11c2a3de1SBarry Smith 2397b6df1SKris Buschelman /* 3a58c3f20SHong Zhang Provides an interface to the MUMPS_4.3.1 sparse solver 4397b6df1SKris Buschelman */ 5397b6df1SKris Buschelman #include "src/mat/impls/aij/seq/aij.h" 6397b6df1SKris Buschelman #include "src/mat/impls/aij/mpi/mpiaij.h" 7397b6df1SKris Buschelman #include "src/mat/impls/sbaij/seq/sbaij.h" 8397b6df1SKris Buschelman #include "src/mat/impls/sbaij/mpi/mpisbaij.h" 9397b6df1SKris Buschelman 10397b6df1SKris Buschelman EXTERN_C_BEGIN 11397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 12397b6df1SKris Buschelman #include "zmumps_c.h" 13397b6df1SKris Buschelman #else 14397b6df1SKris Buschelman #include "dmumps_c.h" 15397b6df1SKris Buschelman #endif 16397b6df1SKris Buschelman EXTERN_C_END 17397b6df1SKris Buschelman #define JOB_INIT -1 18397b6df1SKris Buschelman #define JOB_END -2 19397b6df1SKris Buschelman /* macros s.t. indices match MUMPS documentation */ 20397b6df1SKris Buschelman #define ICNTL(I) icntl[(I)-1] 21397b6df1SKris Buschelman #define CNTL(I) cntl[(I)-1] 22397b6df1SKris Buschelman #define INFOG(I) infog[(I)-1] 23a7aca84bSHong Zhang #define INFO(I) info[(I)-1] 24397b6df1SKris Buschelman #define RINFOG(I) rinfog[(I)-1] 25adc1d99fSHong Zhang #define RINFO(I) rinfo[(I)-1] 26397b6df1SKris Buschelman 27397b6df1SKris Buschelman typedef struct { 28397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 29397b6df1SKris Buschelman ZMUMPS_STRUC_C id; 30397b6df1SKris Buschelman #else 31397b6df1SKris Buschelman DMUMPS_STRUC_C id; 32397b6df1SKris Buschelman #endif 33397b6df1SKris Buschelman MatStructure matstruc; 34397b6df1SKris Buschelman int myid,size,*irn,*jcn,sym; 35397b6df1SKris Buschelman PetscScalar *val; 36397b6df1SKris Buschelman MPI_Comm comm_mumps; 37397b6df1SKris Buschelman 38c338a77dSKris Buschelman PetscTruth isAIJ,CleanUpMUMPS; 396849ba73SBarry Smith PetscErrorCode (*MatDuplicate)(Mat,MatDuplicateOption,Mat*); 406849ba73SBarry Smith PetscErrorCode (*MatView)(Mat,PetscViewer); 416849ba73SBarry Smith PetscErrorCode (*MatAssemblyEnd)(Mat,MatAssemblyType); 426849ba73SBarry Smith PetscErrorCode (*MatLUFactorSymbolic)(Mat,IS,IS,MatFactorInfo*,Mat*); 436849ba73SBarry Smith PetscErrorCode (*MatCholeskyFactorSymbolic)(Mat,IS,MatFactorInfo*,Mat*); 446849ba73SBarry Smith PetscErrorCode (*MatDestroy)(Mat); 456849ba73SBarry Smith PetscErrorCode (*specialdestroy)(Mat); 466849ba73SBarry Smith PetscErrorCode (*MatPreallocate)(Mat,int,int,int*,int,int*); 47f0c56d0fSKris Buschelman } Mat_MUMPS; 48f0c56d0fSKris Buschelman 49dfbe8321SBarry Smith EXTERN PetscErrorCode MatDuplicate_MUMPS(Mat,MatDuplicateOption,Mat*); 50892f6c3fSKris Buschelman EXTERN_C_BEGIN 51dfbe8321SBarry Smith PetscErrorCode MatConvert_SBAIJ_SBAIJMUMPS(Mat,const MatType,Mat*); 52892f6c3fSKris Buschelman EXTERN_C_END 53397b6df1SKris Buschelman /* convert Petsc mpiaij matrix to triples: row[nz], col[nz], val[nz] */ 54397b6df1SKris Buschelman /* 55397b6df1SKris Buschelman input: 5675747be1SHong Zhang A - matrix in mpiaij or mpisbaij (bs=1) format 57397b6df1SKris Buschelman shift - 0: C style output triple; 1: Fortran style output triple. 58397b6df1SKris Buschelman valOnly - FALSE: spaces are allocated and values are set for the triple 59397b6df1SKris Buschelman TRUE: only the values in v array are updated 60397b6df1SKris Buschelman output: 61397b6df1SKris Buschelman nnz - dim of r, c, and v (number of local nonzero entries of A) 62397b6df1SKris Buschelman r, c, v - row and col index, matrix values (matrix triples) 63397b6df1SKris Buschelman */ 64dfbe8321SBarry Smith PetscErrorCode MatConvertToTriples(Mat A,int shift,PetscTruth valOnly,int *nnz,int **r, int **c, PetscScalar **v) { 65397b6df1SKris Buschelman int *ai, *aj, *bi, *bj, rstart,nz, *garray; 66dfbe8321SBarry Smith PetscErrorCode ierr; 67dfbe8321SBarry Smith int i,j,jj,jB,irow,m=A->m,*ajj,*bjj,countA,countB,colA_start,jcol; 68d54de34fSKris Buschelman int *row,*col; 69397b6df1SKris Buschelman PetscScalar *av, *bv,*val; 70f0c56d0fSKris Buschelman Mat_MUMPS *mumps=(Mat_MUMPS*)A->spptr; 71397b6df1SKris Buschelman 72397b6df1SKris Buschelman PetscFunctionBegin; 73397b6df1SKris Buschelman if (mumps->isAIJ){ 74397b6df1SKris Buschelman Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 75397b6df1SKris Buschelman Mat_SeqAIJ *aa=(Mat_SeqAIJ*)(mat->A)->data; 76397b6df1SKris Buschelman Mat_SeqAIJ *bb=(Mat_SeqAIJ*)(mat->B)->data; 77397b6df1SKris Buschelman nz = aa->nz + bb->nz; 78397b6df1SKris Buschelman ai=aa->i; aj=aa->j; bi=bb->i; bj=bb->j; rstart= mat->rstart; 79397b6df1SKris Buschelman garray = mat->garray; 80397b6df1SKris Buschelman av=aa->a; bv=bb->a; 81397b6df1SKris Buschelman 82397b6df1SKris Buschelman } else { 83397b6df1SKris Buschelman Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)A->data; 84397b6df1SKris Buschelman Mat_SeqSBAIJ *aa=(Mat_SeqSBAIJ*)(mat->A)->data; 85397b6df1SKris Buschelman Mat_SeqBAIJ *bb=(Mat_SeqBAIJ*)(mat->B)->data; 86521d7252SBarry Smith if (A->bs > 1) SETERRQ1(PETSC_ERR_SUP," bs=%d is not supported yet\n", A->bs); 876c6c5352SBarry Smith nz = aa->nz + bb->nz; 88397b6df1SKris Buschelman ai=aa->i; aj=aa->j; bi=bb->i; bj=bb->j; rstart= mat->rstart; 89397b6df1SKris Buschelman garray = mat->garray; 90397b6df1SKris Buschelman av=aa->a; bv=bb->a; 91397b6df1SKris Buschelman } 92397b6df1SKris Buschelman 93397b6df1SKris Buschelman if (!valOnly){ 94397b6df1SKris Buschelman ierr = PetscMalloc(nz*sizeof(int),&row);CHKERRQ(ierr); 95397b6df1SKris Buschelman ierr = PetscMalloc(nz*sizeof(int),&col);CHKERRQ(ierr); 96397b6df1SKris Buschelman ierr = PetscMalloc(nz*sizeof(PetscScalar),&val);CHKERRQ(ierr); 97397b6df1SKris Buschelman *r = row; *c = col; *v = val; 98397b6df1SKris Buschelman } else { 99397b6df1SKris Buschelman row = *r; col = *c; val = *v; 100397b6df1SKris Buschelman } 101397b6df1SKris Buschelman *nnz = nz; 102397b6df1SKris Buschelman 103028e57e8SHong Zhang jj = 0; irow = rstart; 104397b6df1SKris Buschelman for ( i=0; i<m; i++ ) { 105397b6df1SKris Buschelman ajj = aj + ai[i]; /* ptr to the beginning of this row */ 106397b6df1SKris Buschelman countA = ai[i+1] - ai[i]; 107397b6df1SKris Buschelman countB = bi[i+1] - bi[i]; 108397b6df1SKris Buschelman bjj = bj + bi[i]; 109397b6df1SKris Buschelman 110397b6df1SKris Buschelman /* get jB, the starting local col index for the 2nd B-part */ 111397b6df1SKris Buschelman colA_start = rstart + ajj[0]; /* the smallest col index for A */ 11275747be1SHong Zhang j=-1; 11375747be1SHong Zhang do { 11475747be1SHong Zhang j++; 11575747be1SHong Zhang if (j == countB) break; 116397b6df1SKris Buschelman jcol = garray[bjj[j]]; 11775747be1SHong Zhang } while (jcol < colA_start); 11875747be1SHong Zhang jB = j; 119397b6df1SKris Buschelman 120397b6df1SKris Buschelman /* B-part, smaller col index */ 121397b6df1SKris Buschelman colA_start = rstart + ajj[0]; /* the smallest col index for A */ 122397b6df1SKris Buschelman for (j=0; j<jB; j++){ 123397b6df1SKris Buschelman jcol = garray[bjj[j]]; 124397b6df1SKris Buschelman if (!valOnly){ 125397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = jcol + shift; 12675747be1SHong Zhang 127397b6df1SKris Buschelman } 128397b6df1SKris Buschelman val[jj++] = *bv++; 129397b6df1SKris Buschelman } 130397b6df1SKris Buschelman /* A-part */ 131397b6df1SKris Buschelman for (j=0; j<countA; j++){ 132397b6df1SKris Buschelman if (!valOnly){ 133397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 134397b6df1SKris Buschelman } 135397b6df1SKris Buschelman val[jj++] = *av++; 136397b6df1SKris Buschelman } 137397b6df1SKris Buschelman /* B-part, larger col index */ 138397b6df1SKris Buschelman for (j=jB; j<countB; j++){ 139397b6df1SKris Buschelman if (!valOnly){ 140397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 141397b6df1SKris Buschelman } 142397b6df1SKris Buschelman val[jj++] = *bv++; 143397b6df1SKris Buschelman } 144397b6df1SKris Buschelman irow++; 145397b6df1SKris Buschelman } 146397b6df1SKris Buschelman 147397b6df1SKris Buschelman PetscFunctionReturn(0); 148397b6df1SKris Buschelman } 149397b6df1SKris Buschelman 150c338a77dSKris Buschelman EXTERN_C_BEGIN 151c338a77dSKris Buschelman #undef __FUNCT__ 152c338a77dSKris Buschelman #define __FUNCT__ "MatConvert_MUMPS_Base" 153521d7252SBarry Smith