhang       ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr);
832397b6df1SKris Buschelman     }
833a5e57a09SHong Zhang     if (!mumps->scat_sol) { /* create scatter scat_sol */
834a5e57a09SHong Zhang       ierr = ISCreateStride(PETSC_COMM_SELF,mumps->id.lsol_loc,0,1,&is_iden);CHKERRQ(ierr); /* from */
835a5e57a09SHong Zhang       for (i=0; i<mumps->id.lsol_loc; i++) {
836a5e57a09SHong Zhang         mumps->id.isol_loc[i] -= 1; /* change Fortran style to C style */
837a5e57a09SHong Zhang       }
838a5e57a09SHong Zhang       ierr = ISCreateGeneral(PETSC_COMM_SELF,mumps->id.lsol_loc,mumps->id.isol_loc,PETSC_COPY_VALUES,&is_petsc);CHKERRQ(ierr);  /* to */
839*35928de7SBarry Smith       ierr = VecScatterCreateWithData(mumps->x_seq,is_iden,x,is_petsc,&mumps->scat_sol);CHKERRQ(ierr);
8406bf464f9SBarry Smith       ierr = ISDestroy(&is_iden);CHKERRQ(ierr);
8416bf464f9SBarry Smith       ierr = ISDestroy(&is_petsc);CHKERRQ(ierr);
8422205254eSKarl Rupp 
843a5e57a09SHong Zhang       mumps->ICNTL9_pre = mumps->id.ICNTL(9); /* save current value of id.ICNTL(9) */
844397b6df1SKris Buschelman     }
845a5e57a09SHong Zhang 
846a5e57a09SHong Zhang     ierr = VecScatterBegin(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
847a5e57a09SHong Zhang     ierr = VecScatterEnd(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
848329ec9b3SHong Zhang   }
8499880c9b4SStefano Zampini   ierr = PetscLogFlops(2.0*mumps->id.RINFO(3));CHKERRQ(ierr);
850397b6df1SKris Buschelman   PetscFunctionReturn(0);
851397b6df1SKris Buschelman }
852397b6df1SKris Buschelman 
85351d5961aSHong Zhang PetscErrorCode MatSolveTranspose_MUMPS(Mat A,Vec b,Vec x)
85451d5961aSHong Zhang {
855e69c285eSBarry Smith   Mat_MUMPS      *mumps=(Mat_MUMPS*)A->data;
85651d5961aSHong Zhang   PetscErrorCode ierr;
85751d5961aSHong Zhang 
85851d5961aSHong Zhang   PetscFunctionBegin;
859a5e57a09SHong Zhang   mumps->id.ICNTL(9) = 0;
8600ad0caddSJed Brown   ierr = MatSolve_MUMPS(A,b,x);CHKERRQ(ierr);
861a5e57a09SHong Zhang   mumps->id.ICNTL(9) = 1;
86251d5961aSHong Zhang   PetscFunctionReturn(0);
86351d5961aSHong Zhang }
86451d5961aSHong Zhang 
865e0b74bf9SHong Zhang PetscErrorCode MatMatSolve_MUMPS(Mat A,Mat B,Mat X)
866e0b74bf9SHong Zhang {
867bda8bf91SBarry Smith   PetscErrorCode ierr;
868b8491c3eSStefano Zampini   Mat            Bt = NULL;
869b8491c3eSStefano Zampini   PetscBool      flg, flgT;
870e69c285eSBarry Smith   Mat_MUMPS      *mumps=(Mat_MUMPS*)A->data;
871334c5f61SHong Zhang   PetscInt       i,nrhs,M;
8722cd7d884SHong Zhang   PetscScalar    *array,*bray;
873be818407SHong Zhang   PetscInt       lsol_loc,nlsol_loc,*isol_loc,*idx,*iidx,*idxx,*isol_loc_save;
874be818407SHong Zhang   MumpsScalar    *sol_loc,*sol_loc_save;
875be818407SHong Zhang   IS             is_to,is_from;
876be818407SHong Zhang   PetscInt       k,proc,j,m;
877be818407SHong Zhang   const PetscInt *rstart;
878be818407SHong Zhang   Vec            v_mpi,b_seq,x_seq;
879be818407SHong Zhang   VecScatter     scat_rhs,scat_sol;
880be818407SHong Zhang   PetscScalar    *aa;
881be818407SHong Zhang   PetscInt       spnr,*ia,*ja;
882d56c302dSHong Zhang   Mat_MPIAIJ     *b = NULL;
883bda8bf91SBarry Smith 
884e0b74bf9SHong Zhang   PetscFunctionBegin;
885be818407SHong Zhang   ierr = PetscObjectTypeCompareAny((PetscObject)X,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr);
886be818407SHong Zhang   if (!flg) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_ARG_WRONG,"Matrix X must be MATDENSE matrix");
887be818407SHong Zhang 
8880298fd71SBarry Smith   ierr = PetscObjectTypeCompareAny((PetscObject)B,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr);
889be818407SHong Zhang   if (flg) { /* dense B */
890c0be3364SHong Zhang     if (B->rmap->n != X->rmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Matrix B and X must have same row distribution");
891be818407SHong Zhang     mumps->id.ICNTL(20)= 0; /* dense RHS */
8920e6b8875SHong Zhang   } else { /* sparse B */
893be818407SHong Zhang     ierr = PetscObjectTypeCompare((PetscObject)B,MATTRANSPOSEMAT,&flgT);CHKERRQ(ierr);
8940e6b8875SHong Zhang     if (flgT) { /* input B is transpose of actural RHS matrix,
8950e6b8875SHong Zhang                  because mumps requires sparse compressed COLUMN storage! See MatMatTransposeSolve_MUMPS() */
896be818407SHong Zhang       ierr = MatTransposeGetMat(B,&Bt);CHKERRQ(ierr);
8970f52d626SJunchao Zhang     } else SETERRQ(PetscObjectComm((PetscObject)B),PETSC_ERR_ARG_WRONG,"Matrix B must be MATTRANSPOSEMAT matrix");
898be818407SHong Zhang     mumps->id.ICNTL(20)= 1; /* sparse RHS */
899b8491c3eSStefano Zampini   }
90087b22cf4SHong Zhang 
9019481e6e9SHong Zhang   ierr = MatGetSize(B,&M,&nrhs);CHKERRQ(ierr);
9029481e6e9SHong Zhang   mumps->id.nrhs = nrhs;
9039481e6e9SHong Zhang   mumps->id.lrhs = M;
9042b691707SHong Zhang   mumps->id.rhs  = NULL;
9059481e6e9SHong Zhang 
9062d4298aeSJunchao Zhang   if (mumps->petsc_size == 1) {
907b8491c3eSStefano Zampini     PetscScalar *aa;
908b8491c3eSStefano Zampini     PetscInt    spnr,*ia,*ja;
909e94cce23SStefano Zampini     PetscBool   second_solve = PETSC_FALSE;
910b8491c3eSStefano Zampini 
9112cd7d884SHong Zhang     ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr);
912b8491c3eSStefano Zampini     mumps->id.rhs = (MumpsScalar*)array;
9132b691707SHong Zhang 
9142b691707SHong Zhang     if (!Bt) { /* dense B */
9152b691707SHong Zhang       /* copy B to X */
916b8491c3eSStefano Zampini       ierr = MatDenseGetArray(B,&bray);CHKERRQ(ierr);
9176444a565SStefano Zampini       ierr = PetscMemcpy(array,bray,M*nrhs*sizeof(PetscScalar));CHKERRQ(ierr);
9182cd7d884SHong Zhang       ierr = MatDenseRestoreArray(B,&bray);CHKERRQ(ierr);
9192b691707SHong Zhang     } else { /* sparse B */
920b8491c3eSStefano Zampini       ierr = MatSeqAIJGetArray(Bt,&aa);CHKERRQ(ierr);
921be818407SHong Zhang       ierr = MatGetRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr);
922c0be3364SHong Zhang       if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure");
9232b691707SHong Zhang       /* mumps requires ia and ja start at 1! */
924b8491c3eSStefano Zampini       mumps->id.irhs_ptr    = ia;
925b8491c3eSStefano Zampini       mumps->id.irhs_sparse = ja;
926b8491c3eSStefano Zampini       mumps->id.nz_rhs      = ia[spnr] - 1;
927b8491c3eSStefano Zampini       mumps->id.rhs_sparse  = (MumpsScalar*)aa;
928b8491c3eSStefano Zampini     }
929e94cce23SStefano Zampini     /* handle condensation step of Schur complement (if any) */
930583f777eSStefano Zampini     if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) {
931e94cce23SStefano Zampini       second_solve = PETSC_TRUE;
932b3cb21ddSStefano Zampini       ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr);
933e94cce23SStefano Zampini     }
9342cd7d884SHong Zhang     /* solve phase */
9352cd7d884SHong Zhang     /*-------------*/
9362cd7d884SHong Zhang     mumps->id.job = JOB_SOLVE;
9373ab56b82SJunchao Zhang     PetscMUMPS_c(mumps);
9382cd7d884SHong Zhang     if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1));
939b5fa320bSStefano Zampini 
940b5fa320bSStefano Zampini     /* handle expansion step of Schur complement (if any) */
941e94cce23SStefano Zampini     if (second_solve) {
942b3cb21ddSStefano Zampini       ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr);
943e94cce23SStefano Zampini     }
9442b691707SHong Zhang     if (Bt) { /* sparse B */
945b8491c3eSStefano Zampini       ierr = MatSeqAIJRestoreArray(Bt,&aa);CHKERRQ(ierr);
946be818407SHong Zhang       ierr = MatRestoreRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr);
947c0be3364SHong Zhang       if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure");
948b8491c3eSStefano Zampini     }
9492cd7d884SHong Zhang     ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr);
950be818407SHong Zhang     PetscFunctionReturn(0);
951be818407SHong Zhang   }
952801fbe65SHong Zhang 
953be818407SHong Zhang   /*--------- parallel case: MUMPS requires rhs B to be centralized on the host! --------*/
9542d4298aeSJunchao Zhang   if (mumps->petsc_size > 1 && mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n");
955241dbb5eSStefano Zampini 
956be818407SHong Zhang   /* create x_seq to hold mumps local solution */
95771aed81dSHong Zhang   isol_loc_save = mumps->id.isol_loc; /* save it for MatSovle() */
95871aed81dSHong Zhang   sol_loc_save  = mumps->id.sol_loc;
959801fbe65SHong Zhang 
960a1dfcbd9SJunchao Zhang   lsol_loc  = mumps->id.lsol_loc;
96171aed81dSHong Zhang   nlsol_loc = nrhs*lsol_loc;     /* length of sol_loc */
962a1dfcbd9SJunchao Zhang   ierr = PetscMalloc2(nlsol_loc,&sol_loc,lsol_loc,&isol_loc);CHKERRQ(ierr);
963940cd9d6SSatish Balay   mumps->id.sol_loc  = (MumpsScalar*)sol_loc;
964801fbe65SHong Zhang   mumps->id.isol_loc = isol_loc;
965801fbe65SHong Zhang 
9661070efccSSatish Balay   ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,nlsol_loc,(PetscScalar*)sol_loc,&x_seq);CHKERRQ(ierr);
9672cd7d884SHong Zhang 
968334c5f61SHong Zhang   /* scatter v_mpi to b_seq because MUMPS only supports centralized rhs */
96974f0fcc7SHong Zhang   /* idx: maps from k-th index of v_mpi to (i,j)-th global entry of B;
9702b691707SHong Zhang      iidx: inverse of idx, will be used by scattering mumps x_seq -> petsc X */
971be818407SHong Zhang   ierr = PetscMalloc1(nrhs*M,&idx);CHKERRQ(ierr);
9722cd7d884SHong Zhang 
9732b691707SHong Zhang   if (!Bt) { /* dense B */
974be818407SHong Zhang     /* wrap dense rhs matrix B into a vector v_mpi */
9752b691707SHong Zhang     ierr = MatGetLocalSize(B,&m,NULL);CHKERRQ(ierr);
9762b691707SHong Zhang     ierr = MatDenseGetArray(B,&bray);CHKERRQ(ierr);
9772b691707SHong Zhang     ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)B),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr);
9782b691707SHong Zhang     ierr = MatDenseRestoreArray(B,&bray);CHKERRQ(ierr);
9792b691707SHong Zhang 
980be818407SHong Zhang     /* scatter v_mpi to b_seq in proc[0]. MUMPS requires rhs to be centralized on the host! */
981801fbe65SHong Zhang     if (!mumps->myid) {
982be818407SHong Zhang       ierr = MatGetOwnershipRanges(B,&rstart);CHKERRQ(ierr);
983be818407SHong Zhang       k = 0;
9842d4298aeSJunchao Zhang       for (proc=0; proc<mumps->petsc_size; proc++){
985be818407SHong Zhang         for (j=0; j<nrhs; j++){
986be818407SHong Zhang           for (i=rstart[proc]; i<rstart[proc+1]; i++){
987be818407SHong Zhang             idx[k++]      = j*M + i;
988be818407SHong Zhang           }
989be818407SHong Zhang         }
990be818407SHong Zhang       }
991be818407SHong Zhang 
992334c5f61SHong Zhang       ierr = VecCreateSeq(PETSC_COMM_SELF,nrhs*M,&b_seq);CHKERRQ(ierr);
993801fbe65SHong Zhang       ierr = ISCreateGeneral(PETSC_COMM_SELF,nrhs*M,idx,PETSC_COPY_VALUES,&is_to);CHKERRQ(ierr);
994801fbe65SHong Zhang       ierr = ISCreateStride(PETSC_COMM_SELF,nrhs*M,0,1,&is_from);CHKERRQ(ierr);
995801fbe65SHong Zhang     } else {
996334c5f61SHong Zhang       ierr = VecCreateSeq(PETSC_COMM_SELF,0,&b_seq);CHKERRQ(ierr);
997801fbe65SHong Zhang       ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_to);CHKERRQ(ierr);
998801fbe65SHong Zhang       ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_from);CHKERRQ(ierr);
999801fbe65SHong Zhang     }
1000*35928de7SBarry Smith     ierr = VecScatterCreateWithData(v_mpi,is_from,b_seq,is_to,&scat_rhs);CHKERRQ(ierr);
1001334c5f61SHong Zhang     ierr = VecScatterBegin(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1002801fbe65SHong Zhang     ierr = ISDestroy(&is_to);CHKERRQ(ierr);
1003801fbe65SHong Zhang     ierr = ISDestroy(&is_from);CHKERRQ(ierr);
1004334c5f61SHong Zhang     ierr = VecScatterEnd(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1005801fbe65SHong Zhang 
1006801fbe65SHong Zhang     if (!mumps->myid) { /* define rhs on the host */
1007334c5f61SHong Zhang       ierr = VecGetArray(b_seq,&bray);CHKERRQ(ierr);
1008940cd9d6SSatish Balay       mumps->id.rhs = (MumpsScalar*)bray;
1009334c5f61SHong Zhang       ierr = VecRestoreArray(b_seq,&bray);CHKERRQ(ierr);
1010801fbe65SHong Zhang     }
1011801fbe65SHong Zhang 
10122b691707SHong Zhang   } else { /* sparse B */
10132b691707SHong Zhang     b = (Mat_MPIAIJ*)Bt->data;
10142b691707SHong Zhang 
1015be818407SHong Zhang     /* wrap dense X into a vector v_mpi */
10162b691707SHong Zhang     ierr = MatGetLocalSize(X,&m,NULL);CHKERRQ(ierr);
10172b691707SHong Zhang     ierr = MatDenseGetArray(X,&bray);CHKERRQ(ierr);
10182b691707SHong Zhang     ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)X),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr);
10192b691707SHong Zhang     ierr = MatDenseRestoreArray(X,&bray);CHKERRQ(ierr);
10202b691707SHong Zhang 
10212b691707SHong Zhang     if (!mumps->myid) {
10222b691707SHong Zhang       ierr = MatSeqAIJGetArray(b->A,&aa);CHKERRQ(ierr);
1023be818407SHong Zhang       ierr = MatGetRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr);
1024c0be3364SHong Zhang       if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure");
10252b691707SHong Zhang       /* mumps requires ia and ja start at 1! */
10262b691707SHong Zhang       mumps->id.irhs_ptr    = ia;
10272b691707SHong Zhang       mumps->id.irhs_sparse = ja;
10282b691707SHong Zhang       mumps->id.nz_rhs      = ia[spnr] - 1;
10292b691707SHong Zhang       mumps->id.rhs_sparse  = (MumpsScalar*)aa;
10302b691707SHong Zhang     } else {
10312b691707SHong Zhang       mumps->id.irhs_ptr    = NULL;
10322b691707SHong Zhang       mumps->id.irhs_sparse = NULL;
10332b691707SHong Zhang       mumps->id.nz_rhs      = 0;
10342b691707SHong Zhang       mumps->id.rhs_sparse  = NULL;
10352b691707SHong Zhang     }
10362b691707SHong Zhang   }
10372b691707SHong Zhang 
1038801fbe65SHong Zhang   /* solve phase */
1039801fbe65SHong Zhang   /*-------------*/
1040801fbe65SHong Zhang   mumps->id.job = JOB_SOLVE;
10413ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
1042801fbe65SHong Zhang   if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1));
1043801fbe65SHong Zhang 
1044334c5f61SHong Zhang   /* scatter mumps distributed solution to petsc vector v_mpi, which shares local arrays with solution matrix X */
104574f0fcc7SHong Zhang   ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr);
104674f0fcc7SHong Zhang   ierr = VecPlaceArray(v_mpi,array);CHKERRQ(ierr);
1047801fbe65SHong Zhang 
1048334c5f61SHong Zhang   /* create scatter scat_sol */
1049be818407SHong Zhang   ierr = MatGetOwnershipRanges(X,&rstart);CHKERRQ(ierr);
