11c2a3de1SBarry Smith 2397b6df1SKris Buschelman /* 3c2b5dc30SHong Zhang Provides an interface to the MUMPS sparse solver 4397b6df1SKris Buschelman */ 551d5961aSHong Zhang 6c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> /*I "petscmat.h" I*/ 7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h> 87ee00b23SStefano Zampini #include <../src/mat/impls/sell/mpi/mpisell.h> 9397b6df1SKris Buschelman 10397b6df1SKris Buschelman EXTERN_C_BEGIN 11397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 122907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 132907cef9SHong Zhang #include <cmumps_c.h> 142907cef9SHong Zhang #else 15c6db04a5SJed Brown #include <zmumps_c.h> 162907cef9SHong Zhang #endif 172907cef9SHong Zhang #else 182907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 192907cef9SHong Zhang #include <smumps_c.h> 20397b6df1SKris Buschelman #else 21c6db04a5SJed Brown #include <dmumps_c.h> 22397b6df1SKris Buschelman #endif 232907cef9SHong Zhang #endif 24397b6df1SKris Buschelman EXTERN_C_END 25397b6df1SKris Buschelman #define JOB_INIT -1 263d472b54SHong Zhang #define JOB_FACTSYMBOLIC 1 273d472b54SHong Zhang #define JOB_FACTNUMERIC 2 283d472b54SHong Zhang #define JOB_SOLVE 3 29397b6df1SKris Buschelman #define JOB_END -2 303d472b54SHong Zhang 312907cef9SHong Zhang /* calls to MUMPS */ 322907cef9SHong Zhang #if defined(PETSC_USE_COMPLEX) 332907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 343ab56b82SJunchao Zhang #define MUMPS_c cmumps_c 352907cef9SHong Zhang #else 363ab56b82SJunchao Zhang #define MUMPS_c zmumps_c 372907cef9SHong Zhang #endif 382907cef9SHong Zhang #else 392907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 403ab56b82SJunchao Zhang #define MUMPS_c smumps_c 412907cef9SHong Zhang #else 423ab56b82SJunchao Zhang #define MUMPS_c dmumps_c 432907cef9SHong Zhang #endif 442907cef9SHong Zhang #endif 452907cef9SHong Zhang 46217d3b1eSJunchao Zhang /* if using PETSc OpenMP support, we only call MUMPS on master ranks. Before/after the call, we change/restore CPUs the master ranks can run on */ 473ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 483ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 493ab56b82SJunchao Zhang do { \ 503ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { \ 513ab56b82SJunchao Zhang if (mumps->is_omp_master) { \ 523ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterBegin(mumps->omp_ctrl);CHKERRQ(ierr); \ 533ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 543ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterEnd(mumps->omp_ctrl);CHKERRQ(ierr); \ 553ab56b82SJunchao Zhang } \ 563ab56b82SJunchao Zhang ierr = PetscOmpCtrlBarrier(mumps->omp_ctrl);CHKERRQ(ierr); \ 573ab56b82SJunchao Zhang } else { \ 583ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 593ab56b82SJunchao Zhang } \ 603ab56b82SJunchao Zhang } while(0) 613ab56b82SJunchao Zhang #else 623ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 633ab56b82SJunchao Zhang do { MUMPS_c(&mumps->id); } while (0) 643ab56b82SJunchao Zhang #endif 653ab56b82SJunchao Zhang 66940cd9d6SSatish Balay /* declare MumpsScalar */ 67940cd9d6SSatish Balay #if defined(PETSC_USE_COMPLEX) 68940cd9d6SSatish Balay #if defined(PETSC_USE_REAL_SINGLE) 69940cd9d6SSatish Balay #define MumpsScalar mumps_complex 70940cd9d6SSatish Balay #else 71940cd9d6SSatish Balay #define MumpsScalar mumps_double_complex 72940cd9d6SSatish Balay #endif 73940cd9d6SSatish Balay #else 74940cd9d6SSatish Balay #define MumpsScalar PetscScalar 75940cd9d6SSatish Balay #endif 763d472b54SHong Zhang 77397b6df1SKris Buschelman /* macros s.t. indices match MUMPS documentation */ 78397b6df1SKris Buschelman #define ICNTL(I) icntl[(I)-1] 79397b6df1SKris Buschelman #define CNTL(I) cntl[(I)-1] 80397b6df1SKris Buschelman #define INFOG(I) infog[(I)-1] 81a7aca84bSHong Zhang #define INFO(I) info[(I)-1] 82397b6df1SKris Buschelman #define RINFOG(I) rinfog[(I)-1] 83adc1d99fSHong Zhang #define RINFO(I) rinfo[(I)-1] 84397b6df1SKris Buschelman 85397b6df1SKris Buschelman typedef struct { 86397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 872907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 882907cef9SHong Zhang CMUMPS_STRUC_C id; 892907cef9SHong Zhang #else 90397b6df1SKris Buschelman ZMUMPS_STRUC_C id; 912907cef9SHong Zhang #endif 922907cef9SHong Zhang #else 932907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 942907cef9SHong Zhang SMUMPS_STRUC_C id; 95397b6df1SKris Buschelman #else 96397b6df1SKris Buschelman DMUMPS_STRUC_C id; 97397b6df1SKris Buschelman #endif 982907cef9SHong Zhang #endif 992907cef9SHong Zhang 100397b6df1SKris Buschelman MatStructure matstruc; 1012d4298aeSJunchao Zhang PetscMPIInt myid,petsc_size; 102a5e57a09SHong Zhang PetscInt *irn,*jcn,nz,sym; 103397b6df1SKris Buschelman PetscScalar *val; 1042d4298aeSJunchao Zhang MPI_Comm mumps_comm; 105a5e57a09SHong Zhang PetscInt ICNTL9_pre; /* check if ICNTL(9) is changed from previous MatSolve */ 106801fbe65SHong Zhang VecScatter scat_rhs, scat_sol; /* used by MatSolve() */ 107801fbe65SHong Zhang Vec b_seq,x_seq; 108b34f08ffSHong Zhang PetscInt ninfo,*info; /* display INFO */ 109b5fa320bSStefano Zampini PetscInt sizeredrhs; 11059ac8732SStefano Zampini PetscScalar *schur_sol; 11159ac8732SStefano Zampini PetscInt schur_sizesol; 1122205254eSKarl Rupp 1133ab56b82SJunchao Zhang PetscBool use_petsc_omp_support; 1143ab56b82SJunchao Zhang PetscOmpCtrl omp_ctrl; /* an OpenMP controler that blocked processes will release their CPU (MPI_Barrier does not have this guarantee) */ 1153ab56b82SJunchao Zhang MPI_Comm petsc_comm,omp_comm; /* petsc_comm is petsc matrix's comm */ 1163ab56b82SJunchao Zhang PetscMPIInt mpinz; /* on master rank, nz = sum(mpinz) over omp_comm; on other ranks, mpinz = nz*/ 1173ab56b82SJunchao Zhang PetscMPIInt omp_comm_size; 1183ab56b82SJunchao Zhang PetscBool is_omp_master; /* is this rank the master of omp_comm */ 1193ab56b82SJunchao Zhang PetscMPIInt *recvcount,*displs; 1203ab56b82SJunchao Zhang 121bccb9932SShri Abhyankar PetscErrorCode (*ConvertToTriples)(Mat, int, MatReuse, int*, int**, int**, PetscScalar**); 122f0c56d0fSKris Buschelman } Mat_MUMPS; 123f0c56d0fSKris Buschelman 12409573ac7SBarry Smith extern PetscErrorCode MatDuplicate_MUMPS(Mat,MatDuplicateOption,Mat*); 125b24902e0SBarry Smith 12659ac8732SStefano Zampini static PetscErrorCode MatMumpsResetSchur_Private(Mat_MUMPS* mumps) 127b5fa320bSStefano Zampini { 128b5fa320bSStefano Zampini PetscErrorCode ierr; 129b5fa320bSStefano Zampini 130b5fa320bSStefano Zampini PetscFunctionBegin; 13159ac8732SStefano Zampini ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr); 13259ac8732SStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 13359ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 13459ac8732SStefano Zampini mumps->id.size_schur = 0; 135b3cb21ddSStefano Zampini mumps->id.schur_lld = 0; 13659ac8732SStefano Zampini mumps->id.ICNTL(19) = 0; 13759ac8732SStefano Zampini PetscFunctionReturn(0); 13859ac8732SStefano Zampini } 13959ac8732SStefano Zampini 140b3cb21ddSStefano Zampini /* solve with rhs in mumps->id.redrhs and return in the same location */ 141b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsSolveSchur_Private(Mat F) 14259ac8732SStefano Zampini { 143b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 144b3cb21ddSStefano Zampini Mat S,B,X; 145b3cb21ddSStefano Zampini MatFactorSchurStatus schurstatus; 146b3cb21ddSStefano Zampini PetscInt sizesol; 14759ac8732SStefano Zampini PetscErrorCode ierr; 14859ac8732SStefano Zampini 14959ac8732SStefano Zampini PetscFunctionBegin; 150b3cb21ddSStefano Zampini ierr = MatFactorFactorizeSchurComplement(F);CHKERRQ(ierr); 151b3cb21ddSStefano Zampini ierr = MatFactorGetSchurComplement(F,&S,&schurstatus);CHKERRQ(ierr); 152b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&B);CHKERRQ(ierr); 153b3cb21ddSStefano Zampini switch (schurstatus) { 154b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_FACTORED: 155b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&X);CHKERRQ(ierr); 156b3cb21ddSStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 157b3cb21ddSStefano Zampini ierr = MatMatSolveTranspose(S,B,X);CHKERRQ(ierr); 15859ac8732SStefano Zampini } else { 159b3cb21ddSStefano Zampini ierr = MatMatSolve(S,B,X);CHKERRQ(ierr); 16059ac8732SStefano Zampini } 161b3cb21ddSStefano Zampini break; 162b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_INVERTED: 163b3cb21ddSStefano Zampini sizesol = mumps->id.nrhs*mumps->id.size_schur; 16459ac8732SStefano Zampini if (!mumps->schur_sol || sizesol > mumps->schur_sizesol) { 16559ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 16659ac8732SStefano Zampini ierr = PetscMalloc1(sizesol,&mumps->schur_sol);CHKERRQ(ierr); 16759ac8732SStefano Zampini mumps->schur_sizesol = sizesol; 168b5fa320bSStefano Zampini } 169b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,mumps->schur_sol,&X);CHKERRQ(ierr); 17059ac8732SStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 171b3cb21ddSStefano Zampini ierr = MatTransposeMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 172b5fa320bSStefano Zampini } else { 173b3cb21ddSStefano Zampini ierr = MatMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 174b5fa320bSStefano Zampini } 175b3cb21ddSStefano Zampini ierr = MatCopy(X,B,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 176b3cb21ddSStefano Zampini break; 177b3cb21ddSStefano Zampini default: 178b3cb21ddSStefano Zampini SETERRQ1(PetscObjectComm((PetscObject)F),PETSC_ERR_SUP,"Unhandled MatFactorSchurStatus %D",F->schur_status); 179b3cb21ddSStefano Zampini break; 18059ac8732SStefano Zampini } 181b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,&S,schurstatus);CHKERRQ(ierr); 182b3cb21ddSStefano Zampini ierr = MatDestroy(&B);CHKERRQ(ierr); 183b3cb21ddSStefano Zampini ierr = MatDestroy(&X);CHKERRQ(ierr); 184b5fa320bSStefano Zampini PetscFunctionReturn(0); 185b5fa320bSStefano Zampini } 186b5fa320bSStefano Zampini 187b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsHandleSchur_Private(Mat F, PetscBool expansion) 188b5fa320bSStefano Zampini { 189b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 190b5fa320bSStefano Zampini PetscErrorCode ierr; 191b5fa320bSStefano Zampini 192b5fa320bSStefano Zampini PetscFunctionBegin; 193b5fa320bSStefano Zampini if (!mumps->id.ICNTL(19)) { /* do nothing when Schur complement has not been computed */ 194b5fa320bSStefano Zampini PetscFunctionReturn(0); 195b5fa320bSStefano Zampini } 196b8f61ee1SStefano Zampini if (!expansion) { /* prepare for the condensation step */ 197b5fa320bSStefano Zampini PetscInt sizeredrhs = mumps->id.nrhs*mumps->id.size_schur; 198b5fa320bSStefano Zampini /* allocate MUMPS internal array to store reduced right-hand sides */ 199b5fa320bSStefano Zampini if (!mumps->id.redrhs || sizeredrhs > mumps->sizeredrhs) { 200b5fa320bSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 201b5fa320bSStefano Zampini mumps->id.lredrhs = mumps->id.size_schur; 202b5fa320bSStefano Zampini ierr = PetscMalloc1(mumps->id.nrhs*mumps->id.lredrhs,&mumps->id.redrhs);CHKERRQ(ierr); 203b5fa320bSStefano Zampini mumps->sizeredrhs = mumps->id.nrhs*mumps->id.lredrhs; 204b5fa320bSStefano Zampini } 205b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 1; /* condensation phase */ 206b5fa320bSStefano Zampini } else { /* prepare for the expansion step */ 207b8f61ee1SStefano Zampini /* solve Schur complement (this has to be done by the MUMPS user, so basically us) */ 208b3cb21ddSStefano Zampini ierr = MatMumpsSolveSchur_Private(F);CHKERRQ(ierr); 209b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 2; /* expansion phase */ 2103ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 211b5fa320bSStefano Zampini if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 212b5fa320bSStefano Zampini /* restore defaults */ 213b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 214d3d598ffSStefano Zampini /* free MUMPS internal array for redrhs if we have solved for multiple rhs in order to save memory space */ 215d3d598ffSStefano Zampini if (mumps->id.nrhs > 1) { 216d3d598ffSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 217d3d598ffSStefano Zampini mumps->id.lredrhs = 0; 218d3d598ffSStefano Zampini mumps->sizeredrhs = 0; 219d3d598ffSStefano Zampini } 220b5fa320bSStefano Zampini } 221b5fa320bSStefano Zampini PetscFunctionReturn(0); 222b5fa320bSStefano Zampini } 223b5fa320bSStefano Zampini 224397b6df1SKris Buschelman /* 225d341cd04SHong Zhang MatConvertToTriples_A_B - convert Petsc matrix to triples: row[nz], col[nz], val[nz] 226d341cd04SHong Zhang 227397b6df1SKris Buschelman input: 22867877ebaSShri Abhyankar A - matrix in aij,baij or sbaij (bs=1) format 229397b6df1SKris Buschelman shift - 0: C style output triple; 1: Fortran style output triple. 230bccb9932SShri Abhyankar reuse - MAT_INITIAL_MATRIX: spaces are allocated and values are set for the triple 231bccb9932SShri Abhyankar MAT_REUSE_MATRIX: only the values in v array are updated 232397b6df1SKris Buschelman output: 233397b6df1SKris Buschelman nnz - dim of r, c, and v (number of local nonzero entries of A) 234397b6df1SKris Buschelman r, c, v - row and col index, matrix values (matrix triples) 235eb9baa12SBarry Smith 236eb9baa12SBarry Smith The returned values r, c, and sometimes v are obtained in a single PetscMalloc(). Then in MatDestroy_MUMPS() it is 2377ee00b23SStefano Zampini freed with PetscFree(mumps->irn); This is not ideal code, the fact that v is ONLY sometimes part of mumps->irn means 238eb9baa12SBarry Smith that the PetscMalloc() cannot easily be replaced with a PetscMalloc3(). 239eb9baa12SBarry Smith 240397b6df1SKris Buschelman */ 24116ebf90aSShri Abhyankar 242bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 243b24902e0SBarry Smith { 244185f6596SHong Zhang const PetscInt *ai,*aj,*ajj,M=A->rmap->n; 24567877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 246dfbe8321SBarry Smith PetscErrorCode ierr; 247c1490034SHong Zhang PetscInt *row,*col; 24816ebf90aSShri Abhyankar Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 249397b6df1SKris Buschelman 250397b6df1SKris Buschelman PetscFunctionBegin; 25116ebf90aSShri Abhyankar *v=aa->a; 252bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 2532205254eSKarl Rupp nz = aa->nz; 2542205254eSKarl Rupp ai = aa->i; 2552205254eSKarl Rupp aj = aa->j; 25616ebf90aSShri Abhyankar *nnz = nz; 257785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 258185f6596SHong Zhang col = row + nz; 259185f6596SHong Zhang 26016ebf90aSShri Abhyankar nz = 0; 26116ebf90aSShri Abhyankar for (i=0; i<M; i++) { 26216ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 26367877ebaSShri Abhyankar ajj = aj + ai[i]; 26467877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 26567877ebaSShri Abhyankar row[nz] = i+shift; col[nz++] = ajj[j] + shift; 26616ebf90aSShri Abhyankar } 26716ebf90aSShri Abhyankar } 26816ebf90aSShri Abhyankar *r = row; *c = col; 26916ebf90aSShri Abhyankar } 27016ebf90aSShri Abhyankar PetscFunctionReturn(0); 27116ebf90aSShri Abhyankar } 272397b6df1SKris Buschelman 2737ee00b23SStefano Zampini PetscErrorCode MatConvertToTriples_seqsell_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 2747ee00b23SStefano Zampini { 2757ee00b23SStefano Zampini Mat_SeqSELL *a=(Mat_SeqSELL*)A->data; 2767ee00b23SStefano Zampini PetscInt *ptr; 2777ee00b23SStefano Zampini 2787ee00b23SStefano Zampini PetscFunctionBegin; 2797ee00b23SStefano Zampini *v = a->val; 2807ee00b23SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 2817ee00b23SStefano Zampini PetscInt nz,i,j,row; 2827ee00b23SStefano Zampini PetscErrorCode ierr; 2837ee00b23SStefano Zampini 2847ee00b23SStefano Zampini nz = a->sliidx[a->totalslices]; 2857ee00b23SStefano Zampini *nnz = nz; 2867ee00b23SStefano Zampini ierr = PetscMalloc1(2*nz, &ptr);CHKERRQ(ierr); 2877ee00b23SStefano Zampini *r = ptr; 2887ee00b23SStefano Zampini *c = ptr + nz; 2897ee00b23SStefano Zampini 2907ee00b23SStefano Zampini for (i=0; i<a->totalslices; i++) { 2917ee00b23SStefano Zampini for (j=a->sliidx[i],row=0; j<a->sliidx[i+1]; j++,row=((row+1)&0x07)) { 2927ee00b23SStefano Zampini *ptr++ = 8*i + row + shift; 2937ee00b23SStefano Zampini } 2947ee00b23SStefano Zampini } 2957ee00b23SStefano Zampini for (i=0;i<nz;i++) *ptr++ = a->colidx[i] + shift; 2967ee00b23SStefano Zampini } 2977ee00b23SStefano Zampini PetscFunctionReturn(0); 2987ee00b23SStefano Zampini } 2997ee00b23SStefano Zampini 300bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqbaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 30167877ebaSShri Abhyankar { 30267877ebaSShri Abhyankar Mat_SeqBAIJ *aa=(Mat_SeqBAIJ*)A->data; 30333d57670SJed Brown const PetscInt *ai,*aj,*ajj,bs2 = aa->bs2; 30433d57670SJed Brown PetscInt bs,M,nz,idx=0,rnz,i,j,k,m; 30567877ebaSShri Abhyankar PetscErrorCode ierr; 30667877ebaSShri Abhyankar PetscInt *row,*col; 30767877ebaSShri Abhyankar 30867877ebaSShri Abhyankar PetscFunctionBegin; 30933d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 31033d57670SJed Brown M = A->rmap->N/bs; 311cf3759fdSShri Abhyankar *v = aa->a; 312bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 313cf3759fdSShri Abhyankar ai = aa->i; aj = aa->j; 31467877ebaSShri Abhyankar nz = bs2*aa->nz; 31567877ebaSShri Abhyankar *nnz = nz; 316785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 317185f6596SHong Zhang col = row + nz; 318185f6596SHong Zhang 31967877ebaSShri Abhyankar for (i=0; i<M; i++) { 32067877ebaSShri Abhyankar ajj = aj + ai[i]; 32167877ebaSShri Abhyankar rnz = ai[i+1] - ai[i]; 32267877ebaSShri Abhyankar for (k=0; k<rnz; k++) { 32367877ebaSShri Abhyankar for (j=0; j<bs; j++) { 32467877ebaSShri Abhyankar for (m=0; m<bs; m++) { 32567877ebaSShri Abhyankar row[idx] = i*bs + m + shift; 326cf3759fdSShri Abhyankar col[idx++] = bs*(ajj[k]) + j + shift; 32767877ebaSShri Abhyankar } 32867877ebaSShri Abhyankar } 32967877ebaSShri Abhyankar } 33067877ebaSShri Abhyankar } 331cf3759fdSShri Abhyankar *r = row; *c = col; 33267877ebaSShri Abhyankar } 33367877ebaSShri Abhyankar PetscFunctionReturn(0); 33467877ebaSShri Abhyankar } 33567877ebaSShri Abhyankar 336bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqsbaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 33716ebf90aSShri Abhyankar { 33867877ebaSShri Abhyankar const PetscInt *ai, *aj,*ajj,M=A->rmap->n; 33967877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 34016ebf90aSShri Abhyankar PetscErrorCode ierr; 34116ebf90aSShri Abhyankar PetscInt *row,*col; 34216ebf90aSShri Abhyankar Mat_SeqSBAIJ *aa=(Mat_SeqSBAIJ*)A->data; 34338548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 34438548759SBarry Smith PetscBool hermitian; 34538548759SBarry Smith #endif 34616ebf90aSShri Abhyankar 34716ebf90aSShri Abhyankar PetscFunctionBegin; 34838548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 34938548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 35038548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 35138548759SBarry Smith #endif 352882afa5aSHong Zhang *v = aa->a; 353bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 3542205254eSKarl Rupp nz = aa->nz; 3552205254eSKarl Rupp ai = aa->i; 3562205254eSKarl Rupp aj = aa->j; 3572205254eSKarl Rupp *v = aa->a; 35816ebf90aSShri Abhyankar *nnz = nz; 359785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 360185f6596SHong Zhang col = row + nz; 361185f6596SHong Zhang 36216ebf90aSShri Abhyankar nz = 0; 36316ebf90aSShri Abhyankar for (i=0; i<M; i++) { 36416ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 36567877ebaSShri Abhyankar ajj = aj + ai[i]; 36667877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 36767877ebaSShri Abhyankar row[nz] = i+shift; col[nz++] = ajj[j] + shift; 36816ebf90aSShri Abhyankar } 36916ebf90aSShri Abhyankar } 37016ebf90aSShri Abhyankar *r = row; *c = col; 37116ebf90aSShri Abhyankar } 37216ebf90aSShri Abhyankar PetscFunctionReturn(0); 37316ebf90aSShri Abhyankar } 37416ebf90aSShri Abhyankar 375bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 37616ebf90aSShri Abhyankar { 37767877ebaSShri Abhyankar const PetscInt *ai,*aj,*ajj,*adiag,M=A->rmap->n; 37867877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 37967877ebaSShri Abhyankar const PetscScalar *av,*v1; 38016ebf90aSShri Abhyankar PetscScalar *val; 38116ebf90aSShri Abhyankar PetscErrorCode ierr; 38216ebf90aSShri Abhyankar PetscInt *row,*col; 383829b1710SHong Zhang Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 38429b521d4Sstefano_zampini PetscBool missing; 38538548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 38638548759SBarry Smith PetscBool hermitian; 38738548759SBarry Smith #endif 38816ebf90aSShri Abhyankar 38916ebf90aSShri Abhyankar PetscFunctionBegin; 39038548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 39138548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 39238548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 39338548759SBarry Smith #endif 39416ebf90aSShri Abhyankar ai = aa->i; aj = aa->j; av = aa->a; 39516ebf90aSShri Abhyankar adiag = aa->diag; 39629b521d4Sstefano_zampini ierr = MatMissingDiagonal_SeqAIJ(A,&missing,&i);CHKERRQ(ierr); 397bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 3987ee00b23SStefano Zampini /* count nz in the upper triangular part of A */ 399829b1710SHong Zhang nz = 0; 40029b521d4Sstefano_zampini if (missing) { 40129b521d4Sstefano_zampini for (i=0; i<M; i++) { 40229b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 40329b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 40429b521d4Sstefano_zampini if (aj[j] < i) continue; 40529b521d4Sstefano_zampini nz++; 40629b521d4Sstefano_zampini } 40729b521d4Sstefano_zampini } else { 40829b521d4Sstefano_zampini nz += ai[i+1] - adiag[i]; 40929b521d4Sstefano_zampini } 41029b521d4Sstefano_zampini } 41129b521d4Sstefano_zampini } else { 412829b1710SHong Zhang for (i=0; i<M; i++) nz += ai[i+1] - adiag[i]; 41329b521d4Sstefano_zampini } 41416ebf90aSShri Abhyankar *nnz = nz; 415829b1710SHong Zhang 416185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 417185f6596SHong Zhang col = row + nz; 418185f6596SHong Zhang val = (PetscScalar*)(col + nz); 419185f6596SHong Zhang 42016ebf90aSShri Abhyankar nz = 0; 42129b521d4Sstefano_zampini if (missing) { 42229b521d4Sstefano_zampini for (i=0; i<M; i++) { 42329b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 42429b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 42529b521d4Sstefano_zampini if (aj[j] < i) continue; 42629b521d4Sstefano_zampini row[nz] = i+shift; 42729b521d4Sstefano_zampini col[nz] = aj[j]+shift; 42829b521d4Sstefano_zampini val[nz] = av[j]; 42929b521d4Sstefano_zampini nz++; 43029b521d4Sstefano_zampini } 43129b521d4Sstefano_zampini } else { 43229b521d4Sstefano_zampini rnz = ai[i+1] - adiag[i]; 43329b521d4Sstefano_zampini ajj = aj + adiag[i]; 43429b521d4Sstefano_zampini v1 = av + adiag[i]; 43529b521d4Sstefano_zampini for (j=0; j<rnz; j++) { 43629b521d4Sstefano_zampini row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 43729b521d4Sstefano_zampini } 43829b521d4Sstefano_zampini } 43929b521d4Sstefano_zampini } 44029b521d4Sstefano_zampini } else { 44116ebf90aSShri Abhyankar for (i=0; i<M; i++) { 44216ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 44367877ebaSShri Abhyankar ajj = aj + adiag[i]; 444cf3759fdSShri Abhyankar v1 = av + adiag[i]; 44567877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 44667877ebaSShri Abhyankar row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 44716ebf90aSShri Abhyankar } 44816ebf90aSShri Abhyankar } 44929b521d4Sstefano_zampini } 45016ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 451397b6df1SKris Buschelman } else { 45216ebf90aSShri Abhyankar nz = 0; val = *v; 45329b521d4Sstefano_zampini if (missing) { 45416ebf90aSShri Abhyankar for (i=0; i <M; i++) { 45529b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 45629b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 45729b521d4Sstefano_zampini if (aj[j] < i) continue; 45829b521d4Sstefano_zampini val[nz++] = av[j]; 45929b521d4Sstefano_zampini } 46029b521d4Sstefano_zampini } else { 46116ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 46267877ebaSShri Abhyankar v1 = av + adiag[i]; 46367877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 46467877ebaSShri Abhyankar val[nz++] = v1[j]; 46516ebf90aSShri Abhyankar } 46616ebf90aSShri Abhyankar } 46716ebf90aSShri Abhyankar } 46829b521d4Sstefano_zampini } else { 46916ebf90aSShri Abhyankar for (i=0; i <M; i++) { 47016ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 47116ebf90aSShri Abhyankar v1 = av + adiag[i]; 47216ebf90aSShri Abhyankar for (j=0; j<rnz; j++) { 47316ebf90aSShri Abhyankar val[nz++] = v1[j]; 47416ebf90aSShri Abhyankar } 47516ebf90aSShri Abhyankar } 47616ebf90aSShri Abhyankar } 47729b521d4Sstefano_zampini } 47816ebf90aSShri Abhyankar PetscFunctionReturn(0); 47916ebf90aSShri Abhyankar } 48016ebf90aSShri Abhyankar 481bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpisbaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 48216ebf90aSShri Abhyankar { 48316ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 48416ebf90aSShri Abhyankar PetscErrorCode ierr; 48516ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 48616ebf90aSShri Abhyankar PetscInt *row,*col; 48716ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 48816ebf90aSShri Abhyankar PetscScalar *val; 489397b6df1SKris Buschelman Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)A->data; 490397b6df1SKris Buschelman Mat_SeqSBAIJ *aa = (Mat_SeqSBAIJ*)(mat->A)->data; 491397b6df1SKris Buschelman Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 49238548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 49338548759SBarry Smith PetscBool hermitian; 49438548759SBarry Smith #endif 49516ebf90aSShri Abhyankar 49616ebf90aSShri Abhyankar PetscFunctionBegin; 49738548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 49838548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 49938548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 50038548759SBarry Smith #endif 50138548759SBarry Smith rstart = A->rmap->rstart; 50238548759SBarry Smith ai = aa->i; 50338548759SBarry Smith aj = aa->j; 50438548759SBarry Smith bi = bb->i; 50538548759SBarry Smith bj = bb->j; 50638548759SBarry Smith av = aa->a; 50738548759SBarry Smith bv = bb->a; 508397b6df1SKris Buschelman 5092205254eSKarl Rupp garray = mat->garray; 5102205254eSKarl Rupp 511bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 51216ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 51316ebf90aSShri Abhyankar *nnz = nz; 514185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 515185f6596SHong Zhang col = row + nz; 516185f6596SHong Zhang val = (PetscScalar*)(col + nz); 517185f6596SHong Zhang 518397b6df1SKris Buschelman *r = row; *c = col; *v = val; 519397b6df1SKris Buschelman } else { 520397b6df1SKris Buschelman row = *r; col = *c; val = *v; 521397b6df1SKris Buschelman } 522397b6df1SKris Buschelman 523028e57e8SHong Zhang jj = 0; irow = rstart; 524397b6df1SKris Buschelman for (i=0; i<m; i++) { 525397b6df1SKris Buschelman ajj = aj + ai[i]; /* ptr to the beginning of this row */ 526397b6df1SKris Buschelman countA = ai[i+1] - ai[i]; 527397b6df1SKris Buschelman countB = bi[i+1] - bi[i]; 528397b6df1SKris Buschelman bjj = bj + bi[i]; 52916ebf90aSShri Abhyankar v1 = av + ai[i]; 53016ebf90aSShri Abhyankar v2 = bv + bi[i]; 531397b6df1SKris Buschelman 532397b6df1SKris Buschelman /* A-part */ 533397b6df1SKris Buschelman for (j=0; j<countA; j++) { 534bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 535397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 536397b6df1SKris Buschelman } 53716ebf90aSShri Abhyankar val[jj++] = v1[j]; 538397b6df1SKris Buschelman } 53916ebf90aSShri Abhyankar 54016ebf90aSShri Abhyankar /* B-part */ 54116ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 542bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 543397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 544397b6df1SKris Buschelman } 54516ebf90aSShri Abhyankar val[jj++] = v2[j]; 54616ebf90aSShri Abhyankar } 54716ebf90aSShri Abhyankar irow++; 54816ebf90aSShri Abhyankar } 54916ebf90aSShri Abhyankar PetscFunctionReturn(0); 55016ebf90aSShri Abhyankar } 55116ebf90aSShri Abhyankar 552bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 55316ebf90aSShri Abhyankar { 55416ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 55516ebf90aSShri Abhyankar PetscErrorCode ierr; 55616ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 55716ebf90aSShri Abhyankar PetscInt *row,*col; 55816ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 55916ebf90aSShri Abhyankar PetscScalar *val; 56016ebf90aSShri Abhyankar Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 56116ebf90aSShri Abhyankar Mat_SeqAIJ *aa = (Mat_SeqAIJ*)(mat->A)->data; 56216ebf90aSShri Abhyankar Mat_SeqAIJ *bb = (Mat_SeqAIJ*)(mat->B)->data; 56316ebf90aSShri Abhyankar 56416ebf90aSShri Abhyankar PetscFunctionBegin; 56538548759SBarry Smith rstart = A->rmap->rstart; 56638548759SBarry Smith ai = aa->i; 56738548759SBarry Smith aj = aa->j; 56838548759SBarry Smith bi = bb->i; 56938548759SBarry Smith bj = bb->j; 57038548759SBarry Smith av = aa->a; 57138548759SBarry Smith bv = bb->a; 57216ebf90aSShri Abhyankar 5732205254eSKarl Rupp garray = mat->garray; 5742205254eSKarl Rupp 575bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 57616ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 57716ebf90aSShri Abhyankar *nnz = nz; 578185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 579185f6596SHong Zhang col = row + nz; 580185f6596SHong Zhang val = (PetscScalar*)(col + nz); 581185f6596SHong Zhang 58216ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 58316ebf90aSShri Abhyankar } else { 58416ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 58516ebf90aSShri Abhyankar } 58616ebf90aSShri Abhyankar 58716ebf90aSShri Abhyankar jj = 0; irow = rstart; 58816ebf90aSShri Abhyankar for (i=0; i<m; i++) { 58916ebf90aSShri Abhyankar ajj = aj + ai[i]; /* ptr to the beginning of this row */ 59016ebf90aSShri Abhyankar countA = ai[i+1] - ai[i]; 59116ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 59216ebf90aSShri Abhyankar bjj = bj + bi[i]; 59316ebf90aSShri Abhyankar v1 = av + ai[i]; 59416ebf90aSShri Abhyankar v2 = bv + bi[i]; 59516ebf90aSShri Abhyankar 59616ebf90aSShri Abhyankar /* A-part */ 59716ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 598bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 59916ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 60016ebf90aSShri Abhyankar } 60116ebf90aSShri Abhyankar val[jj++] = v1[j]; 60216ebf90aSShri Abhyankar } 60316ebf90aSShri Abhyankar 60416ebf90aSShri Abhyankar /* B-part */ 60516ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 606bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 60716ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 60816ebf90aSShri Abhyankar } 60916ebf90aSShri Abhyankar val[jj++] = v2[j]; 61016ebf90aSShri Abhyankar } 61116ebf90aSShri Abhyankar irow++; 61216ebf90aSShri Abhyankar } 61316ebf90aSShri Abhyankar PetscFunctionReturn(0); 61416ebf90aSShri Abhyankar } 61516ebf90aSShri Abhyankar 616bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpibaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 61767877ebaSShri Abhyankar { 61867877ebaSShri Abhyankar Mat_MPIBAIJ *mat = (Mat_MPIBAIJ*)A->data; 61967877ebaSShri Abhyankar Mat_SeqBAIJ *aa = (Mat_SeqBAIJ*)(mat->A)->data; 62067877ebaSShri Abhyankar Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 62167877ebaSShri Abhyankar const PetscInt *ai = aa->i, *bi = bb->i, *aj = aa->j, *bj = bb->j,*ajj, *bjj; 622d985c460SShri Abhyankar const PetscInt *garray = mat->garray,mbs=mat->mbs,rstart=A->rmap->rstart; 62333d57670SJed Brown const PetscInt bs2=mat->bs2; 62467877ebaSShri Abhyankar PetscErrorCode ierr; 62533d57670SJed Brown PetscInt bs,nz,i,j,k,n,jj,irow,countA,countB,idx; 62667877ebaSShri Abhyankar PetscInt *row,*col; 62767877ebaSShri Abhyankar const PetscScalar *av=aa->a, *bv=bb->a,*v1,*v2; 62867877ebaSShri Abhyankar PetscScalar *val; 62967877ebaSShri Abhyankar 63067877ebaSShri Abhyankar PetscFunctionBegin; 63133d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 632bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 63367877ebaSShri Abhyankar nz = bs2*(aa->nz + bb->nz); 63467877ebaSShri Abhyankar *nnz = nz; 635185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 636185f6596SHong Zhang col = row + nz; 637185f6596SHong Zhang val = (PetscScalar*)(col + nz); 638185f6596SHong Zhang 63967877ebaSShri Abhyankar *r = row; *c = col; *v = val; 64067877ebaSShri Abhyankar } else { 64167877ebaSShri Abhyankar row = *r; col = *c; val = *v; 64267877ebaSShri Abhyankar } 64367877ebaSShri Abhyankar 644d985c460SShri Abhyankar jj = 0; irow = rstart; 64567877ebaSShri Abhyankar for (i=0; i<mbs; i++) { 64667877ebaSShri Abhyankar countA = ai[i+1] - ai[i]; 64767877ebaSShri Abhyankar countB = bi[i+1] - bi[i]; 64867877ebaSShri Abhyankar ajj = aj + ai[i]; 64967877ebaSShri Abhyankar bjj = bj + bi[i]; 65067877ebaSShri Abhyankar v1 = av + bs2*ai[i]; 65167877ebaSShri Abhyankar v2 = bv + bs2*bi[i]; 65267877ebaSShri Abhyankar 65367877ebaSShri Abhyankar idx = 0; 65467877ebaSShri Abhyankar /* A-part */ 65567877ebaSShri Abhyankar for (k=0; k<countA; k++) { 65667877ebaSShri Abhyankar for (j=0; j<bs; j++) { 65767877ebaSShri Abhyankar for (n=0; n<bs; n++) { 658bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 659d985c460SShri Abhyankar row[jj] = irow + n + shift; 660d985c460SShri Abhyankar col[jj] = rstart + bs*ajj[k] + j + shift; 66167877ebaSShri Abhyankar } 66267877ebaSShri Abhyankar val[jj++] = v1[idx++]; 66367877ebaSShri Abhyankar } 66467877ebaSShri Abhyankar } 66567877ebaSShri Abhyankar } 66667877ebaSShri Abhyankar 66767877ebaSShri Abhyankar idx = 0; 66867877ebaSShri Abhyankar /* B-part */ 66967877ebaSShri Abhyankar for (k=0; k<countB; k++) { 67067877ebaSShri Abhyankar for (j=0; j<bs; j++) { 67167877ebaSShri Abhyankar for (n=0; n<bs; n++) { 672bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 673d985c460SShri Abhyankar row[jj] = irow + n + shift; 674d985c460SShri Abhyankar col[jj] = bs*garray[bjj[k]] + j + shift; 67567877ebaSShri Abhyankar } 676d985c460SShri Abhyankar val[jj++] = v2[idx++]; 67767877ebaSShri Abhyankar } 67867877ebaSShri Abhyankar } 67967877ebaSShri Abhyankar } 680d985c460SShri Abhyankar irow += bs; 68167877ebaSShri Abhyankar } 68267877ebaSShri Abhyankar PetscFunctionReturn(0); 68367877ebaSShri Abhyankar } 68467877ebaSShri Abhyankar 685bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 68616ebf90aSShri Abhyankar { 68716ebf90aSShri Abhyankar const PetscInt *ai, *aj,*adiag, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 68816ebf90aSShri Abhyankar PetscErrorCode ierr; 689e0bace9bSHong Zhang PetscInt rstart,nz,nza,nzb,i,j,jj,irow,countA,countB; 69016ebf90aSShri Abhyankar PetscInt *row,*col; 69116ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 69216ebf90aSShri Abhyankar PetscScalar *val; 69316ebf90aSShri Abhyankar Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 69416ebf90aSShri Abhyankar Mat_SeqAIJ *aa =(Mat_SeqAIJ*)(mat->A)->data; 69516ebf90aSShri Abhyankar Mat_SeqAIJ *bb =(Mat_SeqAIJ*)(mat->B)->data; 69638548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 69738548759SBarry Smith PetscBool hermitian; 69838548759SBarry Smith #endif 69916ebf90aSShri Abhyankar 70016ebf90aSShri Abhyankar PetscFunctionBegin; 70138548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 70238548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 70338548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 70438548759SBarry Smith #endif 70538548759SBarry Smith ai = aa->i; 70638548759SBarry Smith aj = aa->j; 70738548759SBarry Smith adiag = aa->diag; 70838548759SBarry Smith bi = bb->i; 70938548759SBarry Smith bj = bb->j; 71038548759SBarry Smith garray = mat->garray; 71138548759SBarry Smith av = aa->a; 71238548759SBarry Smith bv = bb->a; 7132205254eSKarl Rupp 71416ebf90aSShri Abhyankar rstart = A->rmap->rstart; 71516ebf90aSShri Abhyankar 716bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 717e0bace9bSHong Zhang nza = 0; /* num of upper triangular entries in mat->A, including diagonals */ 718e0bace9bSHong Zhang nzb = 0; /* num of upper triangular entries in mat->B */ 71916ebf90aSShri Abhyankar for (i=0; i<m; i++) { 720e0bace9bSHong Zhang nza += (ai[i+1] - adiag[i]); 72116ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 72216ebf90aSShri Abhyankar bjj = bj + bi[i]; 723e0bace9bSHong Zhang for (j=0; j<countB; j++) { 724e0bace9bSHong Zhang if (garray[bjj[j]] > rstart) nzb++; 725e0bace9bSHong Zhang } 726e0bace9bSHong Zhang } 72716ebf90aSShri Abhyankar 728e0bace9bSHong Zhang nz = nza + nzb; /* total nz of upper triangular part of mat */ 72916ebf90aSShri Abhyankar *nnz = nz; 730185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 731185f6596SHong Zhang col = row + nz; 732185f6596SHong Zhang val = (PetscScalar*)(col + nz); 733185f6596SHong Zhang 73416ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 73516ebf90aSShri Abhyankar } else { 73616ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 73716ebf90aSShri Abhyankar } 73816ebf90aSShri Abhyankar 73916ebf90aSShri Abhyankar jj = 0; irow = rstart; 74016ebf90aSShri Abhyankar for (i=0; i<m; i++) { 74116ebf90aSShri Abhyankar ajj = aj + adiag[i]; /* ptr to the beginning of the diagonal of this row */ 74216ebf90aSShri Abhyankar v1 = av + adiag[i]; 74316ebf90aSShri Abhyankar countA = ai[i+1] - adiag[i]; 74416ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 74516ebf90aSShri Abhyankar bjj = bj + bi[i]; 74616ebf90aSShri Abhyankar v2 = bv + bi[i]; 74716ebf90aSShri Abhyankar 74816ebf90aSShri Abhyankar /* A-part */ 74916ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 750bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 75116ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 75216ebf90aSShri Abhyankar } 75316ebf90aSShri Abhyankar val[jj++] = v1[j]; 75416ebf90aSShri Abhyankar } 75516ebf90aSShri Abhyankar 75616ebf90aSShri Abhyankar /* B-part */ 75716ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 75816ebf90aSShri Abhyankar if (garray[bjj[j]] > rstart) { 759bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 76016ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 76116ebf90aSShri Abhyankar } 76216ebf90aSShri Abhyankar val[jj++] = v2[j]; 76316ebf90aSShri Abhyankar } 764397b6df1SKris Buschelman } 765397b6df1SKris Buschelman irow++; 766397b6df1SKris Buschelman } 767397b6df1SKris Buschelman PetscFunctionReturn(0); 768397b6df1SKris Buschelman } 769397b6df1SKris Buschelman 770dfbe8321SBarry Smith PetscErrorCode MatDestroy_MUMPS(Mat A) 771dfbe8321SBarry Smith { 772e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 773dfbe8321SBarry Smith PetscErrorCode ierr; 774b24902e0SBarry Smith 775397b6df1SKris Buschelman PetscFunctionBegin; 776a5e57a09SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 777a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_rhs);CHKERRQ(ierr); 778a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 779801fbe65SHong Zhang ierr = VecDestroy(&mumps->b_seq);CHKERRQ(ierr); 780a5e57a09SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 781a5e57a09SHong Zhang ierr = PetscFree(mumps->id.perm_in);CHKERRQ(ierr); 782a5e57a09SHong Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); 783b34f08ffSHong Zhang ierr = PetscFree(mumps->info);CHKERRQ(ierr); 78459ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 785a5e57a09SHong Zhang mumps->id.job = JOB_END; 7863ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 7873ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 7883ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { ierr = PetscOmpCtrlDestroy(&mumps->omp_ctrl);CHKERRQ(ierr); } 7893ab56b82SJunchao Zhang #endif 7903ab56b82SJunchao Zhang ierr = PetscFree2(mumps->recvcount,mumps->displs);CHKERRQ(ierr); 791e69c285eSBarry Smith ierr = PetscFree(A->data);CHKERRQ(ierr); 792bf0cc555SLisandro Dalcin 79397969023SHong Zhang /* clear composed functions */ 7943ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 7955a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSetSchurIS_C",NULL);CHKERRQ(ierr); 7965a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorCreateSchurComplement_C",NULL);CHKERRQ(ierr); 797bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetIcntl_C",NULL);CHKERRQ(ierr); 798bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetIcntl_C",NULL);CHKERRQ(ierr); 799bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetCntl_C",NULL);CHKERRQ(ierr); 800bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetCntl_C",NULL);CHKERRQ(ierr); 801ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfo_C",NULL);CHKERRQ(ierr); 802ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfog_C",NULL);CHKERRQ(ierr); 803ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfo_C",NULL);CHKERRQ(ierr); 804ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfog_C",NULL);CHKERRQ(ierr); 80589a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverse_C",NULL);CHKERRQ(ierr); 8060e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverseTranspose_C",NULL);CHKERRQ(ierr); 807397b6df1SKris Buschelman PetscFunctionReturn(0); 808397b6df1SKris Buschelman } 809397b6df1SKris Buschelman 810b24902e0SBarry Smith PetscErrorCode MatSolve_MUMPS(Mat A,Vec b,Vec x) 811b24902e0SBarry Smith { 812e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 813d54de34fSKris Buschelman PetscScalar *array; 81467877ebaSShri Abhyankar Vec b_seq; 815329ec9b3SHong Zhang IS is_iden,is_petsc; 816dfbe8321SBarry Smith PetscErrorCode ierr; 817329ec9b3SHong Zhang PetscInt i; 818cc86f929SStefano Zampini PetscBool second_solve = PETSC_FALSE; 819883f2eb9SBarry Smith static PetscBool cite1 = PETSC_FALSE,cite2 = PETSC_FALSE; 820397b6df1SKris Buschelman 821397b6df1SKris Buschelman PetscFunctionBegin; 822883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS01,\n author = {P.~R. Amestoy and I.~S. Duff and J.-Y. L'Excellent and J. Koster},\n title = {A fully asynchronous multifrontal solver using distributed dynamic scheduling},\n journal = {SIAM Journal on Matrix Analysis and Applications},\n volume = {23},\n number = {1},\n pages = {15--41},\n year = {2001}\n}\n",&cite1);CHKERRQ(ierr); 823883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS02,\n author = {P.~R. Amestoy and A. Guermouche and J.