PetscErrorCode MatConvert_MUMPS_Base(Mat A,const MatType type,Mat *newmat) \ 154521d7252SBarry Smith { 155dfbe8321SBarry Smith PetscErrorCode ierr; 156c338a77dSKris Buschelman Mat B=*newmat; 157f0c56d0fSKris Buschelman Mat_MUMPS *mumps=(Mat_MUMPS*)A->spptr; 158901853e0SKris Buschelman void (*f)(void); 159c338a77dSKris Buschelman 160c338a77dSKris Buschelman PetscFunctionBegin; 161c338a77dSKris Buschelman if (B != A) { 162c338a77dSKris Buschelman ierr = MatDuplicate(A,MAT_COPY_VALUES,&B);CHKERRQ(ierr); 163c338a77dSKris Buschelman } 164f0c56d0fSKris Buschelman B->ops->duplicate = mumps->MatDuplicate; 165f0c56d0fSKris Buschelman B->ops->view = mumps->MatView; 166f0c56d0fSKris Buschelman B->ops->assemblyend = mumps->MatAssemblyEnd; 167f0c56d0fSKris Buschelman B->ops->lufactorsymbolic = mumps->MatLUFactorSymbolic; 168f0c56d0fSKris Buschelman B->ops->choleskyfactorsymbolic = mumps->MatCholeskyFactorSymbolic; 169f0c56d0fSKris Buschelman B->ops->destroy = mumps->MatDestroy; 170901853e0SKris Buschelman 171901853e0SKris Buschelman ierr = PetscObjectQueryFunction((PetscObject)B,"MatMPISBAIJSetPreallocation_C",&f);CHKERRQ(ierr); 172901853e0SKris Buschelman if (f) { 173d1390fe9SSatish Balay ierr = PetscObjectComposeFunction((PetscObject)B,"MatMPISBAIJSetPreallocation_C","",(FCNVOID)mumps->MatPreallocate);CHKERRQ(ierr); 174901853e0SKris Buschelman } 175f0c56d0fSKris Buschelman ierr = PetscFree(mumps);CHKERRQ(ierr); 176901853e0SKris Buschelman 177901853e0SKris Buschelman ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_seqaij_aijmumps_C","",PETSC_NULL);CHKERRQ(ierr); 178901853e0SKris Buschelman ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_aijmumps_seqaij_C","",PETSC_NULL);CHKERRQ(ierr); 179901853e0SKris Buschelman ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpiaij_aijmumps_C","",PETSC_NULL);CHKERRQ(ierr); 180901853e0SKris Buschelman ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_aijmumps_mpiaij_C","",PETSC_NULL);CHKERRQ(ierr); 1812895b8caSSatish Balay ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_seqsbaij_sbaijmumps_C","",PETSC_NULL);CHKERRQ(ierr); 1822895b8caSSatish Balay ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_sbaijmumps_seqsbaij_C","",PETSC_NULL);CHKERRQ(ierr); 183901853e0SKris Buschelman ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpisbaij_sbaijmumps_C","",PETSC_NULL);CHKERRQ(ierr); 184901853e0SKris Buschelman ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_sbaijmumps_mpisbaij_C","",PETSC_NULL);CHKERRQ(ierr); 185901853e0SKris Buschelman 186901853e0SKris Buschelman ierr = PetscObjectChangeTypeName((PetscObject)B,type);CHKERRQ(ierr); 187c338a77dSKris Buschelman *newmat = B; 188c338a77dSKris Buschelman PetscFunctionReturn(0); 189c338a77dSKris Buschelman } 190c338a77dSKris Buschelman EXTERN_C_END 191c338a77dSKris Buschelman 192397b6df1SKris Buschelman #undef __FUNCT__ 1933924e44cSKris Buschelman #define __FUNCT__ "MatDestroy_MUMPS" 194dfbe8321SBarry Smith PetscErrorCode MatDestroy_MUMPS(Mat A) 195dfbe8321SBarry Smith { 196f0c56d0fSKris Buschelman Mat_MUMPS *lu=(Mat_MUMPS*)A->spptr; 197dfbe8321SBarry Smith PetscErrorCode ierr; 198dfbe8321SBarry Smith int size=lu->size; 1996849ba73SBarry Smith PetscErrorCode (*specialdestroy)(Mat); 200397b6df1SKris Buschelman PetscFunctionBegin; 201397b6df1SKris Buschelman if (lu->CleanUpMUMPS) { 202397b6df1SKris Buschelman /* Terminate instance, deallocate memories */ 203397b6df1SKris Buschelman lu->id.job=JOB_END; 204397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 205397b6df1SKris Buschelman zmumps_c(&lu->id); 206397b6df1SKris Buschelman #else 207397b6df1SKris Buschelman dmumps_c(&lu->id); 208397b6df1SKris Buschelman #endif 209c338a77dSKris Buschelman if (lu->irn) { 210c338a77dSKris Buschelman ierr = PetscFree(lu->irn);CHKERRQ(ierr); 211c338a77dSKris Buschelman } 212c338a77dSKris Buschelman if (lu->jcn) { 213c338a77dSKris Buschelman ierr = PetscFree(lu->jcn);CHKERRQ(ierr); 214c338a77dSKris Buschelman } 215c338a77dSKris Buschelman if (size>1 && lu->val) { 216c338a77dSKris Buschelman ierr = PetscFree(lu->val);CHKERRQ(ierr); 217c338a77dSKris Buschelman } 218397b6df1SKris Buschelman ierr = MPI_Comm_free(&(lu->comm_mumps));CHKERRQ(ierr); 219397b6df1SKris Buschelman } 220a39386dcSKris Buschelman specialdestroy = lu->specialdestroy; 221a39386dcSKris Buschelman ierr = (*specialdestroy)(A);CHKERRQ(ierr); 222c338a77dSKris Buschelman ierr = (*A->ops->destroy)(A);CHKERRQ(ierr); 223397b6df1SKris Buschelman PetscFunctionReturn(0); 224397b6df1SKris Buschelman } 225397b6df1SKris Buschelman 226397b6df1SKris Buschelman #undef __FUNCT__ 227a39386dcSKris Buschelman #define __FUNCT__ "MatDestroy_AIJMUMPS" 228dfbe8321SBarry Smith PetscErrorCode MatDestroy_AIJMUMPS(Mat A) 229dfbe8321SBarry Smith { 2306849ba73SBarry Smith PetscErrorCode ierr; 2316849ba73SBarry Smith int size; 232a39386dcSKris Buschelman 233a39386dcSKris Buschelman PetscFunctionBegin; 234a39386dcSKris Buschelman ierr = MPI_Comm_size(A->comm,&size);CHKERRQ(ierr); 235a39386dcSKris Buschelman if (size==1) { 236a39386dcSKris Buschelman ierr = MatConvert_MUMPS_Base(A,MATSEQAIJ,&A);CHKERRQ(ierr); 237a39386dcSKris Buschelman } else { 238a39386dcSKris Buschelman ierr = MatConvert_MUMPS_Base(A,MATMPIAIJ,&A);CHKERRQ(ierr); 239a39386dcSKris Buschelman } 240a39386dcSKris Buschelman PetscFunctionReturn(0); 241a39386dcSKris Buschelman } 242a39386dcSKris Buschelman 243a39386dcSKris Buschelman #undef __FUNCT__ 244a39386dcSKris Buschelman #define __FUNCT__ "MatDestroy_SBAIJMUMPS" 245dfbe8321SBarry Smith PetscErrorCode MatDestroy_SBAIJMUMPS(Mat A) 246dfbe8321SBarry Smith { 2476849ba73SBarry Smith PetscErrorCode ierr; 2486849ba73SBarry Smith int size; 249a39386dcSKris Buschelman 250a39386dcSKris Buschelman PetscFunctionBegin; 251a39386dcSKris Buschelman ierr = MPI_Comm_size(A->comm,&size);CHKERRQ(ierr); 252a39386dcSKris Buschelman if (size==1) { 253a39386dcSKris Buschelman ierr = MatConvert_MUMPS_Base(A,MATSEQSBAIJ,&A);CHKERRQ(ierr); 254a39386dcSKris Buschelman } else { 255a39386dcSKris Buschelman ierr = MatConvert_MUMPS_Base(A,MATMPISBAIJ,&A);CHKERRQ(ierr); 256a39386dcSKris Buschelman } 257a39386dcSKris Buschelman PetscFunctionReturn(0); 258a39386dcSKris Buschelman } 259a39386dcSKris Buschelman 260a39386dcSKris Buschelman #undef __FUNCT__ 261c338a77dSKris Buschelman #define __FUNCT__ "MatFactorInfo_MUMPS" 262dfbe8321SBarry Smith PetscErrorCode MatFactorInfo_MUMPS(Mat A,PetscViewer viewer) { 263f0c56d0fSKris Buschelman Mat_MUMPS *lu=(Mat_MUMPS*)A->spptr; 264dfbe8321SBarry Smith PetscErrorCode ierr; 265397b6df1SKris Buschelman 266397b6df1SKris Buschelman PetscFunctionBegin; 267c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer,"MUMPS run parameters:\n");CHKERRQ(ierr); 268c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," SYM (matrix type): %d \n",lu->id.sym);CHKERRQ(ierr); 269c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," PAR (host participation): %d \n",lu->id.par);CHKERRQ(ierr); 270c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(4) (level of printing): %d \n",lu->id.ICNTL(4));CHKERRQ(ierr); 271c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(5) (input mat struct): %d \n",lu->id.ICNTL(5));CHKERRQ(ierr); 272c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(6) (matrix prescaling): %d \n",lu->id.ICNTL(6));CHKERRQ(ierr); 273c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(7) (matrix ordering): %d \n",lu->id.ICNTL(7));CHKERRQ(ierr); 274c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(9) (A/A^T x=b is solved): %d \n",lu->id.ICNTL(9));CHKERRQ(ierr); 275c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(10) (max num of refinements): %d \n",lu->id.ICNTL(10));CHKERRQ(ierr); 276c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(11) (error analysis): %d \n",lu->id.ICNTL(11));CHKERRQ(ierr); 277958c9bccSBarry Smith if (!lu->myid && lu->id.ICNTL(11)>0) { 278c338a77dSKris Buschelman ierr = PetscPrintf(PETSC_COMM_SELF," RINFOG(4) (inf norm of input mat): %g\n",lu->id.RINFOG(4));CHKERRQ(ierr); 279c338a77dSKris Buschelman ierr = PetscPrintf(PETSC_COMM_SELF," RINFOG(5) (inf norm of solution): %g\n",lu->id.RINFOG(5));CHKERRQ(ierr); 280c338a77dSKris Buschelman ierr = PetscPrintf(PETSC_COMM_SELF," RINFOG(6) (inf