1050be818407SHong Zhang   /* iidx: inverse of idx computed above, used for scattering mumps x_seq to petsc X */
1051be818407SHong Zhang   iidx = idx;
1052be818407SHong Zhang   k    = 0;
10532d4298aeSJunchao Zhang   for (proc=0; proc<mumps->petsc_size; proc++){
1054be818407SHong Zhang     for (j=0; j<nrhs; j++){
1055be818407SHong Zhang       for (i=rstart[proc]; i<rstart[proc+1]; i++) iidx[j*M + i] = k++;
1056be818407SHong Zhang     }
1057be818407SHong Zhang   }
1058be818407SHong Zhang 
105971aed81dSHong Zhang   ierr = PetscMalloc1(nlsol_loc,&idxx);CHKERRQ(ierr);
106071aed81dSHong Zhang   ierr = ISCreateStride(PETSC_COMM_SELF,nlsol_loc,0,1,&is_from);CHKERRQ(ierr);
106171aed81dSHong Zhang   for (i=0; i<lsol_loc; i++) {
1062334c5f61SHong Zhang     isol_loc[i] -= 1; /* change Fortran style to C style */
1063334c5f61SHong Zhang     idxx[i] = iidx[isol_loc[i]];
1064801fbe65SHong Zhang     for (j=1; j<nrhs; j++){
1065334c5f61SHong Zhang       idxx[j*lsol_loc+i] = iidx[isol_loc[i]+j*M];
1066801fbe65SHong Zhang     }
1067801fbe65SHong Zhang   }
1068be818407SHong Zhang   ierr = ISCreateGeneral(PETSC_COMM_SELF,nlsol_loc,idxx,PETSC_COPY_VALUES,&is_to);CHKERRQ(ierr);
1069*35928de7SBarry Smith   ierr = VecScatterCreateWithData(x_seq,is_from,v_mpi,is_to,&scat_sol);CHKERRQ(ierr);
1070334c5f61SHong Zhang   ierr = VecScatterBegin(scat_sol,x_seq,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1071801fbe65SHong Zhang   ierr = ISDestroy(&is_from);CHKERRQ(ierr);
1072801fbe65SHong Zhang   ierr = ISDestroy(&is_to);CHKERRQ(ierr);
1073334c5f61SHong Zhang   ierr = VecScatterEnd(scat_sol,x_seq,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1074801fbe65SHong Zhang   ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr);
107571aed81dSHong Zhang 
107671aed81dSHong Zhang   /* free spaces */
107771aed81dSHong Zhang   mumps->id.sol_loc  = sol_loc_save;
107871aed81dSHong Zhang   mumps->id.isol_loc = isol_loc_save;
107971aed81dSHong Zhang 
108071aed81dSHong Zhang   ierr = PetscFree2(sol_loc,isol_loc);CHKERRQ(ierr);
1081be818407SHong Zhang   ierr = PetscFree(idx);CHKERRQ(ierr);
1082801fbe65SHong Zhang   ierr = PetscFree(idxx);CHKERRQ(ierr);
108371aed81dSHong Zhang   ierr = VecDestroy(&x_seq);CHKERRQ(ierr);
108474f0fcc7SHong Zhang   ierr = VecDestroy(&v_mpi);CHKERRQ(ierr);
10852b691707SHong Zhang   if (Bt) {
10862b691707SHong Zhang     if (!mumps->myid) {
1087d56c302dSHong Zhang       b = (Mat_MPIAIJ*)Bt->data;
10882b691707SHong Zhang       ierr = MatSeqAIJRestoreArray(b->A,&aa);CHKERRQ(ierr);
1089be818407SHong Zhang       ierr = MatRestoreRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr);
1090c0be3364SHong Zhang       if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure");
10912b691707SHong Zhang     }
10922b691707SHong Zhang   } else {
1093334c5f61SHong Zhang     ierr = VecDestroy(&b_seq);CHKERRQ(ierr);
1094334c5f61SHong Zhang     ierr = VecScatterDestroy(&scat_rhs);CHKERRQ(ierr);
10952b691707SHong Zhang   }
1096334c5f61SHong Zhang   ierr = VecScatterDestroy(&scat_sol);CHKERRQ(ierr);
10979880c9b4SStefano Zampini   ierr = PetscLogFlops(2.0*nrhs*mumps->id.RINFO(3));CHKERRQ(ierr);
1098e0b74bf9SHong Zhang   PetscFunctionReturn(0);
1099e0b74bf9SHong Zhang }
1100e0b74bf9SHong Zhang 
1101eb3ef3b2SHong Zhang PetscErrorCode MatMatTransposeSolve_MUMPS(Mat A,Mat Bt,Mat X)
1102eb3ef3b2SHong Zhang {
1103eb3ef3b2SHong Zhang   PetscErrorCode ierr;
1104eb3ef3b2SHong Zhang   PetscBool      flg;
1105eb3ef3b2SHong Zhang   Mat            B;
1106eb3ef3b2SHong Zhang 
1107eb3ef3b2SHong Zhang   PetscFunctionBegin;
1108eb3ef3b2SHong Zhang   ierr = PetscObjectTypeCompareAny((PetscObject)Bt,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr);
1109eb3ef3b2SHong Zhang   if (!flg) SETERRQ(PetscObjectComm((PetscObject)Bt),PETSC_ERR_ARG_WRONG,"Matrix Bt must be MATAIJ matrix");
1110eb3ef3b2SHong Zhang 
1111eb3ef3b2SHong Zhang   /* Create B=Bt^T that uses Bt's data structure */
1112eb3ef3b2SHong Zhang   ierr = MatCreateTranspose(Bt,&B);CHKERRQ(ierr);
1113eb3ef3b2SHong Zhang 
11140e6b8875SHong Zhang   ierr = MatMatSolve_MUMPS(A,B,X);CHKERRQ(ierr);
1115eb3ef3b2SHong Zhang   ierr = MatDestroy(&B);CHKERRQ(ierr);
1116eb3ef3b2SHong Zhang   PetscFunctionReturn(0);
1117eb3ef3b2SHong Zhang }
1118eb3ef3b2SHong Zhang 
1119ace3df97SHong Zhang #if !defined(PETSC_USE_COMPLEX)
1120a58c3f20SHong Zhang /*
1121a58c3f20SHong Zhang   input:
1122a58c3f20SHong Zhang    F:        numeric factor
1123a58c3f20SHong Zhang   output:
1124a58c3f20SHong Zhang    nneg:     total number of negative pivots
112519d49a3bSHong Zhang    nzero:    total number of zero pivots
112619d49a3bSHong Zhang    npos:     (global dimension of F) - nneg - nzero
1127a58c3f20SHong Zhang */
1128dfbe8321SBarry Smith PetscErrorCode MatGetInertia_SBAIJMUMPS(Mat F,int *nneg,int *nzero,int *npos)
1129a58c3f20SHong Zhang {
1130e69c285eSBarry Smith   Mat_MUMPS      *mumps =(Mat_MUMPS*)F->data;
1131dfbe8321SBarry Smith   PetscErrorCode ierr;
1132c1490034SHong Zhang   PetscMPIInt    size;
1133a58c3f20SHong Zhang 
1134a58c3f20SHong Zhang   PetscFunctionBegin;
1135ce94432eSBarry Smith   ierr = MPI_Comm_size(PetscObjectComm((PetscObject)F),&size);CHKERRQ(ierr);
1136bcb30aebSHong Zhang   /* MUMPS 4.3.1 calls ScaLAPACK when ICNTL(13)=0 (default), which does not offer the possibility to compute the inertia of a dense matrix. Set ICNTL(13)=1 to skip ScaLAPACK */
1137a5e57a09SHong Zhang   if (size > 1 && mumps->id.ICNTL(13) != 1) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"ICNTL(13)=%d. -mat_mumps_icntl_13 must be set as 1 for correct global matrix inertia\n",mumps->id.INFOG(13));
1138ed85ac9fSHong Zhang 
1139710ac8efSHong Zhang   if (nneg) *nneg = mumps->id.INFOG(12);
1140ed85ac9fSHong Zhang   if (nzero || npos) {
1141ed85ac9fSHong Zhang     if (mumps->id.ICNTL(24) != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"-mat_mumps_icntl_24 must be set as 1 for null pivot row detection");
1142710ac8efSHong Zhang     if (nzero) *nzero = mumps->id.INFOG(28);
1143710ac8efSHong Zhang     if (npos) *npos   = F->rmap->N - (mumps->id.INFOG(12) + mumps->id.INFOG(28));
1144a58c3f20SHong Zhang   }
1145a58c3f20SHong Zhang   PetscFunctionReturn(0);
1146a58c3f20SHong Zhang }
114719d49a3bSHong Zhang #endif
1148a58c3f20SHong Zhang 
11493ab56b82SJunchao Zhang PetscErrorCode MatMumpsGatherNonzerosOnMaster(MatReuse reuse,Mat_MUMPS *mumps)
11503ab56b82SJunchao Zhang {
11513ab56b82SJunchao Zhang   PetscErrorCode ierr;
11526ac9f4daSSatish Balay   PetscInt       i,nz=0,*irn,*jcn=0;
11536ac9f4daSSatish Balay   PetscScalar    *val=0;
11543ab56b82SJunchao Zhang   PetscMPIInt    mpinz,*recvcount=NULL,*displs=NULL;
11553ab56b82SJunchao Zhang 
11563ab56b82SJunchao Zhang   PetscFunctionBegin;
11573ab56b82SJunchao Zhang   if (mumps->omp_comm_size > 1) {
11583ab56b82SJunchao Zhang     if (reuse == MAT_INITIAL_MATRIX) {
11593ab56b82SJunchao Zhang       /* master first gathers counts of nonzeros to receive */
11603ab56b82SJunchao Zhang       if (mumps->is_omp_master) { ierr = PetscMalloc2(mumps->omp_comm_size,&recvcount,mumps->omp_comm_size,&displs);CHKERRQ(ierr); }
11613ab56b82SJunchao Zhang       ierr = PetscMPIIntCast(mumps->nz,&mpinz);CHKERRQ(ierr);
11623ab56b82SJunchao Zhang       ierr = MPI_Gather(&mpinz,1,MPI_INT,recvcount,1,MPI_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr);
11633ab56b82SJunchao Zhang 
11643ab56b82SJunchao Zhang       /* master allocates memory to receive nonzeros */
11653ab56b82SJunchao Zhang       if (mumps->is_omp_master) {
11663ab56b82SJunchao Zhang         displs[0] = 0;
11673ab56b82SJunchao Zhang         for (i=1; i<mumps->omp_comm_size; i++) displs[i] = displs[i-1] + recvcount[i-1];
11683ab56b82SJunchao Zhang         nz   = displs[mumps->omp_comm_size-1] + recvcount[mumps->omp_comm_size-1];
11693ab56b82SJunchao Zhang         ierr = PetscMalloc(2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar),&irn);CHKERRQ(ierr);
11703ab56b82SJunchao Zhang         jcn  = irn + nz;
11713ab56b82SJunchao Zhang         val  = (PetscScalar*)(jcn + nz);
11723ab56b82SJunchao Zhang       }
11733ab56b82SJunchao Zhang 
11743ab56b82SJunchao Zhang       /* save the gatherv plan */
11753ab56b82SJunchao Zhang       mumps->mpinz     = mpinz; /* used as send count */
11763ab56b82SJunchao Zhang       mumps->recvcount = recvcount;
11773ab56b82SJunchao Zhang       mumps->displs    = displs;
11783ab56b82SJunchao Zhang 
11793ab56b82SJunchao Zhang       /* master gathers nonzeros */
11803ab56b82SJunchao Zhang       ierr = MPI_Gatherv(mumps->irn,mpinz,MPIU_INT,irn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr);
11813ab56b82SJunchao Zhang       ierr = MPI_Gatherv(mumps->jcn,mpinz,MPIU_INT,jcn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr);
11823ab56b82SJunchao Zhang       ierr = MPI_Gatherv(mumps->val,mpinz,MPIU_SCALAR,val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr);
11833ab56b82SJunchao Zhang 
11843ab56b82SJunchao Zhang       /* master frees its row/col/val and replaces them with bigger arrays */
11853ab56b82SJunchao Zhang       if (mumps->is_omp_master) {
11863ab56b82SJunchao Zhang         ierr = PetscFree(mumps->irn);CHKERRQ(ierr); /* irn/jcn/val are allocated together so free only irn */
11873ab56b82SJunchao Zhang         mumps->nz  = nz; /* it is a sum of mpinz over omp_comm */
11883ab56b82SJunchao Zhang         mumps->irn = irn;
11893ab56b82SJunchao Zhang         mumps->jcn = jcn;
11903ab56b82SJunchao Zhang         mumps->val = val;
11913ab56b82SJunchao Zhang       }
11923ab56b82SJunchao Zhang     } else {
11933ab56b82SJunchao Zhang       ierr = MPI_Gatherv((mumps->is_omp_master?MPI_IN_PLACE:mumps->val),mumps->mpinz,MPIU_SCALAR,mumps->val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr);
11943ab56b82SJunchao Zhang     }
11953ab56b82SJunchao Zhang   }
11963ab56b82SJunchao Zhang   PetscFunctionReturn(0);
11973ab56b82SJunchao Zhang }
11983ab56b82SJunchao Zhang 
11990481f469SBarry Smith PetscErrorCode MatFactorNumeric_MUMPS(Mat F,Mat A,const MatFactorInfo *info)
1200af281ebdSHong Zhang {
1201e69c285eSBarry Smith   Mat_MUMPS      *mumps =(Mat_MUMPS*)(F)->data;
12026849ba73SBarry Smith   PetscErrorCode ierr;
1203ace3abfcSBarry Smith   PetscBool      isMPIAIJ;
1204397b6df1SKris Buschelman 
1205397b6df1SKris Buschelman   PetscFunctionBegin;
12066baea169SHong Zhang   if (mumps->id.INFOG(1) < 0) {
12072aca8efcSHong Zhang     if (mumps->id.INFOG(1) == -6) {
12082aca8efcSHong Zhang       ierr = PetscInfo2(A,"MatFactorNumeric is called with singular matrix structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
12096baea169SHong Zhang     }
12106baea169SHong Zhang     ierr = PetscInfo2(A,"MatFactorNumeric is called after analysis phase fails, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
12112aca8efcSHong Zhang     PetscFunctionReturn(0);
12122aca8efcSHong Zhang   }
12136baea169SHong Zhang 
1214a5e57a09SHong Zhang   ierr = (*mumps->ConvertToTriples)(A, 1, MAT_REUSE_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr);
12153ab56b82SJunchao Zhang   ierr = MatMumpsGatherNonzerosOnMaster(MAT_REUSE_MATRIX,mumps);CHKERRQ(ierr);
1216397b6df1SKris Buschelman 
1217397b6df1SKris Buschelman   /* numerical factorization phase */
1218329ec9b3SHong Zhang   /*-------------------------------*/
1219a5e57a09SHong Zhang   mumps->id.job = JOB_FACTNUMERIC;
12204e34a73bSHong Zhang   if (!mumps->id.ICNTL(18)) { /* A is centralized */
1221a5e57a09SHong Zhang     if (!mumps->myid) {
1222940cd9d6SSatish Balay       mumps->id.a = (MumpsScalar*)mumps->val;
1223397b6df1SKris Buschelman     }
1224397b6df1SKris Buschelman   } else {
1225940cd9d6SSatish Balay     mumps->id.a_loc = (MumpsScalar*)mumps->val;
1226397b6df1SKris Buschelman   }
12273ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
1228a5e57a09SHong Zhang   if (mumps->id.INFOG(1) < 0) {
1229c0d63f2fSHong Zhang     if (A->erroriffailure) {
1230c0d63f2fSHong Zhang       SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));
1231151787a6SHong Zhang     } else {
1232c0d63f2fSHong Zhang       if (mumps->id.INFOG(1) == -10) { /* numerically singular matrix */
12332aca8efcSHong Zhang         ierr = PetscInfo2(F,"matrix is numerically singular, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
1234603e8f96SBarry Smith         F->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT;
1235c0d63f2fSHong Zhang       } else if (mumps->id.INFOG(1) == -13) {
1236c0d63f2fSHong Zhang         ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, cannot allocate required memory %d megabytes\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
1237603e8f96SBarry Smith         F->factorerrortype = MAT_FACTOR_OUTMEMORY;
1238c0d63f2fSHong Zhang       } else if (mumps->id.INFOG(1) == -8 || mumps->id.INFOG(1) == -9 || (-16 < mumps->id.INFOG(1) && mumps->id.INFOG(1) < -10) ) {
1239c0d63f2fSHong Zhang         ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d, problem with workarray \n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
1240603e8f96SBarry Smith         F->factorerrortype = MAT_FACTOR_OUTMEMORY;
12412aca8efcSHong Zhang       } else {
1242c0d63f2fSHong Zhang         ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
1243603e8f96SBarry Smith         F->factorerrortype = MAT_FACTOR_OTHER;
1244151787a6SHong Zhang       }
12452aca8efcSHong Zhang     }
1246397b6df1SKris Buschelman   }
1247a5e57a09SHong Zhang   if (!mumps->myid && mumps->id.ICNTL(16) > 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"  mumps->id.ICNTL(16):=%d\n",mumps->id.INFOG(16));
1248397b6df1SKris Buschelman 
1249b3cb21ddSStefano Zampini   F->assembled    = PETSC_TRUE;
1250a5e57a09SHong Zhang   mumps->matstruc = SAME_NONZERO_PATTERN;
1251b3cb21ddSStefano Zampini   if (F->schur) { /* reset Schur status to unfactored */
1252b3cb21ddSStefano Zampini     if (mumps->id.ICNTL(19) == 1) { /* stored by rows */
1253b3cb21ddSStefano Zampini       mumps->id.ICNTL(19) = 2;
1254b3cb21ddSStefano Zampini       ierr = MatTranspose(F->schur,MAT_INPLACE_MATRIX,&F->schur);CHKERRQ(ierr);
1255b3cb21ddSStefano Zampini     }
1256b3cb21ddSStefano Zampini     ierr = MatFactorRestoreSchurComplement(F,NULL,MAT_FACTOR_SCHUR_UNFACTORED);CHKERRQ(ierr);
1257b3cb21ddSStefano Zampini   }
125867877ebaSShri Abhyankar 
1259066565c5SStefano Zampini   /* just to be sure that ICNTL(19) value returned by a call from MatMumpsGetIcntl is always consistent */
1260066565c5SStefano Zampini   if (!mumps->sym && mumps->id.ICNTL(19) && mumps->id.ICNTL(19) != 1) mumps->id.ICNTL(19) = 3;
1261066565c5SStefano Zampini 