-Y. L'Excellent and S. Pralet},\n title = {Hybrid scheduling for the parallel solution of linear systems},\n journal = {Parallel Computing},\n volume = {32},\n number = {2},\n pages = {136--156},\n year = {2006}\n}\n",&cite2);CHKERRQ(ierr); 8242aca8efcSHong Zhang 825603e8f96SBarry Smith if (A->factorerrortype) { 8262aca8efcSHong Zhang ierr = PetscInfo2(A,"MatSolve is called with singular matrix factor, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 8272aca8efcSHong Zhang ierr = VecSetInf(x);CHKERRQ(ierr); 8282aca8efcSHong Zhang PetscFunctionReturn(0); 8292aca8efcSHong Zhang } 8302aca8efcSHong Zhang 831be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 832a5e57a09SHong Zhang mumps->id.nrhs = 1; 833a5e57a09SHong Zhang b_seq = mumps->b_seq; 8342d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 835329ec9b3SHong Zhang /* MUMPS only supports centralized rhs. Scatter b into a seqential rhs vector */ 836a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 837a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 838a5e57a09SHong Zhang if (!mumps->myid) {ierr = VecGetArray(b_seq,&array);CHKERRQ(ierr);} 8393ab56b82SJunchao Zhang } else { /* petsc_size == 1 */ 840397b6df1SKris Buschelman ierr = VecCopy(b,x);CHKERRQ(ierr); 841397b6df1SKris Buschelman ierr = VecGetArray(x,&array);CHKERRQ(ierr); 842397b6df1SKris Buschelman } 843a5e57a09SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 844a5e57a09SHong Zhang mumps->id.nrhs = 1; 845940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)array; 846397b6df1SKris Buschelman } 847397b6df1SKris Buschelman 848cc86f929SStefano Zampini /* 849cc86f929SStefano Zampini handle condensation step of Schur complement (if any) 850cc86f929SStefano Zampini We set by default ICNTL(26) == -1 when Schur indices have been provided by the user. 851cc86f929SStefano Zampini According to MUMPS (5.0.0) manual, any value should be harmful during the factorization phase 852cc86f929SStefano Zampini Unless the user provides a valid value for ICNTL(26), MatSolve and MatMatSolve routines solve the full system. 853cc86f929SStefano Zampini This requires an extra call to PetscMUMPS_c and the computation of the factors for S 854cc86f929SStefano Zampini */ 855583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 8562d4298aeSJunchao Zhang if (mumps->petsc_size > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 857cc86f929SStefano Zampini second_solve = PETSC_TRUE; 858b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 859cc86f929SStefano Zampini } 860397b6df1SKris Buschelman /* solve phase */ 861329ec9b3SHong Zhang /*-------------*/ 862a5e57a09SHong Zhang mumps->id.job = JOB_SOLVE; 8633ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 864a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 865397b6df1SKris Buschelman 866b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 867cc86f929SStefano Zampini if (second_solve) { 868b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 869cc86f929SStefano Zampini } 870b5fa320bSStefano Zampini 8712d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { /* convert mumps distributed solution to petsc mpi x */ 872a5e57a09SHong Zhang if (mumps->scat_sol && mumps->ICNTL9_pre != mumps->id.ICNTL(9)) { 873a5e57a09SHong Zhang /* when id.ICNTL(9) changes, the contents of lsol_loc may change (not its size, lsol_loc), recreates scat_sol */ 874a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 875397b6df1SKris Buschelman } 876a5e57a09SHong Zhang if (!mumps->scat_sol) { /* create scatter scat_sol */ 877a5e57a09SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,mumps->id.lsol_loc,0,1,&is_iden);CHKERRQ(ierr); /* from */ 878a5e57a09SHong Zhang for (i=0; i<mumps->id.lsol_loc; i++) { 879a5e57a09SHong Zhang mumps->id.isol_loc[i] -= 1; /* change Fortran style to C style */ 880a5e57a09SHong Zhang } 881a5e57a09SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,mumps->id.lsol_loc,mumps->id.isol_loc,PETSC_COPY_VALUES,&is_petsc);CHKERRQ(ierr); /* to */ 8829448b7f1SJunchao Zhang ierr = VecScatterCreate(mumps->x_seq,is_iden,x,is_petsc,&mumps->scat_sol);CHKERRQ(ierr); 8836bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 8846bf464f9SBarry Smith ierr = ISDestroy(&is_petsc);CHKERRQ(ierr); 8852205254eSKarl Rupp 886a5e57a09SHong Zhang mumps->ICNTL9_pre = mumps->id.ICNTL(9); /* save current value of id.ICNTL(9) */ 887397b6df1SKris Buschelman } 888a5e57a09SHong Zhang 889a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 890a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 891329ec9b3SHong Zhang } 892353d7d71SJunchao Zhang 893353d7d71SJunchao Zhang if (mumps->petsc_size > 1) {if (!mumps->myid) {ierr = VecRestoreArray(b_seq,&array);CHKERRQ(ierr);}} 894353d7d71SJunchao Zhang else {ierr = VecRestoreArray(x,&array);CHKERRQ(ierr);} 895353d7d71SJunchao Zhang 8969880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*mumps->id.RINFO(3));CHKERRQ(ierr); 897397b6df1SKris Buschelman PetscFunctionReturn(0); 898397b6df1SKris Buschelman } 899397b6df1SKris Buschelman 90051d5961aSHong Zhang PetscErrorCode MatSolveTranspose_MUMPS(Mat A,Vec b,Vec x) 90151d5961aSHong Zhang { 902e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 90351d5961aSHong Zhang PetscErrorCode ierr; 90451d5961aSHong Zhang 90551d5961aSHong Zhang PetscFunctionBegin; 906a5e57a09SHong Zhang mumps->id.ICNTL(9) = 0; 9070ad0caddSJed Brown ierr = MatSolve_MUMPS(A,b,x);CHKERRQ(ierr); 908a5e57a09SHong Zhang mumps->id.ICNTL(9) = 1; 90951d5961aSHong Zhang PetscFunctionReturn(0); 91051d5961aSHong Zhang } 91151d5961aSHong Zhang 912e0b74bf9SHong Zhang PetscErrorCode MatMatSolve_MUMPS(Mat A,Mat B,Mat X) 913e0b74bf9SHong Zhang { 914bda8bf91SBarry Smith PetscErrorCode ierr; 915b8491c3eSStefano Zampini Mat Bt = NULL; 916b8491c3eSStefano Zampini PetscBool flg, flgT; 917e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 918334c5f61SHong Zhang PetscInt i,nrhs,M; 9191683a169SBarry Smith PetscScalar *array; 9201683a169SBarry Smith const PetscScalar *rbray; 9215b7de3c2SKarl Rupp PetscInt lsol_loc,nlsol_loc,*isol_loc,*idxx,*isol_loc_save,iidx = 0; 9221683a169SBarry Smith PetscScalar *bray,*sol_loc,*sol_loc_save; 923be818407SHong Zhang IS is_to,is_from; 924beae5ec0SHong Zhang PetscInt k,proc,j,m,myrstart; 925be818407SHong Zhang const PetscInt *rstart; 926beae5ec0SHong Zhang Vec v_mpi,b_seq,msol_loc; 927be818407SHong Zhang VecScatter scat_rhs,scat_sol; 928be818407SHong Zhang PetscScalar *aa; 929be818407SHong Zhang PetscInt spnr,*ia,*ja; 930d56c302dSHong Zhang Mat_MPIAIJ *b = NULL; 931bda8bf91SBarry Smith 932e0b74bf9SHong Zhang PetscFunctionBegin; 933be818407SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)X,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 934be818407SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_ARG_WRONG,"Matrix X must be MATDENSE matrix"); 935be818407SHong Zhang 9360298fd71SBarry Smith ierr = PetscObjectTypeCompareAny((PetscObject)B,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 937be818407SHong Zhang if (flg) { /* dense B */ 938c0be3364SHong Zhang if (B->rmap->n != X->rmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Matrix B and X must have same row distribution"); 939be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 9400e6b8875SHong Zhang } else { /* sparse B */ 941be818407SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)B,MATTRANSPOSEMAT,&flgT);CHKERRQ(ierr); 9420e6b8875SHong Zhang if (flgT) { /* input B is transpose of actural RHS matrix, 9430e6b8875SHong Zhang because mumps requires sparse compressed COLUMN storage! See MatMatTransposeSolve_MUMPS() */ 944be818407SHong Zhang ierr = MatTransposeGetMat(B,&Bt);CHKERRQ(ierr); 9450f52d626SJunchao Zhang } else SETERRQ(PetscObjectComm((PetscObject)B),PETSC_ERR_ARG_WRONG,"Matrix B must be MATTRANSPOSEMAT matrix"); 946be818407SHong Zhang mumps->id.ICNTL(20)= 1; /* sparse RHS */ 947b8491c3eSStefano Zampini } 94887b22cf4SHong Zhang 9499481e6e9SHong Zhang ierr = MatGetSize(B,&M,&nrhs);CHKERRQ(ierr); 9509481e6e9SHong Zhang mumps->id.nrhs = nrhs; 9519481e6e9SHong Zhang mumps->id.lrhs = M; 9522b691707SHong Zhang mumps->id.rhs = NULL; 9539481e6e9SHong Zhang 9542d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 955b8491c3eSStefano Zampini PetscScalar *aa; 956b8491c3eSStefano Zampini PetscInt spnr,*ia,*ja; 957e94cce23SStefano Zampini PetscBool second_solve = PETSC_FALSE; 958b8491c3eSStefano Zampini 9592cd7d884SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 960b8491c3eSStefano Zampini mumps->id.rhs = (MumpsScalar*)array; 9612b691707SHong Zhang 9622b691707SHong Zhang if (!Bt) { /* dense B */ 9632b691707SHong Zhang /* copy B to X */ 9641683a169SBarry Smith ierr = MatDenseGetArrayRead(B,&rbray);CHKERRQ(ierr); 965580bdb30SBarry Smith ierr = PetscArraycpy(array,rbray,M*nrhs);CHKERRQ(ierr); 9661683a169SBarry Smith ierr = MatDenseRestoreArrayRead(B,&rbray);CHKERRQ(ierr); 9672b691707SHong Zhang } else { /* sparse B */ 968b8491c3eSStefano Zampini ierr = MatSeqAIJGetArray(Bt,&aa);CHKERRQ(ierr); 969be818407SHong Zhang ierr = MatGetRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 970c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 9712b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 972b8491c3eSStefano Zampini mumps->id.irhs_ptr = ia; 973b8491c3eSStefano Zampini mumps->id.irhs_sparse = ja; 974b8491c3eSStefano Zampini mumps->id.nz_rhs = ia[spnr] - 1; 975b8491c3eSStefano Zampini mumps->id.rhs_sparse = (MumpsScalar*)aa; 976b8491c3eSStefano Zampini } 977e94cce23SStefano Zampini /* handle condensation step of Schur complement (if any) */ 978583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 979e94cce23SStefano Zampini second_solve = PETSC_TRUE; 980b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 981e94cce23SStefano Zampini } 9822cd7d884SHong Zhang /* solve phase */ 9832cd7d884SHong Zhang /*-------------*/ 9842cd7d884SHong Zhang mumps->id.job = JOB_SOLVE; 9853ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 9862cd7d884SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 987b5fa320bSStefano Zampini 988b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 989e94cce23SStefano Zampini if (second_solve) { 990b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 991e94cce23SStefano Zampini } 9922b691707SHong Zhang if (Bt) { /* sparse B */ 993b8491c3eSStefano Zampini ierr = MatSeqAIJRestoreArray(Bt,&aa);CHKERRQ(ierr); 994be818407SHong Zhang ierr = MatRestoreRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 995c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 996b8491c3eSStefano Zampini } 9972cd7d884SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 998be818407SHong Zhang PetscFunctionReturn(0); 999be818407SHong Zhang } 1000801fbe65SHong Zhang 1001be818407SHong Zhang /*--------- parallel case: MUMPS requires rhs B to be centralized on the host! --------*/ 10022d4298aeSJunchao Zhang if (mumps->petsc_size > 1 && mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 1003241dbb5eSStefano Zampini 1004beae5ec0SHong Zhang /* create msol_loc to hold mumps local solution */ 10051683a169SBarry Smith isol_loc_save = mumps->id.isol_loc; /* save it for MatSolve() */ 10061683a169SBarry Smith sol_loc_save = (PetscScalar*)mumps->id.sol_loc; 1007801fbe65SHong Zhang 1008a1dfcbd9SJunchao Zhang lsol_loc = mumps->id.lsol_loc; 100971aed81dSHong Zhang nlsol_loc = nrhs*lsol_loc; /* length of sol_loc */ 1010a1dfcbd9SJunchao Zhang ierr = PetscMalloc2(nlsol_loc,&sol_loc,lsol_loc,&isol_loc);CHKERRQ(ierr); 1011940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 1012801fbe65SHong Zhang mumps->id.isol_loc = isol_loc; 1013801fbe65SHong Zhang 1014beae5ec0SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,nlsol_loc,(PetscScalar*)sol_loc,&msol_loc);CHKERRQ(ierr); 10152cd7d884SHong Zhang 10162b691707SHong Zhang if (!Bt) { /* dense B */ 1017beae5ec0SHong Zhang /* scatter v_mpi to b_seq because MUMPS only supports centralized rhs */ 1018be818407SHong Zhang /* wrap dense rhs matrix B into a vector v_mpi */ 10192b691707SHong Zhang ierr = MatGetLocalSize(B,&m,NULL);CHKERRQ(ierr); 10202b691707SHong Zhang ierr = MatDenseGetArray(B,&bray);CHKERRQ(ierr); 10212b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)B),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 10222b691707SHong Zhang ierr = MatDenseRestoreArray(B,&bray);CHKERRQ(ierr); 10232b691707SHong Zhang 1024be818407SHong Zhang /* scatter v_mpi to b_seq in proc[0]. MUMPS requires rhs to be centralized on the host! */ 1025801fbe65SHong Zhang if (!mumps->myid) { 1026beae5ec0SHong Zhang PetscInt *idx; 1027beae5ec0SHong Zhang /* idx: maps from k-th index of v_mpi to (i,j)-th global entry of B */ 1028beae5ec0SHong Zhang ierr = PetscMalloc1(nrhs*M,&idx);CHKERRQ(ierr); 1029be818407SHong Zhang ierr = MatGetOwnershipRanges(B,&rstart);CHKERRQ(ierr); 1030be818407SHong Zhang k = 0; 10312d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 1032be818407SHong Zhang for (j=0; j<nrhs; j++){ 1033beae5ec0SHong Zhang for (i=rstart[proc]; i<rstart[proc+1]; i++) idx[k++] = j*M + i; 1034be818407SHong Zhang } 1035be818407SHong Zhang } 1036be818407SHong Zhang 1037334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,nrhs*M,&b_seq);CHKERRQ(ierr); 1038beae5ec0SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nrhs*M,idx,PETSC_OWN_POINTER,&is_to);CHKERRQ(ierr); 1039801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nrhs*M,0,1,&is_from);CHKERRQ(ierr); 1040801fbe65SHong Zhang } else { 1041334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&b_seq);CHKERRQ(ierr); 1042801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_to);CHKERRQ(ierr); 1043801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_from);CHKERRQ(ierr); 1044801fbe65SHong Zhang } 10459448b7f1SJunchao Zhang ierr = VecScatterCreate(v_mpi,is_from,b_seq,is_to,&scat_rhs);CHKERRQ(ierr); 1046334c5f61SHong Zhang ierr = VecScatterBegin(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1047801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1048801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1049334c5f61SHong Zhang ierr = VecScatterEnd(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1050801fbe65SHong Zhang 1051801fbe65SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 1052334c5f61SHong Zhang ierr = VecGetArray(b_seq,&bray);CHKERRQ(ierr); 1053940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)bray; 1054334c5f61SHong Zhang ierr = VecRestoreArray(b_seq,&bray);CHKERRQ(ierr); 1055801fbe65SHong Zhang } 1056801fbe65SHong Zhang 10572b691707SHong Zhang } else { /* sparse B */ 10582b691707SHong Zhang b = (Mat_MPIAIJ*)Bt->data; 10592b691707SHong Zhang 1060be818407SHong Zhang /* wrap dense X into a vector v_mpi */ 10612b691707SHong Zhang ierr = MatGetLocalSize(X,&m,NULL);CHKERRQ(ierr); 10622b691707SHong Zhang ierr = MatDenseGetArray(X,&bray);CHKERRQ(ierr); 10632b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)X),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 10642b691707SHong Zhang ierr = MatDenseRestoreArray(X,&bray);CHKERRQ(ierr); 10652b691707SHong Zhang 10662b691707SHong Zhang if (!mumps->myid) { 10672b691707SHong Zhang ierr = MatSeqAIJGetArray(b->A,&aa);CHKERRQ(ierr); 1068be818407SHong Zhang ierr = MatGetRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1069c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 10702b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 10712b691707SHong Zhang mumps->id.irhs_ptr = ia; 10722b691707SHong Zhang mumps->id.irhs_sparse = ja; 10732b691707SHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 10742b691707SHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 10752b691707SHong Zhang } else { 10762b691707SHong Zhang mumps->id.irhs_ptr = NULL; 10772b691707SHong Zhang mumps->id.irhs_sparse = NULL; 10782b691707SHong Zhang mumps->id.nz_rhs = 0; 10792b691707SHong Zhang mumps->id.rhs_sparse = NULL; 10802b691707SHong Zhang } 10812b691707SHong Zhang } 10822b691707SHong Zhang 1083801fbe65SHong Zhang /* solve phase */ 1084801fbe65SHong Zhang /*-------------*/ 1085801fbe65SHong Zhang mumps->id.job = JOB_SOLVE; 10863ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1087801fbe65SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 1088801fbe65SHong Zhang 1089334c5f61SHong Zhang /* scatter mumps distributed solution to petsc vector v_mpi, which shares local arrays with solution matrix X */ 109074f0fcc7SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 109174f0fcc7SHong Zhang ierr = VecPlaceArray(v_mpi,array);CHKERRQ(ierr); 1092801fbe65SHong Zhang 1093334c5f61SHong Zhang /* create scatter scat_sol */ 1094be818407SHong Zhang ierr = MatGetOwnershipRanges(X,&rstart);CHKERRQ(ierr); 1095beae5ec0SHong Zhang /* iidx: index for scatter mumps solution to petsc X */ 1096beae5ec0SHong Zhang 1097beae5ec0SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nlsol_loc,0,1,&is_from);CHKERRQ(ierr); 1098beae5ec0SHong Zhang ierr = PetscMalloc1(nlsol_loc,&idxx);CHKERRQ(ierr); 1099beae5ec0SHong Zhang for (i=0; i<lsol_loc; i++) { 1100beae5ec0SHong Zhang isol_loc[i] -= 1; /* change Fortran style to C style. isol_loc[i+j*lsol_loc] contains x[isol_loc[i]] in j-th vector */ 1101beae5ec0SHong Zhang 11022d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 1103beae5ec0SHong Zhang if (isol_loc[i] >= rstart[proc] && isol_loc[i] < rstart[proc+1]) { 1104beae5ec0SHong Zhang myrstart = rstart[proc]; 1105beae5ec0SHong Zhang k = isol_loc[i] - myrstart; /* local index on 1st column of petsc vector X */ 1106beae5ec0SHong Zhang iidx = k + myrstart*nrhs; /* maps mumps isol_loc[i] to petsc index in X */ 1107beae5ec0SHong Zhang m = rstart[proc+1] - rstart[proc]; /* rows of X for this proc */ 1108beae5ec0SHong Zhang break; 1109be818407SHong Zhang } 1110be818407SHong Zhang } 1111be818407SHong Zhang 1112beae5ec0SHong Zhang for (j=0; j<nrhs; j++) idxx[i+j*lsol_loc] = iidx + j*m; 1113801fbe65SHong Zhang } 1114be818407SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nlsol_loc,idxx,PETSC_COPY_VALUES,&is_to);CHKERRQ(ierr); 1115beae5ec0SHong Zhang ierr = VecScatterCreate(msol_loc,is_from,v_mpi,is_to,&scat_sol);CHKERRQ(ierr); 1116beae5ec0SHong Zhang ierr = VecScatterBegin(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1117801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1118801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1119beae5ec0SHong Zhang ierr = VecScatterEnd(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1120801fbe65SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 112171aed81dSHong Zhang 112271aed81dSHong Zhang /* free spaces */ 11231683a169SBarry Smith mumps->id.sol_loc = (MumpsScalar*)sol_loc_save; 112471aed81dSHong Zhang mumps->id.isol_loc = isol_loc_save; 112571aed81dSHong Zhang 112671aed81dSHong Zhang ierr = PetscFree2(sol_loc,isol_loc);CHKERRQ(ierr); 1127801fbe65SHong Zhang ierr = PetscFree(idxx);CHKERRQ(ierr); 1128beae5ec0SHong Zhang ierr = VecDestroy(&msol_loc);CHKERRQ(ierr); 112974f0fcc7SHong Zhang ierr = VecDestroy(&v_mpi);CHKERRQ(ierr); 11302b691707SHong Zhang if (Bt) { 11312b691707SHong Zhang if (!mumps->myid) { 1132d56c302dSHong Zhang b = (Mat_MPIAIJ*)Bt->data; 11332b691707SHong Zhang ierr = MatSeqAIJRestoreArray(b->A,&aa);CHKERRQ(ierr); 1134be818407SHong Zhang ierr = MatRestoreRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1135c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 11362b691707SHong Zhang } 11372b691707SHong Zhang } else { 1138334c5f61SHong Zhang ierr = VecDestroy(&b_seq);CHKERRQ(ierr); 1139334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_rhs);CHKERRQ(ierr); 11402b691707SHong Zhang } 1141334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_sol);CHKERRQ(ierr); 11429880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*nrhs*mumps->id.RINFO(3));CHKERRQ(ierr); 1143e0b74bf9SHong Zhang PetscFunctionReturn(0); 1144e0b74bf9SHong Zhang } 1145e0b74bf9SHong Zhang 1146eb3ef3b2SHong Zhang PetscErrorCode MatMatTransposeSolve_MUMPS(Mat A,Mat Bt,Mat X) 1147eb3ef3b2SHong Zhang { 1148eb3ef3b2SHong Zhang PetscErrorCode ierr; 1149eb3ef3b2SHong Zhang PetscBool flg; 1150eb3ef3b2SHong Zhang Mat B; 1151eb3ef3b2SHong Zhang 1152eb3ef3b2SHong Zhang PetscFunctionBegin; 1153eb3ef3b2SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)Bt,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 1154eb3ef3b2SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)Bt),PETSC_ERR_ARG_WRONG,"Matrix Bt must be MATAIJ matrix"); 1155eb3ef3b2SHong Zhang 1156eb3ef3b2SHong Zhang /* Create B=Bt^T that uses Bt's data structure */ 1157eb3ef3b2SHong Zhang ierr = MatCreateTranspose(Bt,&B);CHKERRQ(ierr); 1158eb3ef3b2SHong Zhang 11590e6b8875SHong Zhang ierr = MatMatSolve_MUMPS(A,B,X);CHKERRQ(ierr); 1160eb3ef3b2SHong Zhang ierr = MatDestroy(&B);CHKERRQ(ierr); 1161eb3ef3b2SHong Zhang PetscFunctionReturn(0); 1162eb3ef3b2SHong Zhang } 1163eb3ef3b2SHong Zhang 1164ace3df97SHong Zhang #if !defined(PETSC_USE_COMPLEX) 1165a58c3f20SHong Zhang /* 1166a58c3f20SHong Zhang input: 1167a58c3f20SHong Zhang F: numeric factor 1168a58c3f20SHong Zhang output: 1169a58c3f20SHong Zhang nneg: total number of negative pivots 117019d49a3bSHong Zhang nzero: total number of zero pivots 117119d49a3bSHong Zhang npos: (global dimension of F) - nneg - nzero 1172a58c3f20SHong Zhang */ 1173dfbe8321SBarry Smith PetscErrorCode MatGetInertia_SBAIJMUMPS(Mat F,int *nneg,int *nzero,int *npos) 1174a58c3f20SHong Zhang { 1175e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1176dfbe8321SBarry Smith PetscErrorCode ierr; 1177c1490034SHong Zhang PetscMPIInt size; 1178a58c3f20SHong Zhang 1179a58c3f20SHong Zhang PetscFunctionBegin; 1180ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)F),&size);CHKERRQ(ierr); 1181bcb30aebSHong Zhang /* MUMPS 4.3.1 calls ScaLAPACK when ICNTL(13)=0 (default), which does not offer the possibility to compute the inertia of a dense matrix. Set ICNTL(13)=1 to skip ScaLAPACK */ 1182a5e57a09SHong Zhang if (size > 1 && mumps->id.ICNTL(13) != 1) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"ICNTL(13)=%d. -mat_mumps_icntl_13 must be set as 1 for correct global matrix inertia\n",mumps->id.INFOG(13)); 1183ed85ac9fSHong Zhang 1184710ac8efSHong Zhang if (nneg) *nneg = mumps->id.INFOG(12); 1185ed85ac9fSHong Zhang if (nzero || npos) { 1186ed85ac9fSHong Zhang if (mumps->id.ICNTL(24) != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"-mat_mumps_icntl_24 must be set as 1 for null pivot row detection"); 1187710ac8efSHong Zhang if (nzero) *nzero = mumps->id.INFOG(28); 1188710ac8efSHong Zhang if (npos) *npos = F->rmap->N - (mumps->id.INFOG(12) + mumps->id.INFOG(28)); 1189a58c3f20SHong Zhang } 1190a58c3f20SHong Zhang PetscFunctionReturn(0); 1191a58c3f20SHong Zhang } 119219d49a3bSHong Zhang #endif 1193a58c3f20SHong Zhang 11943ab56b82SJunchao Zhang PetscErrorCode MatMumpsGatherNonzerosOnMaster(MatReuse reuse,Mat_MUMPS *mumps) 11953ab56b82SJunchao Zhang { 11963ab56b82SJunchao Zhang PetscErrorCode ierr; 11976ac9f4daSSatish Balay PetscInt i,nz=0,*irn,*jcn=0; 11986ac9f4daSSatish Balay PetscScalar *val=0; 11993ab56b82SJunchao Zhang PetscMPIInt mpinz,*recvcount=NULL,*displs=NULL; 12003ab56b82SJunchao Zhang 12013ab56b82SJunchao Zhang PetscFunctionBegin; 12023ab56b82SJunchao Zhang if (mumps->omp_comm_size > 1) { 12033ab56b82SJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { 12043ab56b82SJunchao Zhang /* master first gathers counts of nonzeros to receive */ 12053ab56b82SJunchao Zhang if (mumps->is_omp_master) { ierr = PetscMalloc2(mumps->omp_comm_size,&recvcount,mumps->omp_comm_size,&displs);CHKERRQ(ierr); } 12063ab56b82SJunchao Zhang ierr = PetscMPIIntCast(mumps->nz,&mpinz);CHKERRQ(ierr); 12073ab56b82SJunchao Zhang ierr = MPI_Gather(&mpinz,1,MPI_INT,recvcount,1,MPI_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12083ab56b82SJunchao Zhang 12093ab56b82SJunchao Zhang /* master allocates memory to receive nonzeros */ 12103ab56b82SJunchao Zhang if (mumps->is_omp_master) { 12113ab56b82SJunchao Zhang displs[0] = 0; 12123ab56b82SJunchao Zhang for (i=1; i<mumps->omp_comm_size; i++) displs[i] = displs[i-1] + recvcount[i-1]; 12133ab56b82SJunchao Zhang nz = displs[mumps->omp_comm_size-1] + recvcount[mumps->omp_comm_size-1]; 12143ab56b82SJunchao Zhang ierr = PetscMalloc(2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar),&irn);CHKERRQ(ierr); 12153ab56b82SJunchao Zhang jcn = irn + nz; 12163ab56b82SJunchao Zhang val = (PetscScalar*)(jcn + nz); 12173ab56b82SJunchao Zhang } 12183ab56b82SJunchao Zhang 12193ab56b82SJunchao Zhang /* save the gatherv plan */ 12203ab56b82SJunchao Zhang mumps->mpinz = mpinz; /* used as send count */ 12213ab56b82SJunchao Zhang mumps->recvcount = recvcount; 12223ab56b82SJunchao Zhang mumps->displs = displs; 12233ab56b82SJunchao Zhang 12243ab56b82SJunchao Zhang /* master gathers nonzeros */ 12253ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->irn,mpinz,MPIU_INT,irn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12263ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->jcn,mpinz,MPIU_INT,jcn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12273ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->val,mpinz,MPIU_SCALAR,val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12283ab56b82SJunchao Zhang 12293ab56b82SJunchao Zhang /* master frees its row/col/val and replaces them with bigger arrays */ 12303ab56b82SJunchao Zhang if (mumps->is_omp_master) { 12313ab56b82SJunchao Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); /* irn/jcn/val are allocated together so free only irn */ 12323ab56b82SJunchao Zhang mumps->nz = nz; /* it is a sum of mpinz over omp_comm */ 12333ab56b82SJunchao Zhang mumps->irn = irn; 12343ab56b82SJunchao Zhang mumps->jcn = jcn; 12353ab56b82SJunchao Zhang mumps->val = val; 12363ab56b82SJunchao Zhang } 12373ab56b82SJunchao Zhang } else { 12383ab56b82SJunchao Zhang ierr = MPI_Gatherv((mumps->is_omp_master?MPI_IN_PLACE:mumps->val),mumps->mpinz,MPIU_SCALAR,mumps->val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12393ab56b82SJunchao Zhang } 12403ab56b82SJunchao Zhang } 12413ab56b82SJunchao Zhang PetscFunctionReturn(0); 12423ab56b82SJunchao Zhang } 12433ab56b82SJunchao Zhang 12440481f469SBarry Smith PetscErrorCode MatFactorNumeric_MUMPS(Mat F,Mat A,const MatFactorInfo *info) 1245af281ebdSHong Zhang { 1246e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)(F)->data; 12476849ba73SBarry Smith PetscErrorCode ierr; 1248ace3abfcSBarry Smith PetscBool isMPIAIJ; 1249397b6df1SKris Buschelman 1250397b6df1SKris Buschelman PetscFunctionBegin; 12516baea169SHong Zhang if (mumps->id.INFOG(1) < 0) { 12522aca8efcSHong Zhang if (mumps->id.INFOG(1) == -6) { 12532aca8efcSHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called with singular matrix structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 12546baea169SHong Zhang } 12556baea169SHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called after analysis phase fails, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 12562aca8efcSHong Zhang PetscFunctionReturn(0); 12572aca8efcSHong Zhang } 12586baea169SHong Zhang 1259a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_REUSE_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 12603ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_REUSE_MATRIX,mumps);CHKERRQ(ierr); 1261397b6df1SKris Buschelman 1262397b6df1SKris Buschelman /* numerical factorization phase */ 1263329ec9b3SHong Zhang /*-------------------------------*/ 1264a5e57a09SHong Zhang mumps->id.job = JOB_FACTNUMERIC; 12654e34a73bSHong Zhang if (!mumps->id.ICNTL(18)) { /* A is centralized */ 1266a5e57a09SHong Zhang if (!mumps->myid) { 1267940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 1268397b6df1SKris Buschelman } 1269397b6df1SKris Buschelman } else { 1270940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 1271397b6df1SKris Buschelman } 12723ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1273a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) { 1274c0d63f2fSHong Zhang if (A->erroriffailure) { 1275c0d63f2fSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 1276151787a6SHong Zhang } else { 1277c0d63f2fSHong Zhang if (mumps->id.INFOG(1) == -10) { /* numerically singular matrix */ 12782aca8efcSHong Zhang ierr = PetscInfo2(F,"matrix is numerically singular, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1279603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 1280c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -13) { 1281c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, cannot allocate required memory %d megabytes\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1282603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 1283c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -8 || mumps->id.INFOG(1) == -9 || (-16 < mumps->id.INFOG(1) && mumps->id.INFOG(1) < -10) ) { 1284c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d, problem with workarray \n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1285603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 12862aca8efcSHong Zhang } else { 1287c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1288603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 1289151787a6SHong Zhang } 12902aca8efcSHong Zhang } 1291397b6df1SKris Buschelman } 1292a5e57a09SHong Zhang if (!mumps->myid && mumps->id.ICNTL(16) > 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB," mumps->id.ICNTL(16):=%d\n",mumps->id.INFOG(16)); 1293397b6df1SKris Buschelman 1294b3cb21ddSStefano Zampini F->assembled = PETSC_TRUE; 1295a5e57a09SHong Zhang mumps->matstruc = SAME_NONZERO_PATTERN; 1296b3cb21ddSStefano Zampini if (F->schur) { /* reset Schur status to unfactored */ 1297*3cb7dd0eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 1298*3cb7dd0eSStefano Zampini F->schur->valid_GPU_matrix = PETSC_OFFLOAD_CPU; 1299*3cb7dd0eSStefano Zampini #endif 1300b3cb21ddSStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 1301b3cb21ddSStefano Zampini mumps->id.ICNTL(19) = 2; 1302b3cb21ddSStefano Zampini ierr = MatTranspose(F->schur,MAT_INPLACE_MATRIX,&F->schur);CHKERRQ(ierr); 1303b3cb21ddSStefano Zampini } 1304b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,NULL,MAT_FACTOR_SCHUR_UNFACTORED);CHKERRQ(ierr); 1305b3cb21ddSStefano Zampini } 130667877ebaSShri Abhyankar 1307066565c5SStefano Zampini /* just to be sure that ICNTL(19) value returned by a call from MatMumpsGetIcntl is always consistent */ 1308066565c5SStefano Zampini if (!mumps->sym && mumps->id.ICNTL(19) && mumps->id.ICNTL(19) != 1) mumps->id.ICNTL(19) = 3; 1309066565c5SStefano Zampini 13103ab56b82SJunchao Zhang if (!mumps->is_omp_master) mumps->id.INFO(23) = 0; 13112d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 131267877ebaSShri Abhyankar PetscInt lsol_loc; 131367877ebaSShri Abhyankar PetscScalar *sol_loc; 13142205254eSKarl Rupp 1315c2093ab7SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&isMPIAIJ);CHKERRQ(ierr); 1316c2093ab7SHong Zhang 1317c2093ab7SHong Zhang /* distributed solution; Create x_seq=sol_loc for repeated use */ 1318c2093ab7SHong Zhang if (mumps->x_seq) { 1319c2093ab7SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 1320c2093ab7SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 1321c2093ab7SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 1322c2093ab7SHong Zhang } 1323a5e57a09SHong Zhang lsol_loc = mumps->id.INFO(23); /* length of sol_loc */ 1324dcca6d9dSJed Brown ierr = PetscMalloc2(lsol_loc,&sol_loc,lsol_loc,&mumps->id.isol_loc);CHKERRQ(ierr); 1325a5e57a09SHong Zhang mumps->id.lsol_loc = lsol_loc; 1326940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 1327a5e57a09SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,lsol_loc,sol_loc,&mumps->x_seq);CHKERRQ(ierr); 132867877ebaSShri Abhyankar } 13299880c9b4SStefano Zampini ierr = PetscLogFlops(mumps->id.RINFO(2));CHKERRQ(ierr); 1330397b6df1SKris Buschelman PetscFunctionReturn(0); 1331397b6df1SKris Buschelman } 1332397b6df1SKris Buschelman 13339a2535b5SHong Zhang /* Sets MUMPS options from the options database */ 13349a2535b5SHong Zhang PetscErrorCode PetscSetMUMPSFromOptions(Mat F, Mat A) 1335dcd589f8SShri Abhyankar { 1336e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1337dcd589f8SShri Abhyankar PetscErrorCode ierr; 1338a0e18203SThibaut Appel PetscInt icntl,info[80],i,ninfo=80; 1339ace3abfcSBarry Smith PetscBool flg; 1340dcd589f8SShri Abhyankar 1341dcd589f8SShri Abhyankar PetscFunctionBegin; 1342ce94432eSBarry Smith ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MUMPS Options","Mat");CHKERRQ(ierr); 13439a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_1","ICNTL(1): output stream for error messages","None",mumps->id.ICNTL(1),&icntl,&flg);CHKERRQ(ierr); 13449a2535b5SHong Zhang if (flg) mumps->id.ICNTL(1) = icntl; 13459a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_2","ICNTL(2): output stream for diagnostic printing, statistics, and warning","None",mumps->id.ICNTL(2),&icntl,&flg);CHKERRQ(ierr); 13469a2535b5SHong Zhang if (flg) mumps->id.ICNTL(2) = icntl; 13479a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_3","ICNTL(3): output stream for global information, collected on the host","None",mumps->id.ICNTL(3),&icntl,&flg);CHKERRQ(ierr); 13489a2535b5SHong Zhang if (flg) mumps->id.ICNTL(3) = icntl; 1349dcd589f8SShri Abhyankar 13509a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_4","ICNTL(4): level of printing (0 to 4)","None",mumps->id.ICNTL(4),&icntl,&flg);CHKERRQ(ierr); 13519a2535b5SHong Zhang if (flg) mumps->id.ICNTL(4) = icntl; 13529a2535b5SHong Zhang if (mumps->id.ICNTL(4) || PetscLogPrintInfo) mumps->id.ICNTL(3) = 6; /* resume MUMPS default id.ICNTL(3) = 6 */ 13539a2535b5SHong Zhang 1354d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_6","ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7)","None",mumps->id.ICNTL(6),&icntl,&flg);CHKERRQ(ierr); 13559a2535b5SHong Zhang if (flg) mumps->id.ICNTL(6) = icntl; 13569a2535b5SHong Zhang 1357d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_7","ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis","None",mumps->id.ICNTL(7),&icntl,&flg);CHKERRQ(ierr); 1358dcd589f8SShri Abhyankar if (flg) { 13592d4298aeSJunchao Zhang if (icntl== 1 && mumps->petsc_size > 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"pivot order be set by the user in PERM_IN -- not supported by the PETSc/MUMPS interface\n"); 13602205254eSKarl Rupp else mumps->id.ICNTL(7) = icntl; 1361dcd589f8SShri Abhyankar } 1362e0b74bf9SHong Zhang 13630298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_8","ICNTL(8): scaling strategy (-2 to 8 or 77)","None",mumps->id.ICNTL(8),&mumps->id.ICNTL(8),NULL);CHKERRQ(ierr); 1364d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_9","ICNTL(9): computes the solution using A or A^T","None",mumps->id.ICNTL(9),&mumps->id.ICNTL(9),NULL);CHKERRQ(ierr); handled by MatSolveTranspose_MUMPS() */ 13650298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_10","ICNTL(10): max num of refinements","None",mumps->id.ICNTL(10),&mumps->id.ICNTL(10),NULL);CHKERRQ(ierr); 1366d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_11","ICNTL(11): statistics related to an error analysis (via -ksp_view)","None",mumps->id.ICNTL(11),&mumps->id.ICNTL(11),NULL);CHKERRQ(ierr); 1367d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_12","ICNTL(12): an ordering strategy for symmetric matrices (0 to 3)","None",mumps->id.ICNTL(12),&mumps->id.ICNTL(12),NULL);CHKERRQ(ierr); 1368d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_13","ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting","None",mumps->id.ICNTL(13),&mumps->id.ICNTL(13),NULL);CHKERRQ(ierr); 1369d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_14","ICNTL(14): percentage increase in the estimated working space","None",mumps->id.ICNTL(14),&mumps->id.ICNTL(14),NULL);CHKERRQ(ierr); 1370d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_19","ICNTL(19): computes the Schur complement","None",mumps->id.ICNTL(19),&mumps->id.ICNTL(19),NULL);CHKERRQ(ierr); 137159ac8732SStefano Zampini if (mumps->id.ICNTL(19) <= 0 || mumps->id.ICNTL(19) > 3) { /* reset any schur data (if any) */ 1372b3cb21ddSStefano Zampini ierr = MatDestroy(&F->schur);CHKERRQ(ierr); 137359ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 137459ac8732SStefano Zampini } 13754e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_20","ICNTL(20): the format (dense or sparse) of the right-hand sides","None",mumps->id.ICNTL(20),&mumps->id.ICNTL(20),NULL);CHKERRQ(ierr); -- sparse rhs is not supported in PETSc API */ 1376d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_21","ICNTL(21): the distribution (centralized or distributed) of the solution vectors","None",mumps->id.ICNTL(21),&mumps->id.ICNTL(21),NULL);CHKERRQ(ierr); we only use distributed solution vector */ 13779a2535b5SHong Zhang 1378d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_22","ICNTL(22): in-core/out-of-core factorization and solve (0 or 1)","None",mumps->id.ICNTL(22),&mumps->id.ICNTL(22),NULL);CHKERRQ(ierr); 13790298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_23","ICNTL(23): max size of the working memory (MB) that can allocate per processor","None",mumps->id.ICNTL(23),&mumps->id.ICNTL(23),NULL);CHKERRQ(ierr); 13800298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_24","ICNTL(24): detection of null pivot rows (0 or 1)","None",mumps->id.ICNTL(24),&mumps->id.ICNTL(24),NULL);CHKERRQ(ierr); 13819a2535b5SHong Zhang if (mumps->id.ICNTL(24)) { 13829a2535b5SHong Zhang mumps->id.ICNTL(13) = 1; /* turn-off ScaLAPACK to help with the correct detection of null pivots */ 1383d7ebd59bSHong Zhang } 1384d7ebd59bSHong Zhang 1385b4ed93dbSHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_25","ICNTL(25): computes a solution of a deficient matrix and a null space basis","None",mumps->id.ICNTL(25),&mumps->id.ICNTL(25),NULL);CHKERRQ(ierr); 1386d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_26","ICNTL(26): drives the solution phase if a Schur complement matrix","None",mumps->id.ICNTL(26),&mumps->id.ICNTL(26),NULL);CHKERRQ(ierr); 13872cd7d884SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_27","ICNTL(27): the blocking size for multiple right-hand sides","None",mumps->id.ICNTL(27),&mumps->id.ICNTL(27),NULL);CHKERRQ(ierr); 13880298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_28","ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering","None",mumps->id.ICNTL(28),&mumps->id.ICNTL(28),NULL);CHKERRQ(ierr); 1389d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_29","ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis","None",mumps->id.ICNTL(29),&mumps->id.ICNTL(29),NULL);CHKERRQ(ierr); 139089a9c03aSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_30","ICNTL(30): compute user-specified set of entries in inv(A)","None",mumps->id.ICNTL(30),&mumps->id.ICNTL(30),NULL);CHKERRQ(ierr); */ /* call MatMumpsGetInverse() directly */ 1391d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_31","ICNTL(31): indicates which factors may be discarded during factorization","None",mumps->id.ICNTL(31),&mumps->id.ICNTL(31),NULL);CHKERRQ(ierr); 13924e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_32","ICNTL(32): performs the forward elemination of the right-hand sides during factorization","None",mumps->id.ICNTL(32),&mumps->id.ICNTL(32),NULL);CHKERRQ(ierr); -- not supported by PETSc API */ 13930298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_33","ICNTL(33): compute determinant","None",mumps->id.ICNTL(33),&mumps->id.ICNTL(33),NULL);CHKERRQ(ierr); 1394a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_35","ICNTL(35): activates Block Low Rank (BLR) based factorization","None",mumps->id.ICNTL(35),&mumps->id.ICNTL(35),NULL);CHKERRQ(ierr); 1395a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_36","ICNTL(36): choice of BLR factorization variant","None",mumps->id.ICNTL(36),&mumps->id.ICNTL(36),NULL);CHKERRQ(ierr); 1396a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_38","ICNTL(38): estimated compression rate of LU factors with BLR","None",mumps->id.ICNTL(38),&mumps->id.ICNTL(38),NULL);CHKERRQ(ierr); 1397dcd589f8SShri Abhyankar 13980298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr); 13990298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr); 14000298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr); 14010298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr); 14020298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_5","CNTL(5): fixation for null pivots","None",mumps->id.CNTL(5),&mumps->id.CNTL(5),NULL);CHKERRQ(ierr); 1403b4ed93dbSHong Zhang ierr = PetscOptionsReal("-mat_mumps_cntl_7","CNTL(7): dropping parameter used during BLR","None",mumps->id.CNTL(7),&mumps->id.CNTL(7),NULL);CHKERRQ(ierr); 1404e5bb22a1SHong Zhang 14052a808120SBarry Smith ierr = PetscOptionsString("-mat_mumps_ooc_tmpdir", "out of core directory", "None", mumps->id.ooc_tmpdir, mumps->id.ooc_tmpdir, 256, NULL);CHKERRQ(ierr); 1406b34f08ffSHong Zhang 140716d797efSHong Zhang ierr = PetscOptionsIntArray("-mat_mumps_view_info","request INFO local to each processor","",info,&ninfo,NULL);CHKERRQ(ierr); 1408b34f08ffSHong Zhang if (ninfo) { 1409a0e18203SThibaut Appel if (ninfo > 80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"number of INFO %d must <= 80\n",ninfo); 1410b34f08ffSHong Zhang ierr = PetscMalloc1(ninfo,&mumps->info);CHKERRQ(ierr); 1411b34f08ffSHong Zhang mumps->ninfo = ninfo; 1412b34f08ffSHong Zhang for (i=0; i<ninfo; i++) { 1413a0e18203SThibaut Appel if (info[i] < 0 || info[i]>80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"index of INFO %d must between 1 and 80\n",ninfo); 14142a808120SBarry Smith else mumps->info[i] = info[i]; 1415b34f08ffSHong Zhang } 1416b34f08ffSHong Zhang } 1417b34f08ffSHong Zhang 14182a808120SBarry Smith ierr = PetscOptionsEnd();CHKERRQ(ierr); 1419dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1420dcd589f8SShri Abhyankar } 1421dcd589f8SShri Abhyankar 1422f697e70eSHong Zhang PetscErrorCode PetscInitializeMUMPS(Mat A,Mat_MUMPS *mumps) 1423dcd589f8SShri Abhyankar { 1424dcd589f8SShri Abhyankar PetscErrorCode ierr; 14257c405c4aSJunchao Zhang PetscInt nthreads=0; 1426dcd589f8SShri Abhyankar 1427dcd589f8SShri Abhyankar PetscFunctionBegin; 14283ab56b82SJunchao Zhang mumps->petsc_comm = PetscObjectComm((PetscObject)A); 14293ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->petsc_comm,&mumps->petsc_size);CHKERRQ(ierr); 14303ab56b82SJunchao Zhang ierr = MPI_Comm_rank(mumps->petsc_comm,&mumps->myid);CHKERRQ(ierr); /* so that code like "if (!myid)" still works even if mumps_comm is different */ 14313ab56b82SJunchao Zhang 14327c405c4aSJunchao Zhang ierr = PetscOptionsHasName(NULL,NULL,"-mat_mumps_use_omp_threads",&mumps->use_petsc_omp_support);CHKERRQ(ierr); 14337c405c4aSJunchao Zhang if (mumps->use_petsc_omp_support) nthreads = -1; /* -1 will let PetscOmpCtrlCreate() guess a proper value when user did not supply one */ 14347c405c4aSJunchao Zhang ierr = PetscOptionsGetInt(NULL,NULL,"-mat_mumps_use_omp_threads",&nthreads,NULL);CHKERRQ(ierr); 14353ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { 14363ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 14373ab56b82SJunchao Zhang ierr = PetscOmpCtrlCreate(mumps->petsc_comm,nthreads,&mumps->omp_ctrl);CHKERRQ(ierr); 14383ab56b82SJunchao Zhang ierr = PetscOmpCtrlGetOmpComms(mumps->omp_ctrl,&mumps->omp_comm,&mumps->mumps_comm,&mumps->is_omp_master);CHKERRQ(ierr); 14393ab56b82SJunchao Zhang #else 1440217d3b1eSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP_SYS,"the system does not have PETSc OpenMP support but you added the -mat_mumps_use_omp_threads option. Configure PETSc with --with-openmp --download-hwloc (or --with-hwloc) to enable it, see more in MATSOLVERMUMPS manual\n"); 14413ab56b82SJunchao Zhang #endif 14423ab56b82SJunchao Zhang } else { 14433ab56b82SJunchao Zhang mumps->omp_comm = PETSC_COMM_SELF; 14443ab56b82SJunchao Zhang mumps->mumps_comm = mumps->petsc_comm; 14453ab56b82SJunchao Zhang mumps->is_omp_master = PETSC_TRUE; 14463ab56b82SJunchao Zhang } 14473ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->omp_comm,&mumps->omp_comm_size);CHKERRQ(ierr); 14482205254eSKarl Rupp 14492d4298aeSJunchao Zhang mumps->id.comm_fortran = MPI_Comm_c2f(mumps->mumps_comm); 1450f697e70eSHong Zhang mumps->id.job = JOB_INIT; 1451f697e70eSHong Zhang mumps->id.par = 1; /* host participates factorizaton and solve */ 1452f697e70eSHong Zhang mumps->id.sym = mumps->sym; 14533ab56b82SJunchao Zhang 14543ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 14553ab56b82SJunchao Zhang 14563ab56b82SJunchao Zhang /* copy MUMPS default control values from master to slaves. Although slaves do not call MUMPS, they may access these values in code. 14573ab56b82SJunchao Zhang For example, ICNTL(9) is initialized to 1 by MUMPS and slaves check ICNTL(9) in MatSolve_MUMPS. 