norm of residual): %g\n",lu->id.RINFOG(6));CHKERRQ(ierr); 281c338a77dSKris Buschelman ierr = PetscPrintf(PETSC_COMM_SELF," RINFOG(7),RINFOG(8) (backward error est): %g, %g\n",lu->id.RINFOG(7),lu->id.RINFOG(8));CHKERRQ(ierr); 282c338a77dSKris Buschelman ierr = PetscPrintf(PETSC_COMM_SELF," RINFOG(9) (error estimate): %g \n",lu->id.RINFOG(9));CHKERRQ(ierr); 283c338a77dSKris Buschelman ierr = PetscPrintf(PETSC_COMM_SELF," RINFOG(10),RINFOG(11)(condition numbers): %g, %g\n",lu->id.RINFOG(10),lu->id.RINFOG(11));CHKERRQ(ierr); 284c338a77dSKris Buschelman 285c338a77dSKris Buschelman } 286c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(12) (efficiency control): %d \n",lu->id.ICNTL(12));CHKERRQ(ierr); 287c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(13) (efficiency control): %d \n",lu->id.ICNTL(13));CHKERRQ(ierr); 288adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(14) (percentage of estimated workspace increase): %d \n",lu->id.ICNTL(14));CHKERRQ(ierr); 289c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(15) (efficiency control): %d \n",lu->id.ICNTL(15));CHKERRQ(ierr); 290c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(18) (input mat struct): %d \n",lu->id.ICNTL(18));CHKERRQ(ierr); 291c338a77dSKris Buschelman 292c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," CNTL(1) (relative pivoting threshold): %g \n",lu->id.CNTL(1));CHKERRQ(ierr); 293c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," CNTL(2) (stopping criterion of refinement): %g \n",lu->id.CNTL(2));CHKERRQ(ierr); 294c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," CNTL(3) (absolute pivoting threshold): %g \n",lu->id.CNTL(3));CHKERRQ(ierr); 29557f0c58bSHong Zhang 29657f0c58bSHong Zhang /* infomation local to each processor */ 297958c9bccSBarry Smith if (!lu->myid) ierr = PetscPrintf(PETSC_COMM_SELF, " RINFO(1) (local estimated flops for the elimination after analysis): \n");CHKERRQ(ierr); 29857f0c58bSHong Zhang ierr = PetscSynchronizedPrintf(A->comm," [%d] %g \n",lu->myid,lu->id.RINFO(1));CHKERRQ(ierr); 29957f0c58bSHong Zhang ierr = PetscSynchronizedFlush(A->comm); 300958c9bccSBarry Smith if (!lu->myid) ierr = PetscPrintf(PETSC_COMM_SELF, " RINFO(2) (local estimated flops for the assembly after factorization): \n");CHKERRQ(ierr); 30157f0c58bSHong Zhang ierr = PetscSynchronizedPrintf(A->comm," [%d] %g \n",lu->myid,lu->id.RINFO(2));CHKERRQ(ierr); 30257f0c58bSHong Zhang ierr = PetscSynchronizedFlush(A->comm); 303958c9bccSBarry Smith if (!lu->myid) ierr = PetscPrintf(PETSC_COMM_SELF, " RINFO(3) (local estimated flops for the elimination after factorization): \n");CHKERRQ(ierr); 30457f0c58bSHong Zhang ierr = PetscSynchronizedPrintf(A->comm," [%d] %g \n",lu->myid,lu->id.RINFO(3));CHKERRQ(ierr); 30557f0c58bSHong Zhang ierr = PetscSynchronizedFlush(A->comm); 306adc1d99fSHong Zhang 307958c9bccSBarry Smith if (!lu->myid){ /* information from the host */ 308adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(1) (global estimated flops for the elimination after analysis): %g \n",lu->id.RINFOG(1));CHKERRQ(ierr); 309adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(2) (global estimated flops for the assembly after factorization): %g \n",lu->id.RINFOG(2));CHKERRQ(ierr); 310adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(3) (global estimated flops for the elimination after factorization): %g \n",lu->id.RINFOG(3));CHKERRQ(ierr); 311adc1d99fSHong Zhang 312adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(3) (estimated real workspace for factors on all processors after analysis): %d \n",lu->id.INFOG(3));CHKERRQ(ierr); 313adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(4) (estimated integer workspace for factors on all processors after analysis): %d \n",lu->id.INFOG(4));CHKERRQ(ierr); 314adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(5) (estimated maximum front size in the complete tree): %d \n",lu->id.INFOG(5));CHKERRQ(ierr); 315adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(6) (number of nodes in the complete tree): %d \n",lu->id.INFOG(6));CHKERRQ(ierr); 316adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(7) (ordering option effectively uese after analysis): %d \n",lu->id.INFOG(7));CHKERRQ(ierr); 317adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(8) (structural symmetry in percent of the permuted matrix after analysis): %d \n",lu->id.INFOG(8));CHKERRQ(ierr); 318adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(9) (total real space store the matrix factors after analysis): %d \n",lu->id.INFOG(9));CHKERRQ(ierr); 319adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(10) (total integer space store the matrix factors after analysis): %d \n",lu->id.INFOG(10));CHKERRQ(ierr); 320adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(11) (order of largest frontal matrix): %d \n",lu->id.INFOG(11));CHKERRQ(ierr); 321adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(12) (number of off-diagonal pivots): %d \n",lu->id.INFOG(12));CHKERRQ(ierr); 322adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(13) (number of delayed pivots after factorization): %d \n",lu->id.INFOG(13));CHKERRQ(ierr); 323adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(14) (number of memory compress after factorization): %d \n",lu->id.INFOG(14));CHKERRQ(ierr); 324adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(15) (number of steps of iterative refinement after solution): %d \n",lu->id.INFOG(15));CHKERRQ(ierr); 325adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(16) (estimated size (in million of bytes) of all MUMPS internal data for factorization after analysis: value on the most memory consuming processor): %d \n",lu->id.INFOG(16));CHKERRQ(ierr); 326adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(17) (estimated size of all MUMPS internal data for factorization after analysis: sum over all processors): %d \n",lu->id.INFOG(17));CHKERRQ(ierr); 327adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(18) (size of all MUMPS internal data allocated during factorization: value on the most memory consuming processor): %d \n",lu->id.INFOG(18));CHKERRQ(ierr); 328adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(19) (size of all MUMPS internal data allocated during factorization: sum over all processors): %d \n",lu->id.INFOG(19));CHKERRQ(ierr); 329adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(20) (estimated number of entries in the factors): %d \n",lu->id.INFOG(20));CHKERRQ(ierr); 330adc1d99fSHong Zhang } 331adc1d99fSHong Zhang 332397b6df1SKris Buschelman PetscFunctionReturn(0); 333397b6df1SKris Buschelman } 334397b6df1SKris Buschelman 335397b6df1SKris Buschelman #undef __FUNCT__ 336f0c56d0fSKris Buschelman #define __FUNCT__ "MatView_AIJMUMPS" 337dfbe8321SBarry Smith PetscErrorCode MatView_AIJMUMPS(Mat A,PetscViewer viewer) { 338dfbe8321SBarry Smith PetscErrorCode ierr; 33932077d6dSBarry Smith PetscTruth iascii; 340397b6df1SKris Buschelman PetscViewerFormat format; 341f0c56d0fSKris Buschelman Mat_MUMPS *mumps=(Mat_MUMPS*)(A->spptr); 342397b6df1SKris Buschelman 343397b6df1SKris Buschelman PetscFunctionBegin; 344397b6df1SKris Buschelman ierr = (*mumps->MatView)(A,viewer);CHKERRQ(ierr); 345397b6df1SKris Buschelman 34632077d6dSBarry Smith ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&iascii);CHKERRQ(ierr); 34732077d6dSBarry Smith if (iascii) { 348397b6df1SKris Buschelman ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 349397b6df1SKris Buschelman if (format == PETSC_VIEWER_ASCII_FACTOR_INFO) { 350397b6df1SKris Buschelman ierr = MatFactorInfo_MUMPS(A,viewer);CHKERRQ(ierr); 351397b6df1SKris Buschelman } 352397b6df1SKris Buschelman } 353397b6df1SKris Buschelman PetscFunctionReturn(0); 354397b6df1SKris Buschelman } 355397b6df1SKris Buschelman 356397b6df1SKris Buschelman #undef __FUNCT__ 357f0c56d0fSKris Buschelman #define __FUNCT__ "MatSolve_AIJMUMPS" 358dfbe8321SBarry Smith PetscErrorCode MatSolve_AIJMUMPS(Mat A,Vec b,Vec x) { 359f0c56d0fSKris Buschelman Mat_MUMPS *lu=(Mat_MUMPS*)A->spptr; 360d54de34fSKris Buschelman PetscScalar *array; 361397b6df1SKris Buschelman Vec x_seq; 362397b6df1SKris Buschelman IS iden; 363397b6df1SKris Buschelman VecScatter scat; 364dfbe8321SBarry