12623ab56b82SJunchao Zhang   if (!mumps->is_omp_master) mumps->id.INFO(23) = 0;
12632d4298aeSJunchao Zhang   if (mumps->petsc_size > 1) {
126467877ebaSShri Abhyankar     PetscInt    lsol_loc;
126567877ebaSShri Abhyankar     PetscScalar *sol_loc;
12662205254eSKarl Rupp 
1267c2093ab7SHong Zhang     ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&isMPIAIJ);CHKERRQ(ierr);
1268c2093ab7SHong Zhang 
1269c2093ab7SHong Zhang     /* distributed solution; Create x_seq=sol_loc for repeated use */
1270c2093ab7SHong Zhang     if (mumps->x_seq) {
1271c2093ab7SHong Zhang       ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr);
1272c2093ab7SHong Zhang       ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr);
1273c2093ab7SHong Zhang       ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr);
1274c2093ab7SHong Zhang     }
1275a5e57a09SHong Zhang     lsol_loc = mumps->id.INFO(23); /* length of sol_loc */
1276dcca6d9dSJed Brown     ierr = PetscMalloc2(lsol_loc,&sol_loc,lsol_loc,&mumps->id.isol_loc);CHKERRQ(ierr);
1277a5e57a09SHong Zhang     mumps->id.lsol_loc = lsol_loc;
1278940cd9d6SSatish Balay     mumps->id.sol_loc = (MumpsScalar*)sol_loc;
1279a5e57a09SHong Zhang     ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,lsol_loc,sol_loc,&mumps->x_seq);CHKERRQ(ierr);
128067877ebaSShri Abhyankar   }
12819880c9b4SStefano Zampini   ierr = PetscLogFlops(mumps->id.RINFO(2));CHKERRQ(ierr);
1282397b6df1SKris Buschelman   PetscFunctionReturn(0);
1283397b6df1SKris Buschelman }
1284397b6df1SKris Buschelman 
12859a2535b5SHong Zhang /* Sets MUMPS options from the options database */
12869a2535b5SHong Zhang PetscErrorCode PetscSetMUMPSFromOptions(Mat F, Mat A)
1287dcd589f8SShri Abhyankar {
1288e69c285eSBarry Smith   Mat_MUMPS      *mumps = (Mat_MUMPS*)F->data;
1289dcd589f8SShri Abhyankar   PetscErrorCode ierr;
1290b34f08ffSHong Zhang   PetscInt       icntl,info[40],i,ninfo=40;
1291ace3abfcSBarry Smith   PetscBool      flg;
1292dcd589f8SShri Abhyankar 
1293dcd589f8SShri Abhyankar   PetscFunctionBegin;
1294ce94432eSBarry Smith   ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MUMPS Options","Mat");CHKERRQ(ierr);
12959a2535b5SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_1","ICNTL(1): output stream for error messages","None",mumps->id.ICNTL(1),&icntl,&flg);CHKERRQ(ierr);
12969a2535b5SHong Zhang   if (flg) mumps->id.ICNTL(1) = icntl;
12979a2535b5SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_2","ICNTL(2): output stream for diagnostic printing, statistics, and warning","None",mumps->id.ICNTL(2),&icntl,&flg);CHKERRQ(ierr);
12989a2535b5SHong Zhang   if (flg) mumps->id.ICNTL(2) = icntl;
12999a2535b5SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_3","ICNTL(3): output stream for global information, collected on the host","None",mumps->id.ICNTL(3),&icntl,&flg);CHKERRQ(ierr);
13009a2535b5SHong Zhang   if (flg) mumps->id.ICNTL(3) = icntl;
1301dcd589f8SShri Abhyankar 
13029a2535b5SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_4","ICNTL(4): level of printing (0 to 4)","None",mumps->id.ICNTL(4),&icntl,&flg);CHKERRQ(ierr);
13039a2535b5SHong Zhang   if (flg) mumps->id.ICNTL(4) = icntl;
13049a2535b5SHong Zhang   if (mumps->id.ICNTL(4) || PetscLogPrintInfo) mumps->id.ICNTL(3) = 6; /* resume MUMPS default id.ICNTL(3) = 6 */
13059a2535b5SHong Zhang 
1306d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_6","ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7)","None",mumps->id.ICNTL(6),&icntl,&flg);CHKERRQ(ierr);
13079a2535b5SHong Zhang   if (flg) mumps->id.ICNTL(6) = icntl;
13089a2535b5SHong Zhang 
1309d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_7","ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis","None",mumps->id.ICNTL(7),&icntl,&flg);CHKERRQ(ierr);
1310dcd589f8SShri Abhyankar   if (flg) {
13112d4298aeSJunchao Zhang     if (icntl== 1 && mumps->petsc_size > 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"pivot order be set by the user in PERM_IN -- not supported by the PETSc/MUMPS interface\n");
13122205254eSKarl Rupp     else mumps->id.ICNTL(7) = icntl;
1313dcd589f8SShri Abhyankar   }
1314e0b74bf9SHong Zhang 
13150298fd71SBarry Smith   ierr = PetscOptionsInt("-mat_mumps_icntl_8","ICNTL(8): scaling strategy (-2 to 8 or 77)","None",mumps->id.ICNTL(8),&mumps->id.ICNTL(8),NULL);CHKERRQ(ierr);
1316d341cd04SHong Zhang   /* ierr = PetscOptionsInt("-mat_mumps_icntl_9","ICNTL(9): computes the solution using A or A^T","None",mumps->id.ICNTL(9),&mumps->id.ICNTL(9),NULL);CHKERRQ(ierr); handled by MatSolveTranspose_MUMPS() */
13170298fd71SBarry Smith   ierr = PetscOptionsInt("-mat_mumps_icntl_10","ICNTL(10): max num of refinements","None",mumps->id.ICNTL(10),&mumps->id.ICNTL(10),NULL);CHKERRQ(ierr);
1318d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_11","ICNTL(11): statistics related to an error analysis (via -ksp_view)","None",mumps->id.ICNTL(11),&mumps->id.ICNTL(11),NULL);CHKERRQ(ierr);
1319d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_12","ICNTL(12): an ordering strategy for symmetric matrices (0 to 3)","None",mumps->id.ICNTL(12),&mumps->id.ICNTL(12),NULL);CHKERRQ(ierr);
1320d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_13","ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting","None",mumps->id.ICNTL(13),&mumps->id.ICNTL(13),NULL);CHKERRQ(ierr);
1321d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_14","ICNTL(14): percentage increase in the estimated working space","None",mumps->id.ICNTL(14),&mumps->id.ICNTL(14),NULL);CHKERRQ(ierr);
1322d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_19","ICNTL(19): computes the Schur complement","None",mumps->id.ICNTL(19),&mumps->id.ICNTL(19),NULL);CHKERRQ(ierr);
132359ac8732SStefano Zampini   if (mumps->id.ICNTL(19) <= 0 || mumps->id.ICNTL(19) > 3) { /* reset any schur data (if any) */
1324b3cb21ddSStefano Zampini     ierr = MatDestroy(&F->schur);CHKERRQ(ierr);
132559ac8732SStefano Zampini     ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr);
132659ac8732SStefano Zampini   }
13274e34a73bSHong Zhang   /* ierr = PetscOptionsInt("-mat_mumps_icntl_20","ICNTL(20): the format (dense or sparse) of the right-hand sides","None",mumps->id.ICNTL(20),&mumps->id.ICNTL(20),NULL);CHKERRQ(ierr); -- sparse rhs is not supported in PETSc API */
1328d341cd04SHong Zhang   /* ierr = PetscOptionsInt("-mat_mumps_icntl_21","ICNTL(21): the distribution (centralized or distributed) of the solution vectors","None",mumps->id.ICNTL(21),&mumps->id.ICNTL(21),NULL);CHKERRQ(ierr); we only use distributed solution vector */
13299a2535b5SHong Zhang 
1330d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_22","ICNTL(22): in-core/out-of-core factorization and solve (0 or 1)","None",mumps->id.ICNTL(22),&mumps->id.ICNTL(22),NULL);CHKERRQ(ierr);
13310298fd71SBarry Smith   ierr = PetscOptionsInt("-mat_mumps_icntl_23","ICNTL(23): max size of the working memory (MB) that can allocate per processor","None",mumps->id.ICNTL(23),&mumps->id.ICNTL(23),NULL);CHKERRQ(ierr);
13320298fd71SBarry Smith   ierr = PetscOptionsInt("-mat_mumps_icntl_24","ICNTL(24): detection of null pivot rows (0 or 1)","None",mumps->id.ICNTL(24),&mumps->id.ICNTL(24),NULL);CHKERRQ(ierr);
13339a2535b5SHong Zhang   if (mumps->id.ICNTL(24)) {
13349a2535b5SHong Zhang     mumps->id.ICNTL(13) = 1; /* turn-off ScaLAPACK to help with the correct detection of null pivots */
1335d7ebd59bSHong Zhang   }
1336d7ebd59bSHong Zhang 
1337b4ed93dbSHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_25","ICNTL(25): computes a solution of a deficient matrix and a null space basis","None",mumps->id.ICNTL(25),&mumps->id.ICNTL(25),NULL);CHKERRQ(ierr);
1338d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_26","ICNTL(26): drives the solution phase if a Schur complement matrix","None",mumps->id.ICNTL(26),&mumps->id.ICNTL(26),NULL);CHKERRQ(ierr);
13392cd7d884SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_27","ICNTL(27): the blocking size for multiple right-hand sides","None",mumps->id.ICNTL(27),&mumps->id.ICNTL(27),NULL);CHKERRQ(ierr);
13400298fd71SBarry Smith   ierr = PetscOptionsInt("-mat_mumps_icntl_28","ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering","None",mumps->id.ICNTL(28),&mumps->id.ICNTL(28),NULL);CHKERRQ(ierr);
1341d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_29","ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis","None",mumps->id.ICNTL(29),&mumps->id.ICNTL(29),NULL);CHKERRQ(ierr);
134289a9c03aSHong Zhang   /* ierr = PetscOptionsInt("-mat_mumps_icntl_30","ICNTL(30): compute user-specified set of entries in inv(A)","None",mumps->id.ICNTL(30),&mumps->id.ICNTL(30),NULL);CHKERRQ(ierr); */ /* call MatMumpsGetInverse() directly */
1343d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_31","ICNTL(31): indicates which factors may be discarded during factorization","None",mumps->id.ICNTL(31),&mumps->id.ICNTL(31),NULL);CHKERRQ(ierr);
13444e34a73bSHong Zhang   /* ierr = PetscOptionsInt("-mat_mumps_icntl_32","ICNTL(32): performs the forward elemination of the right-hand sides during factorization","None",mumps->id.ICNTL(32),&mumps->id.ICNTL(32),NULL);CHKERRQ(ierr);  -- not supported by PETSc API */
13450298fd71SBarry Smith   ierr = PetscOptionsInt("-mat_mumps_icntl_33","ICNTL(33): compute determinant","None",mumps->id.ICNTL(33),&mumps->id.ICNTL(33),NULL);CHKERRQ(ierr);
1346b4ed93dbSHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_35","ICNTL(35): activates Block Lock Rank (BLR) based factorization","None",mumps->id.ICNTL(35),&mumps->id.ICNTL(35),NULL);CHKERRQ(ierr);
1347dcd589f8SShri Abhyankar 
13480298fd71SBarry Smith   ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr);
13490298fd71SBarry Smith   ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr);
13500298fd71SBarry Smith   ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr);
13510298fd71SBarry Smith   ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr);
13520298fd71SBarry Smith   ierr = PetscOptionsReal("-mat_mumps_cntl_5","CNTL(5): fixation for null pivots","None",mumps->id.CNTL(5),&mumps->id.CNTL(5),NULL);CHKERRQ(ierr);
1353b4ed93dbSHong Zhang   ierr = PetscOptionsReal("-mat_mumps_cntl_7","CNTL(7): dropping parameter used during BLR","None",mumps->id.CNTL(7),&mumps->id.CNTL(7),NULL);CHKERRQ(ierr);
1354e5bb22a1SHong Zhang 
13552a808120SBarry Smith   ierr = PetscOptionsString("-mat_mumps_ooc_tmpdir", "out of core directory", "None", mumps->id.ooc_tmpdir, mumps->id.ooc_tmpdir, 256, NULL);CHKERRQ(ierr);
1356b34f08ffSHong Zhang 
135716d797efSHong Zhang   ierr = PetscOptionsIntArray("-mat_mumps_view_info","request INFO local to each processor","",info,&ninfo,NULL);CHKERRQ(ierr);
1358b34f08ffSHong Zhang   if (ninfo) {
1359b34f08ffSHong Zhang     if (ninfo > 40) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"number of INFO %d must <= 40\n",ninfo);
1360b34f08ffSHong Zhang     ierr = PetscMalloc1(ninfo,&mumps->info);CHKERRQ(ierr);
1361b34f08ffSHong Zhang     mumps->ninfo = ninfo;
1362b34f08ffSHong Zhang     for (i=0; i<ninfo; i++) {
13636c4ed002SBarry Smith       if (info[i] < 0 || info[i]>40) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"index of INFO %d must between 1 and 40\n",ninfo);
13642a808120SBarry Smith       else  mumps->info[i] = info[i];
1365b34f08ffSHong Zhang     }
1366b34f08ffSHong Zhang   }
1367b34f08ffSHong Zhang 
13682a808120SBarry Smith   ierr = PetscOptionsEnd();CHKERRQ(ierr);
1369dcd589f8SShri Abhyankar   PetscFunctionReturn(0);
1370dcd589f8SShri Abhyankar }
1371dcd589f8SShri Abhyankar 
1372f697e70eSHong Zhang PetscErrorCode PetscInitializeMUMPS(Mat A,Mat_MUMPS *mumps)
1373dcd589f8SShri Abhyankar {
1374dcd589f8SShri Abhyankar   PetscErrorCode ierr;
13757c405c4aSJunchao Zhang   PetscInt       nthreads=0;
1376dcd589f8SShri Abhyankar 
1377dcd589f8SShri Abhyankar   PetscFunctionBegin;
13783ab56b82SJunchao Zhang   mumps->petsc_comm = PetscObjectComm((PetscObject)A);
13793ab56b82SJunchao Zhang   ierr = MPI_Comm_size(mumps->petsc_comm,&mumps->petsc_size);CHKERRQ(ierr);
13803ab56b82SJunchao Zhang   ierr = MPI_Comm_rank(mumps->petsc_comm,&mumps->myid);CHKERRQ(ierr); /* so that code like "if (!myid)" still works even if mumps_comm is different */
13813ab56b82SJunchao Zhang 
13827c405c4aSJunchao Zhang   ierr = PetscOptionsHasName(NULL,NULL,"-mat_mumps_use_omp_threads",&mumps->use_petsc_omp_support);CHKERRQ(ierr);
13837c405c4aSJunchao Zhang   if (mumps->use_petsc_omp_support) nthreads = -1; /* -1 will let PetscOmpCtrlCreate() guess a proper value when user did not supply one */
13847c405c4aSJunchao Zhang   ierr = PetscOptionsGetInt(NULL,NULL,"-mat_mumps_use_omp_threads",&nthreads,NULL);CHKERRQ(ierr);
13853ab56b82SJunchao Zhang   if (mumps->use_petsc_omp_support) {
13863ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT)
13873ab56b82SJunchao Zhang     ierr = PetscOmpCtrlCreate(mumps->petsc_comm,nthreads,&mumps->omp_ctrl);CHKERRQ(ierr);
13883ab56b82SJunchao Zhang     ierr = PetscOmpCtrlGetOmpComms(mumps->omp_ctrl,&mumps->omp_comm,&mumps->mumps_comm,&mumps->is_omp_master);CHKERRQ(ierr);
13893ab56b82SJunchao Zhang #else
1390217d3b1eSJunchao Zhang     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP_SYS,"the system does not have PETSc OpenMP support but you added the -mat_mumps_use_omp_threads option. Configure PETSc with --with-openmp --download-hwloc (or --with-hwloc) to enable it, see more in MATSOLVERMUMPS manual\n");
13913ab56b82SJunchao Zhang #endif
13923ab56b82SJunchao Zhang   } else {
13933ab56b82SJunchao Zhang     mumps->omp_comm      = PETSC_COMM_SELF;
13943ab56b82SJunchao Zhang     mumps->mumps_comm    = mumps->petsc_comm;
13953ab56b82SJunchao Zhang     mumps->is_omp_master = PETSC_TRUE;
13963ab56b82SJunchao Zhang   }
13973ab56b82SJunchao Zhang   ierr = MPI_Comm_size(mumps->omp_comm,&mumps->omp_comm_size);CHKERRQ(ierr);
13982205254eSKarl Rupp 
13992d4298aeSJunchao Zhang   mumps->id.comm_fortran = MPI_Comm_c2f(mumps->mumps_comm);
1400f697e70eSHong Zhang   mumps->id.job = JOB_INIT;
1401f697e70eSHong Zhang   mumps->id.par = 1;  /* host participates factorizaton and solve */
1402f697e70eSHong Zhang   mumps->id.sym = mumps->sym;
14033ab56b82SJunchao Zhang 
14043ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
14053ab56b82SJunchao Zhang 
14063ab56b82SJunchao Zhang   /* copy MUMPS default control values from master to slaves. Although slaves do not call MUMPS, they may access these values in code.
14073ab56b82SJunchao Zhang      For example, ICNTL(9) is initialized to 1 by MUMPS and slaves check ICNTL(9) in MatSolve_MUMPS.