14583ab56b82SJunchao Zhang */ 1459a0e18203SThibaut Appel ierr = MPI_Bcast(mumps->id.icntl,60,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 Manual Section 9 */ 14603ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.cntl, 15,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 1461f697e70eSHong Zhang 14620298fd71SBarry Smith mumps->scat_rhs = NULL; 14630298fd71SBarry Smith mumps->scat_sol = NULL; 14649a2535b5SHong Zhang 146570544d5fSHong Zhang /* set PETSc-MUMPS default options - override MUMPS default */ 14669a2535b5SHong Zhang mumps->id.ICNTL(3) = 0; 14679a2535b5SHong Zhang mumps->id.ICNTL(4) = 0; 14682d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 14699a2535b5SHong Zhang mumps->id.ICNTL(18) = 0; /* centralized assembled matrix input */ 14709a2535b5SHong Zhang } else { 14719a2535b5SHong Zhang mumps->id.ICNTL(18) = 3; /* distributed assembled matrix input */ 14724e34a73bSHong Zhang mumps->id.ICNTL(20) = 0; /* rhs is in dense format */ 147370544d5fSHong Zhang mumps->id.ICNTL(21) = 1; /* distributed solution */ 14749a2535b5SHong Zhang } 14756444a565SStefano Zampini 14766444a565SStefano Zampini /* schur */ 14776444a565SStefano Zampini mumps->id.size_schur = 0; 14786444a565SStefano Zampini mumps->id.listvar_schur = NULL; 14796444a565SStefano Zampini mumps->id.schur = NULL; 1480b5fa320bSStefano Zampini mumps->sizeredrhs = 0; 148159ac8732SStefano Zampini mumps->schur_sol = NULL; 148259ac8732SStefano Zampini mumps->schur_sizesol = 0; 1483dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1484dcd589f8SShri Abhyankar } 1485dcd589f8SShri Abhyankar 14869a625307SHong Zhang PetscErrorCode MatFactorSymbolic_MUMPS_ReportIfError(Mat F,Mat A,const MatFactorInfo *info,Mat_MUMPS *mumps) 14875cd7cf9dSHong Zhang { 14885cd7cf9dSHong Zhang PetscErrorCode ierr; 14895cd7cf9dSHong Zhang 14905cd7cf9dSHong Zhang PetscFunctionBegin; 1491a0e18203SThibaut Appel ierr = MPI_Bcast(mumps->id.infog, 80,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 manual p82 */ 14923ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.rinfog,20,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 14935cd7cf9dSHong Zhang if (mumps->id.INFOG(1) < 0) { 14945cd7cf9dSHong Zhang if (A->erroriffailure) { 14955cd7cf9dSHong Zhang SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in analysis phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 14965cd7cf9dSHong Zhang } else { 14975cd7cf9dSHong Zhang if (mumps->id.INFOG(1) == -6) { 14985cd7cf9dSHong Zhang ierr = PetscInfo2(F,"matrix is singular in structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1499603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_STRUCT_ZEROPIVOT; 15005cd7cf9dSHong Zhang } else if (mumps->id.INFOG(1) == -5 || mumps->id.INFOG(1) == -7) { 15015cd7cf9dSHong Zhang ierr = PetscInfo2(F,"problem of workspace, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1502603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 15035cd7cf9dSHong Zhang } else { 15045cd7cf9dSHong Zhang ierr = PetscInfo2(F,"Error reported by MUMPS in analysis phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1505603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 15065cd7cf9dSHong Zhang } 15075cd7cf9dSHong Zhang } 15085cd7cf9dSHong Zhang } 15095cd7cf9dSHong Zhang PetscFunctionReturn(0); 15105cd7cf9dSHong Zhang } 15115cd7cf9dSHong Zhang 1512a5e57a09SHong Zhang /* Note Petsc r(=c) permutation is used when mumps->id.ICNTL(7)==1 with centralized assembled matrix input; otherwise r and c are ignored */ 15130481f469SBarry Smith PetscErrorCode MatLUFactorSymbolic_AIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1514b24902e0SBarry Smith { 1515e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1516dcd589f8SShri Abhyankar PetscErrorCode ierr; 151767877ebaSShri Abhyankar Vec b; 151867877ebaSShri Abhyankar IS is_iden; 151967877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1520397b6df1SKris Buschelman 1521397b6df1SKris Buschelman PetscFunctionBegin; 1522a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1523dcd589f8SShri Abhyankar 15249a2535b5SHong Zhang /* Set MUMPS options from the options database */ 15259a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1526dcd589f8SShri Abhyankar 1527a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 15283ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1529dcd589f8SShri Abhyankar 153067877ebaSShri Abhyankar /* analysis phase */ 153167877ebaSShri Abhyankar /*----------------*/ 1532a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1533a5e57a09SHong Zhang mumps->id.n = M; 1534a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 153567877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1536a5e57a09SHong Zhang if (!mumps->myid) { 1537a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1538a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1539940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 154067877ebaSShri Abhyankar } 1541a5e57a09SHong Zhang if (mumps->id.ICNTL(7) == 1) { /* use user-provide matrix ordering - assuming r = c ordering */ 15425248a706SHong Zhang /* 15435248a706SHong Zhang PetscBool flag; 15445248a706SHong Zhang ierr = ISEqual(r,c,&flag);CHKERRQ(ierr); 15455248a706SHong Zhang if (!flag) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"row_perm != col_perm"); 15465248a706SHong Zhang ierr = ISView(r,PETSC_VIEWER_STDOUT_SELF); 15475248a706SHong Zhang */ 1548a5e57a09SHong Zhang if (!mumps->myid) { 1549e0b74bf9SHong Zhang const PetscInt *idx; 1550e0b74bf9SHong Zhang PetscInt i,*perm_in; 15512205254eSKarl Rupp 1552785e854fSJed Brown ierr = PetscMalloc1(M,&perm_in);CHKERRQ(ierr); 1553e0b74bf9SHong Zhang ierr = ISGetIndices(r,&idx);CHKERRQ(ierr); 15542205254eSKarl Rupp 1555a5e57a09SHong Zhang mumps->id.perm_in = perm_in; 1556e0b74bf9SHong Zhang for (i=0; i<M; i++) perm_in[i] = idx[i]+1; /* perm_in[]: start from 1, not 0! */ 1557e0b74bf9SHong Zhang ierr = ISRestoreIndices(r,&idx);CHKERRQ(ierr); 1558e0b74bf9SHong Zhang } 1559e0b74bf9SHong Zhang } 156067877ebaSShri Abhyankar } 156167877ebaSShri Abhyankar break; 156267877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1563a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1564a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1565a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1566940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 156767877ebaSShri Abhyankar } 156867877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 1569a5e57a09SHong Zhang if (!mumps->myid) { 15702cd7d884SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,A->rmap->N,&mumps->b_seq);CHKERRQ(ierr); 15712cd7d884SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,A->rmap->N,0,1,&is_iden);CHKERRQ(ierr); 157267877ebaSShri Abhyankar } else { 1573a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&mumps->b_seq);CHKERRQ(ierr); 157467877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_iden);CHKERRQ(ierr); 157567877ebaSShri Abhyankar } 15762a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 15779448b7f1SJunchao Zhang ierr = VecScatterCreate(b,is_iden,mumps->b_seq,is_iden,&mumps->scat_rhs);CHKERRQ(ierr); 15786bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 15796bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 158067877ebaSShri Abhyankar break; 158167877ebaSShri Abhyankar } 15823ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 15835cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 158467877ebaSShri Abhyankar 1585719d5645SBarry Smith F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1586dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 158751d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 15884e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 1589eb3ef3b2SHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 1590b24902e0SBarry Smith PetscFunctionReturn(0); 1591b24902e0SBarry Smith } 1592b24902e0SBarry Smith 1593450b117fSShri Abhyankar /* Note the Petsc r and c permutations are ignored */ 1594450b117fSShri Abhyankar PetscErrorCode MatLUFactorSymbolic_BAIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1595450b117fSShri Abhyankar { 1596e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1597dcd589f8SShri Abhyankar PetscErrorCode ierr; 159867877ebaSShri Abhyankar Vec b; 159967877ebaSShri Abhyankar IS is_iden; 160067877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1601450b117fSShri Abhyankar 1602450b117fSShri Abhyankar PetscFunctionBegin; 1603a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1604dcd589f8SShri Abhyankar 16059a2535b5SHong Zhang /* Set MUMPS options from the options database */ 16069a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1607dcd589f8SShri Abhyankar 1608a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 16093ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 161067877ebaSShri Abhyankar 161167877ebaSShri Abhyankar /* analysis phase */ 161267877ebaSShri Abhyankar /*----------------*/ 1613a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1614a5e57a09SHong Zhang mumps->id.n = M; 1615a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 161667877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1617a5e57a09SHong Zhang if (!mumps->myid) { 1618a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1619a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1620940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 162167877ebaSShri Abhyankar } 162267877ebaSShri Abhyankar } 162367877ebaSShri Abhyankar break; 162467877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1625a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1626a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1627a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1628940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 162967877ebaSShri Abhyankar } 163067877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 1631a5e57a09SHong Zhang if (!mumps->myid) { 1632a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,A->cmap->N,&mumps->b_seq);CHKERRQ(ierr); 163367877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,A->cmap->N,0,1,&is_iden);CHKERRQ(ierr); 163467877ebaSShri Abhyankar } else { 1635a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&mumps->b_seq);CHKERRQ(ierr); 163667877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_iden);CHKERRQ(ierr); 163767877ebaSShri Abhyankar } 16382a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 16399448b7f1SJunchao Zhang ierr = VecScatterCreate(b,is_iden,mumps->b_seq,is_iden,&mumps->scat_rhs);CHKERRQ(ierr); 16406bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 16416bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 164267877ebaSShri Abhyankar break; 164367877ebaSShri Abhyankar } 16443ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 16455cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 164667877ebaSShri Abhyankar 1647450b117fSShri Abhyankar F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1648dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 164951d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 1650450b117fSShri Abhyankar PetscFunctionReturn(0); 1651450b117fSShri Abhyankar } 1652b24902e0SBarry Smith 1653141f4205SHong Zhang /* Note the Petsc r permutation and factor info are ignored */ 165467877ebaSShri Abhyankar PetscErrorCode MatCholeskyFactorSymbolic_MUMPS(Mat F,Mat A,IS r,const MatFactorInfo *info) 1655b24902e0SBarry Smith { 1656e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1657dcd589f8SShri Abhyankar PetscErrorCode ierr; 165867877ebaSShri Abhyankar Vec b; 165967877ebaSShri Abhyankar IS is_iden; 166067877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1661397b6df1SKris Buschelman 1662397b6df1SKris Buschelman PetscFunctionBegin; 1663a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1664dcd589f8SShri Abhyankar 16659a2535b5SHong Zhang /* Set MUMPS options from the options database */ 16669a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1667dcd589f8SShri Abhyankar 1668a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 16693ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1670dcd589f8SShri Abhyankar 167167877ebaSShri Abhyankar /* analysis phase */ 167267877ebaSShri Abhyankar /*----------------*/ 1673a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1674a5e57a09SHong Zhang mumps->id.n = M; 1675a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 167667877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1677a5e57a09SHong Zhang if (!mumps->myid) { 1678a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1679a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1680940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 168167877ebaSShri Abhyankar } 168267877ebaSShri Abhyankar } 168367877ebaSShri Abhyankar break; 168467877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1685a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1686a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1687a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1688940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 168967877ebaSShri Abhyankar } 169067877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 1691a5e57a09SHong Zhang if (!mumps->myid) { 1692a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,A->cmap->N,&mumps->b_seq);CHKERRQ(ierr); 169367877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,A->cmap->N,0,1,&is_iden);CHKERRQ(ierr); 169467877ebaSShri Abhyankar } else { 1695a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&mumps->b_seq);CHKERRQ(ierr); 169667877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_iden);CHKERRQ(ierr); 169767877ebaSShri Abhyankar } 16982a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 16999448b7f1SJunchao Zhang ierr = VecScatterCreate(b,is_iden,mumps->b_seq,is_iden,&mumps->scat_rhs);CHKERRQ(ierr); 17006bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 17016bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 170267877ebaSShri Abhyankar break; 170367877ebaSShri Abhyankar } 17043ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 17055cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 17065cd7cf9dSHong Zhang 17072792810eSHong Zhang F->ops->choleskyfactornumeric = MatFactorNumeric_MUMPS; 1708dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 170951d5961aSHong Zhang F->ops->solvetranspose = MatSolve_MUMPS; 17104e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 171123a5080aSHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 17124e34a73bSHong Zhang #if defined(PETSC_USE_COMPLEX) 17130298fd71SBarry Smith F->ops->getinertia = NULL; 17144e34a73bSHong Zhang #else 17154e34a73bSHong Zhang F->ops->getinertia = MatGetInertia_SBAIJMUMPS; 1716db4efbfdSBarry Smith #endif 1717b24902e0SBarry Smith PetscFunctionReturn(0); 1718b24902e0SBarry Smith } 1719b24902e0SBarry Smith 172064e6c443SBarry Smith PetscErrorCode MatView_MUMPS(Mat A,PetscViewer viewer) 172174ed9c26SBarry Smith { 1722f6c57405SHong Zhang PetscErrorCode ierr; 172364e6c443SBarry Smith PetscBool iascii; 172464e6c443SBarry Smith PetscViewerFormat format; 1725e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 1726f6c57405SHong Zhang 1727f6c57405SHong Zhang PetscFunctionBegin; 172864e6c443SBarry Smith /* check if matrix is mumps type */ 172964e6c443SBarry Smith if (A->ops->solve != MatSolve_MUMPS) PetscFunctionReturn(0); 173064e6c443SBarry Smith 1731251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 173264e6c443SBarry Smith if (iascii) { 173364e6c443SBarry Smith ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 173464e6c443SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO) { 173564e6c443SBarry Smith ierr = PetscViewerASCIIPrintf(viewer,"MUMPS run parameters:\n");CHKERRQ(ierr); 1736a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," SYM (matrix type): %d \n",mumps->id.sym);CHKERRQ(ierr); 1737a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," PAR (host participation): %d \n",mumps->id.par);CHKERRQ(ierr); 1738a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(1) (output for error): %d \n",mumps->id.ICNTL(1));CHKERRQ(ierr); 1739a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(2) (output of diagnostic msg): %d \n",mumps->id.ICNTL(2));CHKERRQ(ierr); 1740a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(3) (output for global info): %d \n",mumps->id.ICNTL(3));CHKERRQ(ierr); 1741a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(4) (level of printing): %d \n",mumps->id.ICNTL(4));CHKERRQ(ierr); 1742a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(5) (input mat struct): %d \n",mumps->id.ICNTL(5));CHKERRQ(ierr); 1743a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(6) (matrix prescaling): %d \n",mumps->id.ICNTL(6));CHKERRQ(ierr); 1744d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(7) (sequential matrix ordering):%d \n",mumps->id.ICNTL(7));CHKERRQ(ierr); 1745d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(8) (scaling strategy): %d \n",mumps->id.ICNTL(8));CHKERRQ(ierr); 1746a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(10) (max num of refinements): %d \n",mumps->id.ICNTL(10));CHKERRQ(ierr); 1747a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(11) (error analysis): %d \n",mumps->id.ICNTL(11));CHKERRQ(ierr); 1748a5e57a09SHong Zhang if (mumps->id.ICNTL(11)>0) { 1749a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(4) (inf norm of input mat): %g\n",mumps->id.RINFOG(4));CHKERRQ(ierr); 1750a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(5) (inf norm of solution): %g\n",mumps->id.RINFOG(5));CHKERRQ(ierr); 1751a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(6) (inf norm of residual): %g\n",mumps->id.RINFOG(6));CHKERRQ(ierr); 1752a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(7),RINFOG(8) (backward error est): %g, %g\n",mumps->id.RINFOG(7),mumps->id.RINFOG(8));CHKERRQ(ierr); 1753a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(9) (error estimate): %g \n",mumps->id.RINFOG(9));CHKERRQ(ierr); 1754a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(10),RINFOG(11)(condition numbers): %g, %g\n",mumps->id.RINFOG(10),mumps->id.RINFOG(11));CHKERRQ(ierr); 1755f6c57405SHong Zhang } 1756a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(12) (efficiency control): %d \n",mumps->id.ICNTL(12));CHKERRQ(ierr); 1757a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(13) (efficiency control): %d \n",mumps->id.ICNTL(13));CHKERRQ(ierr); 1758a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(14) (percentage of estimated workspace increase): %d \n",mumps->id.ICNTL(14));CHKERRQ(ierr); 1759f6c57405SHong Zhang /* ICNTL(15-17) not used */ 1760a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(18) (input mat struct): %d \n",mumps->id.ICNTL(18));CHKERRQ(ierr); 1761d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(19) (Schur complement info): %d \n",mumps->id.ICNTL(19));CHKERRQ(ierr); 1762a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(20) (rhs sparse pattern): %d \n",mumps->id.ICNTL(20));CHKERRQ(ierr); 1763ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," ICNTL(21) (solution struct): %d \n",mumps->id.ICNTL(21));CHKERRQ(ierr); 1764a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(22) (in-core/out-of-core facility): %d \n",mumps->id.ICNTL(22));CHKERRQ(ierr); 1765a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(23) (max size of memory can be allocated locally):%d \n",mumps->id.ICNTL(23));CHKERRQ(ierr); 1766c0165424SHong Zhang 1767a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(24) (detection of null pivot rows): %d \n",mumps->id.ICNTL(24));CHKERRQ(ierr); 1768a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(25) (computation of a null space basis): %d \n",mumps->id.ICNTL(25));CHKERRQ(ierr); 1769a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(26) (Schur options for rhs or solution): %d \n",mumps->id.ICNTL(26));CHKERRQ(ierr); 1770a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(27) (experimental parameter): %d \n",mumps->id.ICNTL(27));CHKERRQ(ierr); 1771a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(28) (use parallel or sequential ordering): %d \n",mumps->id.ICNTL(28));CHKERRQ(ierr); 1772a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(29) (parallel ordering): %d \n",mumps->id.ICNTL(29));CHKERRQ(ierr); 177342179a6aSHong Zhang 1774a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(30) (user-specified set of entries in inv(A)): %d \n",mumps->id.ICNTL(30));CHKERRQ(ierr); 1775a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(31) (factors is discarded in the solve phase): %d \n",mumps->id.ICNTL(31));CHKERRQ(ierr); 1776a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(33) (compute determinant): %d \n",mumps->id.ICNTL(33));CHKERRQ(ierr); 17776e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(35) (activate BLR based factorization): %d \n",mumps->id.ICNTL(35));CHKERRQ(ierr); 1778a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(36) (choice