Smith PetscErrorCode ierr; 365397b6df1SKris Buschelman 366397b6df1SKris Buschelman PetscFunctionBegin; 367397b6df1SKris Buschelman if (lu->size > 1){ 368397b6df1SKris Buschelman if (!lu->myid){ 369397b6df1SKris Buschelman ierr = VecCreateSeq(PETSC_COMM_SELF,A->N,&x_seq);CHKERRQ(ierr); 370397b6df1SKris Buschelman ierr = ISCreateStride(PETSC_COMM_SELF,A->N,0,1,&iden);CHKERRQ(ierr); 371397b6df1SKris Buschelman } else { 372397b6df1SKris Buschelman ierr = VecCreateSeq(PETSC_COMM_SELF,0,&x_seq);CHKERRQ(ierr); 373397b6df1SKris Buschelman ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&iden);CHKERRQ(ierr); 374397b6df1SKris Buschelman } 375397b6df1SKris Buschelman ierr = VecScatterCreate(b,iden,x_seq,iden,&scat);CHKERRQ(ierr); 376397b6df1SKris Buschelman ierr = ISDestroy(iden);CHKERRQ(ierr); 377397b6df1SKris Buschelman 378397b6df1SKris Buschelman ierr = VecScatterBegin(b,x_seq,INSERT_VALUES,SCATTER_FORWARD,scat);CHKERRQ(ierr); 379397b6df1SKris Buschelman ierr = VecScatterEnd(b,x_seq,INSERT_VALUES,SCATTER_FORWARD,scat);CHKERRQ(ierr); 380397b6df1SKris Buschelman if (!lu->myid) {ierr = VecGetArray(x_seq,&array);CHKERRQ(ierr);} 381397b6df1SKris Buschelman } else { /* size == 1 */ 382397b6df1SKris Buschelman ierr = VecCopy(b,x);CHKERRQ(ierr); 383397b6df1SKris Buschelman ierr = VecGetArray(x,&array);CHKERRQ(ierr); 384397b6df1SKris Buschelman } 385397b6df1SKris Buschelman if (!lu->myid) { /* define rhs on the host */ 386397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 387397b6df1SKris Buschelman lu->id.rhs = (mumps_double_complex*)array; 388397b6df1SKris Buschelman #else 389397b6df1SKris Buschelman lu->id.rhs = array; 390397b6df1SKris Buschelman #endif 391397b6df1SKris Buschelman } 392397b6df1SKris Buschelman 393397b6df1SKris Buschelman /* solve phase */ 394397b6df1SKris Buschelman lu->id.job=3; 395397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 396397b6df1SKris Buschelman zmumps_c(&lu->id); 397397b6df1SKris Buschelman #else 398397b6df1SKris Buschelman dmumps_c(&lu->id); 399397b6df1SKris Buschelman #endif 400397b6df1SKris Buschelman if (lu->id.INFOG(1) < 0) { 40179a5c55eSBarry Smith SETERRQ1(PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",lu->id.INFOG(1)); 402397b6df1SKris Buschelman } 403397b6df1SKris Buschelman 404397b6df1SKris Buschelman /* convert mumps solution x_seq to petsc mpi x */ 405397b6df1SKris Buschelman if (lu->size > 1) { 406397b6df1SKris Buschelman if (!lu->myid){ 407397b6df1SKris Buschelman ierr = VecRestoreArray(x_seq,&array);CHKERRQ(ierr); 408397b6df1SKris Buschelman } 409397b6df1SKris Buschelman ierr = VecScatterBegin(x_seq,x,INSERT_VALUES,SCATTER_REVERSE,scat);CHKERRQ(ierr); 410397b6df1SKris Buschelman ierr = VecScatterEnd(x_seq,x,INSERT_VALUES,SCATTER_REVERSE,scat);CHKERRQ(ierr); 411397b6df1SKris Buschelman ierr = VecScatterDestroy(scat);CHKERRQ(ierr); 412397b6df1SKris Buschelman ierr = VecDestroy(x_seq);CHKERRQ(ierr); 413397b6df1SKris Buschelman } else { 414397b6df1SKris Buschelman ierr = VecRestoreArray(x,&array);CHKERRQ(ierr); 415397b6df1SKris Buschelman } 416397b6df1SKris Buschelman 417397b6df1SKris Buschelman PetscFunctionReturn(0); 418397b6df1SKris Buschelman } 419397b6df1SKris Buschelman 420a58c3f20SHong Zhang /* 421a58c3f20SHong Zhang input: 422a58c3f20SHong Zhang F: numeric factor 423a58c3f20SHong Zhang output: 424a58c3f20SHong Zhang nneg: total number of negative pivots 425a58c3f20SHong Zhang nzero: 0 426a58c3f20SHong Zhang npos: (global dimension of F) - nneg 427a58c3f20SHong Zhang */ 428a58c3f20SHong Zhang 429a58c3f20SHong Zhang #undef __FUNCT__ 430a58c3f20SHong Zhang #define __FUNCT__ "MatGetInertia_SBAIJMUMPS" 431dfbe8321SBarry Smith PetscErrorCode MatGetInertia_SBAIJMUMPS(Mat F,int *nneg,int *nzero,int *npos) 432a58c3f20SHong Zhang { 433a58c3f20SHong Zhang Mat_MUMPS *lu =(Mat_MUMPS*)F->spptr; 434dfbe8321SBarry Smith PetscErrorCode ierr; 435dfbe8321SBarry Smith int size; 436a58c3f20SHong Zhang 437a58c3f20SHong Zhang PetscFunctionBegin; 438bcb30aebSHong Zhang ierr = MPI_Comm_size(F->comm,&size);CHKERRQ(ierr); 439bcb30aebSHong Zhang /* MUMPS 4.3.1 calls ScaLAPACK when ICNTL(13)=0 (default), which does not offer the possibility to compute the inertia of a dense matrix. Set ICNTL(13)=1 to skip ScaLAPACK */ 440bcb30aebSHong Zhang if (size > 1 && lu->id.ICNTL(13) != 1){ 44179a5c55eSBarry Smith SETERRQ1(PETSC_ERR_ARG_WRONG,"ICNTL(13)=%d. -mat_mumps_icntl_13 must be set as 1 for correct global matrix inertia\n",lu->id.INFOG(13)); 442bcb30aebSHong Zhang } 443a58c3f20SHong Zhang if (nneg){ 444a58c3f20SHong Zhang if (!lu->myid){ 445a58c3f20SHong Zhang *nneg = lu->id.INFOG(12); 446a58c3f20SHong Zhang } 447bcb30aebSHong Zhang ierr = MPI_Bcast(nneg,1,MPI_INT,0,lu->comm_mumps);CHKERRQ(ierr); 448a58c3f20SHong Zhang } 449a58c3f20SHong Zhang if (nzero) *nzero = 0; 450a58c3f20SHong Zhang if (npos) *npos = F->M - (*nneg); 451a58c3f20SHong Zhang PetscFunctionReturn(0); 452a58c3f20SHong Zhang } 453a58c3f20SHong Zhang 454397b6df1SKris Buschelman #undef __FUNCT__ 45519facb7aSBarry Smith #define __FUNCT__ "MatFactorNumeric_AIJMUMPS" 456af281ebdSHong Zhang PetscErrorCode MatFactorNumeric_AIJMUMPS(Mat A,MatFactorInfo *info,Mat *F) 457af281ebdSHong Zhang { 458f0c56d0fSKris Buschelman Mat_MUMPS *lu =(Mat_MUMPS*)(*F)->spptr; 459f0c56d0fSKris Buschelman Mat_MUMPS *lua=(Mat_MUMPS*)(A)->spptr; 4606849ba73SBarry Smith PetscErrorCode ierr; 461af281ebdSHong Zhang PetscInt rnz,nnz,nz,i,M=A->M,*ai,*aj,icntl; 462397b6df1SKris Buschelman PetscTruth valOnly,flg; 463397b6df1SKris Buschelman 464397b6df1SKris Buschelman PetscFunctionBegin; 465397b6df1SKris Buschelman if (lu->matstruc == DIFFERENT_NONZERO_PATTERN){ 466f0c56d0fSKris Buschelman (*F)->ops->solve = MatSolve_AIJMUMPS; 467397b6df1SKris Buschelman 468397b6df1SKris Buschelman /* Initialize a MUMPS instance */ 469397b6df1SKris Buschelman ierr = MPI_Comm_rank(A->comm, &lu->myid); 470397b6df1SKris Buschelman ierr = MPI_Comm_size(A->comm,&lu->size);CHKERRQ(ierr); 47175747be1SHong Zhang lua->myid = lu->myid; lua->size = lu->size; 472397b6df1SKris Buschelman lu->id.job = JOB_INIT; 473397b6df1SKris Buschelman ierr = MPI_Comm_dup(A->comm,&(lu->comm_mumps));CHKERRQ(ierr); 474397b6df1SKris Buschelman lu->id.comm_fortran = lu->comm_mumps; 475397b6df1SKris Buschelman 476397b6df1SKris Buschelman /* Set mumps options */ 477397b6df1SKris Buschelman ierr = PetscOptionsBegin(A->comm,A->prefix,"MUMPS Options","Mat");CHKERRQ(ierr); 478397b6df1SKris Buschelman lu->id.par=1; /* host participates factorizaton and solve */ 479397b6df1SKris Buschelman lu->id.sym=lu->sym; 480397b6df1SKris Buschelman if (lu->sym == 2){ 481397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_sym","SYM: (1,2)","None",lu->id.sym,&icntl,&flg);CHKERRQ(ierr); 482397b6df1SKris Buschelman if (flg && icntl == 1) lu->id.sym=icntl; /* matrix is spd */ 483397b6df1SKris Buschelman } 484397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 485397b6df1SKris Buschelman zmumps_c(&lu->id); 486397b6df1SKris Buschelman #else 487397b6df1SKris Buschelman dmumps_c(&lu->id); 488397b6df1SKris Buschelman #endif 489397b6df1SKris Buschelman 490397b6df1SKris Buschelman if (lu->size == 1){ 491397b6df1SKris Buschelman lu->id.ICNTL(18) = 0; /* centralized assembled matrix input */ 492397b6df1SKris Buschelman } else { 493397b6df1SKris Buschelman lu->id.ICNTL(18) = 3; /* distributed assembled matrix input */ 494397b6df1SKris Buschelman } 495397b6df1SKris Buschelman 496397b6df1SKris Buschelman icntl=-1; 497397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_4","ICNTL(4): level of printing (0 to 4)","None",lu->id.ICNTL(4),&icntl,&flg);CHKERRQ(ierr); 49819facb7aSBarry Smith if ((flg && icntl > 0) || PetscLogPrintInfo) { 499397b6df1SKris Buschelman lu->id.ICNTL(4)=icntl; /* and use mumps default icntl(i), i=1,2,3 */ 500397b6df1SKris Buschelman } else { /* no output */ 501397b6df1SKris Buschelman lu->id.ICNTL(1) = 0; /* error message, default= 6 */ 502397b6df1SKris Buschelman lu->id.ICNTL(2) = -1; /* output stream for diagnostic printing, statistics, and warning. default=0 */ 503397b6df1SKris Buschelman lu->id.ICNTL(3) = -1; /* output stream for global information, default=6 */ 504397b6df1SKris Buschelman lu->id.ICNTL(4) = 0; /* level of printing, 0,1,2,3,4, default=2 */ 505397b6df1SKris Buschelman } 506397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_6","ICNTL(6): matrix prescaling (0 to 7)","None",lu->id.ICNTL(6),&lu->id.ICNTL(6),PETSC_NULL);CHKERRQ(ierr); 507397b6df1SKris Buschelman icntl=-1; 508397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_7","ICNTL(7): matrix ordering (0 to 7)","None",lu->id.ICNTL(7),&icntl,&flg);CHKERRQ(ierr); 509397b6df1SKris Buschelman if (flg) { 510397b6df1SKris Buschelman if (icntl== 1){ 511397b6df1SKris Buschelman SETERRQ(PETSC_ERR_SUP,"pivot order be set by the user in PERM_IN -- not supported by the PETSc/MUMPS interface\n"); 512397b6df1SKris Buschelman } else { 513397b6df1SKris Buschelman lu->id.ICNTL(7) = icntl; 514397b6df1SKris Buschelman } 515397b6df1SKris Buschelman } 516397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_9","ICNTL(9): A or A^T x=b to be solved. 