14083ab56b82SJunchao Zhang    */
14093ab56b82SJunchao Zhang   ierr = MPI_Bcast(mumps->id.icntl,40,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 Manual Section 9 */
14103ab56b82SJunchao Zhang   ierr = MPI_Bcast(mumps->id.cntl, 15,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr);
1411f697e70eSHong Zhang 
14120298fd71SBarry Smith   mumps->scat_rhs     = NULL;
14130298fd71SBarry Smith   mumps->scat_sol     = NULL;
14149a2535b5SHong Zhang 
141570544d5fSHong Zhang   /* set PETSc-MUMPS default options - override MUMPS default */
14169a2535b5SHong Zhang   mumps->id.ICNTL(3) = 0;
14179a2535b5SHong Zhang   mumps->id.ICNTL(4) = 0;
14182d4298aeSJunchao Zhang   if (mumps->petsc_size == 1) {
14199a2535b5SHong Zhang     mumps->id.ICNTL(18) = 0;   /* centralized assembled matrix input */
14209a2535b5SHong Zhang   } else {
14219a2535b5SHong Zhang     mumps->id.ICNTL(18) = 3;   /* distributed assembled matrix input */
14224e34a73bSHong Zhang     mumps->id.ICNTL(20) = 0;   /* rhs is in dense format */
142370544d5fSHong Zhang     mumps->id.ICNTL(21) = 1;   /* distributed solution */
14249a2535b5SHong Zhang   }
14256444a565SStefano Zampini 
14266444a565SStefano Zampini   /* schur */
14276444a565SStefano Zampini   mumps->id.size_schur      = 0;
14286444a565SStefano Zampini   mumps->id.listvar_schur   = NULL;
14296444a565SStefano Zampini   mumps->id.schur           = NULL;
1430b5fa320bSStefano Zampini   mumps->sizeredrhs         = 0;
143159ac8732SStefano Zampini   mumps->schur_sol          = NULL;
143259ac8732SStefano Zampini   mumps->schur_sizesol      = 0;
1433dcd589f8SShri Abhyankar   PetscFunctionReturn(0);
1434dcd589f8SShri Abhyankar }
1435dcd589f8SShri Abhyankar 
14369a625307SHong Zhang PetscErrorCode MatFactorSymbolic_MUMPS_ReportIfError(Mat F,Mat A,const MatFactorInfo *info,Mat_MUMPS *mumps)
14375cd7cf9dSHong Zhang {
14385cd7cf9dSHong Zhang   PetscErrorCode ierr;
14395cd7cf9dSHong Zhang 
14405cd7cf9dSHong Zhang   PetscFunctionBegin;
14413ab56b82SJunchao Zhang   ierr = MPI_Bcast(mumps->id.infog, 40,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 manual p82 */
14423ab56b82SJunchao Zhang   ierr = MPI_Bcast(mumps->id.rinfog,20,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr);
14435cd7cf9dSHong Zhang   if (mumps->id.INFOG(1) < 0) {
14445cd7cf9dSHong Zhang     if (A->erroriffailure) {
14455cd7cf9dSHong Zhang       SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in analysis phase: INFOG(1)=%d\n",mumps->id.INFOG(1));
14465cd7cf9dSHong Zhang     } else {
14475cd7cf9dSHong Zhang       if (mumps->id.INFOG(1) == -6) {
14485cd7cf9dSHong Zhang         ierr = PetscInfo2(F,"matrix is singular in structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
1449603e8f96SBarry Smith         F->factorerrortype = MAT_FACTOR_STRUCT_ZEROPIVOT;
14505cd7cf9dSHong Zhang       } else if (mumps->id.INFOG(1) == -5 || mumps->id.INFOG(1) == -7) {
14515cd7cf9dSHong Zhang         ierr = PetscInfo2(F,"problem of workspace, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
1452603e8f96SBarry Smith         F->factorerrortype = MAT_FACTOR_OUTMEMORY;
14535cd7cf9dSHong Zhang       } else {
14545cd7cf9dSHong Zhang         ierr = PetscInfo2(F,"Error reported by MUMPS in analysis phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
1455603e8f96SBarry Smith         F->factorerrortype = MAT_FACTOR_OTHER;
14565cd7cf9dSHong Zhang       }
14575cd7cf9dSHong Zhang     }
14585cd7cf9dSHong Zhang   }
14595cd7cf9dSHong Zhang   PetscFunctionReturn(0);
14605cd7cf9dSHong Zhang }
14615cd7cf9dSHong Zhang 
1462a5e57a09SHong Zhang /* Note Petsc r(=c) permutation is used when mumps->id.ICNTL(7)==1 with centralized assembled matrix input; otherwise r and c are ignored */
14630481f469SBarry Smith PetscErrorCode MatLUFactorSymbolic_AIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info)
1464b24902e0SBarry Smith {
1465e69c285eSBarry Smith   Mat_MUMPS      *mumps = (Mat_MUMPS*)F->data;
1466dcd589f8SShri Abhyankar   PetscErrorCode ierr;
146767877ebaSShri Abhyankar   Vec            b;
146867877ebaSShri Abhyankar   IS             is_iden;
146967877ebaSShri Abhyankar   const PetscInt M = A->rmap->N;
1470397b6df1SKris Buschelman 
1471397b6df1SKris Buschelman   PetscFunctionBegin;
1472a5e57a09SHong Zhang   mumps->matstruc = DIFFERENT_NONZERO_PATTERN;
1473dcd589f8SShri Abhyankar 
14749a2535b5SHong Zhang   /* Set MUMPS options from the options database */
14759a2535b5SHong Zhang   ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr);
1476dcd589f8SShri Abhyankar 
1477a5e57a09SHong Zhang   ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr);
14783ab56b82SJunchao Zhang   ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr);
1479dcd589f8SShri Abhyankar 
148067877ebaSShri Abhyankar   /* analysis phase */
148167877ebaSShri Abhyankar   /*----------------*/
1482a5e57a09SHong Zhang   mumps->id.job = JOB_FACTSYMBOLIC;
1483a5e57a09SHong Zhang   mumps->id.n   = M;
1484a5e57a09SHong Zhang   switch (mumps->id.ICNTL(18)) {
148567877ebaSShri Abhyankar   case 0:  /* centralized assembled matrix input */
1486a5e57a09SHong Zhang     if (!mumps->myid) {
1487a5e57a09SHong Zhang       mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn;
1488a5e57a09SHong Zhang       if (mumps->id.ICNTL(6)>1) {
1489940cd9d6SSatish Balay         mumps->id.a = (MumpsScalar*)mumps->val;
149067877ebaSShri Abhyankar       }
1491a5e57a09SHong Zhang       if (mumps->id.ICNTL(7) == 1) { /* use user-provide matrix ordering - assuming r = c ordering */
14925248a706SHong Zhang         /*
14935248a706SHong Zhang         PetscBool      flag;
14945248a706SHong Zhang         ierr = ISEqual(r,c,&flag);CHKERRQ(ierr);
14955248a706SHong Zhang         if (!flag) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"row_perm != col_perm");
14965248a706SHong Zhang         ierr = ISView(r,PETSC_VIEWER_STDOUT_SELF);
14975248a706SHong Zhang          */
1498a5e57a09SHong Zhang         if (!mumps->myid) {
1499e0b74bf9SHong Zhang           const PetscInt *idx;
1500e0b74bf9SHong Zhang           PetscInt       i,*perm_in;
15012205254eSKarl Rupp 
1502785e854fSJed Brown           ierr = PetscMalloc1(M,&perm_in);CHKERRQ(ierr);
1503e0b74bf9SHong Zhang           ierr = ISGetIndices(r,&idx);CHKERRQ(ierr);
15042205254eSKarl Rupp 
1505a5e57a09SHong Zhang           mumps->id.perm_in = perm_in;
1506e0b74bf9SHong Zhang           for (i=0; i<M; i++) perm_in[i] = idx[i]+1; /* perm_in[]: start from 1, not 0! */
1507e0b74bf9SHong Zhang           ierr = ISRestoreIndices(r,&idx);CHKERRQ(ierr);
1508e0b74bf9SHong Zhang         }
1509e0b74bf9SHong Zhang       }
151067877ebaSShri Abhyankar     }
151167877ebaSShri Abhyankar     break;
151267877ebaSShri Abhyankar   case 3:  /* distributed assembled matrix input (size>1) */
1513a5e57a09SHong Zhang     mumps->id.nz_loc = mumps->nz;
1514a5e57a09SHong Zhang     mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn;
1515a5e57a09SHong Zhang     if (mumps->id.ICNTL(6)>1) {
1516940cd9d6SSatish Balay       mumps->id.a_loc = (MumpsScalar*)mumps->val;
151767877ebaSShri Abhyankar     }
151867877ebaSShri Abhyankar     /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */
1519a5e57a09SHong Zhang     if (!mumps->myid) {
15202cd7d884SHong Zhang       ierr = VecCreateSeq(PETSC_COMM_SELF,A->rmap->N,&mumps->b_seq);CHKERRQ(ierr);
15212cd7d884SHong Zhang       ierr = ISCreateStride(PETSC_COMM_SELF,A->rmap->N,0,1,&is_iden);CHKERRQ(ierr);
152267877ebaSShri Abhyankar     } else {
1523a5e57a09SHong Zhang       ierr = VecCreateSeq(PETSC_COMM_SELF,0,&mumps->b_seq);CHKERRQ(ierr);
152467877ebaSShri Abhyankar       ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_iden);CHKERRQ(ierr);
152567877ebaSShri Abhyankar     }
15262a7a6963SBarry Smith     ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr);
1527*35928de7SBarry Smith     ierr = VecScatterCreateWithData(b,is_iden,mumps->b_seq,is_iden,&mumps->scat_rhs);CHKERRQ(ierr);
15286bf464f9SBarry Smith     ierr = ISDestroy(&is_iden);CHKERRQ(ierr);
15296bf464f9SBarry Smith     ierr = VecDestroy(&b);CHKERRQ(ierr);
153067877ebaSShri Abhyankar     break;
153167877ebaSShri Abhyankar   }
15323ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
15335cd7cf9dSHong Zhang   ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr);
153467877ebaSShri Abhyankar 
1535719d5645SBarry Smith   F->ops->lufactornumeric = MatFactorNumeric_MUMPS;
1536dcd589f8SShri Abhyankar   F->ops->solve           = MatSolve_MUMPS;
153751d5961aSHong Zhang   F->ops->solvetranspose  = MatSolveTranspose_MUMPS;
15384e34a73bSHong Zhang   F->ops->matsolve        = MatMatSolve_MUMPS;
1539eb3ef3b2SHong Zhang   F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS;
1540b24902e0SBarry Smith   PetscFunctionReturn(0);
1541b24902e0SBarry Smith }
1542b24902e0SBarry Smith 
1543450b117fSShri Abhyankar /* Note the Petsc r and c permutations are ignored */
1544450b117fSShri Abhyankar PetscErrorCode MatLUFactorSymbolic_BAIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info)
1545450b117fSShri Abhyankar {
1546e69c285eSBarry Smith   Mat_MUMPS      *mumps = (Mat_MUMPS*)F->data;
1547dcd589f8SShri Abhyankar   PetscErrorCode ierr;
154867877ebaSShri Abhyankar   Vec            b;
154967877ebaSShri Abhyankar   IS             is_iden;
155067877ebaSShri Abhyankar   const PetscInt M = A->rmap->N;
1551450b117fSShri Abhyankar 
1552450b117fSShri Abhyankar   PetscFunctionBegin;
1553a5e57a09SHong Zhang   mumps->matstruc = DIFFERENT_NONZERO_PATTERN;
1554dcd589f8SShri Abhyankar 
15559a2535b5SHong Zhang   /* Set MUMPS options from the options database */
15569a2535b5SHong Zhang   ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr);
1557dcd589f8SShri Abhyankar 
1558a5e57a09SHong Zhang   ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr);
15593ab56b82SJunchao Zhang   ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr);
156067877ebaSShri Abhyankar 
156167877ebaSShri Abhyankar   /* analysis phase */
156267877ebaSShri Abhyankar   /*----------------*/
1563a5e57a09SHong Zhang   mumps->id.job = JOB_FACTSYMBOLIC;
1564a5e57a09SHong Zhang   mumps->id.n   = M;
1565a5e57a09SHong Zhang   switch (mumps->id.ICNTL(18)) {
156667877ebaSShri Abhyankar   case 0:  /* centralized assembled matrix input */
1567a5e57a09SHong Zhang     if (!mumps->myid) {
1568a5e57a09SHong Zhang       mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn;
1569a5e57a09SHong Zhang       if (mumps->id.ICNTL(6)>1) {
1570940cd9d6SSatish Balay         mumps->id.a = (MumpsScalar*)mumps->val;
157167877ebaSShri Abhyankar       }
157267877ebaSShri Abhyankar     }
157367877ebaSShri Abhyankar     break;
157467877ebaSShri Abhyankar   case 3:  /* distributed assembled matrix input (size>1) */
1575a5e57a09SHong Zhang     mumps->id.nz_loc = mumps->nz;
1576a5e57a09SHong Zhang     mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn;
1577a5e57a09SHong Zhang     if (mumps->id.ICNTL(6)>1) {
1578940cd9d6SSatish Balay       mumps->id.a_loc = (MumpsScalar*)mumps->val;
157967877ebaSShri Abhyankar     }
158067877ebaSShri Abhyankar     /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */
1581a5e57a09SHong Zhang     if (!mumps->myid) {
1582a5e57a09SHong Zhang       ierr = VecCreateSeq(PETSC_COMM_SELF,A->cmap->N,&mumps->b_seq);CHKERRQ(ierr);
158367877ebaSShri Abhyankar       ierr = ISCreateStride(PETSC_COMM_SELF,A->cmap->N,0,1,&is_iden);CHKERRQ(ierr);
158467877ebaSShri Abhyankar     } else {
1585a5e57a09SHong Zhang       ierr = VecCreateSeq(PETSC_COMM_SELF,0,&mumps->b_seq);CHKERRQ(ierr);
158667877ebaSShri Abhyankar       ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_iden);CHKERRQ(ierr);
158767877ebaSShri Abhyankar     }
15882a7a6963SBarry Smith     ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr);
1589*35928de7SBarry Smith     ierr = VecScatterCreateWithData(b,is_iden,mumps->b_seq,is_iden,&mumps->scat_rhs);CHKERRQ(ierr);
15906bf464f9SBarry Smith     ierr = ISDestroy(&is_iden);CHKERRQ(ierr);
15916bf464f9SBarry Smith     ierr = VecDestroy(&b);CHKERRQ(ierr);
159267877ebaSShri Abhyankar     break;
159367877ebaSShri Abhyankar   }
15943ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
15955cd7cf9dSHong Zhang   ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr);
159667877ebaSShri Abhyankar 
1597450b117fSShri Abhyankar   F->ops->lufactornumeric = MatFactorNumeric_MUMPS;
1598dcd589f8SShri Abhyankar   F->ops->solve           = MatSolve_MUMPS;
159951d5961aSHong Zhang   F->ops->solvetranspose  = MatSolveTranspose_MUMPS;
1600450b117fSShri Abhyankar   PetscFunctionReturn(0);
1601450b117fSShri Abhyankar }
1602b24902e0SBarry Smith 
1603141f4205SHong Zhang /* Note the Petsc r permutation and factor info are ignored */
160467877ebaSShri Abhyankar PetscErrorCode MatCholeskyFactorSymbolic_MUMPS(Mat F,Mat A,IS r,const MatFactorInfo *info)
1605b24902e0SBarry Smith {
1606e69c285eSBarry Smith   Mat_MUMPS      *mumps = (Mat_MUMPS*)F->data;
1607dcd589f8SShri Abhyankar   PetscErrorCode ierr;
160867877ebaSShri Abhyankar   Vec            b;
160967877ebaSShri Abhyankar   IS             is_iden;
161067877ebaSShri Abhyankar   const PetscInt M = A->rmap->N;
1611397b6df1SKris Buschelman 
1612397b6df1SKris Buschelman   PetscFunctionBegin;
1613a5e57a09SHong Zhang   mumps->matstruc = DIFFERENT_NONZERO_PATTERN;
1614dcd589f8SShri Abhyankar 
16159a2535b5SHong Zhang   /* Set MUMPS options from the options database */
16169a2535b5SHong Zhang   ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr);
1617dcd589f8SShri Abhyankar 
1618a5e57a09SHong Zhang   ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr);
16193ab56b82SJunchao Zhang   ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr);
1620dcd589f8SShri Abhyankar 
162167877ebaSShri Abhyankar   /* analysis phase */
162267877ebaSShri Abhyankar   /*----------------*/
1623a5e57a09SHong Zhang   mumps->id.job = JOB_FACTSYMBOLIC;
1624a5e57a09SHong Zhang   mumps->id.n   = M;
1625a5e57a09SHong Zhang   switch (mumps->id.ICNTL(18)) {
162667877ebaSShri Abhyankar   case 0:  /* centralized assembled matrix input */
1627a5e57a09SHong Zhang     if (!mumps->myid) {
1628a5e57a09SHong Zhang       mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn;
1629a5e57a09SHong Zhang       if (mumps->id.ICNTL(6)>1) {
1630940cd9d6SSatish Balay         mumps->id.a = (MumpsScalar*)mumps->val;
163167877ebaSShri Abhyankar       }
163267877ebaSShri Abhyankar     }
163367877ebaSShri Abhyankar     break;
163467877ebaSShri Abhyankar   case 3:  /* distributed assembled matrix input (size>1) */
1635a5e57a09SHong Zhang     mumps->id.nz_loc = mumps->nz;
1636a5e57a09SHong Zhang     mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn;
1637a5e57a09SHong Zhang     if (mumps->id.ICNTL(6)>1) {
1638940cd9d6SSatish Balay       mumps->id.a_loc = (MumpsScalar*)mumps->val;
163967877ebaSShri Abhyankar     }
164067877ebaSShri Abhyankar     /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */
1641a5e57a09SHong Zhang     if (!mumps->myid) {
1642a5e57a09SHong Zhang       ierr = VecCreateSeq(PETSC_COMM_SELF,A->cmap->N,&mumps->b_seq);CHKERRQ(ierr);
164367877ebaSShri Abhyankar       ierr = ISCreateStride(PETSC_COMM_SELF,A->cmap->N,0,1,&is_iden);CHKERRQ(ierr);
164467877ebaSShri Abhyankar     } else {
1645a5e57a09SHong Zhang       ierr = VecCreateSeq(PETSC_COMM_SELF,0,&mumps->b_seq);CHKERRQ(ierr);
164667877ebaSShri Abhyankar       ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_iden);CHKERRQ(ierr);
164767877ebaSShri Abhyankar     }
16482a7a6963SBarry Smith     ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr);
1649*35928de7SBarry Smith     ierr = VecScatterCreateWithData(b,is_iden,mumps->b_seq,is_iden,&mumps->scat_rhs);CHKERRQ(ierr);
16506bf464f9SBarry Smith     ierr = ISDestroy(&is_iden);CHKERRQ(ierr);
16516bf464f9SBarry Smith     ierr = VecDestroy(&b);CHKERRQ(ierr);
165267877ebaSShri Abhyankar     break;
165367877ebaSShri Abhyankar   }
16543ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
16555cd7cf9dSHong Zhang   ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr);
16565cd7cf9dSHong Zhang 
16572792810eSHong Zhang   F->ops->choleskyfactornumeric = MatFactorNumeric_MUMPS;
1658dcd589f8SShri Abhyankar   F->ops->solve                 = MatSolve_MUMPS;
165951d5961aSHong Zhang   F->ops->solvetranspose        = MatSolve_MUMPS;
16604e34a73bSHong Zhang   F->ops->matsolve              = MatMatSolve_MUMPS;
16614e34a73bSHong Zhang #if defined(PETSC_USE_COMPLEX)
16620298fd71SBarry Smith   F->ops->getinertia = NULL;
16634e34a73bSHong Zhang #else
16644e34a73bSHong Zhang   F->ops->getinertia = MatGetInertia_SBAIJMUMPS;
1665db4efbfdSBarry Smith #endif
1666b24902e0SBarry Smith   PetscFunctionReturn(0);
1667b24902e0SBarry Smith }
1668b24902e0SBarry Smith 
166964e6c443SBarry Smith PetscErrorCode MatView_MUMPS(Mat A,PetscViewer viewer)
167074ed9c26SBarry Smith {
1671f6c57405SHong Zhang   PetscErrorCode    ierr;
167264e6c443SBarry Smith   PetscBool         iascii;
167364e6c443SBarry Smith   PetscViewerFormat format;
1674e69c285eSBarry Smith   Mat_MUMPS         *mumps=(Mat_MUMPS*)A->data;
1675f6c57405SHong Zhang 
1676f6c57405SHong Zhang   PetscFunctionBegin;
167764e6c443SBarry Smith   /* check if matrix is mumps type */
167864e6c443SBarry Smith   if (A->ops->solve != MatSolve_MUMPS) PetscFunctionReturn(0);
167964e6c443SBarry Smith 
1680251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
168164e6c443SBarry Smith   if (iascii) {
168264e6c443SBarry Smith     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
168364e6c443SBarry Smith     if (format == PETSC_VIEWER_ASCII_INFO) {
168464e6c443SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"MUMPS run parameters:\n");CHKERRQ(ierr);
1685a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  SYM (matrix type):                   %d \n",mumps->id.sym);CHKERRQ(ierr);
1686a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  PAR (host participation):            %d \n",mumps->id.par);CHKERRQ(ierr);