of BLR factorization variant): %d \n",mumps->id.ICNTL(36));CHKERRQ(ierr); 1779a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(38) (estimated compression rate of LU factors): %d \n",mumps->id.ICNTL(38));CHKERRQ(ierr); 1780f6c57405SHong Zhang 1781a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(1) (relative pivoting threshold): %g \n",mumps->id.CNTL(1));CHKERRQ(ierr); 1782a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(2) (stopping criterion of refinement): %g \n",mumps->id.CNTL(2));CHKERRQ(ierr); 1783ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(3) (absolute pivoting threshold): %g \n",mumps->id.CNTL(3));CHKERRQ(ierr); 1784ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(4) (value of static pivoting): %g \n",mumps->id.CNTL(4));CHKERRQ(ierr); 1785a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(5) (fixation for null pivots): %g \n",mumps->id.CNTL(5));CHKERRQ(ierr); 17866e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(7) (dropping parameter for BLR): %g \n",mumps->id.CNTL(7));CHKERRQ(ierr); 1787f6c57405SHong Zhang 1788f6c57405SHong Zhang /* infomation local to each processor */ 178934ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(1) (local estimated flops for the elimination after analysis): \n");CHKERRQ(ierr); 17901575c14dSBarry Smith ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr); 1791a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(1));CHKERRQ(ierr); 17922a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 179334ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(2) (local estimated flops for the assembly after factorization): \n");CHKERRQ(ierr); 1794a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(2));CHKERRQ(ierr); 17952a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 179634ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(3) (local estimated flops for the elimination after factorization): \n");CHKERRQ(ierr); 1797a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(3));CHKERRQ(ierr); 17982a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1799f6c57405SHong Zhang 180034ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(15) (estimated size of (in MB) MUMPS internal data for running numerical factorization): \n");CHKERRQ(ierr); 1801a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(15));CHKERRQ(ierr); 18022a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1803f6c57405SHong Zhang 180434ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(16) (size of (in MB) MUMPS internal data used during numerical factorization): \n");CHKERRQ(ierr); 1805a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(16));CHKERRQ(ierr); 18062a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1807f6c57405SHong Zhang 180834ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(23) (num of pivots eliminated on this processor after factorization): \n");CHKERRQ(ierr); 1809a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(23));CHKERRQ(ierr); 18102a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1811b34f08ffSHong Zhang 1812a0e18203SThibaut Appel if (mumps->ninfo && mumps->ninfo <= 80){ 1813b34f08ffSHong Zhang PetscInt i; 1814b34f08ffSHong Zhang for (i=0; i<mumps->ninfo; i++){ 1815b34f08ffSHong Zhang ierr = PetscViewerASCIIPrintf(viewer, " INFO(%d): \n",mumps->info[i]);CHKERRQ(ierr); 1816b34f08ffSHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(mumps->info[i]));CHKERRQ(ierr); 18172a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1818b34f08ffSHong Zhang } 1819b34f08ffSHong Zhang } 18201575c14dSBarry Smith ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr); 1821f6c57405SHong Zhang 1822a5e57a09SHong Zhang if (!mumps->myid) { /* information from the host */ 1823a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(1) (global estimated flops for the elimination after analysis): %g \n",mumps->id.RINFOG(1));CHKERRQ(ierr); 1824a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(2) (global estimated flops for the assembly after factorization): %g \n",mumps->id.RINFOG(2));CHKERRQ(ierr); 1825a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(3) (global estimated flops for the elimination after factorization): %g \n",mumps->id.RINFOG(3));CHKERRQ(ierr); 1826a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," (RINFOG(12) RINFOG(13))*2^INFOG(34) (determinant): (%g,%g)*(2^%d)\n",mumps->id.RINFOG(12),mumps->id.RINFOG(13),mumps->id.INFOG(34));CHKERRQ(ierr); 1827f6c57405SHong Zhang 1828a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(3) (estimated real workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(3));CHKERRQ(ierr); 1829a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(4) (estimated integer workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(4));CHKERRQ(ierr); 1830a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(5) (estimated maximum front size in the complete tree): %d \n",mumps->id.INFOG(5));CHKERRQ(ierr); 1831a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(6) (number of nodes in the complete tree): %d \n",mumps->id.INFOG(6));CHKERRQ(ierr); 1832a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(7) (ordering option effectively use after analysis): %d \n",mumps->id.INFOG(7));CHKERRQ(ierr); 1833a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(8) (structural symmetry in percent of the permuted matrix after analysis): %d \n",mumps->id.INFOG(8));CHKERRQ(ierr); 1834a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(9) (total real/complex workspace to store the matrix factors after factorization): %d \n",mumps->id.INFOG(9));CHKERRQ(ierr); 1835a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(10) (total integer space store the matrix factors after factorization): %d \n",mumps->id.INFOG(10));CHKERRQ(ierr); 1836a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(11) (order of largest frontal matrix after factorization): %d \n",mumps->id.INFOG(11));CHKERRQ(ierr); 1837a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(12) (number of off-diagonal pivots): %d \n",mumps->id.INFOG(12));CHKERRQ(ierr); 1838a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(13) (number of delayed pivots after factorization): %d \n",mumps->id.INFOG(13));CHKERRQ(ierr); 1839a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(14) (number of memory compress after factorization): %d \n",mumps->id.INFOG(14));CHKERRQ(ierr); 1840a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(15) (number of steps of iterative refinement after solution): %d \n",mumps->id.INFOG(15));CHKERRQ(ierr); 1841a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(16) (estimated size (in MB) of all MUMPS internal data for factorization after analysis: value on the most memory consuming processor): %d \n",mumps->id.INFOG(16));CHKERRQ(ierr); 1842a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(17) (estimated size of all MUMPS internal data for factorization after analysis: sum over all processors): %d \n",mumps->id.INFOG(17));CHKERRQ(ierr); 1843a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(18) (size of all MUMPS internal data allocated during factorization: value on the most memory consuming processor): %d \n",mumps->id.INFOG(18));CHKERRQ(ierr); 1844a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(19) (size of all MUMPS internal data allocated during factorization: sum over all processors): %d \n",mumps->id.INFOG(19));CHKERRQ(ierr); 1845a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(20) (estimated number of entries in the factors): %d \n",mumps->id.INFOG(20));CHKERRQ(ierr); 1846a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(21) (size in MB of memory effectively used during factorization - value on the most memory consuming processor): %d \n",mumps->id.INFOG(21));CHKERRQ(ierr); 1847a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(22) (size in MB of memory effectively used during factorization - sum over all processors): %d \n",mumps->id.INFOG(22));CHKERRQ(ierr); 1848a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(23) (after analysis: value of ICNTL(6) effectively used): %d \n",mumps->id.INFOG(23));CHKERRQ(ierr); 1849a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(24) (after analysis: value of ICNTL(12) effectively used): %d \n",mumps->id.INFOG(24));CHKERRQ(ierr); 1850a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(25) (after factorization: number of pivots modified by static pivoting): %d \n",mumps->id.INFOG(25));CHKERRQ(ierr); 185140d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(28) (after factorization: number of null pivots encountered): %d\n",mumps->id.INFOG(28));CHKERRQ(ierr); 185240d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(29) (after factorization: effective number of entries in the factors (sum over all processors)): %d\n",mumps->id.INFOG(29));CHKERRQ(ierr); 185340d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(30, 31) (after solution: size in Mbytes of memory used during solution phase): %d, %d\n",mumps->id.INFOG(30),mumps->id.INFOG(31));CHKERRQ(ierr); 185440d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(32) (after analysis: type of analysis done): %d\n",mumps->id.INFOG(32));CHKERRQ(ierr); 185540d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(33) (value used for ICNTL(8)): %d\n",mumps->id.INFOG(33));CHKERRQ(ierr); 185640d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(34) (exponent of the determinant if determinant is requested): %d\n",mumps->id.INFOG(34));CHKERRQ(ierr); 1857a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(35) (after factorization: number of entries taking into account BLR factor compression - sum over all processors): %d\n",mumps->id.INFOG(35));CHKERRQ(ierr); 1858a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(36) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(36));CHKERRQ(ierr); 1859a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(37) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - sum over all processors): %d \n",mumps->id.INFOG(37));CHKERRQ(ierr); 1860a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(38) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(38));CHKERRQ(ierr); 1861a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(39) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - sum over all processors): %d \n",mumps->id.INFOG(39));CHKERRQ(ierr); 1862f6c57405SHong Zhang } 1863f6c57405SHong Zhang } 1864cb828f0fSHong Zhang } 1865f6c57405SHong Zhang PetscFunctionReturn(0); 1866f6c57405SHong Zhang } 1867f6c57405SHong Zhang 186835bd34faSBarry Smith PetscErrorCode MatGetInfo_MUMPS(Mat A,MatInfoType flag,MatInfo *info) 186935bd34faSBarry Smith { 1870e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)A->data; 187135bd34faSBarry Smith 187235bd34faSBarry Smith PetscFunctionBegin; 187335bd34faSBarry Smith info->block_size = 1.0; 1874cb828f0fSHong Zhang info->nz_allocated = mumps->id.INFOG(20); 1875cb828f0fSHong Zhang info->nz_used = mumps->id.INFOG(20); 187635bd34faSBarry Smith info->nz_unneeded = 0.0; 187735bd34faSBarry Smith info->assemblies = 0.0; 187835bd34faSBarry Smith info->mallocs = 0.0; 187935bd34faSBarry Smith info->memory = 0.0; 188035bd34faSBarry Smith info->fill_ratio_given = 0; 188135bd34faSBarry Smith info->fill_ratio_needed = 0; 188235bd34faSBarry Smith info->factor_mallocs = 0; 188335bd34faSBarry Smith PetscFunctionReturn(0); 188435bd34faSBarry Smith } 188535bd34faSBarry Smith 18865ccb76cbSHong Zhang /* -------------------------------------------------------------------------------------------*/ 18878e7ba810SStefano Zampini PetscErrorCode MatFactorSetSchurIS_MUMPS(Mat F, IS is) 18886444a565SStefano Zampini { 1889e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 18908e7ba810SStefano Zampini const PetscInt *idxs; 18918e7ba810SStefano Zampini PetscInt size,i; 18926444a565SStefano Zampini PetscErrorCode ierr; 18936444a565SStefano Zampini 18946444a565SStefano Zampini PetscFunctionBegin; 1895b3cb21ddSStefano Zampini ierr = ISGetLocalSize(is,&size);CHKERRQ(ierr); 18962d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 18973ab56b82SJunchao Zhang PetscBool ls,gs; /* gs is false if any rank other than root has non-empty IS */ 1898241dbb5eSStefano Zampini 18993ab56b82SJunchao Zhang ls = mumps->myid ? (size ? PETSC_FALSE : PETSC_TRUE) : PETSC_TRUE; /* always true on root; false on others if their size != 0 */ 19003ab56b82SJunchao Zhang ierr = MPI_Allreduce(&ls,&gs,1,MPIU_BOOL,MPI_LAND,mumps->petsc_comm);CHKERRQ(ierr); 1901241dbb5eSStefano Zampini if (!gs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MUMPS distributed parallel Schur complements not yet supported from PETSc\n"); 1902241dbb5eSStefano Zampini } 19036444a565SStefano Zampini if (mumps->id.size_schur != size) { 19046444a565SStefano Zampini ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr); 19056444a565SStefano Zampini mumps->id.size_schur = size; 19066444a565SStefano Zampini mumps->id.schur_lld = size; 19076444a565SStefano Zampini ierr = PetscMalloc2(size,&mumps->id.listvar_schur,size*size,&mumps->id.schur);CHKERRQ(ierr); 19086444a565SStefano Zampini } 1909b3cb21ddSStefano Zampini 1910b3cb21ddSStefano Zampini /* Schur complement matrix */ 1911b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.size_schur,(PetscScalar*)mumps->id.schur,&F->schur);CHKERRQ(ierr); 1912b3cb21ddSStefano Zampini if (mumps->sym == 1) { 1913b3cb21ddSStefano Zampini ierr = MatSetOption(F->schur,MAT_SPD,PETSC_TRUE);CHKERRQ(ierr); 1914b3cb21ddSStefano Zampini } 1915b3cb21ddSStefano Zampini 1916b3cb21ddSStefano Zampini /* MUMPS expects Fortran style indices */ 19178e7ba810SStefano Zampini ierr = ISGetIndices(is,&idxs);CHKERRQ(ierr); 1918580bdb30SBarry Smith ierr = PetscArraycpy(mumps->id.listvar_schur,idxs,size);CHKERRQ(ierr); 19198e7ba810SStefano Zampini for (i=0;i<size;i++) mumps->id.listvar_schur[i]++; 19208e7ba810SStefano Zampini ierr = ISRestoreIndices(is,&idxs);CHKERRQ(ierr); 19212d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 1922241dbb5eSStefano Zampini mumps->id.ICNTL(19) = 1; /* MUMPS returns Schur centralized on the host */ 1923241dbb5eSStefano Zampini } else { 19246444a565SStefano Zampini if (F->factortype == MAT_FACTOR_LU) { 192559ac8732SStefano Zampini mumps->id.ICNTL(19) = 3; /* MUMPS returns full matrix */ 19266444a565SStefano Zampini } else { 192759ac8732SStefano Zampini mumps->id.ICNTL(19) = 2; /* MUMPS returns lower triangular part */ 19286444a565SStefano Zampini } 1929241dbb5eSStefano Zampini } 193059ac8732SStefano Zampini /* set a special value of ICNTL (not handled my MUMPS) to be used in the solve phase by PETSc */ 1931b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 19326444a565SStefano Zampini PetscFunctionReturn(0); 19336444a565SStefano Zampini } 193459ac8732SStefano Zampini 19356444a565SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 19365a05ddb0SStefano Zampini PetscErrorCode MatFactorCreateSchurComplement_MUMPS(Mat F,Mat* S) 19376444a565SStefano Zampini { 19386444a565SStefano Zampini Mat St; 1939e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 19406444a565SStefano Zampini PetscScalar *array; 19416444a565SStefano Zampini #if defined(PETSC_USE_COMPLEX) 19428ac429a0SStefano Zampini PetscScalar im = PetscSqrtScalar((PetscScalar)-1.0); 19436444a565SStefano Zampini #endif 19446444a565SStefano Zampini PetscErrorCode ierr; 19456444a565SStefano Zampini 19466444a565SStefano Zampini PetscFunctionBegin; 19475a05ddb0SStefano Zampini if (!mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it"); 1948241dbb5eSStefano Zampini ierr = MatCreate(PETSC_COMM_SELF,&St);CHKERRQ(ierr); 19496444a565SStefano Zampini ierr = MatSetSizes(St,PETSC_DECIDE,PETSC_DECIDE,mumps->id.size_schur,mumps->id.size_schur);CHKERRQ(ierr); 19506444a565SStefano Zampini ierr = MatSetType(St,MATDENSE);CHKERRQ(ierr); 19516444a565SStefano Zampini ierr = MatSetUp(St);CHKERRQ(ierr); 19526444a565SStefano Zampini ierr = MatDenseGetArray(St,&array);CHKERRQ(ierr); 195359ac8732SStefano Zampini if (!mumps->sym) { /* MUMPS always return a full matrix */ 19546444a565SStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 19556444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19566444a565SStefano Zampini for (i=0;i<N;i++) { 19576444a565SStefano Zampini for (j=0;j<N;j++) { 19586444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19596444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19606444a565SStefano Zampini #else 19616444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19626444a565SStefano Zampini #endif 19636444a565SStefano Zampini array[j*N+i] = val; 19646444a565SStefano Zampini } 19656444a565SStefano Zampini } 19666444a565SStefano Zampini } else { /* stored by columns */ 1967580bdb30SBarry Smith ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr); 19686444a565SStefano Zampini } 19696444a565SStefano Zampini } else { /* either full or lower-triangular (not packed) */ 19706444a565SStefano Zampini if (mumps->id.ICNTL(19) == 2) { /* lower triangular stored by columns */ 19716444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19726444a565SStefano Zampini for (i=0;i<N;i++) { 19736444a565SStefano Zampini for (j=i;j<N;j++) { 19746444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19756444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19766444a565SStefano Zampini #else 19776444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19786444a565SStefano Zampini #endif 19796444a565SStefano Zampini array[i*N+j] = val; 19806444a565SStefano Zampini array[j*N+i] = val; 19816444a565SStefano Zampini } 19826444a565SStefano Zampini } 19836444a565SStefano Zampini } else if (mumps->id.ICNTL(19) == 3) { /* full matrix */ 1984580bdb30SBarry Smith ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr); 19856444a565SStefano Zampini } else { /* ICNTL(19) == 1 lower triangular stored by rows */ 19866444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19876444a565SStefano Zampini for (i=0;i<N;i++) { 19886444a565SStefano Zampini for (j=0;j<i+1;j++) { 19896444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19906444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19916444a565SStefano Zampini #else 19926444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19936444a565SStefano Zampini #endif 19946444a565SStefano Zampini array[i*N+j] = val; 19956444a565SStefano Zampini array[j*N+i] = val; 19966444a565SStefano Zampini } 19976444a565SStefano Zampini } 19986444a565SStefano Zampini } 19996444a565SStefano Zampini } 20006444a565SStefano Zampini ierr = MatDenseRestoreArray(St,&array);CHKERRQ(ierr); 20016444a565SStefano Zampini *S = St; 20026444a565SStefano Zampini PetscFunctionReturn(0); 20036444a565SStefano Zampini } 20046444a565SStefano Zampini 200559ac8732SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 20065ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt ival) 20075ccb76cbSHong Zhang { 2008e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 20095ccb76cbSHong Zhang 20105ccb76cbSHong Zhang PetscFunctionBegin; 2011a5e57a09SHong Zhang mumps->id.ICNTL(icntl) = ival; 20125ccb76cbSHong Zhang PetscFunctionReturn(0); 20135ccb76cbSHong Zhang } 20145ccb76cbSHong Zhang 2015bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt *ival) 2016bc6112feSHong Zhang { 2017e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2018bc6112feSHong Zhang 2019bc6112feSHong Zhang PetscFunctionBegin; 2020bc6112feSHong Zhang *ival = mumps->id.ICNTL(icntl); 2021bc6112feSHong Zhang PetscFunctionReturn(0); 2022bc6112feSHong Zhang } 2023bc6112feSHong Zhang 20245ccb76cbSHong Zhang /*@ 20255ccb76cbSHong Zhang MatMumpsSetIcntl - Set MUMPS parameter ICNTL() 20265ccb76cbSHong Zhang 20275ccb76cbSHong Zhang Logically Collective on Mat 20285ccb76cbSHong Zhang 20295ccb76cbSHong Zhang Input Parameters: 20305ccb76cbSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 20315ccb76cbSHong Zhang . icntl - index of MUMPS parameter array ICNTL() 20325ccb76cbSHong Zhang - ival - value of MUMPS ICNTL(icntl) 20335ccb76cbSHong Zhang 20345ccb76cbSHong Zhang Options Database: 20355ccb76cbSHong Zhang . -mat_mumps_icntl_<icntl> <ival> 20365ccb76cbSHong Zhang 20375ccb76cbSHong Zhang Level: beginner 20385ccb76cbSHong Zhang 203996a0c994SBarry Smith References: 204096a0c994SBarry Smith . MUMPS Users' Guide 20415ccb76cbSHong Zhang 20429fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 20435ccb76cbSHong Zhang @*/ 20445ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl(Mat F,PetscInt icntl,PetscInt ival) 20455ccb76cbSHong Zhang { 20465ccb76cbSHong Zhang PetscErrorCode ierr; 20475ccb76cbSHong Zhang 20485ccb76cbSHong Zhang PetscFunctionBegin; 20492989dfd4SHong Zhang PetscValidType(F,1); 20502989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 20515ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 20525ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,ival,3); 20535ccb76cbSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetIcntl_C",(Mat,PetscInt,PetscInt),(F,icntl,ival));CHKERRQ(ierr); 20545ccb76cbSHong Zhang PetscFunctionReturn(0); 20555ccb76cbSHong Zhang } 20565ccb76cbSHong Zhang 2057a21f80fcSHong Zhang /*@ 2058a21f80fcSHong Zhang MatMumpsGetIcntl - Get MUMPS parameter ICNTL() 2059a21f80fcSHong Zhang 2060a21f80fcSHong Zhang Logically Collective on Mat 2061a21f80fcSHong Zhang 2062a21f80fcSHong Zhang Input Parameters: 2063a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2064a21f80fcSHong Zhang - icntl - index of MUMPS parameter array ICNTL() 2065a21f80fcSHong Zhang 2066a21f80fcSHong Zhang Output Parameter: 2067a21f80fcSHong Zhang . ival - value of MUMPS ICNTL(icntl) 2068a21f80fcSHong Zhang 