1: A; otherwise: A^T","None",lu->id.ICNTL(9),&lu->id.ICNTL(9),PETSC_NULL);CHKERRQ(ierr); 517397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_10","ICNTL(10): max num of refinements","None",lu->id.ICNTL(10),&lu->id.ICNTL(10),PETSC_NULL);CHKERRQ(ierr); 51894b7f48cSBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_11","ICNTL(11): error analysis, a positive value returns statistics (by -ksp_view)","None",lu->id.ICNTL(11),&lu->id.ICNTL(11),PETSC_NULL);CHKERRQ(ierr); 519397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_12","ICNTL(12): efficiency control","None",lu->id.ICNTL(12),&lu->id.ICNTL(12),PETSC_NULL);CHKERRQ(ierr); 520397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_13","ICNTL(13): efficiency control","None",lu->id.ICNTL(13),&lu->id.ICNTL(13),PETSC_NULL);CHKERRQ(ierr); 521adc1d99fSHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_14","ICNTL(14): percentage of estimated workspace increase","None",lu->id.ICNTL(14),&lu->id.ICNTL(14),PETSC_NULL);CHKERRQ(ierr); 522397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_15","ICNTL(15): efficiency control","None",lu->id.ICNTL(15),&lu->id.ICNTL(15),PETSC_NULL);CHKERRQ(ierr); 523397b6df1SKris Buschelman 524397b6df1SKris Buschelman /* 525397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_16","ICNTL(16): 1: rank detection; 2: rank detection and nullspace","None",lu->id.ICNTL(16),&icntl,&flg);CHKERRQ(ierr); 526397b6df1SKris Buschelman if (flg){ 527397b6df1SKris Buschelman if (icntl >-1 && icntl <3 ){ 528397b6df1SKris Buschelman if (lu->myid==0) lu->id.ICNTL(16) = icntl; 529397b6df1SKris Buschelman } else { 530397b6df1SKris Buschelman SETERRQ1(PETSC_ERR_SUP,"ICNTL(16)=%d -- not supported\n",icntl); 531397b6df1SKris Buschelman } 532397b6df1SKris Buschelman } 533397b6df1SKris Buschelman */ 534397b6df1SKris Buschelman 535397b6df1SKris Buschelman ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",lu->id.CNTL(1),&lu->id.CNTL(1),PETSC_NULL);CHKERRQ(ierr); 536397b6df1SKris Buschelman ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",lu->id.CNTL(2),&lu->id.CNTL(2),PETSC_NULL);CHKERRQ(ierr); 537397b6df1SKris Buschelman ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",lu->id.CNTL(3),&lu->id.CNTL(3),PETSC_NULL);CHKERRQ(ierr); 538397b6df1SKris Buschelman PetscOptionsEnd(); 539397b6df1SKris Buschelman } 540397b6df1SKris Buschelman 541397b6df1SKris Buschelman /* define matrix A */ 542397b6df1SKris Buschelman switch (lu->id.ICNTL(18)){ 543397b6df1SKris Buschelman case 0: /* centralized assembled matrix input (size=1) */ 544397b6df1SKris Buschelman if (!lu->myid) { 545c36ead0aSKris Buschelman if (lua->isAIJ){ 546397b6df1SKris Buschelman Mat_SeqAIJ *aa = (Mat_SeqAIJ*)A->data; 547397b6df1SKris Buschelman nz = aa->nz; 548397b6df1SKris Buschelman ai = aa->i; aj = aa->j; lu->val = aa->a; 549397b6df1SKris Buschelman } else { 550397b6df1SKris Buschelman Mat_SeqSBAIJ *aa = (Mat_SeqSBAIJ*)A->data; 5516c6c5352SBarry Smith nz = aa->nz; 552397b6df1SKris Buschelman ai = aa->i; aj = aa->j; lu->val = aa->a; 553397b6df1SKris Buschelman } 554397b6df1SKris Buschelman if (lu->matstruc == DIFFERENT_NONZERO_PATTERN){ /* first numeric factorization, get irn and jcn */ 555397b6df1SKris Buschelman ierr = PetscMalloc(nz*sizeof(int),&lu->irn);CHKERRQ(ierr); 556397b6df1SKris Buschelman ierr = PetscMalloc(nz*sizeof(int),&lu->jcn);CHKERRQ(ierr); 557397b6df1SKris Buschelman nz = 0; 558397b6df1SKris Buschelman for (i=0; i<M; i++){ 559397b6df1SKris Buschelman rnz = ai[i+1] - ai[i]; 560397b6df1SKris Buschelman while (rnz--) { /* Fortran row/col index! */ 561397b6df1SKris Buschelman lu->irn[nz] = i+1; lu->jcn[nz] = (*aj)+1; aj++; nz++; 562397b6df1SKris Buschelman } 563397b6df1SKris Buschelman } 564397b6df1SKris Buschelman } 565397b6df1SKris Buschelman } 566397b6df1SKris Buschelman break; 567397b6df1SKris Buschelman case 3: /* distributed assembled matrix input (size>1) */ 568397b6df1SKris Buschelman if (lu->matstruc == DIFFERENT_NONZERO_PATTERN){ 569397b6df1SKris Buschelman valOnly = PETSC_FALSE; 570397b6df1SKris Buschelman } else { 571397b6df1SKris Buschelman valOnly = PETSC_TRUE; /* only update mat values, not row and col index */ 572397b6df1SKris Buschelman } 573397b6df1SKris Buschelman ierr = MatConvertToTriples(A,1,valOnly, &nnz, &lu->irn, &lu->jcn, &lu->val);CHKERRQ(ierr); 574397b6df1SKris Buschelman break; 575397b6df1SKris Buschelman default: SETERRQ(PETSC_ERR_SUP,"Matrix input format is not supported by MUMPS."); 576397b6df1SKris Buschelman } 577397b6df1SKris Buschelman 578397b6df1SKris Buschelman /* analysis phase */ 579397b6df1SKris Buschelman if (lu->matstruc == DIFFERENT_NONZERO_PATTERN){ 580397b6df1SKris Buschelman lu->id.n = M; 581397b6df1SKris Buschelman switch (lu->id.ICNTL(18)){ 582397b6df1SKris Buschelman case 0: /* centralized assembled matrix input */ 583397b6df1SKris Buschelman if (!lu->myid) { 584397b6df1SKris Buschelman lu->id.nz =nz; lu->id.irn=lu->irn; lu->id.jcn=lu->jcn; 585397b6df1SKris Buschelman if (lu->id.ICNTL(6)>1){ 586397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 587397b6df1SKris Buschelman lu->id.a = (mumps_double_complex*)lu->val; 588397b6df1SKris Buschelman #else 589397b6df1SKris Buschelman lu->id.a = lu->val; 590397b6df1SKris Buschelman #endif 591397b6df1SKris Buschelman } 592397b6df1SKris Buschelman } 593397b6df1SKris Buschelman break; 594397b6df1SKris Buschelman case 3: /* distributed assembled matrix input (size>1) */ 595397b6df1SKris Buschelman lu->id.nz_loc = nnz; 596397b6df1SKris Buschelman lu->id.irn_loc=lu->irn; lu->id.jcn_loc=lu->jcn; 597397b6df1SKris Buschelman if (lu->id.ICNTL(6)>1) { 598397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 599397b6df1SKris Buschelman lu->id.a_loc = (mumps_double_complex*)lu->val; 600397b6df1SKris Buschelman #else 601397b6df1SKris Buschelman lu->id.a_loc = lu->val; 602397b6df1SKris Buschelman #endif 603397b6df1SKris Buschelman } 604397b6df1SKris Buschelman break; 605397b6df1SKris Buschelman } 606397b6df1SKris Buschelman lu->id.job=1; 607397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 608397b6df1SKris Buschelman zmumps_c(&lu->id); 609397b6df1SKris Buschelman #else 610397b6df1SKris Buschelman dmumps_c(&lu->id); 611397b6df1SKris Buschelman #endif 612397b6df1SKris Buschelman if (lu->id.INFOG(1) < 0) { 61379a5c55eSBarry Smith SETERRQ1(PETSC_ERR_LIB,"Error reported by MUMPS in analysis phase: INFOG(1)=%d\n",lu->id.INFOG(1)); 614397b6df1SKris Buschelman } 615397b6df1SKris Buschelman } 616397b6df1SKris Buschelman 617397b6df1SKris Buschelman /* numerical factorization phase */ 618958c9bccSBarry Smith if(!lu->id.ICNTL(18)) { 619a7aca84bSHong Zhang if (!lu->myid) { 620397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 621397b6df1SKris Buschelman lu->id.a = (mumps_double_complex*)lu->val; 622397b6df1SKris Buschelman #else 623397b6df1SKris Buschelman lu->id.a = lu->val; 624397b6df1SKris Buschelman #endif 625397b6df1SKris Buschelman } 626397b6df1SKris Buschelman } else { 627397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 628397b6df1SKris Buschelman lu->id.a_loc = (mumps_double_complex*)lu->val; 629397b6df1SKris Buschelman #else 630397b6df1SKris Buschelman lu->id.a_loc = lu->val; 631397b6df1SKris Buschelman #endif 632397b6df1SKris Buschelman } 633397b6df1SKris Buschelman lu->id.job=2; 634397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 