1687a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(1) (output for error):         %d \n",mumps->id.ICNTL(1));CHKERRQ(ierr);
1688a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(2) (output of diagnostic msg): %d \n",mumps->id.ICNTL(2));CHKERRQ(ierr);
1689a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(3) (output for global info):   %d \n",mumps->id.ICNTL(3));CHKERRQ(ierr);
1690a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(4) (level of printing):        %d \n",mumps->id.ICNTL(4));CHKERRQ(ierr);
1691a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(5) (input mat struct):         %d \n",mumps->id.ICNTL(5));CHKERRQ(ierr);
1692a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(6) (matrix prescaling):        %d \n",mumps->id.ICNTL(6));CHKERRQ(ierr);
1693d4ed72bbSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(7) (sequential matrix ordering):%d \n",mumps->id.ICNTL(7));CHKERRQ(ierr);
1694d4ed72bbSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(8) (scaling strategy):        %d \n",mumps->id.ICNTL(8));CHKERRQ(ierr);
1695a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(10) (max num of refinements):  %d \n",mumps->id.ICNTL(10));CHKERRQ(ierr);
1696a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(11) (error analysis):          %d \n",mumps->id.ICNTL(11));CHKERRQ(ierr);
1697a5e57a09SHong Zhang       if (mumps->id.ICNTL(11)>0) {
1698a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"    RINFOG(4) (inf norm of input mat):        %g\n",mumps->id.RINFOG(4));CHKERRQ(ierr);
1699a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"    RINFOG(5) (inf norm of solution):         %g\n",mumps->id.RINFOG(5));CHKERRQ(ierr);
1700a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"    RINFOG(6) (inf norm of residual):         %g\n",mumps->id.RINFOG(6));CHKERRQ(ierr);
1701a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"    RINFOG(7),RINFOG(8) (backward error est): %g, %g\n",mumps->id.RINFOG(7),mumps->id.RINFOG(8));CHKERRQ(ierr);
1702a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"    RINFOG(9) (error estimate):               %g \n",mumps->id.RINFOG(9));CHKERRQ(ierr);
1703a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"    RINFOG(10),RINFOG(11)(condition numbers): %g, %g\n",mumps->id.RINFOG(10),mumps->id.RINFOG(11));CHKERRQ(ierr);
1704f6c57405SHong Zhang       }
1705a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(12) (efficiency control):                         %d \n",mumps->id.ICNTL(12));CHKERRQ(ierr);
1706a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(13) (efficiency control):                         %d \n",mumps->id.ICNTL(13));CHKERRQ(ierr);
1707a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(14) (percentage of estimated workspace increase): %d \n",mumps->id.ICNTL(14));CHKERRQ(ierr);
1708f6c57405SHong Zhang       /* ICNTL(15-17) not used */
1709a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(18) (input mat struct):                           %d \n",mumps->id.ICNTL(18));CHKERRQ(ierr);
1710d4ed72bbSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(19) (Schur complement info):                      %d \n",mumps->id.ICNTL(19));CHKERRQ(ierr);
1711a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(20) (rhs sparse pattern):                         %d \n",mumps->id.ICNTL(20));CHKERRQ(ierr);
1712ca3dc52bSPierre Jolivet       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(21) (solution struct):                            %d \n",mumps->id.ICNTL(21));CHKERRQ(ierr);
1713a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(22) (in-core/out-of-core facility):               %d \n",mumps->id.ICNTL(22));CHKERRQ(ierr);
1714a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(23) (max size of memory can be allocated locally):%d \n",mumps->id.ICNTL(23));CHKERRQ(ierr);
1715c0165424SHong Zhang 
1716a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(24) (detection of null pivot rows):               %d \n",mumps->id.ICNTL(24));CHKERRQ(ierr);
1717a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(25) (computation of a null space basis):          %d \n",mumps->id.ICNTL(25));CHKERRQ(ierr);
1718a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(26) (Schur options for rhs or solution):          %d \n",mumps->id.ICNTL(26));CHKERRQ(ierr);
1719a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(27) (experimental parameter):                     %d \n",mumps->id.ICNTL(27));CHKERRQ(ierr);
1720a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(28) (use parallel or sequential ordering):        %d \n",mumps->id.ICNTL(28));CHKERRQ(ierr);
1721a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(29) (parallel ordering):                          %d \n",mumps->id.ICNTL(29));CHKERRQ(ierr);
172242179a6aSHong Zhang 
1723a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(30) (user-specified set of entries in inv(A)):    %d \n",mumps->id.ICNTL(30));CHKERRQ(ierr);
1724a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(31) (factors is discarded in the solve phase):    %d \n",mumps->id.ICNTL(31));CHKERRQ(ierr);
1725a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(33) (compute determinant):                        %d \n",mumps->id.ICNTL(33));CHKERRQ(ierr);
17266e32de5dSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(35) (activate BLR based factorization):           %d \n",mumps->id.ICNTL(35));CHKERRQ(ierr);
1727f6c57405SHong Zhang 
1728a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  CNTL(1) (relative pivoting threshold):      %g \n",mumps->id.CNTL(1));CHKERRQ(ierr);
1729a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  CNTL(2) (stopping criterion of refinement): %g \n",mumps->id.CNTL(2));CHKERRQ(ierr);
1730ca3dc52bSPierre Jolivet       ierr = PetscViewerASCIIPrintf(viewer,"  CNTL(3) (absolute pivoting threshold):      %g \n",mumps->id.CNTL(3));CHKERRQ(ierr);
1731ca3dc52bSPierre Jolivet       ierr = PetscViewerASCIIPrintf(viewer,"  CNTL(4) (value of static pivoting):         %g \n",mumps->id.CNTL(4));CHKERRQ(ierr);
1732a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  CNTL(5) (fixation for null pivots):         %g \n",mumps->id.CNTL(5));CHKERRQ(ierr);
17336e32de5dSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  CNTL(7) (dropping parameter for BLR):       %g \n",mumps->id.CNTL(7));CHKERRQ(ierr);
1734f6c57405SHong Zhang 
1735f6c57405SHong Zhang       /* infomation local to each processor */
173634ed7027SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer, "  RINFO(1) (local estimated flops for the elimination after analysis): \n");CHKERRQ(ierr);
17371575c14dSBarry Smith       ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr);
1738a5e57a09SHong Zhang       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"    [%d] %g \n",mumps->myid,mumps->id.RINFO(1));CHKERRQ(ierr);
17392a808120SBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
174034ed7027SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer, "  RINFO(2) (local estimated flops for the assembly after factorization): \n");CHKERRQ(ierr);
1741a5e57a09SHong Zhang       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"    [%d]  %g \n",mumps->myid,mumps->id.RINFO(2));CHKERRQ(ierr);
17422a808120SBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
174334ed7027SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer, "  RINFO(3) (local estimated flops for the elimination after factorization): \n");CHKERRQ(ierr);
1744a5e57a09SHong Zhang       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"    [%d]  %g \n",mumps->myid,mumps->id.RINFO(3));CHKERRQ(ierr);
17452a808120SBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
1746f6c57405SHong Zhang 
174734ed7027SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer, "  INFO(15) (estimated size of (in MB) MUMPS internal data for running numerical factorization): \n");CHKERRQ(ierr);
1748a5e57a09SHong Zhang       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"  [%d] %d \n",mumps->myid,mumps->id.INFO(15));CHKERRQ(ierr);
17492a808120SBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
1750f6c57405SHong Zhang 
175134ed7027SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer, "  INFO(16) (size of (in MB) MUMPS internal data used during numerical factorization): \n");CHKERRQ(ierr);
1752a5e57a09SHong Zhang       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"    [%d] %d \n",mumps->myid,mumps->id.INFO(16));CHKERRQ(ierr);
17532a808120SBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
1754f6c57405SHong Zhang 
175534ed7027SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer, "  INFO(23) (num of pivots eliminated on this processor after factorization): \n");CHKERRQ(ierr);
1756a5e57a09SHong Zhang       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"    [%d] %d \n",mumps->myid,mumps->id.INFO(23));CHKERRQ(ierr);
17572a808120SBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
1758b34f08ffSHong Zhang 
1759b34f08ffSHong Zhang       if (mumps->ninfo && mumps->ninfo <= 40){
1760b34f08ffSHong Zhang         PetscInt i;
1761b34f08ffSHong Zhang         for (i=0; i<mumps->ninfo; i++){
1762b34f08ffSHong Zhang           ierr = PetscViewerASCIIPrintf(viewer, "  INFO(%d): \n",mumps->info[i]);CHKERRQ(ierr);
1763b34f08ffSHong Zhang           ierr = PetscViewerASCIISynchronizedPrintf(viewer,"    [%d] %d \n",mumps->myid,mumps->id.INFO(mumps->info[i]));CHKERRQ(ierr);
17642a808120SBarry Smith           ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
1765b34f08ffSHong Zhang         }
1766b34f08ffSHong Zhang       }
17671575c14dSBarry Smith       ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr);
1768f6c57405SHong Zhang 
1769a5e57a09SHong Zhang       if (!mumps->myid) { /* information from the host */
1770a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  RINFOG(1) (global estimated flops for the elimination after analysis): %g \n",mumps->id.RINFOG(1));CHKERRQ(ierr);
1771a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  RINFOG(2) (global estimated flops for the assembly after factorization): %g \n",mumps->id.RINFOG(2));CHKERRQ(ierr);
1772a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  RINFOG(3) (global estimated flops for the elimination after factorization): %g \n",mumps->id.RINFOG(3));CHKERRQ(ierr);
1773a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  (RINFOG(12) RINFOG(13))*2^INFOG(34) (determinant): (%g,%g)*(2^%d)\n",mumps->id.RINFOG(12),mumps->id.RINFOG(13),mumps->id.INFOG(34));CHKERRQ(ierr);
1774f6c57405SHong Zhang 
1775a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(3) (estimated real workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(3));CHKERRQ(ierr);
1776a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(4) (estimated integer workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(4));CHKERRQ(ierr);
1777a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(5) (estimated maximum front size in the complete tree): %d \n",mumps->id.INFOG(5));CHKERRQ(ierr);
1778a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(6) (number of nodes in the complete tree): %d \n",mumps->id.INFOG(6));CHKERRQ(ierr);
1779a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(7) (ordering option effectively use after analysis): %d \n",mumps->id.INFOG(7));CHKERRQ(ierr);
1780a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(8) (structural symmetry in percent of the permuted matrix after analysis): %d \n",mumps->id.INFOG(8));CHKERRQ(ierr);
1781a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(9) (total real/complex workspace to store the matrix factors after factorization): %d \n",mumps->id.INFOG(9));CHKERRQ(ierr);
1782a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(10) (total integer space store the matrix factors after factorization): %d \n",mumps->id.INFOG(10));CHKERRQ(ierr);
1783a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(11) (order of largest frontal matrix after factorization): %d \n",mumps->id.INFOG(11));CHKERRQ(ierr);
1784a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(12) (number of off-diagonal pivots): %d \n",mumps->id.INFOG(12));CHKERRQ(ierr);
1785a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(13) (number of delayed pivots after factorization): %d \n",mumps->id.INFOG(13));CHKERRQ(ierr);
1786a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(14) (number of memory compress after factorization): %d \n",mumps->id.INFOG(14));CHKERRQ(ierr);
1787a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(15) (number of steps of iterative refinement after solution): %d \n",mumps->id.INFOG(15));CHKERRQ(ierr);
1788a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(16) (estimated size (in MB) of all MUMPS internal data for factorization after analysis: value on the most memory consuming processor): %d \n",mumps->id.INFOG(16));CHKERRQ(ierr);
1789a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(17) (estimated size of all MUMPS internal data for factorization after analysis: sum over all processors): %d \n",mumps->id.INFOG(17));CHKERRQ(ierr);
1790a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(18) (size of all MUMPS internal data allocated during factorization: value on the most memory consuming processor): %d \n",mumps->id.INFOG(18));CHKERRQ(ierr);
1791a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(19) (size of all MUMPS internal data allocated during factorization: sum over all processors): %d \n",mumps->id.INFOG(19));CHKERRQ(ierr);
1792a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(20) (estimated number of entries in the factors): %d \n",mumps->id.INFOG(20));CHKERRQ(ierr);
1793a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(21) (size in MB of memory effectively used during factorization - value on the most memory consuming processor): %d \n",mumps->id.INFOG(21));CHKERRQ(ierr);
1794a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(22) (size in MB of memory effectively used during factorization - sum over all processors): %d \n",mumps->id.INFOG(22));CHKERRQ(ierr);
1795a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(23) (after analysis: value of ICNTL(6) effectively used): %d \n",mumps->id.INFOG(23));CHKERRQ(ierr);
1796a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(24) (after analysis: value of ICNTL(12) effectively used): %d \n",mumps->id.INFOG(24));CHKERRQ(ierr);
1797a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(25) (after factorization: number of pivots modified by static pivoting): %d \n",mumps->id.INFOG(25));CHKERRQ(ierr);
179840d435e3SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(28) (after factorization: number of null pivots encountered): %d\n",mumps->id.INFOG(28));CHKERRQ(ierr);
179940d435e3SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(29) (after factorization: effective number of entries in the factors (sum over all processors)): %d\n",mumps->id.INFOG(29));CHKERRQ(ierr);
180040d435e3SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(30, 31) (after solution: size in Mbytes of memory used during solution phase): %d, %d\n",mumps->id.INFOG(30),mumps->id.INFOG(31));CHKERRQ(ierr);
180140d435e3SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(32) (after analysis: type of analysis done): %d\n",mumps->id.INFOG(32));CHKERRQ(ierr);
180240d435e3SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(33) (value used for ICNTL(8)): %d\n",mumps->id.INFOG(33));CHKERRQ(ierr);
180340d435e3SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(34) (exponent of the determinant if determinant is requested): %d\n",mumps->id.INFOG(34));CHKERRQ(ierr);
1804f6c57405SHong Zhang       }
1805f6c57405SHong Zhang     }
1806cb828f0fSHong Zhang   }
1807f6c57405SHong Zhang   PetscFunctionReturn(0);
1808f6c57405SHong Zhang }
1809f6c57405SHong Zhang 
181035bd34faSBarry Smith PetscErrorCode MatGetInfo_MUMPS(Mat A,MatInfoType flag,MatInfo *info)
181135bd34faSBarry Smith {
1812e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)A->data;
181335bd34faSBarry Smith 
181435bd34faSBarry Smith   PetscFunctionBegin;
181535bd34faSBarry Smith   info->block_size        = 1.0;
1816cb828f0fSHong Zhang   info->nz_allocated      = mumps->id.INFOG(20);
1817cb828f0fSHong Zhang   info->nz_used           = mumps->id.INFOG(20);
181835bd34faSBarry Smith   info->nz_unneeded       = 0.0;
181935bd34faSBarry Smith   info->assemblies        = 0.0;
182035bd34faSBarry Smith   info->mallocs           = 0.0;
182135bd34faSBarry Smith   info->memory            = 0.0;
182235bd34faSBarry Smith   info->fill_ratio_given  = 0;
182335bd34faSBarry Smith   info->fill_ratio_needed = 0;
182435bd34faSBarry Smith   info->factor_mallocs    = 0;
182535bd34faSBarry Smith   PetscFunctionReturn(0);
182635bd34faSBarry Smith }
182735bd34faSBarry Smith 
18285ccb76cbSHong Zhang /* -------------------------------------------------------------------------------------------*/
18298e7ba810SStefano Zampini PetscErrorCode MatFactorSetSchurIS_MUMPS(Mat F, IS is)
18306444a565SStefano Zampini {
1831e69c285eSBarry Smith   Mat_MUMPS      *mumps =(Mat_MUMPS*)F->data;
18328e7ba810SStefano Zampini   const PetscInt *idxs;
18338e7ba810SStefano Zampini   PetscInt       size,i;
18346444a565SStefano Zampini   PetscErrorCode ierr;
18356444a565SStefano Zampini 
18366444a565SStefano Zampini   PetscFunctionBegin;
1837b3cb21ddSStefano Zampini   ierr = ISGetLocalSize(is,&size);CHKERRQ(ierr);
18382d4298aeSJunchao Zhang   if (mumps->petsc_size > 1) {
18393ab56b82SJunchao Zhang     PetscBool ls,gs; /* gs is false if any rank other than root has non-empty IS */
1840241dbb5eSStefano Zampini 
18413ab56b82SJunchao Zhang     ls   = mumps->myid ? (size ? PETSC_FALSE : PETSC_TRUE) : PETSC_TRUE; /* always true on root; false on others if their size != 0 */
18423ab56b82SJunchao Zhang     ierr = MPI_Allreduce(&ls,&gs,1,MPIU_BOOL,MPI_LAND,mumps->petsc_comm);CHKERRQ(ierr);
1843241dbb5eSStefano Zampini     if (!gs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MUMPS distributed parallel Schur complements not yet supported from PETSc\n");