2069a21f80fcSHong Zhang Level: beginner 2070a21f80fcSHong Zhang 207196a0c994SBarry Smith References: 207296a0c994SBarry Smith . MUMPS Users' Guide 2073a21f80fcSHong Zhang 20749fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2075a21f80fcSHong Zhang @*/ 2076bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl(Mat F,PetscInt icntl,PetscInt *ival) 2077bc6112feSHong Zhang { 2078bc6112feSHong Zhang PetscErrorCode ierr; 2079bc6112feSHong Zhang 2080bc6112feSHong Zhang PetscFunctionBegin; 20812989dfd4SHong Zhang PetscValidType(F,1); 20822989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2083bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2084bc6112feSHong Zhang PetscValidIntPointer(ival,3); 20852989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetIcntl_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2086bc6112feSHong Zhang PetscFunctionReturn(0); 2087bc6112feSHong Zhang } 2088bc6112feSHong Zhang 20898928b65cSHong Zhang /* -------------------------------------------------------------------------------------------*/ 20908928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal val) 20918928b65cSHong Zhang { 2092e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 20938928b65cSHong Zhang 20948928b65cSHong Zhang PetscFunctionBegin; 20958928b65cSHong Zhang mumps->id.CNTL(icntl) = val; 20968928b65cSHong Zhang PetscFunctionReturn(0); 20978928b65cSHong Zhang } 20988928b65cSHong Zhang 2099bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal *val) 2100bc6112feSHong Zhang { 2101e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2102bc6112feSHong Zhang 2103bc6112feSHong Zhang PetscFunctionBegin; 2104bc6112feSHong Zhang *val = mumps->id.CNTL(icntl); 2105bc6112feSHong Zhang PetscFunctionReturn(0); 2106bc6112feSHong Zhang } 2107bc6112feSHong Zhang 21088928b65cSHong Zhang /*@ 21098928b65cSHong Zhang MatMumpsSetCntl - Set MUMPS parameter CNTL() 21108928b65cSHong Zhang 21118928b65cSHong Zhang Logically Collective on Mat 21128928b65cSHong Zhang 21138928b65cSHong Zhang Input Parameters: 21148928b65cSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 21158928b65cSHong Zhang . icntl - index of MUMPS parameter array CNTL() 21168928b65cSHong Zhang - val - value of MUMPS CNTL(icntl) 21178928b65cSHong Zhang 21188928b65cSHong Zhang Options Database: 21198928b65cSHong Zhang . -mat_mumps_cntl_<icntl> <val> 21208928b65cSHong Zhang 21218928b65cSHong Zhang Level: beginner 21228928b65cSHong Zhang 212396a0c994SBarry Smith References: 212496a0c994SBarry Smith . MUMPS Users' Guide 21258928b65cSHong Zhang 21269fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 21278928b65cSHong Zhang @*/ 21288928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl(Mat F,PetscInt icntl,PetscReal val) 21298928b65cSHong Zhang { 21308928b65cSHong Zhang PetscErrorCode ierr; 21318928b65cSHong Zhang 21328928b65cSHong Zhang PetscFunctionBegin; 21332989dfd4SHong Zhang PetscValidType(F,1); 21342989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 21358928b65cSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2136bc6112feSHong Zhang PetscValidLogicalCollectiveReal(F,val,3); 21378928b65cSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetCntl_C",(Mat,PetscInt,PetscReal),(F,icntl,val));CHKERRQ(ierr); 21388928b65cSHong Zhang PetscFunctionReturn(0); 21398928b65cSHong Zhang } 21408928b65cSHong Zhang 2141a21f80fcSHong Zhang /*@ 2142a21f80fcSHong Zhang MatMumpsGetCntl - Get MUMPS parameter CNTL() 2143a21f80fcSHong Zhang 2144a21f80fcSHong Zhang Logically Collective on Mat 2145a21f80fcSHong Zhang 2146a21f80fcSHong Zhang Input Parameters: 2147a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2148a21f80fcSHong Zhang - icntl - index of MUMPS parameter array CNTL() 2149a21f80fcSHong Zhang 2150a21f80fcSHong Zhang Output Parameter: 2151a21f80fcSHong Zhang . val - value of MUMPS CNTL(icntl) 2152a21f80fcSHong Zhang 2153a21f80fcSHong Zhang Level: beginner 2154a21f80fcSHong Zhang 215596a0c994SBarry Smith References: 215696a0c994SBarry Smith . MUMPS Users' Guide 2157a21f80fcSHong Zhang 21589fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2159a21f80fcSHong Zhang @*/ 2160bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl(Mat F,PetscInt icntl,PetscReal *val) 2161bc6112feSHong Zhang { 2162bc6112feSHong Zhang PetscErrorCode ierr; 2163bc6112feSHong Zhang 2164bc6112feSHong Zhang PetscFunctionBegin; 21652989dfd4SHong Zhang PetscValidType(F,1); 21662989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2167bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2168bc6112feSHong Zhang PetscValidRealPointer(val,3); 21692989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetCntl_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2170bc6112feSHong Zhang PetscFunctionReturn(0); 2171bc6112feSHong Zhang } 2172bc6112feSHong Zhang 2173ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo_MUMPS(Mat F,PetscInt icntl,PetscInt *info) 2174bc6112feSHong Zhang { 2175e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2176bc6112feSHong Zhang 2177bc6112feSHong Zhang PetscFunctionBegin; 2178bc6112feSHong Zhang *info = mumps->id.INFO(icntl); 2179bc6112feSHong Zhang PetscFunctionReturn(0); 2180bc6112feSHong Zhang } 2181bc6112feSHong Zhang 2182ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog_MUMPS(Mat F,PetscInt icntl,PetscInt *infog) 2183bc6112feSHong Zhang { 2184e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2185bc6112feSHong Zhang 2186bc6112feSHong Zhang PetscFunctionBegin; 2187bc6112feSHong Zhang *infog = mumps->id.INFOG(icntl); 2188bc6112feSHong Zhang PetscFunctionReturn(0); 2189bc6112feSHong Zhang } 2190bc6112feSHong Zhang 2191ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfo) 2192bc6112feSHong Zhang { 2193e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2194bc6112feSHong Zhang 2195bc6112feSHong Zhang PetscFunctionBegin; 2196bc6112feSHong Zhang *rinfo = mumps->id.RINFO(icntl); 2197bc6112feSHong Zhang PetscFunctionReturn(0); 2198bc6112feSHong Zhang } 2199bc6112feSHong Zhang 2200ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfog) 2201bc6112feSHong Zhang { 2202e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2203bc6112feSHong Zhang 2204bc6112feSHong Zhang PetscFunctionBegin; 2205bc6112feSHong Zhang *rinfog = mumps->id.RINFOG(icntl); 2206bc6112feSHong Zhang PetscFunctionReturn(0); 2207bc6112feSHong Zhang } 2208bc6112feSHong Zhang 220989a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse_MUMPS(Mat F,Mat spRHS) 2210bb599dfdSHong Zhang { 2211bb599dfdSHong Zhang PetscErrorCode ierr; 22120e6b8875SHong Zhang Mat Bt = NULL,Btseq = NULL; 22130e6b8875SHong Zhang PetscBool flg; 2214bb599dfdSHong Zhang Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2215bb599dfdSHong Zhang PetscScalar *aa; 2216bb599dfdSHong Zhang PetscInt spnr,*ia,*ja; 2217bb599dfdSHong Zhang 2218bb599dfdSHong Zhang PetscFunctionBegin; 2219e3f2db6aSHong Zhang PetscValidIntPointer(spRHS,2); 22200e6b8875SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)spRHS,MATTRANSPOSEMAT,&flg);CHKERRQ(ierr); 22210e6b8875SHong Zhang if (flg) { 2222bb599dfdSHong Zhang ierr = MatTransposeGetMat(spRHS,&Bt);CHKERRQ(ierr); 22230e6b8875SHong Zhang } else SETERRQ(PetscObjectComm((PetscObject)spRHS),PETSC_ERR_ARG_WRONG,"Matrix spRHS must be type MATTRANSPOSEMAT matrix"); 2224bb599dfdSHong Zhang 2225bb599dfdSHong Zhang ierr = MatMumpsSetIcntl(F,30,1);CHKERRQ(ierr); 2226bb599dfdSHong Zhang 22272d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 22280e6b8875SHong Zhang Mat_MPIAIJ *b = (Mat_MPIAIJ*)Bt->data; 22290e6b8875SHong Zhang Btseq = b->A; 22300e6b8875SHong Zhang } else { 22310e6b8875SHong Zhang Btseq = Bt; 22320e6b8875SHong Zhang } 22330e6b8875SHong Zhang 2234e3f2db6aSHong Zhang if (!mumps->myid) { 22350e6b8875SHong Zhang ierr = MatSeqAIJGetArray(Btseq,&aa);CHKERRQ(ierr); 22360e6b8875SHong Zhang ierr = MatGetRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 22370e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2238bb599dfdSHong Zhang 2239bb599dfdSHong Zhang mumps->id.irhs_ptr = ia; 2240bb599dfdSHong Zhang mumps->id.irhs_sparse = ja; 2241bb599dfdSHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 2242bb599dfdSHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 2243e3f2db6aSHong Zhang } else { 2244e3f2db6aSHong Zhang mumps->id.irhs_ptr = NULL; 2245e3f2db6aSHong Zhang mumps->id.irhs_sparse = NULL; 2246e3f2db6aSHong Zhang mumps->id.nz_rhs = 0; 2247e3f2db6aSHong Zhang mumps->id.rhs_sparse = NULL; 2248e3f2db6aSHong Zhang } 2249bb599dfdSHong Zhang mumps->id.ICNTL(20) = 1; /* rhs is sparse */ 2250e3f2db6aSHong Zhang mumps->id.ICNTL(21) = 0; /* solution is in assembled centralized format */ 2251bb599dfdSHong Zhang 2252bb599dfdSHong Zhang /* solve phase */ 2253bb599dfdSHong Zhang /*-------------*/ 2254bb599dfdSHong Zhang mumps->id.job = JOB_SOLVE; 22553ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 2256e3f2db6aSHong Zhang if (mumps->id.INFOG(1) < 0) 2257e3f2db6aSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 225814267174SHong Zhang 2259e3f2db6aSHong Zhang if (!mumps->myid) { 22600e6b8875SHong Zhang ierr = MatSeqAIJRestoreArray(Btseq,&aa);CHKERRQ(ierr); 22610e6b8875SHong Zhang ierr = MatRestoreRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 22620e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2263e3f2db6aSHong Zhang } 2264bb599dfdSHong Zhang PetscFunctionReturn(0); 2265bb599dfdSHong Zhang } 2266bb599dfdSHong Zhang 2267bb599dfdSHong Zhang /*@ 226889a9c03aSHong Zhang MatMumpsGetInverse - Get user-specified set of entries in inverse of A 2269bb599dfdSHong Zhang 2270bb599dfdSHong Zhang Logically Collective on Mat 2271bb599dfdSHong Zhang 2272bb599dfdSHong Zhang Input Parameters: 2273bb599dfdSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2274e3f2db6aSHong Zhang - spRHS - sequential sparse matrix in MATTRANSPOSEMAT format holding specified indices in processor[0] 2275bb599dfdSHong Zhang 2276bb599dfdSHong Zhang Output Parameter: 2277e3f2db6aSHong Zhang . spRHS - requested entries of inverse of A 2278bb599dfdSHong Zhang 2279bb599dfdSHong Zhang Level: beginner 2280bb599dfdSHong Zhang 2281bb599dfdSHong Zhang References: 2282bb599dfdSHong Zhang . MUMPS Users' Guide 2283bb599dfdSHong Zhang 2284bb599dfdSHong Zhang .seealso: MatGetFactor(), MatCreateTranspose() 2285bb599dfdSHong Zhang @*/ 228689a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse(Mat F,Mat spRHS) 2287bb599dfdSHong Zhang { 2288bb599dfdSHong Zhang PetscErrorCode ierr; 2289bb599dfdSHong Zhang 2290bb599dfdSHong Zhang PetscFunctionBegin; 2291bb599dfdSHong Zhang PetscValidType(F,1); 2292bb599dfdSHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 229389a9c03aSHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverse_C",(Mat,Mat),(F,spRHS));CHKERRQ(ierr); 2294bb599dfdSHong Zhang PetscFunctionReturn(0); 2295bb599dfdSHong Zhang } 2296bb599dfdSHong Zhang 22970e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose_MUMPS(Mat F,Mat spRHST) 22980e6b8875SHong Zhang { 22990e6b8875SHong Zhang PetscErrorCode ierr; 23000e6b8875SHong Zhang Mat spRHS; 23010e6b8875SHong Zhang 23020e6b8875SHong Zhang PetscFunctionBegin; 23030e6b8875SHong Zhang ierr = MatCreateTranspose(spRHST,&spRHS);CHKERRQ(ierr); 23040e6b8875SHong Zhang ierr = MatMumpsGetInverse_MUMPS(F,spRHS);CHKERRQ(ierr); 23050e6b8875SHong Zhang ierr = MatDestroy(&spRHS);CHKERRQ(ierr); 23060e6b8875SHong Zhang PetscFunctionReturn(0); 23070e6b8875SHong Zhang } 23080e6b8875SHong Zhang 23090e6b8875SHong Zhang /*@ 2310eef1237cSHong Zhang MatMumpsGetInverseTranspose - Get user-specified set of entries in inverse of matrix A^T 23110e6b8875SHong Zhang 23120e6b8875SHong Zhang Logically Collective on Mat 23130e6b8875SHong Zhang 23140e6b8875SHong Zhang Input Parameters: 23150e6b8875SHong Zhang + F - the factored matrix of A obtained by calling MatGetFactor() from PETSc-MUMPS interface 23160e6b8875SHong Zhang - spRHST - sequential sparse matrix in MATAIJ format holding specified indices of A^T in processor[0] 23170e6b8875SHong Zhang 23180e6b8875SHong Zhang Output Parameter: 23190e6b8875SHong Zhang . spRHST - requested entries of inverse of A^T 23200e6b8875SHong Zhang 23210e6b8875SHong Zhang Level: beginner 23220e6b8875SHong Zhang 23230e6b8875SHong Zhang References: 23240e6b8875SHong Zhang . MUMPS Users' Guide 23250e6b8875SHong Zhang 23260e6b8875SHong Zhang .seealso: MatGetFactor(), MatCreateTranspose(), MatMumpsGetInverse() 23270e6b8875SHong Zhang @*/ 23280e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose(Mat F,Mat spRHST) 23290e6b8875SHong Zhang { 23300e6b8875SHong Zhang PetscErrorCode ierr; 23310e6b8875SHong Zhang PetscBool flg; 23320e6b8875SHong Zhang 23330e6b8875SHong Zhang PetscFunctionBegin; 23340e6b8875SHong Zhang PetscValidType(F,1); 23350e6b8875SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 23360e6b8875SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)spRHST,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 23370e6b8875SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)spRHST),PETSC_ERR_ARG_WRONG,"Matrix spRHST must be MATAIJ matrix"); 23380e6b8875SHong Zhang 23390e6b8875SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverseTranspose_C",(Mat,Mat),(F,spRHST));CHKERRQ(ierr); 23400e6b8875SHong Zhang PetscFunctionReturn(0); 23410e6b8875SHong Zhang } 23420e6b8875SHong Zhang 2343a21f80fcSHong Zhang /*@ 2344a21f80fcSHong Zhang MatMumpsGetInfo - Get MUMPS parameter INFO() 2345a21f80fcSHong Zhang 2346a21f80fcSHong Zhang Logically Collective on Mat 2347a21f80fcSHong Zhang 2348a21f80fcSHong Zhang Input Parameters: 2349a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2350a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFO() 2351a21f80fcSHong Zhang 2352a21f80fcSHong Zhang Output Parameter: 2353a21f80fcSHong Zhang . ival - value of MUMPS INFO(icntl) 2354a21f80fcSHong Zhang 2355a21f80fcSHong Zhang Level: beginner 2356a21f80fcSHong Zhang 235796a0c994SBarry Smith References: 235896a0c994SBarry Smith . MUMPS Users' Guide 2359a21f80fcSHong Zhang 23609fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2361a21f80fcSHong Zhang @*/ 2362ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo(Mat F,PetscInt icntl,PetscInt *ival) 2363bc6112feSHong Zhang { 2364bc6112feSHong Zhang PetscErrorCode ierr; 2365bc6112feSHong Zhang 2366bc6112feSHong Zhang PetscFunctionBegin; 23672989dfd4SHong Zhang PetscValidType(F,1); 23682989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2369ca810319SHong Zhang PetscValidIntPointer(ival,3); 23702989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfo_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2371bc6112feSHong Zhang PetscFunctionReturn(0); 2372bc6112feSHong Zhang } 2373bc6112feSHong Zhang 2374a21f80fcSHong Zhang /*@ 2375a21f80fcSHong Zhang MatMumpsGetInfog - Get MUMPS parameter INFOG() 2376a21f80fcSHong Zhang 2377a21f80fcSHong Zhang Logically Collective on Mat 2378a21f80fcSHong Zhang 2379a21f80fcSHong Zhang Input Parameters: 2380a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2381a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFOG() 2382a21f80fcSHong Zhang 2383a21f80fcSHong Zhang Output Parameter: 2384a21f80fcSHong Zhang . ival - value of MUMPS INFOG(icntl) 2385a21f80fcSHong Zhang 2386a21f80fcSHong Zhang Level: beginner 2387a21f80fcSHong Zhang 238896a0c994SBarry Smith References: 238996a0c994SBarry Smith . MUMPS Users' Guide 2390a21f80fcSHong Zhang 23919fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2392a21f80fcSHong Zhang @*/ 2393ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog(Mat F,PetscInt icntl,PetscInt *ival) 2394bc6112feSHong Zhang { 2395bc6112feSHong Zhang PetscErrorCode ierr; 2396bc6112feSHong Zhang 2397bc6112feSHong Zhang PetscFunctionBegin; 23982989dfd4SHong Zhang PetscValidType(F,1); 23992989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2400ca810319SHong Zhang PetscValidIntPointer(ival,3); 24012989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfog_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2402bc6112feSHong Zhang PetscFunctionReturn(0); 2403bc6112feSHong Zhang } 2404bc6112feSHong Zhang 2405a21f80fcSHong Zhang /*@ 2406a21f80fcSHong Zhang MatMumpsGetRinfo - Get MUMPS parameter RINFO() 2407a21f80fcSHong Zhang 2408a21f80fcSHong Zhang Logically Collective on Mat 2409a21f80fcSHong Zhang 2410a21f80fcSHong Zhang Input Parameters: 2411a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2412a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFO() 2413a21f80fcSHong Zhang 2414a21f80fcSHong Zhang Output Parameter: 2415a21f80fcSHong Zhang . val - value of MUMPS RINFO(icntl) 2416a21f80fcSHong Zhang 2417a21f80fcSHong Zhang Level: beginner 2418a21f80fcSHong Zhang 241996a0c994SBarry Smith References: 242096a0c994SBarry Smith . MUMPS Users' Guide 2421a21f80fcSHong Zhang 24229fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2423a21f80fcSHong Zhang @*/ 2424ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo(Mat F,PetscInt icntl,PetscReal *val) 2425bc6112feSHong Zhang { 2426bc6112feSHong Zhang PetscErrorCode ierr; 2427bc6112feSHong Zhang 2428bc6112feSHong Zhang PetscFunctionBegin; 24292989dfd4SHong Zhang PetscValidType(F,1); 24302989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2431bc6112feSHong Zhang PetscValidRealPointer(val,3); 24322989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfo_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2433bc6112feSHong Zhang PetscFunctionReturn(0); 2434bc6112feSHong Zhang } 2435bc6112feSHong Zhang 2436a21f80fcSHong Zhang /*@ 2437a21f80fcSHong Zhang MatMumpsGetRinfog - Get MUMPS parameter RINFOG() 2438a21f80fcSHong Zhang 2439a21f80fcSHong Zhang Logically Collective on Mat 2440a21f80fcSHong Zhang 2441a21f80fcSHong Zhang Input Parameters: 2442a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2443a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFOG() 2444a21f80fcSHong Zhang 2445a21f80fcSHong Zhang Output Parameter: 2446a21f80fcSHong Zhang . val - value of MUMPS RINFOG(icntl) 2447a21f80fcSHong Zhang 2448a21f80fcSHong Zhang Level: beginner 2449a21f80fcSHong Zhang 245096a0c994SBarry Smith References: 245196a0c994SBarry Smith . MUMPS Users' Guide 2452a21f80fcSHong Zhang 24539fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2454a21f80fcSHong Zhang @*/ 2455ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog(Mat F,PetscInt icntl,PetscReal *val) 2456bc6112feSHong Zhang { 2457bc6112feSHong Zhang PetscErrorCode ierr; 2458bc6112feSHong Zhang 2459bc6112feSHong Zhang PetscFunctionBegin; 24602989dfd4SHong Zhang PetscValidType(F,1); 24612989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2462bc6112feSHong Zhang PetscValidRealPointer(val,3); 24632989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfog_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2464bc6112feSHong Zhang PetscFunctionReturn(0); 2465bc6112feSHong Zhang } 2466bc6112feSHong Zhang 246724b6179bSKris Buschelman /*MC 24682692d6eeSBarry Smith MATSOLVERMUMPS - A matrix type providing direct solvers (LU and Cholesky) for 246924b6179bSKris Buschelman distributed and sequential matrices via the external package MUMPS. 247024b6179bSKris Buschelman 247141c8de11SBarry Smith Works with MATAIJ and MATSBAIJ matrices 247224b6179bSKris Buschelman 2473c2b89b5dSBarry Smith Use ./configure --download-mumps --download-scalapack --download-parmetis --download-metis --download-ptscotch to have PETSc installed with MUMPS 2474c2b89b5dSBarry Smith 2475217d3b1eSJunchao Zhang Use ./configure --with-openmp --download-hwloc (or --with-hwloc) to enable running MUMPS in MPI+OpenMP hybrid mode and non-MUMPS in flat-MPI mode. See details below. 2476217d3b1eSJunchao Zhang 24773ca39a21SBarry Smith Use -pc_type cholesky or lu -pc_factor_mat_solver_type mumps to use this direct solver 2478c2b89b5dSBarry Smith 247924b6179bSKris Buschelman Options Database Keys: 24804422a9fcSPatrick Sanan + -mat_mumps_icntl_1 - ICNTL(1): output stream for error messages 24814422a9fcSPatrick Sanan . -mat_mumps_icntl_2 - ICNTL(2): output stream for diagnostic printing, statistics, and warning 24824422a9fcSPatrick Sanan . -mat_mumps_icntl_3 - ICNTL(3): output stream for global information, collected on the host 24834422a9fcSPatrick Sanan . -mat_mumps_icntl_4 - ICNTL(4): level of printing (0 to 4) 24844422a9fcSPatrick Sanan . -mat_mumps_icntl_6 - ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7) 24854422a9fcSPatrick Sanan . -mat_mumps_icntl_7 - ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis 24864422a9fcSPatrick Sanan . -mat_mumps_icntl_8 - ICNTL(8): scaling strategy (-2 to 8 or 77) 24874422a9fcSPatrick Sanan . -mat_mumps_icntl_10 - ICNTL(10): max num of refinements 24884422a9fcSPatrick Sanan . -mat_mumps_icntl_11 - ICNTL(11): statistics related to an error analysis (via -ksp_view) 24894422a9fcSPatrick Sanan . -mat_mumps_icntl_12 - ICNTL(12): an ordering strategy for symmetric matrices (0 to 3) 24904422a9fcSPatrick Sanan . -mat_mumps_icntl_13 - ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting 24914422a9fcSPatrick Sanan . -mat_mumps_icntl_14 - ICNTL(14): percentage increase in the estimated working space 24924422a9fcSPatrick Sanan . -mat_mumps_icntl_19 - ICNTL(19): computes the Schur complement 24934422a9fcSPatrick Sanan . -mat_mumps_icntl_22 - ICNTL(22): in-core/out-of-core factorization and solve (0 or 1) 24944422a9fcSPatrick Sanan . -mat_mumps_icntl_23 - ICNTL(23): max size of the working memory (MB) that can allocate per processor 24954422a9fcSPatrick Sanan . -mat_mumps_icntl_24 - ICNTL(24): detection of null pivot rows (0 or 1) 24964422a9fcSPatrick Sanan . -mat_mumps_icntl_25 - ICNTL(25): compute a solution of a deficient matrix and a null space basis 24974422a9fcSPatrick Sanan . -mat_mumps_icntl_26 - ICNTL(26): drives the solution phase if a Schur complement matrix 24984422a9fcSPatrick Sanan . -mat_mumps_icntl_28 - ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering 24994422a9fcSPatrick Sanan . -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis 25004422a9fcSPatrick Sanan . -mat_mumps_icntl_30 - ICNTL(30): compute user-specified set of entries in inv(A) 25014422a9fcSPatrick Sanan . -mat_mumps_icntl_31 - ICNTL(31): indicates which factors may be discarded during factorization 25024422a9fcSPatrick Sanan . -mat_mumps_icntl_33 - ICNTL(33): compute determinant 2503a0e18203SThibaut Appel . -mat_mumps_icntl_35 - ICNTL(35): level of activation of BLR (Block Low-Rank) feature 2504a0e18203SThibaut Appel . -mat_mumps_icntl_36 - ICNTL(36): controls the choice of BLR factorization variant 2505a0e18203SThibaut Appel . -mat_mumps_icntl_38 - ICNTL(38): sets the estimated compression rate of LU factors with BLR 25064422a9fcSPatrick Sanan . -mat_mumps_cntl_1 - CNTL(1): relative pivoting threshold 25074422a9fcSPatrick Sanan . -mat_mumps_cntl_2 - CNTL(2): stopping criterion of refinement 25084422a9fcSPatrick Sanan . -mat_mumps_cntl_3 - CNTL(3): absolute pivoting threshold 25094422a9fcSPatrick Sanan . -mat_mumps_cntl_4 - CNTL(4): value for static pivoting 2510217d3b1eSJunchao Zhang . -mat_mumps_cntl_5 - CNTL(5): fixation for null pivots 2511a0e18203SThibaut Appel . -mat_mumps_cntl_7 - CNTL(7): precision of the dropping parameter used during BLR factorization 2512217d3b1eSJunchao Zhang - -mat_mumps_use_omp_threads [m] - run MUMPS in MPI+OpenMP hybrid mode as if omp_set_num_threads(m) is called before calling MUMPS. 