635397b6df1SKris Buschelman zmumps_c(&lu->id); 636397b6df1SKris Buschelman #else 637397b6df1SKris Buschelman dmumps_c(&lu->id); 638397b6df1SKris Buschelman #endif 639397b6df1SKris Buschelman if (lu->id.INFOG(1) < 0) { 64019facb7aSBarry Smith if (lu->id.INFO(1) == -13) { 64119facb7aSBarry Smith SETERRQ1(PETSC_ERR_LIB,"Error reported by MUMPS in numerical factorization phase: Cannot allocate required memory %d megabytes\n",lu->id.INFO(2)); 64219facb7aSBarry Smith } else { 64379a5c55eSBarry Smith SETERRQ2(PETSC_ERR_LIB,"Error reported by MUMPS in numerical factorization phase: INFO(1)=%d, INFO(2)=%d\n",lu->id.INFO(1),lu->id.INFO(2)); 644397b6df1SKris Buschelman } 64519facb7aSBarry Smith } 646397b6df1SKris Buschelman 64719facb7aSBarry Smith if (!lu->myid && lu->id.ICNTL(16) > 0){ 64879a5c55eSBarry Smith SETERRQ1(PETSC_ERR_LIB," lu->id.ICNTL(16):=%d\n",lu->id.INFOG(16)); 649397b6df1SKris Buschelman } 650397b6df1SKris Buschelman 651397b6df1SKris Buschelman (*F)->assembled = PETSC_TRUE; 652397b6df1SKris Buschelman lu->matstruc = SAME_NONZERO_PATTERN; 653ace87b0dSHong Zhang lu->CleanUpMUMPS = PETSC_TRUE; 654397b6df1SKris Buschelman PetscFunctionReturn(0); 655397b6df1SKris Buschelman } 656397b6df1SKris Buschelman 657397b6df1SKris Buschelman /* Note the Petsc r and c permutations are ignored */ 658397b6df1SKris Buschelman #undef __FUNCT__ 659f0c56d0fSKris Buschelman #define __FUNCT__ "MatLUFactorSymbolic_AIJMUMPS" 660dfbe8321SBarry Smith PetscErrorCode MatLUFactorSymbolic_AIJMUMPS(Mat A,IS r,IS c,MatFactorInfo *info,Mat *F) { 661397b6df1SKris Buschelman Mat B; 662f0c56d0fSKris Buschelman Mat_MUMPS *lu; 663dfbe8321SBarry Smith PetscErrorCode ierr; 664397b6df1SKris Buschelman 665397b6df1SKris Buschelman PetscFunctionBegin; 666397b6df1SKris Buschelman 667397b6df1SKris Buschelman /* Create the factorization matrix */ 668397b6df1SKris Buschelman ierr = MatCreate(A->comm,A->m,A->n,A->M,A->N,&B);CHKERRQ(ierr); 669be5d1d56SKris Buschelman ierr = MatSetType(B,A->type_name);CHKERRQ(ierr); 670397b6df1SKris Buschelman ierr = MatSeqAIJSetPreallocation(B,0,PETSC_NULL);CHKERRQ(ierr); 671397b6df1SKris Buschelman ierr = MatMPIAIJSetPreallocation(B,0,PETSC_NULL,0,PETSC_NULL);CHKERRQ(ierr); 672397b6df1SKris Buschelman 673f0c56d0fSKris Buschelman B->ops->lufactornumeric = MatFactorNumeric_AIJMUMPS; 674397b6df1SKris Buschelman B->factor = FACTOR_LU; 675f0c56d0fSKris Buschelman lu = (Mat_MUMPS*)B->spptr; 676397b6df1SKris Buschelman lu->sym = 0; 677397b6df1SKris Buschelman lu->matstruc = DIFFERENT_NONZERO_PATTERN; 678397b6df1SKris Buschelman 679397b6df1SKris Buschelman *F = B; 680397b6df1SKris Buschelman PetscFunctionReturn(0); 681397b6df1SKris Buschelman } 682397b6df1SKris Buschelman 683397b6df1SKris Buschelman /* Note the Petsc r permutation is ignored */ 684397b6df1SKris Buschelman #undef __FUNCT__ 685f0c56d0fSKris Buschelman #define __FUNCT__ "MatCholeskyFactorSymbolic_SBAIJMUMPS" 686dfbe8321SBarry Smith PetscErrorCode MatCholeskyFactorSymbolic_SBAIJMUMPS(Mat A,IS r,MatFactorInfo *info,Mat *F) { 687397b6df1SKris Buschelman Mat B; 688f0c56d0fSKris Buschelman Mat_MUMPS *lu; 689dfbe8321SBarry Smith PetscErrorCode ierr; 690397b6df1SKris Buschelman 691397b6df1SKris Buschelman PetscFunctionBegin; 692397b6df1SKris Buschelman /* Create the factorization matrix */ 693397b6df1SKris Buschelman ierr = MatCreate(A->comm,A->m,A->n,A->M,A->N,&B);CHKERRQ(ierr); 694be5d1d56SKris Buschelman ierr = MatSetType(B,A->type_name);CHKERRQ(ierr); 695efc670deSHong Zhang ierr = MatSeqSBAIJSetPreallocation(B,1,0,PETSC_NULL);CHKERRQ(ierr); 696efc670deSHong Zhang ierr = MatMPISBAIJSetPreallocation(B,1,0,PETSC_NULL,0,PETSC_NULL);CHKERRQ(ierr); 697397b6df1SKris Buschelman 698f0c56d0fSKris Buschelman B->ops->choleskyfactornumeric = MatFactorNumeric_AIJMUMPS; 699a58c3f20SHong Zhang B->ops->getinertia = MatGetInertia_SBAIJMUMPS; 700397b6df1SKris Buschelman B->factor = FACTOR_CHOLESKY; 701f0c56d0fSKris Buschelman lu = (Mat_MUMPS*)B->spptr; 702397b6df1SKris Buschelman lu->sym = 2; 703397b6df1SKris Buschelman lu->matstruc = DIFFERENT_NONZERO_PATTERN; 704397b6df1SKris Buschelman 705397b6df1SKris Buschelman *F = B; 706397b6df1SKris Buschelman PetscFunctionReturn(0); 707397b6df1SKris Buschelman } 708397b6df1SKris Buschelman 709397b6df1SKris Buschelman #undef __FUNCT__ 710f0c56d0fSKris Buschelman #define __FUNCT__ "MatAssemblyEnd_AIJMUMPS" 711dfbe8321SBarry Smith PetscErrorCode MatAssemblyEnd_AIJMUMPS(Mat A,MatAssemblyType mode) { 712dfbe8321SBarry Smith PetscErrorCode ierr; 713f0c56d0fSKris Buschelman Mat_MUMPS *mumps=(Mat_MUMPS*)A->spptr; 714c338a77dSKris Buschelman 715397b6df1SKris Buschelman PetscFunctionBegin; 716c338a77dSKris Buschelman ierr = (*mumps->MatAssemblyEnd)(A,mode);CHKERRQ(ierr); 717f0c56d0fSKris Buschelman 718c338a77dSKris Buschelman mumps->MatLUFactorSymbolic = A->ops->lufactorsymbolic; 719c338a77dSKris Buschelman mumps->MatCholeskyFactorSymbolic = A->ops->choleskyfactorsymbolic; 720f0c56d0fSKris Buschelman A->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 721397b6df1SKris Buschelman PetscFunctionReturn(0); 722397b6df1SKris Buschelman } 723397b6df1SKris Buschelman 724c338a77dSKris Buschelman EXTERN_C_BEGIN 725c338a77dSKris Buschelman #undef __FUNCT__ 726f0c56d0fSKris Buschelman #define __FUNCT__ "MatConvert_AIJ_AIJMUMPS" 727521d7252SBarry Smith PetscErrorCode MatConvert_AIJ_AIJMUMPS(Mat A,const MatType newtype,Mat *newmat) 728dfbe8321SBarry Smith { 729dfbe8321SBarry Smith PetscErrorCode ierr; 730521d7252SBarry Smith PetscMPIInt size; 731c338a77dSKris Buschelman MPI_Comm comm; 732c338a77dSKris Buschelman Mat B=*newmat; 733f0c56d0fSKris Buschelman Mat_MUMPS *mumps; 734397b6df1SKris Buschelman 735397b6df1SKris Buschelman PetscFunctionBegin; 736c338a77dSKris Buschelman if (B != A) { 737c338a77dSKris Buschelman ierr = MatDuplicate(A,MAT_COPY_VALUES,&B);CHKERRQ(ierr); 738397b6df1SKris Buschelman } 739397b6df1SKris Buschelman 740c338a77dSKris Buschelman ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr); 741f0c56d0fSKris Buschelman ierr = PetscNew(Mat_MUMPS,&mumps);CHKERRQ(ierr); 742c338a77dSKris Buschelman 743f0c56d0fSKris Buschelman mumps->MatDuplicate = A->ops->duplicate; 744c338a77dSKris Buschelman mumps->MatView = A->ops->view; 745c338a77dSKris Buschelman mumps->MatAssemblyEnd = A->ops->assemblyend; 746c338a77dSKris Buschelman mumps->MatLUFactorSymbolic = A->ops->lufactorsymbolic; 747c338a77dSKris Buschelman mumps->MatCholeskyFactorSymbolic = A->ops->choleskyfactorsymbolic; 748c338a77dSKris Buschelman mumps->MatDestroy = A->ops->destroy; 749a39386dcSKris Buschelman mumps->specialdestroy = MatDestroy_AIJMUMPS; 750c338a77dSKris Buschelman mumps->CleanUpMUMPS = PETSC_FALSE; 751f579278aSKris Buschelman mumps->isAIJ = PETSC_TRUE; 752c338a77dSKris Buschelman 7534b68dd72SKris Buschelman B->spptr = (void*)mumps; 754422e82a1SHong Zhang B->ops->duplicate = MatDuplicate_MUMPS; 755f0c56d0fSKris Buschelman B->ops->view = MatView_AIJMUMPS; 756f0c56d0fSKris Buschelman B->ops->assemblyend = MatAssemblyEnd_AIJMUMPS; 757f0c56d0fSKris Buschelman B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 7583924e44cSKris Buschelman B->ops->destroy = MatDestroy_MUMPS; 759c338a77dSKris Buschelman 760c338a77dSKris Buschelman ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);CHKERRQ(ierr); 761c338a77dSKris Buschelman if (size == 1) { 762c338a77dSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_seqaij_aijmumps_C", 763f0c56d0fSKris Buschelman "MatConvert_AIJ_AIJMUMPS",MatConvert_AIJ_AIJMUMPS);CHKERRQ(ierr); 764c338a77dSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_aijmumps_seqaij_C", 765c338a77dSKris Buschelman "MatConvert_MUMPS_Base",MatConvert_MUMPS_Base);CHKERRQ(ierr); 766c338a77dSKris Buschelman } else { 767c338a77dSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_mpiaij_aijmumps_C", 768f0c56d0fSKris Buschelman "MatConvert_AIJ_AIJMUMPS",MatConvert_AIJ_AIJMUMPS);CHKERRQ(ierr); 769c338a77dSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_aijmumps_mpiaij_C", 770c338a77dSKris Buschelman "MatConvert_MUMPS_Base",MatConvert_MUMPS_Base);CHKERRQ(ierr); 771c338a77dSKris Buschelman } 772c338a77dSKris Buschelman 773*52e6d16bSBarry Smith PetscLogInfo(0,"MatConvert_AIJ_AIJMUMPS:Using MUMPS for LU factorization and solves."); 774c338a77dSKris Buschelman ierr = PetscObjectChangeTypeName((PetscObject)B,newtype);CHKERRQ(ierr); 775c338a77dSKris Buschelman *newmat = B; 776397b6df1SKris Buschelman PetscFunctionReturn(0); 777397b6df1SKris Buschelman } 778c338a77dSKris Buschelman EXTERN_C_END 779397b6df1SKris Buschelman 78024b6179bSKris Buschelman /*MC 781fafad747SKris Buschelman MATAIJMUMPS - MATAIJMUMPS = "aijmumps" - A matrix type providing direct solvers (LU) for distributed 78224b6179bSKris Buschelman and sequential matrices via the external package MUMPS. 