1844241dbb5eSStefano Zampini   }
18456444a565SStefano Zampini   if (mumps->id.size_schur != size) {
18466444a565SStefano Zampini     ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr);
18476444a565SStefano Zampini     mumps->id.size_schur = size;
18486444a565SStefano Zampini     mumps->id.schur_lld  = size;
18496444a565SStefano Zampini     ierr = PetscMalloc2(size,&mumps->id.listvar_schur,size*size,&mumps->id.schur);CHKERRQ(ierr);
18506444a565SStefano Zampini   }
1851b3cb21ddSStefano Zampini 
1852b3cb21ddSStefano Zampini   /* Schur complement matrix */
1853b3cb21ddSStefano Zampini   ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.size_schur,(PetscScalar*)mumps->id.schur,&F->schur);CHKERRQ(ierr);
1854b3cb21ddSStefano Zampini   if (mumps->sym == 1) {
1855b3cb21ddSStefano Zampini     ierr = MatSetOption(F->schur,MAT_SPD,PETSC_TRUE);CHKERRQ(ierr);
1856b3cb21ddSStefano Zampini   }
1857b3cb21ddSStefano Zampini 
1858b3cb21ddSStefano Zampini   /* MUMPS expects Fortran style indices */
18598e7ba810SStefano Zampini   ierr = ISGetIndices(is,&idxs);CHKERRQ(ierr);
18606444a565SStefano Zampini   ierr = PetscMemcpy(mumps->id.listvar_schur,idxs,size*sizeof(PetscInt));CHKERRQ(ierr);
18618e7ba810SStefano Zampini   for (i=0;i<size;i++) mumps->id.listvar_schur[i]++;
18628e7ba810SStefano Zampini   ierr = ISRestoreIndices(is,&idxs);CHKERRQ(ierr);
18632d4298aeSJunchao Zhang   if (mumps->petsc_size > 1) {
1864241dbb5eSStefano Zampini     mumps->id.ICNTL(19) = 1; /* MUMPS returns Schur centralized on the host */
1865241dbb5eSStefano Zampini   } else {
18666444a565SStefano Zampini     if (F->factortype == MAT_FACTOR_LU) {
186759ac8732SStefano Zampini       mumps->id.ICNTL(19) = 3; /* MUMPS returns full matrix */
18686444a565SStefano Zampini     } else {
186959ac8732SStefano Zampini       mumps->id.ICNTL(19) = 2; /* MUMPS returns lower triangular part */
18706444a565SStefano Zampini     }
1871241dbb5eSStefano Zampini   }
187259ac8732SStefano Zampini   /* set a special value of ICNTL (not handled my MUMPS) to be used in the solve phase by PETSc */
1873b5fa320bSStefano Zampini   mumps->id.ICNTL(26) = -1;
18746444a565SStefano Zampini   PetscFunctionReturn(0);
18756444a565SStefano Zampini }
187659ac8732SStefano Zampini 
18776444a565SStefano Zampini /* -------------------------------------------------------------------------------------------*/
18785a05ddb0SStefano Zampini PetscErrorCode MatFactorCreateSchurComplement_MUMPS(Mat F,Mat* S)
18796444a565SStefano Zampini {
18806444a565SStefano Zampini   Mat            St;
1881e69c285eSBarry Smith   Mat_MUMPS      *mumps =(Mat_MUMPS*)F->data;
18826444a565SStefano Zampini   PetscScalar    *array;
18836444a565SStefano Zampini #if defined(PETSC_USE_COMPLEX)
18848ac429a0SStefano Zampini   PetscScalar    im = PetscSqrtScalar((PetscScalar)-1.0);
18856444a565SStefano Zampini #endif
18866444a565SStefano Zampini   PetscErrorCode ierr;
18876444a565SStefano Zampini 
18886444a565SStefano Zampini   PetscFunctionBegin;
18895a05ddb0SStefano Zampini   if (!mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it");
1890241dbb5eSStefano Zampini   ierr = MatCreate(PETSC_COMM_SELF,&St);CHKERRQ(ierr);
18916444a565SStefano Zampini   ierr = MatSetSizes(St,PETSC_DECIDE,PETSC_DECIDE,mumps->id.size_schur,mumps->id.size_schur);CHKERRQ(ierr);
18926444a565SStefano Zampini   ierr = MatSetType(St,MATDENSE);CHKERRQ(ierr);
18936444a565SStefano Zampini   ierr = MatSetUp(St);CHKERRQ(ierr);
18946444a565SStefano Zampini   ierr = MatDenseGetArray(St,&array);CHKERRQ(ierr);
189559ac8732SStefano Zampini   if (!mumps->sym) { /* MUMPS always return a full matrix */
18966444a565SStefano Zampini     if (mumps->id.ICNTL(19) == 1) { /* stored by rows */
18976444a565SStefano Zampini       PetscInt i,j,N=mumps->id.size_schur;
18986444a565SStefano Zampini       for (i=0;i<N;i++) {
18996444a565SStefano Zampini         for (j=0;j<N;j++) {
19006444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX)
19016444a565SStefano Zampini           PetscScalar val = mumps->id.schur[i*N+j];
19026444a565SStefano Zampini #else
19036444a565SStefano Zampini           PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i;
19046444a565SStefano Zampini #endif
19056444a565SStefano Zampini           array[j*N+i] = val;
19066444a565SStefano Zampini         }
19076444a565SStefano Zampini       }
19086444a565SStefano Zampini     } else { /* stored by columns */
19096444a565SStefano Zampini       ierr = PetscMemcpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur*sizeof(PetscScalar));CHKERRQ(ierr);
19106444a565SStefano Zampini     }
19116444a565SStefano Zampini   } else { /* either full or lower-triangular (not packed) */
19126444a565SStefano Zampini     if (mumps->id.ICNTL(19) == 2) { /* lower triangular stored by columns */
19136444a565SStefano Zampini       PetscInt i,j,N=mumps->id.size_schur;
19146444a565SStefano Zampini       for (i=0;i<N;i++) {
19156444a565SStefano Zampini         for (j=i;j<N;j++) {
19166444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX)
19176444a565SStefano Zampini           PetscScalar val = mumps->id.schur[i*N+j];
19186444a565SStefano Zampini #else
19196444a565SStefano Zampini           PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i;
19206444a565SStefano Zampini #endif
19216444a565SStefano Zampini           array[i*N+j] = val;
19226444a565SStefano Zampini           array[j*N+i] = val;
19236444a565SStefano Zampini         }
19246444a565SStefano Zampini       }
19256444a565SStefano Zampini     } else if (mumps->id.ICNTL(19) == 3) { /* full matrix */
19266444a565SStefano Zampini       ierr = PetscMemcpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur*sizeof(PetscScalar));CHKERRQ(ierr);
19276444a565SStefano Zampini     } else { /* ICNTL(19) == 1 lower triangular stored by rows */
19286444a565SStefano Zampini       PetscInt i,j,N=mumps->id.size_schur;
19296444a565SStefano Zampini       for (i=0;i<N;i++) {
19306444a565SStefano Zampini         for (j=0;j<i+1;j++) {
19316444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX)
19326444a565SStefano Zampini           PetscScalar val = mumps->id.schur[i*N+j];
19336444a565SStefano Zampini #else
19346444a565SStefano Zampini           PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i;
19356444a565SStefano Zampini #endif
19366444a565SStefano Zampini           array[i*N+j] = val;
19376444a565SStefano Zampini           array[j*N+i] = val;
19386444a565SStefano Zampini         }
19396444a565SStefano Zampini       }
19406444a565SStefano Zampini     }
19416444a565SStefano Zampini   }
19426444a565SStefano Zampini   ierr = MatDenseRestoreArray(St,&array);CHKERRQ(ierr);
19436444a565SStefano Zampini   *S   = St;
19446444a565SStefano Zampini   PetscFunctionReturn(0);
19456444a565SStefano Zampini }
19466444a565SStefano Zampini 
194759ac8732SStefano Zampini /* -------------------------------------------------------------------------------------------*/
19485ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt ival)
19495ccb76cbSHong Zhang {
1950e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
19515ccb76cbSHong Zhang 
19525ccb76cbSHong Zhang   PetscFunctionBegin;
1953a5e57a09SHong Zhang   mumps->id.ICNTL(icntl) = ival;
19545ccb76cbSHong Zhang   PetscFunctionReturn(0);
19555ccb76cbSHong Zhang }
19565ccb76cbSHong Zhang 
1957bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt *ival)
1958bc6112feSHong Zhang {
1959e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
1960bc6112feSHong Zhang 
1961bc6112feSHong Zhang   PetscFunctionBegin;
1962bc6112feSHong Zhang   *ival = mumps->id.ICNTL(icntl);
1963bc6112feSHong Zhang   PetscFunctionReturn(0);
1964bc6112feSHong Zhang }
1965bc6112feSHong Zhang 
19665ccb76cbSHong Zhang /*@
19675ccb76cbSHong Zhang   MatMumpsSetIcntl - Set MUMPS parameter ICNTL()
19685ccb76cbSHong Zhang 
19695ccb76cbSHong Zhang    Logically Collective on Mat
19705ccb76cbSHong Zhang 
19715ccb76cbSHong Zhang    Input Parameters:
19725ccb76cbSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
19735ccb76cbSHong Zhang .  icntl - index of MUMPS parameter array ICNTL()
19745ccb76cbSHong Zhang -  ival - value of MUMPS ICNTL(icntl)
19755ccb76cbSHong Zhang 
19765ccb76cbSHong Zhang   Options Database:
19775ccb76cbSHong Zhang .   -mat_mumps_icntl_<icntl> <ival>
19785ccb76cbSHong Zhang 
19795ccb76cbSHong Zhang    Level: beginner
19805ccb76cbSHong Zhang 
198196a0c994SBarry Smith    References:
198296a0c994SBarry Smith .     MUMPS Users' Guide
19835ccb76cbSHong Zhang 
19849fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
19855ccb76cbSHong Zhang  @*/
19865ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl(Mat F,PetscInt icntl,PetscInt ival)
19875ccb76cbSHong Zhang {
19885ccb76cbSHong Zhang   PetscErrorCode ierr;
19895ccb76cbSHong Zhang 
19905ccb76cbSHong Zhang   PetscFunctionBegin;
19912989dfd4SHong Zhang   PetscValidType(F,1);
19922989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
19935ccb76cbSHong Zhang   PetscValidLogicalCollectiveInt(F,icntl,2);
19945ccb76cbSHong Zhang   PetscValidLogicalCollectiveInt(F,ival,3);
19955ccb76cbSHong Zhang   ierr = PetscTryMethod(F,"MatMumpsSetIcntl_C",(Mat,PetscInt,PetscInt),(F,icntl,ival));CHKERRQ(ierr);
19965ccb76cbSHong Zhang   PetscFunctionReturn(0);
19975ccb76cbSHong Zhang }
19985ccb76cbSHong Zhang 
1999a21f80fcSHong Zhang /*@
2000a21f80fcSHong Zhang   MatMumpsGetIcntl - Get MUMPS parameter ICNTL()
2001a21f80fcSHong Zhang 
2002a21f80fcSHong Zhang    Logically Collective on Mat
2003a21f80fcSHong Zhang 
2004a21f80fcSHong Zhang    Input Parameters:
2005a21f80fcSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
2006a21f80fcSHong Zhang -  icntl - index of MUMPS parameter array ICNTL()
2007a21f80fcSHong Zhang 
2008a21f80fcSHong Zhang   Output Parameter:
2009a21f80fcSHong Zhang .  ival - value of MUMPS ICNTL(icntl)
2010a21f80fcSHong Zhang 
2011a21f80fcSHong Zhang    Level: beginner
2012a21f80fcSHong Zhang 
201396a0c994SBarry Smith    References:
201496a0c994SBarry Smith .     MUMPS Users' Guide
2015a21f80fcSHong Zhang 
20169fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
2017a21f80fcSHong Zhang @*/
2018bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl(Mat F,PetscInt icntl,PetscInt *ival)
2019bc6112feSHong Zhang {
2020bc6112feSHong Zhang   PetscErrorCode ierr;
2021bc6112feSHong Zhang 
2022bc6112feSHong Zhang   PetscFunctionBegin;
20232989dfd4SHong Zhang   PetscValidType(F,1);
20242989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
2025bc6112feSHong Zhang   PetscValidLogicalCollectiveInt(F,icntl,2);
2026bc6112feSHong Zhang   PetscValidIntPointer(ival,3);
20272989dfd4SHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetIcntl_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr);
2028bc6112feSHong Zhang   PetscFunctionReturn(0);
2029bc6112feSHong Zhang }
2030bc6112feSHong Zhang 
20318928b65cSHong Zhang /* -------------------------------------------------------------------------------------------*/
20328928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal val)
20338928b65cSHong Zhang {
2034e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
20358928b65cSHong Zhang 
20368928b65cSHong Zhang   PetscFunctionBegin;
20378928b65cSHong Zhang   mumps->id.CNTL(icntl) = val;
20388928b65cSHong Zhang   PetscFunctionReturn(0);
20398928b65cSHong Zhang }
20408928b65cSHong Zhang 
2041bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal *val)
2042bc6112feSHong Zhang {
2043e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
2044bc6112feSHong Zhang 
2045bc6112feSHong Zhang   PetscFunctionBegin;
2046bc6112feSHong Zhang   *val = mumps->id.CNTL(icntl);
2047bc6112feSHong Zhang   PetscFunctionReturn(0);
2048bc6112feSHong Zhang }
2049bc6112feSHong Zhang 
20508928b65cSHong Zhang /*@
20518928b65cSHong Zhang   MatMumpsSetCntl - Set MUMPS parameter CNTL()
20528928b65cSHong Zhang 
20538928b65cSHong Zhang    Logically Collective on Mat
20548928b65cSHong Zhang 
20558928b65cSHong Zhang    Input Parameters:
20568928b65cSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
20578928b65cSHong Zhang .  icntl - index of MUMPS parameter array CNTL()
20588928b65cSHong Zhang -  val - value of MUMPS CNTL(icntl)
20598928b65cSHong Zhang 
20608928b65cSHong Zhang   Options Database:
20618928b65cSHong Zhang .   -mat_mumps_cntl_<icntl> <val>
20628928b65cSHong Zhang 
20638928b65cSHong Zhang    Level: beginner
20648928b65cSHong Zhang 
206596a0c994SBarry Smith    References:
206696a0c994SBarry Smith .     MUMPS Users' Guide
20678928b65cSHong Zhang 
20689fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
20698928b65cSHong Zhang @*/
20708928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl(Mat F,PetscInt icntl,PetscReal val)
20718928b65cSHong Zhang {
20728928b65cSHong Zhang   PetscErrorCode ierr;
20738928b65cSHong Zhang 
20748928b65cSHong Zhang   PetscFunctionBegin;
20752989dfd4SHong Zhang   PetscValidType(F,1);
20762989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
20778928b65cSHong Zhang   PetscValidLogicalCollectiveInt(F,icntl,2);
2078bc6112feSHong Zhang   PetscValidLogicalCollectiveReal(F,val,3);
20798928b65cSHong Zhang   ierr = PetscTryMethod(F,"MatMumpsSetCntl_C",(Mat,PetscInt,PetscReal),(F,icntl,val));CHKERRQ(ierr);
20808928b65cSHong Zhang   PetscFunctionReturn(0);
20818928b65cSHong Zhang }
20828928b65cSHong Zhang 
2083a21f80fcSHong Zhang /*@
2084a21f80fcSHong Zhang   MatMumpsGetCntl - Get MUMPS parameter CNTL()
2085a21f80fcSHong Zhang 
2086a21f80fcSHong Zhang    Logically Collective on Mat
2087a21f80fcSHong Zhang 
2088a21f80fcSHong Zhang    Input Parameters:
2089a21f80fcSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
2090a21f80fcSHong Zhang -  icntl - index of MUMPS parameter array CNTL()
2091a21f80fcSHong Zhang 
2092a21f80fcSHong Zhang   Output Parameter:
2093a21f80fcSHong Zhang .  val - value of MUMPS CNTL(icntl)
2094a21f80fcSHong Zhang 
2095a21f80fcSHong Zhang    Level: beginner
2096a21f80fcSHong Zhang 
209796a0c994SBarry Smith    References:
209896a0c994SBarry Smith .      MUMPS Users' Guide
2099a21f80fcSHong Zhang 
21009fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
2101a21f80fcSHong Zhang @*/
2102bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl(Mat F,PetscInt icntl,PetscReal *val)
2103bc6112feSHong Zhang {
2104bc6112feSHong Zhang   PetscErrorCode ierr;
2105bc6112feSHong Zhang 
2106bc6112feSHong Zhang   PetscFunctionBegin;
21072989dfd4SHong Zhang   PetscValidType(F,1);
21082989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
2109bc6112feSHong Zhang   PetscValidLogicalCollectiveInt(F,icntl,2);
2110bc6112feSHong Zhang   PetscValidRealPointer(val,3);
21112989dfd4SHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetCntl_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr);
2112bc6112feSHong Zhang   PetscFunctionReturn(0);
2113bc6112feSHong Zhang }
2114bc6112feSHong Zhang 
2115ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo_MUMPS(Mat F,PetscInt icntl,PetscInt *info)
2116bc6112feSHong Zhang {
2117e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
2118bc6112feSHong Zhang 
2119bc6112feSHong Zhang   PetscFunctionBegin;
2120bc6112feSHong Zhang   *info = mumps->id.INFO(icntl);
2121bc6112feSHong Zhang   PetscFunctionReturn(0);
2122bc6112feSHong Zhang }
2123bc6112feSHong Zhang 
2124ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog_MUMPS(Mat F,PetscInt icntl,PetscInt *infog)
2125bc6112feSHong Zhang {
2126e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
2127bc6112feSHong Zhang 
2128bc6112feSHong Zhang   PetscFunctionBegin;
2129bc6112feSHong Zhang   *infog = mumps->id.INFOG(icntl);
2130bc6112feSHong Zhang   PetscFunctionReturn(0);
2131bc6112feSHong Zhang }
2132bc6112feSHong Zhang 
2133ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfo)
2134bc6112feSHong Zhang {
2135e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
2136bc6112feSHong Zhang 
2137bc6112feSHong Zhang   PetscFunctionBegin;
2138bc6112feSHong Zhang   *rinfo = mumps->id.RINFO(icntl);
2139bc6112feSHong Zhang   PetscFunctionReturn(0);
2140bc6112feSHong Zhang }
2141bc6112feSHong Zhang 
2142ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfog)
2143bc6112feSHong Zhang {
2144e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
2145bc6112feSHong Zhang 
2146bc6112feSHong Zhang   PetscFunctionBegin;
2147bc6112feSHong Zhang   *rinfog = mumps->id.RINFOG(icntl);
2148bc6112feSHong Zhang   PetscFunctionReturn(0);
2149bc6112feSHong Zhang }
2150bc6112feSHong Zhang 
215189a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse_MUMPS(Mat F,Mat spRHS)
2152bb599dfdSHong Zhang {
2153bb599dfdSHong Zhang   PetscErrorCode ierr;
21540e6b8875SHong Zhang   Mat            Bt = NULL,Btseq = NULL;
21550e6b8875SHong Zhang   PetscBool      flg;
2156bb599dfdSHong Zhang   Mat_MUMPS      *mumps =(Mat_MUMPS*)F->data;
2157bb599dfdSHong Zhang   PetscScalar    *aa;
2158bb599dfdSHong Zhang   PetscInt       spnr,*ia,*ja;
2159bb599dfdSHong Zhang 
2160bb599dfdSHong Zhang   PetscFunctionBegin;
2161e3f2db6aSHong Zhang   PetscValidIntPointer(spRHS,2);
21620e6b8875SHong Zhang   ierr = PetscObjectTypeCompare((PetscObject)spRHS,MATTRANSPOSEMAT,&flg);CHKERRQ(ierr);
21630e6b8875SHong Zhang   if (flg) {
2164bb599dfdSHong Zhang     ierr = MatTransposeGetMat(spRHS,&Bt);CHKERRQ(ierr);
21650e6b8875SHong Zhang   } else SETERRQ(PetscObjectComm((PetscObject)spRHS),PETSC_ERR_ARG_WRONG,"Matrix spRHS must be type MATTRANSPOSEMAT matrix");
2166bb599dfdSHong Zhang 
2167bb599dfdSHong Zhang   ierr = MatMumpsSetIcntl(F,30,1);CHKERRQ(ierr);
2168bb599dfdSHong Zhang 
21692d4298aeSJunchao Zhang   if (mumps->petsc_size > 1) {
21700e6b8875SHong Zhang     Mat_MPIAIJ *b = (Mat_MPIAIJ*)Bt->data;
21710e6b8875SHong Zhang     Btseq = b->A;
21720e6b8875SHong Zhang   } else {
21730e6b8875SHong Zhang     Btseq = Bt;
21740e6b8875SHong Zhang   }
21750e6b8875SHong Zhang 
2176e3f2db6aSHong Zhang   if (!mumps->myid) {