2513217d3b1eSJunchao Zhang Default might be the number of cores per CPU package (socket) as reported by hwloc and suggested by the MUMPS manual. 251424b6179bSKris Buschelman 251524b6179bSKris Buschelman Level: beginner 251624b6179bSKris Buschelman 251795452b02SPatrick Sanan Notes: 251838548759SBarry Smith MUMPS Cholesky does not handle (complex) Hermitian matrices http://mumps.enseeiht.fr/doc/userguide_5.2.1.pdf so using it will error if the matrix is Hermitian. 251938548759SBarry Smith 2520c0decd05SBarry Smith When a MUMPS factorization fails inside a KSP solve, for example with a KSP_DIVERGED_PC_FAILED, one can find the MUMPS information about the failure by calling 25219fc87aa7SBarry Smith $ KSPGetPC(ksp,&pc); 25229fc87aa7SBarry Smith $ PCFactorGetMatrix(pc,&mat); 25239fc87aa7SBarry Smith $ MatMumpsGetInfo(mat,....); 25249fc87aa7SBarry Smith $ MatMumpsGetInfog(mat,....); etc. 25259fc87aa7SBarry Smith Or you can run with -ksp_error_if_not_converged and the program will be stopped and the information printed in the error message. 25269fc87aa7SBarry Smith 25278fcaa860SBarry Smith Two modes to run MUMPS/PETSc with OpenMP 25288fcaa860SBarry Smith 25298fcaa860SBarry Smith $ Set OMP_NUM_THREADS and run with fewer MPI ranks than cores. For example, if you want to have 16 OpenMP 25308fcaa860SBarry Smith $ threads per rank, then you may use "export OMP_NUM_THREADS=16 && mpirun -n 4 ./test". 25318fcaa860SBarry Smith 25328fcaa860SBarry Smith $ -mat_mumps_use_omp_threads [m] and run your code with as many MPI ranks as the number of cores. For example, 25338fcaa860SBarry Smith $ if a compute node has 32 cores and you run on two nodes, you may use "mpirun -n 64 ./test -mat_mumps_use_omp_threads 16" 25348fcaa860SBarry Smith 25358fcaa860SBarry Smith To run MUMPS in MPI+OpenMP hybrid mode (i.e., enable multithreading in MUMPS), but still run the non-MUMPS part 2536217d3b1eSJunchao Zhang (i.e., PETSc part) of your code in the so-called flat-MPI (aka pure-MPI) mode, you need to configure PETSc with --with-openmp --download-hwloc 2537217d3b1eSJunchao Zhang (or --with-hwloc), and have an MPI that supports MPI-3.0's process shared memory (which is usually available). Since MUMPS calls BLAS 25388fcaa860SBarry Smith libraries, to really get performance, you should have multithreaded BLAS libraries such as Intel MKL, AMD ACML, Cray libSci or OpenBLAS 25398fcaa860SBarry Smith (PETSc will automatically try to utilized a threaded BLAS if --with-openmp is provided). 2540217d3b1eSJunchao Zhang 25418fcaa860SBarry Smith If you run your code through a job submission system, there are caveats in MPI rank mapping. We use MPI_Comm_split_type() to obtain MPI 2542217d3b1eSJunchao Zhang processes on each compute node. Listing the processes in rank ascending order, we split processes on a node into consecutive groups of 2543217d3b1eSJunchao Zhang size m and create a communicator called omp_comm for each group. Rank 0 in an omp_comm is called the master rank, and others in the omp_comm 2544217d3b1eSJunchao Zhang are called slave ranks (or slaves). Only master ranks are seen to MUMPS and slaves are not. We will free CPUs assigned to slaves (might be set 2545217d3b1eSJunchao Zhang by CPU binding policies in job scripts) and make the CPUs available to the master so that OMP threads spawned by MUMPS can run on the CPUs. 2546217d3b1eSJunchao Zhang In a multi-socket compute node, MPI rank mapping is an issue. Still use the above example and suppose your compute node has two sockets, 2547217d3b1eSJunchao Zhang if you interleave MPI ranks on the two sockets, in other words, even ranks are placed on socket 0, and odd ranks are on socket 1, and bind 2548217d3b1eSJunchao Zhang MPI ranks to cores, then with -mat_mumps_use_omp_threads 16, a master rank (and threads it spawns) will use half cores in socket 0, and half 2549217d3b1eSJunchao Zhang cores in socket 1, that definitely hurts locality. On the other hand, if you map MPI ranks consecutively on the two sockets, then the 2550217d3b1eSJunchao Zhang problem will not happen. Therefore, when you use -mat_mumps_use_omp_threads, you need to keep an eye on your MPI rank mapping and CPU binding. 25518fcaa860SBarry Smith For example, with the Slurm job scheduler, one can use srun --cpu-bind=verbose -m block:block to map consecutive MPI ranks to sockets and 2552217d3b1eSJunchao Zhang examine the mapping result. 2553217d3b1eSJunchao Zhang 2554217d3b1eSJunchao Zhang PETSc does not control thread binding in MUMPS. So to get best performance, one still has to set OMP_PROC_BIND and OMP_PLACES in job scripts, 2555217d3b1eSJunchao Zhang for example, export OMP_PLACES=threads and export OMP_PROC_BIND=spread. One does not need to export OMP_NUM_THREADS=m in job scripts as PETSc 2556217d3b1eSJunchao Zhang calls omp_set_num_threads(m) internally before calling MUMPS. 2557217d3b1eSJunchao Zhang 2558217d3b1eSJunchao Zhang References: 2559217d3b1eSJunchao Zhang + 1. - Heroux, Michael A., R. Brightwell, and Michael M. Wolf. "Bi-modal MPI and MPI+ threads computing on scalable multicore systems." IJHPCA (Submitted) (2011). 2560217d3b1eSJunchao Zhang - 2. - Gutierrez, Samuel K., et al. "Accommodating Thread-Level Heterogeneity in Coupled Parallel Applications." Parallel and Distributed Processing Symposium (IPDPS), 2017 IEEE International. IEEE, 2017. 2561217d3b1eSJunchao Zhang 25623ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog(), KSPGetPC(), PCGetFactor(), PCFactorGetMatrix() 256341c8de11SBarry Smith 256424b6179bSKris Buschelman M*/ 256524b6179bSKris Buschelman 2566ea799195SBarry Smith static PetscErrorCode MatFactorGetSolverType_mumps(Mat A,MatSolverType *type) 256735bd34faSBarry Smith { 256835bd34faSBarry Smith PetscFunctionBegin; 25692692d6eeSBarry Smith *type = MATSOLVERMUMPS; 257035bd34faSBarry Smith PetscFunctionReturn(0); 257135bd34faSBarry Smith } 257235bd34faSBarry Smith 2573bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI AIJ matrices */ 2574cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_aij_mumps(Mat A,MatFactorType ftype,Mat *F) 25752877fffaSHong Zhang { 25762877fffaSHong Zhang Mat B; 25772877fffaSHong Zhang PetscErrorCode ierr; 25782877fffaSHong Zhang Mat_MUMPS *mumps; 2579ace3abfcSBarry Smith PetscBool isSeqAIJ; 25802877fffaSHong Zhang 25812877fffaSHong Zhang PetscFunctionBegin; 25822877fffaSHong Zhang /* Create the factorization matrix */ 2583251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ);CHKERRQ(ierr); 2584ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 25852877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2586e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2587e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 25882877fffaSHong Zhang 2589b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 25902205254eSKarl Rupp 25912877fffaSHong Zhang B->ops->view = MatView_MUMPS; 259235bd34faSBarry Smith B->ops->getinfo = MatGetInfo_MUMPS; 25932205254eSKarl Rupp 25943ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 25955a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 25965a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2597bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2598bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2599bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2600bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2601ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2602ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2603ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2604ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 260589a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 26060e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 26076444a565SStefano Zampini 2608450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2609450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 2610d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 2611bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqaij; 2612bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpiaij; 2613746480a1SHong Zhang mumps->sym = 0; 2614dcd589f8SShri Abhyankar } else { 261567877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2616450b117fSShri Abhyankar B->factortype = MAT_FACTOR_CHOLESKY; 2617bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqsbaij; 2618bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpisbaij; 261959ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 262059ac8732SStefano Zampini mumps->sym = 2; 262159ac8732SStefano Zampini #else 26226fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 26236fdc2a6dSBarry Smith else mumps->sym = 2; 262459ac8732SStefano Zampini #endif 2625450b117fSShri Abhyankar } 26262877fffaSHong Zhang 262700c67f3bSHong Zhang /* set solvertype */ 262800c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 262900c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 263000c67f3bSHong Zhang 26312877fffaSHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2632e69c285eSBarry Smith B->data = (void*)mumps; 26332205254eSKarl Rupp 2634f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2635746480a1SHong Zhang 26362877fffaSHong Zhang *F = B; 26372877fffaSHong Zhang PetscFunctionReturn(0); 26382877fffaSHong Zhang } 26392877fffaSHong Zhang 2640bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI SBAIJ matrices */ 2641cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_sbaij_mumps(Mat A,MatFactorType ftype,Mat *F) 26422877fffaSHong Zhang { 26432877fffaSHong Zhang Mat B; 26442877fffaSHong Zhang PetscErrorCode ierr; 26452877fffaSHong Zhang Mat_MUMPS *mumps; 2646ace3abfcSBarry Smith PetscBool isSeqSBAIJ; 26472877fffaSHong Zhang 26482877fffaSHong Zhang PetscFunctionBegin; 2649ce94432eSBarry Smith if (ftype != MAT_FACTOR_CHOLESKY) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with MUMPS LU, use AIJ matrix"); 2650ce94432eSBarry Smith if (A->rmap->bs > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with block size > 1 with MUMPS Cholesky, use AIJ matrix instead"); 2651251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ);CHKERRQ(ierr); 26522877fffaSHong Zhang /* Create the factorization matrix */ 2653ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 26542877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2655e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2656e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2657e69c285eSBarry Smith 2658b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2659bccb9932SShri Abhyankar if (isSeqSBAIJ) { 266016ebf90aSShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_seqsbaij_seqsbaij; 2661dcd589f8SShri Abhyankar } else { 2662bccb9932SShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_mpisbaij_mpisbaij; 2663bccb9932SShri Abhyankar } 2664bccb9932SShri Abhyankar 2665e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 266667877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2667bccb9932SShri Abhyankar B->ops->view = MatView_MUMPS; 26682205254eSKarl Rupp 26693ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 26705a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 26715a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2672b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2673b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2674b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2675b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2676ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2677ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2678ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2679ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 268089a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2681eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 26822205254eSKarl Rupp 2683f4762488SHong Zhang B->factortype = MAT_FACTOR_CHOLESKY; 268459ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 268559ac8732SStefano Zampini mumps->sym = 2; 268659ac8732SStefano Zampini #else 26876fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 26886fdc2a6dSBarry Smith else mumps->sym = 2; 268959ac8732SStefano Zampini #endif 2690a214ac2aSShri Abhyankar 269100c67f3bSHong Zhang /* set solvertype */ 269200c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 269300c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 269400c67f3bSHong Zhang 2695f3c0ef26SHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2696e69c285eSBarry Smith B->data = (void*)mumps; 26972205254eSKarl Rupp 2698f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2699746480a1SHong Zhang 27002877fffaSHong Zhang *F = B; 27012877fffaSHong Zhang PetscFunctionReturn(0); 27022877fffaSHong Zhang } 270397969023SHong Zhang 2704cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_baij_mumps(Mat A,MatFactorType ftype,Mat *F) 270567877ebaSShri Abhyankar { 270667877ebaSShri Abhyankar Mat B; 270767877ebaSShri Abhyankar PetscErrorCode ierr; 270867877ebaSShri Abhyankar Mat_MUMPS *mumps; 2709ace3abfcSBarry Smith PetscBool isSeqBAIJ; 271067877ebaSShri Abhyankar 271167877ebaSShri Abhyankar PetscFunctionBegin; 271267877ebaSShri Abhyankar /* Create the factorization matrix */ 2713251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&isSeqBAIJ);CHKERRQ(ierr); 2714ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 271567877ebaSShri Abhyankar ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2716e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2717e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2718450b117fSShri Abhyankar 2719b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2720450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2721450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_BAIJMUMPS; 2722450b117fSShri Abhyankar B->factortype = MAT_FACTOR_LU; 2723bccb9932SShri Abhyankar if (isSeqBAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqbaij_seqaij; 2724bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpibaij_mpiaij; 2725746480a1SHong Zhang mumps->sym = 0; 2726f23aa3ddSBarry Smith } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc BAIJ matrices with MUMPS Cholesky, use SBAIJ or AIJ matrix instead\n"); 2727bccb9932SShri Abhyankar 2728e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 2729450b117fSShri Abhyankar B->ops->view = MatView_MUMPS; 27302205254eSKarl Rupp 27313ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 27325a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 27335a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2734bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2735bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2736bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2737bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2738ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2739ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2740ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2741ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 274289a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2743eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 2744450b117fSShri Abhyankar 274500c67f3bSHong Zhang /* set solvertype */ 274600c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 274700c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 274800c67f3bSHong Zhang 27497ee00b23SStefano Zampini B->ops->destroy = MatDestroy_MUMPS; 27507ee00b23SStefano Zampini B->data = (void*)mumps; 27517ee00b23SStefano Zampini 27527ee00b23SStefano Zampini ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 27537ee00b23SStefano Zampini 27547ee00b23SStefano Zampini *F = B; 27557ee00b23SStefano Zampini PetscFunctionReturn(0); 27567ee00b23SStefano Zampini } 27577ee00b23SStefano Zampini 27587ee00b23SStefano Zampini /* MatGetFactor for Seq and MPI SELL matrices */ 27597ee00b23SStefano Zampini static PetscErrorCode MatGetFactor_sell_mumps(Mat A,MatFactorType ftype,Mat *F) 27607ee00b23SStefano Zampini { 27617ee00b23SStefano Zampini Mat B; 27627ee00b23SStefano Zampini PetscErrorCode ierr; 27637ee00b23SStefano Zampini Mat_MUMPS *mumps; 27647ee00b23SStefano Zampini PetscBool isSeqSELL; 27657ee00b23SStefano Zampini 27667ee00b23SStefano Zampini PetscFunctionBegin; 27677ee00b23SStefano Zampini /* Create the factorization matrix */ 27687ee00b23SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSELL,&isSeqSELL);CHKERRQ(ierr); 27697ee00b23SStefano Zampini ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 27707ee00b23SStefano Zampini ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 27717ee00b23SStefano Zampini ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 27727ee00b23SStefano Zampini ierr = MatSetUp(B);CHKERRQ(ierr); 27737ee00b23SStefano Zampini 27747ee00b23SStefano Zampini ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 27757ee00b23SStefano Zampini 27767ee00b23SStefano Zampini B->ops->view = MatView_MUMPS; 27777ee00b23SStefano Zampini B->ops->getinfo = MatGetInfo_MUMPS; 27787ee00b23SStefano Zampini 27797ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 27807ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 27817ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 27827ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 27837ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 27847ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 27857ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 27867ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 27877ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 27887ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 27897ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 27907ee00b23SStefano Zampini 27917ee00b23SStefano Zampini if (ftype == MAT_FACTOR_LU) { 27927ee00b23SStefano Zampini B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 27937ee00b23SStefano Zampini B->factortype = MAT_FACTOR_LU; 27947ee00b23SStefano Zampini if (isSeqSELL) mumps->ConvertToTriples = MatConvertToTriples_seqsell_seqaij; 27957ee00b23SStefano Zampini else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 27967ee00b23SStefano Zampini mumps->sym = 0; 27977ee00b23SStefano Zampini } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 27987ee00b23SStefano Zampini 27997ee00b23SStefano Zampini /* set solvertype */ 28007ee00b23SStefano Zampini ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 28017ee00b23SStefano Zampini ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 28027ee00b23SStefano Zampini 2803450b117fSShri Abhyankar B->ops->destroy = MatDestroy_MUMPS; 2804e69c285eSBarry Smith B->data = (void*)mumps; 28052205254eSKarl Rupp 2806f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2807746480a1SHong Zhang 2808450b117fSShri Abhyankar *F = B; 2809450b117fSShri Abhyankar PetscFunctionReturn(0); 2810450b117fSShri Abhyankar } 281142c9c57cSBarry Smith 28123ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_MUMPS(void) 281342c9c57cSBarry Smith { 281442c9c57cSBarry Smith PetscErrorCode ierr; 281542c9c57cSBarry Smith 281642c9c57cSBarry Smith PetscFunctionBegin; 28173ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28183ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28193ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28203ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28213ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPISBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 28223ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28233ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28243ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28253ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28263ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 28277ee00b23SStefano Zampini ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSELL,MAT_FACTOR_LU,MatGetFactor_sell_mumps);CHKERRQ(ierr); 282842c9c57cSBarry Smith PetscFunctionReturn(0); 282942c9c57cSBarry Smith } 283042c9c57cSBarry Smith 2831