78324b6179bSKris Buschelman 78424b6179bSKris Buschelman If MUMPS is installed (see the manual for instructions 78524b6179bSKris Buschelman on how to declare the existence of external packages), 78624b6179bSKris Buschelman a matrix type can be constructed which invokes MUMPS solvers. 78724b6179bSKris Buschelman After calling MatCreate(...,A), simply call MatSetType(A,MATAIJMUMPS). 78824b6179bSKris Buschelman 78924b6179bSKris Buschelman If created with a single process communicator, this matrix type inherits from MATSEQAIJ. 79024b6179bSKris Buschelman Otherwise, this matrix type inherits from MATMPIAIJ. Hence for single process communicators, 79124b6179bSKris Buschelman MatSeqAIJSetPreallocation is supported, and similarly MatMPIAIJSetPreallocation is supported 79224b6179bSKris Buschelman for communicators controlling multiple processes. It is recommended that you call both of 79328b08bd3SKris Buschelman the above preallocation routines for simplicity. One can also call MatConvert for an inplace 79428b08bd3SKris Buschelman conversion to or from the MATSEQAIJ or MATMPIAIJ type (depending on the communicator size) 79528b08bd3SKris Buschelman without data copy. 79624b6179bSKris Buschelman 79724b6179bSKris Buschelman Options Database Keys: 7980bad9183SKris Buschelman + -mat_type aijmumps - sets the matrix type to "aijmumps" during a call to MatSetFromOptions() 79924b6179bSKris Buschelman . -mat_mumps_sym <0,1,2> - 0 the matrix is unsymmetric, 1 symmetric positive definite, 2 symmetric 80024b6179bSKris Buschelman . -mat_mumps_icntl_4 <0,1,2,3,4> - print level 80124b6179bSKris Buschelman . -mat_mumps_icntl_6 <0,...,7> - matrix prescaling options (see MUMPS User's Guide) 80224b6179bSKris Buschelman . -mat_mumps_icntl_7 <0,...,7> - matrix orderings (see MUMPS User's Guide) 80324b6179bSKris Buschelman . -mat_mumps_icntl_9 <1,2> - A or A^T x=b to be solved: 1 denotes A, 2 denotes A^T 80424b6179bSKris Buschelman . -mat_mumps_icntl_10 <n> - maximum number of iterative refinements 80594b7f48cSBarry Smith . -mat_mumps_icntl_11 <n> - error analysis, a positive value returns statistics during -ksp_view 80624b6179bSKris Buschelman . -mat_mumps_icntl_12 <n> - efficiency control (see MUMPS User's Guide) 80724b6179bSKris Buschelman . -mat_mumps_icntl_13 <n> - efficiency control (see MUMPS User's Guide) 80824b6179bSKris Buschelman . -mat_mumps_icntl_14 <n> - efficiency control (see MUMPS User's Guide) 80924b6179bSKris Buschelman . -mat_mumps_icntl_15 <n> - efficiency control (see MUMPS User's Guide) 81024b6179bSKris Buschelman . -mat_mumps_cntl_1 <delta> - relative pivoting threshold 81124b6179bSKris Buschelman . -mat_mumps_cntl_2 <tol> - stopping criterion for refinement 81224b6179bSKris Buschelman - -mat_mumps_cntl_3 <adelta> - absolute pivoting threshold 81324b6179bSKris Buschelman 81424b6179bSKris Buschelman Level: beginner 81524b6179bSKris Buschelman 81624b6179bSKris Buschelman .seealso: MATSBAIJMUMPS 81724b6179bSKris Buschelman M*/ 81824b6179bSKris Buschelman 819397b6df1SKris Buschelman EXTERN_C_BEGIN 820397b6df1SKris Buschelman #undef __FUNCT__ 821f0c56d0fSKris Buschelman #define __FUNCT__ "MatCreate_AIJMUMPS" 822dfbe8321SBarry Smith PetscErrorCode MatCreate_AIJMUMPS(Mat A) 823dfbe8321SBarry Smith { 824dfbe8321SBarry Smith PetscErrorCode ierr; 825dfbe8321SBarry Smith int size; 826e2d9671bSKris Buschelman Mat A_diag; 827397b6df1SKris Buschelman MPI_Comm comm; 828397b6df1SKris Buschelman 829397b6df1SKris Buschelman PetscFunctionBegin; 8305441df8eSKris Buschelman /* Change type name before calling MatSetType to force proper construction of SeqAIJ or MPIAIJ */ 8315441df8eSKris Buschelman /* and AIJMUMPS types */ 8325441df8eSKris Buschelman ierr = PetscObjectChangeTypeName((PetscObject)A,MATAIJMUMPS);CHKERRQ(ierr); 833397b6df1SKris Buschelman ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr); 834397b6df1SKris Buschelman ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);CHKERRQ(ierr); 835397b6df1SKris Buschelman if (size == 1) { 836397b6df1SKris Buschelman ierr = MatSetType(A,MATSEQAIJ);CHKERRQ(ierr); 837397b6df1SKris Buschelman } else { 838397b6df1SKris Buschelman ierr = MatSetType(A,MATMPIAIJ);CHKERRQ(ierr); 839e2d9671bSKris Buschelman A_diag = ((Mat_MPIAIJ *)A->data)->A; 840e2d9671bSKris Buschelman ierr = MatConvert_AIJ_AIJMUMPS(A_diag,MATAIJMUMPS,&A_diag);CHKERRQ(ierr); 841397b6df1SKris Buschelman } 842f0c56d0fSKris Buschelman ierr = MatConvert_AIJ_AIJMUMPS(A,MATAIJMUMPS,&A);CHKERRQ(ierr); 843397b6df1SKris Buschelman PetscFunctionReturn(0); 844397b6df1SKris Buschelman } 845397b6df1SKris Buschelman EXTERN_C_END 846397b6df1SKris Buschelman 847f579278aSKris Buschelman #undef __FUNCT__ 848f0c56d0fSKris Buschelman #define __FUNCT__ "MatAssemblyEnd_SBAIJMUMPS" 849dfbe8321SBarry Smith PetscErrorCode MatAssemblyEnd_SBAIJMUMPS(Mat A,MatAssemblyType mode) 850dfbe8321SBarry Smith { 851dfbe8321SBarry Smith PetscErrorCode ierr; 852f0c56d0fSKris Buschelman Mat_MUMPS *mumps=(Mat_MUMPS*)A->spptr; 853f579278aSKris Buschelman 854f579278aSKris Buschelman PetscFunctionBegin; 855f579278aSKris Buschelman ierr = (*mumps->MatAssemblyEnd)(A,mode);CHKERRQ(ierr); 856f579278aSKris Buschelman mumps->MatLUFactorSymbolic = A->ops->lufactorsymbolic; 857f579278aSKris Buschelman mumps->MatCholeskyFactorSymbolic = A->ops->choleskyfactorsymbolic; 858f0c56d0fSKris Buschelman A->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SBAIJMUMPS; 859f579278aSKris Buschelman PetscFunctionReturn(0); 860f579278aSKris Buschelman } 861f579278aSKris Buschelman 862f579278aSKris Buschelman EXTERN_C_BEGIN 863f579278aSKris Buschelman #undef __FUNCT__ 8649c097c71SKris Buschelman #define __FUNCT__ "MatMPISBAIJSetPreallocation_MPISBAIJMUMPS" 865dfbe8321SBarry Smith PetscErrorCode MatMPISBAIJSetPreallocation_MPISBAIJMUMPS(Mat B,int bs,int d_nz,int *d_nnz,int o_nz,int *o_nnz) 8669c097c71SKris Buschelman { 8679c097c71SKris Buschelman Mat A; 86802217bfdSHong Zhang Mat_MUMPS *mumps=(Mat_MUMPS*)B->spptr; 869dfbe8321SBarry Smith PetscErrorCode ierr; 8709c097c71SKris Buschelman 8719c097c71SKris Buschelman PetscFunctionBegin; 8729c097c71SKris Buschelman /* 8739c097c71SKris Buschelman After performing the MPISBAIJ Preallocation, we need to convert the local diagonal block matrix 8749c097c71SKris Buschelman into MUMPS type so that the block jacobi preconditioner (for example) can use MUMPS. I would 8759c097c71SKris Buschelman like this to be done in the MatCreate routine, but the creation of this inner matrix requires 8769c097c71SKris Buschelman block size info so that PETSc can determine the local size properly. The block size info is set 8779c097c71SKris Buschelman in the preallocation routine. 