21770e6b8875SHong Zhang     ierr = MatSeqAIJGetArray(Btseq,&aa);CHKERRQ(ierr);
21780e6b8875SHong Zhang     ierr = MatGetRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr);
21790e6b8875SHong Zhang     if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure");
2180bb599dfdSHong Zhang 
2181bb599dfdSHong Zhang     mumps->id.irhs_ptr    = ia;
2182bb599dfdSHong Zhang     mumps->id.irhs_sparse = ja;
2183bb599dfdSHong Zhang     mumps->id.nz_rhs      = ia[spnr] - 1;
2184bb599dfdSHong Zhang     mumps->id.rhs_sparse  = (MumpsScalar*)aa;
2185e3f2db6aSHong Zhang   } else {
2186e3f2db6aSHong Zhang     mumps->id.irhs_ptr    = NULL;
2187e3f2db6aSHong Zhang     mumps->id.irhs_sparse = NULL;
2188e3f2db6aSHong Zhang     mumps->id.nz_rhs      = 0;
2189e3f2db6aSHong Zhang     mumps->id.rhs_sparse  = NULL;
2190e3f2db6aSHong Zhang   }
2191bb599dfdSHong Zhang   mumps->id.ICNTL(20)   = 1; /* rhs is sparse */
2192e3f2db6aSHong Zhang   mumps->id.ICNTL(21)   = 0; /* solution is in assembled centralized format */
2193bb599dfdSHong Zhang 
2194bb599dfdSHong Zhang   /* solve phase */
2195bb599dfdSHong Zhang   /*-------------*/
2196bb599dfdSHong Zhang   mumps->id.job = JOB_SOLVE;
21973ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
2198e3f2db6aSHong Zhang   if (mumps->id.INFOG(1) < 0)
2199e3f2db6aSHong Zhang     SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));
220014267174SHong Zhang 
2201e3f2db6aSHong Zhang   if (!mumps->myid) {
22020e6b8875SHong Zhang     ierr = MatSeqAIJRestoreArray(Btseq,&aa);CHKERRQ(ierr);
22030e6b8875SHong Zhang     ierr = MatRestoreRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr);
22040e6b8875SHong Zhang     if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure");
2205e3f2db6aSHong Zhang   }
2206bb599dfdSHong Zhang   PetscFunctionReturn(0);
2207bb599dfdSHong Zhang }
2208bb599dfdSHong Zhang 
2209bb599dfdSHong Zhang /*@
221089a9c03aSHong Zhang   MatMumpsGetInverse - Get user-specified set of entries in inverse of A
2211bb599dfdSHong Zhang 
2212bb599dfdSHong Zhang    Logically Collective on Mat
2213bb599dfdSHong Zhang 
2214bb599dfdSHong Zhang    Input Parameters:
2215bb599dfdSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
2216e3f2db6aSHong Zhang -  spRHS - sequential sparse matrix in MATTRANSPOSEMAT format holding specified indices in processor[0]
2217bb599dfdSHong Zhang 
2218bb599dfdSHong Zhang   Output Parameter:
2219e3f2db6aSHong Zhang . spRHS - requested entries of inverse of A
2220bb599dfdSHong Zhang 
2221bb599dfdSHong Zhang    Level: beginner
2222bb599dfdSHong Zhang 
2223bb599dfdSHong Zhang    References:
2224bb599dfdSHong Zhang .      MUMPS Users' Guide
2225bb599dfdSHong Zhang 
2226bb599dfdSHong Zhang .seealso: MatGetFactor(), MatCreateTranspose()
2227bb599dfdSHong Zhang @*/
222889a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse(Mat F,Mat spRHS)
2229bb599dfdSHong Zhang {
2230bb599dfdSHong Zhang   PetscErrorCode ierr;
2231bb599dfdSHong Zhang 
2232bb599dfdSHong Zhang   PetscFunctionBegin;
2233bb599dfdSHong Zhang   PetscValidType(F,1);
2234bb599dfdSHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
223589a9c03aSHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetInverse_C",(Mat,Mat),(F,spRHS));CHKERRQ(ierr);
2236bb599dfdSHong Zhang   PetscFunctionReturn(0);
2237bb599dfdSHong Zhang }
2238bb599dfdSHong Zhang 
22390e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose_MUMPS(Mat F,Mat spRHST)
22400e6b8875SHong Zhang {
22410e6b8875SHong Zhang   PetscErrorCode ierr;
22420e6b8875SHong Zhang   Mat            spRHS;
22430e6b8875SHong Zhang 
22440e6b8875SHong Zhang   PetscFunctionBegin;
22450e6b8875SHong Zhang   ierr = MatCreateTranspose(spRHST,&spRHS);CHKERRQ(ierr);
22460e6b8875SHong Zhang   ierr = MatMumpsGetInverse_MUMPS(F,spRHS);CHKERRQ(ierr);
22470e6b8875SHong Zhang   ierr = MatDestroy(&spRHS);CHKERRQ(ierr);
22480e6b8875SHong Zhang   PetscFunctionReturn(0);
22490e6b8875SHong Zhang }
22500e6b8875SHong Zhang 
22510e6b8875SHong Zhang /*@
2252eef1237cSHong Zhang   MatMumpsGetInverseTranspose - Get user-specified set of entries in inverse of matrix A^T
22530e6b8875SHong Zhang 
22540e6b8875SHong Zhang    Logically Collective on Mat
22550e6b8875SHong Zhang 
22560e6b8875SHong Zhang    Input Parameters:
22570e6b8875SHong Zhang +  F - the factored matrix of A obtained by calling MatGetFactor() from PETSc-MUMPS interface
22580e6b8875SHong Zhang -  spRHST - sequential sparse matrix in MATAIJ format holding specified indices of A^T in processor[0]
22590e6b8875SHong Zhang 
22600e6b8875SHong Zhang   Output Parameter:
22610e6b8875SHong Zhang . spRHST - requested entries of inverse of A^T
22620e6b8875SHong Zhang 
22630e6b8875SHong Zhang    Level: beginner
22640e6b8875SHong Zhang 
22650e6b8875SHong Zhang    References:
22660e6b8875SHong Zhang .      MUMPS Users' Guide
22670e6b8875SHong Zhang 
22680e6b8875SHong Zhang .seealso: MatGetFactor(), MatCreateTranspose(), MatMumpsGetInverse()
22690e6b8875SHong Zhang @*/
22700e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose(Mat F,Mat spRHST)
22710e6b8875SHong Zhang {
22720e6b8875SHong Zhang   PetscErrorCode ierr;
22730e6b8875SHong Zhang   PetscBool      flg;
22740e6b8875SHong Zhang 
22750e6b8875SHong Zhang   PetscFunctionBegin;
22760e6b8875SHong Zhang   PetscValidType(F,1);
22770e6b8875SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
22780e6b8875SHong Zhang   ierr = PetscObjectTypeCompareAny((PetscObject)spRHST,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr);
22790e6b8875SHong Zhang   if (!flg) SETERRQ(PetscObjectComm((PetscObject)spRHST),PETSC_ERR_ARG_WRONG,"Matrix spRHST must be MATAIJ matrix");
22800e6b8875SHong Zhang 
22810e6b8875SHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetInverseTranspose_C",(Mat,Mat),(F,spRHST));CHKERRQ(ierr);
22820e6b8875SHong Zhang   PetscFunctionReturn(0);
22830e6b8875SHong Zhang }
22840e6b8875SHong Zhang 
2285a21f80fcSHong Zhang /*@
2286a21f80fcSHong Zhang   MatMumpsGetInfo - Get MUMPS parameter INFO()
2287a21f80fcSHong Zhang 
2288a21f80fcSHong Zhang    Logically Collective on Mat
2289a21f80fcSHong Zhang 
2290a21f80fcSHong Zhang    Input Parameters:
2291a21f80fcSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
2292a21f80fcSHong Zhang -  icntl - index of MUMPS parameter array INFO()
2293a21f80fcSHong Zhang 
2294a21f80fcSHong Zhang   Output Parameter:
2295a21f80fcSHong Zhang .  ival - value of MUMPS INFO(icntl)
2296a21f80fcSHong Zhang 
2297a21f80fcSHong Zhang    Level: beginner
2298a21f80fcSHong Zhang 
229996a0c994SBarry Smith    References:
230096a0c994SBarry Smith .      MUMPS Users' Guide
2301a21f80fcSHong Zhang 
23029fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
2303a21f80fcSHong Zhang @*/
2304ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo(Mat F,PetscInt icntl,PetscInt *ival)
2305bc6112feSHong Zhang {
2306bc6112feSHong Zhang   PetscErrorCode ierr;
2307bc6112feSHong Zhang 
2308bc6112feSHong Zhang   PetscFunctionBegin;
23092989dfd4SHong Zhang   PetscValidType(F,1);
23102989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
2311ca810319SHong Zhang   PetscValidIntPointer(ival,3);
23122989dfd4SHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetInfo_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr);
2313bc6112feSHong Zhang   PetscFunctionReturn(0);
2314bc6112feSHong Zhang }
2315bc6112feSHong Zhang 
2316a21f80fcSHong Zhang /*@
2317a21f80fcSHong Zhang   MatMumpsGetInfog - Get MUMPS parameter INFOG()
2318a21f80fcSHong Zhang 
2319a21f80fcSHong Zhang    Logically Collective on Mat
2320a21f80fcSHong Zhang 
2321a21f80fcSHong Zhang    Input Parameters:
2322a21f80fcSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
2323a21f80fcSHong Zhang -  icntl - index of MUMPS parameter array INFOG()
2324a21f80fcSHong Zhang 
2325a21f80fcSHong Zhang   Output Parameter:
2326a21f80fcSHong Zhang .  ival - value of MUMPS INFOG(icntl)
2327a21f80fcSHong Zhang 
2328a21f80fcSHong Zhang    Level: beginner
2329a21f80fcSHong Zhang 
233096a0c994SBarry Smith    References:
233196a0c994SBarry Smith .      MUMPS Users' Guide
2332a21f80fcSHong Zhang 
23339fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
2334a21f80fcSHong Zhang @*/
2335ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog(Mat F,PetscInt icntl,PetscInt *ival)
2336bc6112feSHong Zhang {
2337bc6112feSHong Zhang   PetscErrorCode ierr;
2338bc6112feSHong Zhang 
2339bc6112feSHong Zhang   PetscFunctionBegin;
23402989dfd4SHong Zhang   PetscValidType(F,1);
23412989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
2342ca810319SHong Zhang   PetscValidIntPointer(ival,3);
23432989dfd4SHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetInfog_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr);
2344bc6112feSHong Zhang   PetscFunctionReturn(0);
2345bc6112feSHong Zhang }
2346bc6112feSHong Zhang 
2347a21f80fcSHong Zhang /*@
2348a21f80fcSHong Zhang   MatMumpsGetRinfo - Get MUMPS parameter RINFO()
2349a21f80fcSHong Zhang 
2350a21f80fcSHong Zhang    Logically Collective on Mat
2351a21f80fcSHong Zhang 
2352a21f80fcSHong Zhang    Input Parameters:
2353a21f80fcSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
2354a21f80fcSHong Zhang -  icntl - index of MUMPS parameter array RINFO()
2355a21f80fcSHong Zhang 
2356a21f80fcSHong Zhang   Output Parameter:
2357a21f80fcSHong Zhang .  val - value of MUMPS RINFO(icntl)
2358a21f80fcSHong Zhang 
2359a21f80fcSHong Zhang    Level: beginner
2360a21f80fcSHong Zhang 
236196a0c994SBarry Smith    References:
236296a0c994SBarry Smith .       MUMPS Users' Guide
2363a21f80fcSHong Zhang 
23649fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
2365a21f80fcSHong Zhang @*/
2366ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo(Mat F,PetscInt icntl,PetscReal *val)
2367bc6112feSHong Zhang {
2368bc6112feSHong Zhang   PetscErrorCode ierr;
2369bc6112feSHong Zhang 
2370bc6112feSHong Zhang   PetscFunctionBegin;
23712989dfd4SHong Zhang   PetscValidType(F,1);
23722989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
2373bc6112feSHong Zhang   PetscValidRealPointer(val,3);
23742989dfd4SHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetRinfo_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr);
2375bc6112feSHong Zhang   PetscFunctionReturn(0);
2376bc6112feSHong Zhang }
2377bc6112feSHong Zhang 
2378a21f80fcSHong Zhang /*@
2379a21f80fcSHong Zhang   MatMumpsGetRinfog - Get MUMPS parameter RINFOG()
2380a21f80fcSHong Zhang 
2381a21f80fcSHong Zhang    Logically Collective on Mat
2382a21f80fcSHong Zhang 
2383a21f80fcSHong Zhang    Input Parameters:
2384a21f80fcSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
2385a21f80fcSHong Zhang -  icntl - index of MUMPS parameter array RINFOG()
2386a21f80fcSHong Zhang 
2387a21f80fcSHong Zhang   Output Parameter:
2388a21f80fcSHong Zhang .  val - value of MUMPS RINFOG(icntl)
2389a21f80fcSHong Zhang 
2390a21f80fcSHong Zhang    Level: beginner
2391a21f80fcSHong Zhang 
239296a0c994SBarry Smith    References:
239396a0c994SBarry Smith .      MUMPS Users' Guide
2394a21f80fcSHong Zhang 
23959fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
2396a21f80fcSHong Zhang @*/
2397ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog(Mat F,PetscInt icntl,PetscReal *val)
2398bc6112feSHong Zhang {
2399bc6112feSHong Zhang   PetscErrorCode ierr;
2400bc6112feSHong Zhang 
2401bc6112feSHong Zhang   PetscFunctionBegin;
24022989dfd4SHong Zhang   PetscValidType(F,1);
24032989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
2404bc6112feSHong Zhang   PetscValidRealPointer(val,3);
24052989dfd4SHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetRinfog_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr);
2406bc6112feSHong Zhang   PetscFunctionReturn(0);
2407bc6112feSHong Zhang }
2408bc6112feSHong Zhang 
240924b6179bSKris Buschelman /*MC
24102692d6eeSBarry Smith   MATSOLVERMUMPS -  A matrix type providing direct solvers (LU and Cholesky) for
241124b6179bSKris Buschelman   distributed and sequential matrices via the external package MUMPS.
241224b6179bSKris Buschelman 
241341c8de11SBarry Smith   Works with MATAIJ and MATSBAIJ matrices
241424b6179bSKris Buschelman 
2415c2b89b5dSBarry Smith   Use ./configure --download-mumps --download-scalapack --download-parmetis --download-metis --download-ptscotch  to have PETSc installed with MUMPS
2416c2b89b5dSBarry Smith 
2417217d3b1eSJunchao Zhang   Use ./configure --with-openmp --download-hwloc (or --with-hwloc) to enable running MUMPS in MPI+OpenMP hybrid mode and non-MUMPS in flat-MPI mode. See details below.
2418217d3b1eSJunchao Zhang 
24193ca39a21SBarry Smith   Use -pc_type cholesky or lu -pc_factor_mat_solver_type mumps to use this direct solver
2420c2b89b5dSBarry Smith 
242124b6179bSKris Buschelman   Options Database Keys:
24224422a9fcSPatrick Sanan +  -mat_mumps_icntl_1 - ICNTL(1): output stream for error messages
24234422a9fcSPatrick Sanan .  -mat_mumps_icntl_2 - ICNTL(2): output stream for diagnostic printing, statistics, and warning
24244422a9fcSPatrick Sanan .  -mat_mumps_icntl_3 -  ICNTL(3): output stream for global information, collected on the host
24254422a9fcSPatrick Sanan .  -mat_mumps_icntl_4 -  ICNTL(4): level of printing (0 to 4)
24264422a9fcSPatrick Sanan .  -mat_mumps_icntl_6 - ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7)
24274422a9fcSPatrick Sanan .  -mat_mumps_icntl_7 - ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis
24284422a9fcSPatrick Sanan .  -mat_mumps_icntl_8  - ICNTL(8): scaling strategy (-2 to 8 or 77)
24294422a9fcSPatrick Sanan .  -mat_mumps_icntl_10  - ICNTL(10): max num of refinements
24304422a9fcSPatrick Sanan .  -mat_mumps_icntl_11  - ICNTL(11): statistics related to an error analysis (via -ksp_view)
24314422a9fcSPatrick Sanan .  -mat_mumps_icntl_12  - ICNTL(12): an ordering strategy for symmetric matrices (0 to 3)
24324422a9fcSPatrick Sanan .  -mat_mumps_icntl_13  - ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting
24334422a9fcSPatrick Sanan .  -mat_mumps_icntl_14  - ICNTL(14): percentage increase in the estimated working space
24344422a9fcSPatrick Sanan .  -mat_mumps_icntl_19  - ICNTL(19): computes the Schur complement
24354422a9fcSPatrick Sanan .  -mat_mumps_icntl_22  - ICNTL(22): in-core/out-of-core factorization and solve (0 or 1)
24364422a9fcSPatrick Sanan .  -mat_mumps_icntl_23  - ICNTL(23): max size of the working memory (MB) that can allocate per processor
24374422a9fcSPatrick Sanan .  -mat_mumps_icntl_24  - ICNTL(24): detection of null pivot rows (0 or 1)
24384422a9fcSPatrick Sanan .  -mat_mumps_icntl_25  - ICNTL(25): compute a solution of a deficient matrix and a null space basis
24394422a9fcSPatrick Sanan .  -mat_mumps_icntl_26  - ICNTL(26): drives the solution phase if a Schur complement matrix
24404422a9fcSPatrick Sanan .  -mat_mumps_icntl_28  - ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering
24414422a9fcSPatrick Sanan .  -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis
24424422a9fcSPatrick Sanan .  -mat_mumps_icntl_30 - ICNTL(30): compute user-specified set of entries in inv(A)
24434422a9fcSPatrick Sanan .  -mat_mumps_icntl_31 - ICNTL(31): indicates which factors may be discarded during factorization
24444422a9fcSPatrick Sanan .  -mat_mumps_icntl_33 - ICNTL(33): compute determinant
24454422a9fcSPatrick Sanan .  -mat_mumps_cntl_1  - CNTL(1): relative pivoting threshold
24464422a9fcSPatrick Sanan .  -mat_mumps_cntl_2  -  CNTL(2): stopping criterion of refinement
24474422a9fcSPatrick Sanan .  -mat_mumps_cntl_3 - CNTL(3): absolute pivoting threshold
24484422a9fcSPatrick Sanan .  -mat_mumps_cntl_4 - CNTL(4): value for static pivoting
2449217d3b1eSJunchao Zhang .  -mat_mumps_cntl_5 - CNTL(5): fixation for null pivots
2450217d3b1eSJunchao Zhang -  -mat_mumps_use_omp_threads [m] - run MUMPS in MPI+OpenMP hybrid mode as if omp_set_num_threads(m) is called before calling MUMPS.
2451217d3b1eSJunchao Zhang                                    Default might be the number of cores per CPU package (socket) as reported by hwloc and suggested by the MUMPS manual.
245224b6179bSKris Buschelman 
245324b6179bSKris Buschelman   Level: beginner
245424b6179bSKris Buschelman 
245595452b02SPatrick Sanan     Notes:
245695452b02SPatrick Sanan     When a MUMPS factorization fails inside a KSP solve, for example with a KSP_DIVERGED_PCSETUP_FAILED, one can find the MUMPS information about the failure by calling
24579fc87aa7SBarry Smith $          KSPGetPC(ksp,&pc);
24589fc87aa7SBarry Smith $          PCFactorGetMatrix(pc,&mat);
24599fc87aa7SBarry Smith $          MatMumpsGetInfo(mat,....);
24609fc87aa7SBarry Smith $          MatMumpsGetInfog(mat,....); etc.
24619fc87aa7SBarry Smith            Or you can run with -ksp_error_if_not_converged and the program will be stopped and the information printed in the error message.
24629fc87aa7SBarry Smith 
2463217d3b1eSJunchao Zhang    If you want to run MUMPS in MPI+OpenMP hybrid mode (i.e., enable multithreading in MUMPS), but still want to run the non-MUMPS part
2464217d3b1eSJunchao Zhang    (i.e., PETSc part) of your code in the so-called flat-MPI (aka pure-MPI) mode, you need to configure PETSc with --with-openmp --download-hwloc
2465217d3b1eSJunchao Zhang    (or --with-hwloc), and have an MPI that supports MPI-3.0's process shared memory (which is usually available). Since MUMPS calls BLAS
2466217d3b1eSJunchao Zhang    libraries, to really get performance, you should have multithreaded BLAS libraries such as Intel MKL, AMD ACML, Cray libSci or open sourced
2467217d3b1eSJunchao Zhang    OpenBLAS (PETSc has configure options to install/specify them). With these conditions met, you can run your program as before but with
2468217d3b1eSJunchao Zhang    an extra option -mat_mumps_use_omp_threads [m]. It works as if we set OMP_NUM_THREADS=m to MUMPS, with m defaults to the number of cores
2469217d3b1eSJunchao Zhang    per CPU socket (or package, in hwloc term), or number of PETSc MPI processes on a node, whichever is smaller.
2470217d3b1eSJunchao Zhang 
2471217d3b1eSJunchao Zhang    By flat-MPI or pure-MPI mode, it means you run your code with as many MPI ranks as the number of cores. For example,
2472217d3b1eSJunchao Zhang    if a compute node has 32 cores and you run on two nodes, you may use "mpirun -n 64 ./test". To run MPI+OpenMP hybrid MUMPS,
2473217d3b1eSJunchao Zhang    the tranditional way is to set OMP_NUM_THREADS and run with fewer MPI ranks than cores. For example, if you want to have 16 OpenMP
2474217d3b1eSJunchao Zhang    threads per rank, then you may use "export OMP_NUM_THREADS=16 && mpirun -n 4 ./test". The problem of this approach is that the non-MUMPS
2475217d3b1eSJunchao Zhang    part of your code is run with fewer cores and CPUs are wasted. "-mat_mumps_use_omp_threads [m]" provides an alternative such that
2476217d3b1eSJunchao Zhang    you can stil run your code with as many MPI ranks as the number of cores, but have MUMPS run in MPI+OpenMP hybrid mode. In our example,
2477217d3b1eSJunchao Zhang    you can use "mpirun -n 64 ./test -mat_mumps_use_omp_threads 16".
2478217d3b1eSJunchao Zhang 
2479217d3b1eSJunchao Zhang    If you run your code through a job submission system, there are caveats in MPI rank mapping. We use MPI_Comm_split_type to get MPI
2480217d3b1eSJunchao Zhang    processes on each compute node. Listing the processes in rank ascending order, we split processes on a node into consecutive groups of
2481217d3b1eSJunchao Zhang    size m and create a communicator called omp_comm for each group. Rank 0 in an omp_comm is called the master rank, and others in the omp_comm
2482217d3b1eSJunchao Zhang    are called slave ranks (or slaves). Only master ranks are seen to MUMPS and slaves are not. We will free CPUs assigned to slaves (might be set
2483217d3b1eSJunchao Zhang    by CPU binding policies in job scripts) and make the CPUs available to the master so that OMP threads spawned by MUMPS can run on the CPUs.
2484217d3b1eSJunchao Zhang    In a multi-socket compute node, MPI rank mapping is an issue. Still use the above example and suppose your compute node has two sockets,
2485217d3b1eSJunchao Zhang    if you interleave MPI ranks on the two sockets, in other words, even ranks are placed on socket 0, and odd ranks are on socket 1, and bind
2486217d3b1eSJunchao Zhang    MPI ranks to cores, then with -mat_mumps_use_omp_threads 16, a master rank (and threads it spawns) will use half cores in socket 0, and half
2487217d3b1eSJunchao Zhang    cores in socket 1, that definitely hurts locality. On the other hand, if you map MPI ranks consecutively on the two sockets, then the
2488217d3b1eSJunchao Zhang    problem will not happen. Therefore, when you use -mat_mumps_use_omp_threads, you need to keep an eye on your MPI rank mapping and CPU binding.
2489217d3b1eSJunchao Zhang    For example, with the Slurm job scheduler, one can use srun --cpu-bind=verbsoe -m block:block to map consecutive MPI ranks to sockets and
2490217d3b1eSJunchao Zhang    examine the mapping result.
2491217d3b1eSJunchao Zhang 
2492217d3b1eSJunchao Zhang    PETSc does not control thread binding in MUMPS. So to get best performance, one still has to set OMP_PROC_BIND and OMP_PLACES in job scripts,
2493217d3b1eSJunchao Zhang    for example, export OMP_PLACES=threads and export OMP_PROC_BIND=spread. One does not need to export OMP_NUM_THREADS=m in job scripts as PETSc
2494217d3b1eSJunchao Zhang    calls omp_set_num_threads(m) internally before calling MUMPS.
2495217d3b1eSJunchao Zhang 
2496217d3b1eSJunchao Zhang    References:
2497217d3b1eSJunchao Zhang +   1. - Heroux, Michael A., R. Brightwell, and Michael M. Wolf. "Bi-modal MPI and MPI+ threads computing on scalable multicore systems." IJHPCA (Submitted) (2011).
2498217d3b1eSJunchao Zhang -   2. - Gutierrez, Samuel K., et al. "Accommodating Thread-Level Heterogeneity in Coupled Parallel Applications." Parallel and Distributed Processing Symposium (IPDPS), 2017 IEEE International. IEEE, 2017.
2499217d3b1eSJunchao Zhang 
25003ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog(), KSPGetPC(), PCGetFactor(), PCFactorGetMatrix()
250141c8de11SBarry Smith 
250224b6179bSKris Buschelman M*/
250324b6179bSKris Buschelman 
2504ea799195SBarry Smith static PetscErrorCode MatFactorGetSolverType_mumps(Mat A,MatSolverType *type)
250535bd34faSBarry Smith {
250635bd34faSBarry Smith   PetscFunctionBegin;
25072692d6eeSBarry Smith   *type = MATSOLVERMUMPS;
250835bd34faSBarry Smith   PetscFunctionReturn(0);
250935bd34faSBarry Smith }
251035bd34faSBarry Smith 
2511bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI AIJ matrices */
2512cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_aij_mumps(Mat A,MatFactorType ftype,Mat *F)
25132877fffaSHong Zhang {
25142877fffaSHong Zhang   Mat            B;
25152877fffaSHong Zhang   PetscErrorCode ierr;
25162877fffaSHong Zhang   Mat_MUMPS      *mumps;
2517ace3abfcSBarry Smith   PetscBool      isSeqAIJ;
25182877fffaSHong Zhang 
25192877fffaSHong Zhang   PetscFunctionBegin;
25202877fffaSHong Zhang   /* Create the factorization matrix */
2521251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ);CHKERRQ(ierr);
2522ce94432eSBarry Smith   ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
25232877fffaSHong Zhang   ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
2524e69c285eSBarry Smith   ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr);
2525e69c285eSBarry Smith   ierr = MatSetUp(B);CHKERRQ(ierr);
25262877fffaSHong Zhang 
2527b00a9115SJed Brown   ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr);
25282205254eSKarl Rupp 
25292877fffaSHong Zhang   B->ops->view        = MatView_MUMPS;
253035bd34faSBarry Smith   B->ops->getinfo     = MatGetInfo_MUMPS;
25312205254eSKarl Rupp 
25323ca39a21SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr);
25335a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr);
25345a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr);
2535bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr);
2536bc6112feSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr);
2537bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr);
2538bc6112feSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr);
2539ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr);
2540ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr);
2541ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr);
2542ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr);
254389a9c03aSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr);
25440e6b8875SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr);
25456444a565SStefano Zampini 
2546450b117fSShri Abhyankar   if (ftype == MAT_FACTOR_LU) {
2547450b117fSShri Abhyankar     B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS;
2548d5f3da31SBarry Smith     B->factortype            = MAT_FACTOR_LU;
2549bccb9932SShri Abhyankar     if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqaij;
2550bccb9932SShri Abhyankar     else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpiaij;
2551746480a1SHong Zhang     mumps->sym = 0;
2552dcd589f8SShri Abhyankar   } else {
255367877ebaSShri Abhyankar     B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS;
2554450b117fSShri Abhyankar     B->factortype                  = MAT_FACTOR_CHOLESKY;
2555bccb9932SShri Abhyankar     if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqsbaij;
2556bccb9932SShri Abhyankar     else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpisbaij;
255759ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX)
255859ac8732SStefano Zampini     mumps->sym = 2;
255959ac8732SStefano Zampini #else
25606fdc2a6dSBarry Smith     if (A->spd_set && A->spd) mumps->sym = 1;
25616fdc2a6dSBarry Smith     else                      mumps->sym = 2;
256259ac8732SStefano Zampini #endif
2563450b117fSShri Abhyankar   }
25642877fffaSHong Zhang 
256500c67f3bSHong Zhang   /* set solvertype */
256600c67f3bSHong Zhang   ierr = PetscFree(B->solvertype);CHKERRQ(ierr);
256700c67f3bSHong Zhang   ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr);
256800c67f3bSHong Zhang 
25692877fffaSHong Zhang   B->ops->destroy = MatDestroy_MUMPS;
2570e69c285eSBarry Smith   B->data         = (void*)mumps;
25712205254eSKarl Rupp 
2572f697e70eSHong Zhang   ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr);
2573746480a1SHong Zhang 
25742877fffaSHong Zhang   *F = B;
25752877fffaSHong Zhang   PetscFunctionReturn(0);
25762877fffaSHong Zhang }
25772877fffaSHong Zhang 
2578bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI SBAIJ matrices */
2579cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_sbaij_mumps(Mat A,MatFactorType ftype,Mat *F)
25802877fffaSHong Zhang {
25812877fffaSHong Zhang   Mat            B;
25822877fffaSHong Zhang   PetscErrorCode ierr;
25832877fffaSHong Zhang   Mat_MUMPS      *mumps;
2584ace3abfcSBarry Smith   PetscBool      isSeqSBAIJ;
25852877fffaSHong Zhang 
25862877fffaSHong Zhang   PetscFunctionBegin;
2587ce94432eSBarry Smith   if (ftype != MAT_FACTOR_CHOLESKY) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with MUMPS LU, use AIJ matrix");
2588ce94432eSBarry Smith   if (A->rmap->bs > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with block size > 1 with MUMPS Cholesky, use AIJ matrix instead");
2589251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ);CHKERRQ(ierr);
25902877fffaSHong Zhang   /* Create the factorization matrix */
2591ce94432eSBarry Smith   ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
25922877fffaSHong Zhang   ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
2593e69c285eSBarry Smith   ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr);
2594e69c285eSBarry Smith   ierr = MatSetUp(B);CHKERRQ(ierr);
2595e69c285eSBarry Smith 
2596b00a9115SJed Brown   ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr);
2597bccb9932SShri Abhyankar   if (isSeqSBAIJ) {
259816ebf90aSShri Abhyankar     mumps->ConvertToTriples = MatConvertToTriples_seqsbaij_seqsbaij;
2599dcd589f8SShri Abhyankar   } else {
2600bccb9932SShri Abhyankar     mumps->ConvertToTriples = MatConvertToTriples_mpisbaij_mpisbaij;
2601bccb9932SShri Abhyankar   }
2602bccb9932SShri Abhyankar 
2603e69c285eSBarry Smith   B->ops->getinfo                = MatGetInfo_External;
260467877ebaSShri Abhyankar   B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS;
2605bccb9932SShri Abhyankar   B->ops->view                   = MatView_MUMPS;
26062205254eSKarl Rupp 
26073ca39a21SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr);
26085a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr);
26095a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr);
2610b13644aeSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr);
2611b13644aeSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr);
2612b13644aeSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr);
2613b13644aeSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr);
2614ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr);
2615ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr);
2616ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr);
2617ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr);
261889a9c03aSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr);
2619eef1237cSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr);
26202205254eSKarl Rupp 
2621f4762488SHong Zhang   B->factortype = MAT_FACTOR_CHOLESKY;
262259ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX)
262359ac8732SStefano Zampini   mumps->sym = 2;
262459ac8732SStefano Zampini #else
26256fdc2a6dSBarry Smith   if (A->spd_set && A->spd) mumps->sym = 1;
26266fdc2a6dSBarry Smith   else                      mumps->sym = 2;
262759ac8732SStefano Zampini #endif
2628a214ac2aSShri Abhyankar 
262900c67f3bSHong Zhang   /* set solvertype */
263000c67f3bSHong Zhang   ierr = PetscFree(B->solvertype);CHKERRQ(ierr);
263100c67f3bSHong Zhang   ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr);
263200c67f3bSHong Zhang 
2633f3c0ef26SHong Zhang   B->ops->destroy = MatDestroy_MUMPS;
2634e69c285eSBarry Smith   B->data         = (void*)mumps;
26352205254eSKarl Rupp 
2636f697e70eSHong Zhang   ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr);
2637746480a1SHong Zhang 
26382877fffaSHong Zhang   *F = B;
26392877fffaSHong Zhang   PetscFunctionReturn(0);
26402877fffaSHong Zhang }
264197969023SHong Zhang 
2642cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_baij_mumps(Mat A,MatFactorType ftype,Mat *F)
264367877ebaSShri Abhyankar {
264467877ebaSShri Abhyankar   Mat            B;
264567877ebaSShri Abhyankar   PetscErrorCode ierr;
264667877ebaSShri Abhyankar   Mat_MUMPS      *mumps;
2647ace3abfcSBarry Smith   PetscBool      isSeqBAIJ;
264867877ebaSShri Abhyankar 
264967877ebaSShri Abhyankar   PetscFunctionBegin;
265067877ebaSShri Abhyankar   /* Create the factorization matrix */
2651251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&isSeqBAIJ);CHKERRQ(ierr);
2652ce94432eSBarry Smith   ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
265367877ebaSShri Abhyankar   ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
2654e69c285eSBarry Smith   ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr);
2655e69c285eSBarry Smith   ierr = MatSetUp(B);CHKERRQ(ierr);
2656450b117fSShri Abhyankar 
2657b00a9115SJed Brown   ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr);
2658450b117fSShri Abhyankar   if (ftype == MAT_FACTOR_LU) {
2659450b117fSShri Abhyankar     B->ops->lufactorsymbolic = MatLUFactorSymbolic_BAIJMUMPS;
2660450b117fSShri Abhyankar     B->factortype            = MAT_FACTOR_LU;
2661bccb9932SShri Abhyankar     if (isSeqBAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqbaij_seqaij;
2662bccb9932SShri Abhyankar     else mumps->ConvertToTriples = MatConvertToTriples_mpibaij_mpiaij;
2663746480a1SHong Zhang     mumps->sym = 0;
2664f23aa3ddSBarry Smith   } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc BAIJ matrices with MUMPS Cholesky, use SBAIJ or AIJ matrix instead\n");
2665bccb9932SShri Abhyankar 
2666e69c285eSBarry Smith   B->ops->getinfo     = MatGetInfo_External;
2667450b117fSShri Abhyankar   B->ops->view        = MatView_MUMPS;
26682205254eSKarl Rupp 
26693ca39a21SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr);
26705a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr);
26715a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr);
2672bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr);
2673bc6112feSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr);
2674bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr);
2675bc6112feSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr);
2676ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr);
2677ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr);
2678ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr);
2679ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr);
268089a9c03aSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr);
2681eef1237cSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr);
2682450b117fSShri Abhyankar 
268300c67f3bSHong Zhang   /* set solvertype */
268400c67f3bSHong Zhang   ierr = PetscFree(B->solvertype);CHKERRQ(ierr);
268500c67f3bSHong Zhang   ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr);
268600c67f3bSHong Zhang 
26877ee00b23SStefano Zampini   B->ops->destroy = MatDestroy_MUMPS;
26887ee00b23SStefano Zampini   B->data         = (void*)mumps;
26897ee00b23SStefano Zampini 
26907ee00b23SStefano Zampini   ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr);
26917ee00b23SStefano Zampini 
26927ee00b23SStefano Zampini   *F = B;
26937ee00b23SStefano Zampini   PetscFunctionReturn(0);
26947ee00b23SStefano Zampini }
26957ee00b23SStefano Zampini 
26967ee00b23SStefano Zampini /* MatGetFactor for Seq and MPI SELL matrices */
26977ee00b23SStefano Zampini static PetscErrorCode MatGetFactor_sell_mumps(Mat A,MatFactorType ftype,Mat *F)
26987ee00b23SStefano Zampini {
26997ee00b23SStefano Zampini   Mat            B;
27007ee00b23SStefano Zampini   PetscErrorCode ierr;
27017ee00b23SStefano Zampini   Mat_MUMPS      *mumps;
27027ee00b23SStefano Zampini   PetscBool      isSeqSELL;
27037ee00b23SStefano Zampini 
27047ee00b23SStefano Zampini   PetscFunctionBegin;
27057ee00b23SStefano Zampini   /* Create the factorization matrix */
27067ee00b23SStefano Zampini   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSELL,&isSeqSELL);CHKERRQ(ierr);
27077ee00b23SStefano Zampini   ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
27087ee00b23SStefano Zampini   ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
27097ee00b23SStefano Zampini   ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr);
27107ee00b23SStefano Zampini   ierr = MatSetUp(B);CHKERRQ(ierr);
27117ee00b23SStefano Zampini 
27127ee00b23SStefano Zampini   ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr);
27137ee00b23SStefano Zampini 
27147ee00b23SStefano Zampini   B->ops->view        = MatView_MUMPS;
27157ee00b23SStefano Zampini   B->ops->getinfo     = MatGetInfo_MUMPS;
27167ee00b23SStefano Zampini 
27177ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr);
27187ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr);
27197ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr);
27207ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr);
27217ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr);
27227ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr);
27237ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr);
27247ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr);
27257ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr);
27267ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr);
27277ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr);
27287ee00b23SStefano Zampini 
27297ee00b23SStefano Zampini   if (ftype == MAT_FACTOR_LU) {
27307ee00b23SStefano Zampini     B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS;
27317ee00b23SStefano Zampini     B->factortype            = MAT_FACTOR_LU;
27327ee00b23SStefano Zampini     if (isSeqSELL) mumps->ConvertToTriples = MatConvertToTriples_seqsell_seqaij;
27337ee00b23SStefano Zampini     else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented");
27347ee00b23SStefano Zampini     mumps->sym = 0;
27357ee00b23SStefano Zampini   } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented");
27367ee00b23SStefano Zampini 
27377ee00b23SStefano Zampini   /* set solvertype */
27387ee00b23SStefano Zampini   ierr = PetscFree(B->solvertype);CHKERRQ(ierr);
27397ee00b23SStefano Zampini   ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr);
27407ee00b23SStefano Zampini 
2741450b117fSShri Abhyankar   B->ops->destroy = MatDestroy_MUMPS;
2742e69c285eSBarry Smith   B->data         = (void*)mumps;
27432205254eSKarl Rupp 
2744f697e70eSHong Zhang   ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr);
2745746480a1SHong Zhang 
2746450b117fSShri Abhyankar   *F = B;
2747450b117fSShri Abhyankar   PetscFunctionReturn(0);
2748450b117fSShri Abhyankar }
274942c9c57cSBarry Smith 
27503ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_MUMPS(void)
275142c9c57cSBarry Smith {
275242c9c57cSBarry Smith   PetscErrorCode ierr;
275342c9c57cSBarry Smith 
275442c9c57cSBarry Smith   PetscFunctionBegin;
27553ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr);
27563ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr);
27573ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr);
27583ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr);
27593ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPISBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr);
27603ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr);
27613ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr);
27623ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr);
27633ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr);
27643ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr);
27657ee00b23SStefano Zampini   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSELL,MAT_FACTOR_LU,MatGetFactor_sell_mumps);CHKERRQ(ierr);
276642c9c57cSBarry Smith   PetscFunctionReturn(0);
276742c9c57cSBarry Smith }
276842c9c57cSBarry Smith 
2769