8789c097c71SKris Buschelman */ 8799c097c71SKris Buschelman ierr = (*mumps->MatPreallocate)(B,bs,d_nz,d_nnz,o_nz,o_nnz); 8809c097c71SKris Buschelman A = ((Mat_MPISBAIJ *)B->data)->A; 8819c097c71SKris Buschelman ierr = MatConvert_SBAIJ_SBAIJMUMPS(A,MATSBAIJMUMPS,&A);CHKERRQ(ierr); 8829c097c71SKris Buschelman PetscFunctionReturn(0); 8839c097c71SKris Buschelman } 8849c097c71SKris Buschelman EXTERN_C_END 8859c097c71SKris Buschelman 8869c097c71SKris Buschelman EXTERN_C_BEGIN 8879c097c71SKris Buschelman #undef __FUNCT__ 888f0c56d0fSKris Buschelman #define __FUNCT__ "MatConvert_SBAIJ_SBAIJMUMPS" 889dfbe8321SBarry Smith PetscErrorCode MatConvert_SBAIJ_SBAIJMUMPS(Mat A,const MatType newtype,Mat *newmat) 890dfbe8321SBarry Smith { 891dfbe8321SBarry Smith PetscErrorCode ierr; 892521d7252SBarry Smith PetscMPIInt size; 893f579278aSKris Buschelman MPI_Comm comm; 894f579278aSKris Buschelman Mat B=*newmat; 895422e82a1SHong Zhang Mat_MUMPS *mumps; 8969c097c71SKris Buschelman void (*f)(void); 897f579278aSKris Buschelman 898f579278aSKris Buschelman PetscFunctionBegin; 899f579278aSKris Buschelman if (B != A) { 900f579278aSKris Buschelman ierr = MatDuplicate(A,MAT_COPY_VALUES,&B);CHKERRQ(ierr); 901f579278aSKris Buschelman } 902f579278aSKris Buschelman 903f579278aSKris Buschelman ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr); 904f0c56d0fSKris Buschelman ierr = PetscNew(Mat_MUMPS,&mumps);CHKERRQ(ierr); 905f579278aSKris Buschelman 906f0c56d0fSKris Buschelman mumps->MatDuplicate = A->ops->duplicate; 907f579278aSKris Buschelman mumps->MatView = A->ops->view; 908f579278aSKris Buschelman mumps->MatAssemblyEnd = A->ops->assemblyend; 909f579278aSKris Buschelman mumps->MatLUFactorSymbolic = A->ops->lufactorsymbolic; 910f579278aSKris Buschelman mumps->MatCholeskyFactorSymbolic = A->ops->choleskyfactorsymbolic; 911f579278aSKris Buschelman mumps->MatDestroy = A->ops->destroy; 912a39386dcSKris Buschelman mumps->specialdestroy = MatDestroy_SBAIJMUMPS; 913f579278aSKris Buschelman mumps->CleanUpMUMPS = PETSC_FALSE; 914f579278aSKris Buschelman mumps->isAIJ = PETSC_FALSE; 915f579278aSKris Buschelman 916f579278aSKris Buschelman B->spptr = (void*)mumps; 917422e82a1SHong Zhang B->ops->duplicate = MatDuplicate_MUMPS; 918f0c56d0fSKris Buschelman B->ops->view = MatView_AIJMUMPS; 919f0c56d0fSKris Buschelman B->ops->assemblyend = MatAssemblyEnd_SBAIJMUMPS; 920f0c56d0fSKris Buschelman B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SBAIJMUMPS; 9213924e44cSKris Buschelman B->ops->destroy = MatDestroy_MUMPS; 922f579278aSKris Buschelman 923f579278aSKris Buschelman ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);CHKERRQ(ierr); 924f579278aSKris Buschelman if (size == 1) { 925f0c56d0fSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_seqsbaij_sbaijmumps_C", 926f0c56d0fSKris Buschelman "MatConvert_SBAIJ_SBAIJMUMPS",MatConvert_SBAIJ_SBAIJMUMPS);CHKERRQ(ierr); 927f0c56d0fSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_sbaijmumps_seqsbaij_C", 928f579278aSKris Buschelman "MatConvert_MUMPS_Base",MatConvert_MUMPS_Base);CHKERRQ(ierr); 929f579278aSKris Buschelman } else { 9309c097c71SKris Buschelman /* I really don't like needing to know the tag: MatMPISBAIJSetPreallocation_C */ 9319c097c71SKris Buschelman ierr = PetscObjectQueryFunction((PetscObject)B,"MatMPISBAIJSetPreallocation_C",&f);CHKERRQ(ierr); 932901853e0SKris Buschelman if (f) { /* This case should always be true when this routine is called */ 9336849ba73SBarry Smith mumps->MatPreallocate = (PetscErrorCode (*)(Mat,int,int,int*,int,int*))f; 9349c097c71SKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatMPISBAIJSetPreallocation_C", 9359c097c71SKris Buschelman "MatMPISBAIJSetPreallocation_MPISBAIJMUMPS", 9369c097c71SKris Buschelman MatMPISBAIJSetPreallocation_MPISBAIJMUMPS);CHKERRQ(ierr); 9379c097c71SKris Buschelman } 938f0c56d0fSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_mpisbaij_sbaijmumps_C", 939f0c56d0fSKris Buschelman "MatConvert_SBAIJ_SBAIJMUMPS",MatConvert_SBAIJ_SBAIJMUMPS);CHKERRQ(ierr); 940f0c56d0fSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_sbaijmumps_mpisbaij_C", 941f579278aSKris Buschelman "MatConvert_MUMPS_Base",MatConvert_MUMPS_Base);CHKERRQ(ierr); 942f579278aSKris Buschelman } 943f579278aSKris Buschelman 944*52e6d16bSBarry Smith PetscLogInfo(0,"MatConvert_AIJ_AIJMUMPS:Using MUMPS for Cholesky factorization and solves."); 945f579278aSKris Buschelman ierr = PetscObjectChangeTypeName((PetscObject)B,newtype);CHKERRQ(ierr); 946f579278aSKris Buschelman *newmat = B; 947f579278aSKris Buschelman PetscFunctionReturn(0); 948f579278aSKris Buschelman } 949f579278aSKris Buschelman EXTERN_C_END 950f579278aSKris Buschelman 951f0c56d0fSKris Buschelman #undef __FUNCT__ 952422e82a1SHong Zhang #define __FUNCT__ "MatDuplicate_MUMPS" 953dfbe8321SBarry Smith PetscErrorCode MatDuplicate_MUMPS(Mat A, MatDuplicateOption op, Mat *M) { 954dfbe8321SBarry Smith PetscErrorCode ierr; 9558e393735SKris Buschelman Mat_MUMPS *lu=(Mat_MUMPS *)A->spptr; 9568f340917SKris Buschelman 957f0c56d0fSKris Buschelman PetscFunctionBegin; 9588f340917SKris Buschelman ierr = (*lu->MatDuplicate)(A,op,M);CHKERRQ(ierr); 9598e393735SKris Buschelman ierr = PetscMemcpy((*M)->spptr,lu,sizeof(Mat_MUMPS));CHKERRQ(ierr); 960f0c56d0fSKris Buschelman PetscFunctionReturn(0); 961f0c56d0fSKris Buschelman } 962f0c56d0fSKris Buschelman 96324b6179bSKris Buschelman /*MC 964fafad747SKris Buschelman MATSBAIJMUMPS - MATSBAIJMUMPS = "sbaijmumps" - A symmetric matrix type providing direct solvers (Cholesky) for 96524b6179bSKris Buschelman distributed and sequential matrices via the external package MUMPS. 96624b6179bSKris Buschelman 96724b6179bSKris Buschelman If MUMPS is installed (see the manual for instructions 96824b6179bSKris Buschelman on how to declare the existence of external packages), 96924b6179bSKris Buschelman a matrix type can be constructed which invokes MUMPS solvers. 97024b6179bSKris Buschelman After calling MatCreate(...,A), simply call MatSetType(A,MATSBAIJMUMPS). 97124b6179bSKris Buschelman 97224b6179bSKris Buschelman If created with a single process communicator, this matrix type inherits from MATSEQSBAIJ. 97324b6179bSKris Buschelman Otherwise, this matrix type inherits from MATMPISBAIJ. Hence for single process communicators, 97424b6179bSKris Buschelman MatSeqSBAIJSetPreallocation is supported, and similarly MatMPISBAIJSetPreallocation is supported 97524b6179bSKris Buschelman for communicators controlling multiple processes. It is recommended that you call both of 97628b08bd3SKris Buschelman the above preallocation routines for simplicity. One can also call MatConvert for an inplace 97728b08bd3SKris Buschelman conversion to or from the MATSEQSBAIJ or MATMPISBAIJ type (depending on the communicator size) 97828b08bd3SKris Buschelman without data copy. 97924b6179bSKris Buschelman 98024b6179bSKris Buschelman Options Database Keys: 9810bad9183SKris Buschelman + -mat_type sbaijmumps - sets the matrix type to "sbaijmumps" during a call to MatSetFromOptions() 98224b6179bSKris Buschelman . -mat_mumps_sym <0,1,2> - 0 the matrix is unsymmetric, 1 symmetric positive definite, 2 symmetric 98324b6179bSKris Buschelman . -mat_mumps_icntl_4 <0,...,4> - print level 98424b6179bSKris Buschelman . -mat_mumps_icntl_6 <0,...,7> - matrix prescaling options (see MUMPS User's Guide) 98524b6179bSKris Buschelman . -mat_mumps_icntl_7 <0,...,7> - matrix orderings (see MUMPS User's Guide) 98624b6179bSKris Buschelman . -mat_mumps_icntl_9 <1,2> - A or A^T x=b to be solved: 1 denotes A, 2 denotes A^T 98724b6179bSKris Buschelman . -mat_mumps_icntl_10 <n> - maximum number of iterative refinements 98894b7f48cSBarry Smith . -mat_mumps_icntl_11 <n> - error analysis, a positive value returns statistics during -ksp_view 98924b6179bSKris Buschelman . -mat_mumps_icntl_12 <n> - efficiency control (see MUMPS User's Guide) 99024b6179bSKris Buschelman . -mat_mumps_icntl_13 <n> - efficiency control (see MUMPS User's Guide) 99124b6179bSKris Buschelman . -mat_mumps_icntl_14 <n> - efficiency control (see MUMPS User's Guide) 99224b6179bSKris Buschelman . -mat_mumps_icntl_15 <n> - efficiency control (see MUMPS User's Guide) 99324b6179bSKris Buschelman . -mat_mumps_cntl_1 <delta> - relative pivoting threshold 99424b6179bSKris Buschelman . -mat_mumps_cntl_2 <tol> - stopping criterion for refinement 99524b6179bSKris Buschelman - -mat_mumps_cntl_3 <adelta> - absolute pivoting threshold 99624b6179bSKris Buschelman 99724b6179bSKris Buschelman Level: beginner 99824b6179bSKris Buschelman 99924b6179bSKris Buschelman .seealso: MATAIJMUMPS 100024b6179bSKris Buschelman M*/ 100124b6179bSKris Buschelman 1002397b6df1SKris Buschelman EXTERN_C_BEGIN 1003397b6df1SKris Buschelman #undef __FUNCT__ 1004f0c56d0fSKris Buschelman #define __FUNCT__ "MatCreate_SBAIJMUMPS" 1005dfbe8321SBarry Smith PetscErrorCode MatCreate_SBAIJMUMPS(Mat A) 1006dfbe8321SBarry Smith { 10076849ba73SBarry Smith PetscErrorCode ierr; 10086849ba73SBarry Smith int size; 1009397b6df1SKris Buschelman 1010397b6df1SKris Buschelman PetscFunctionBegin; 10115441df8eSKris Buschelman /* Change type name before calling MatSetType to force proper construction of SeqSBAIJ or MPISBAIJ */ 10125441df8eSKris Buschelman /* and SBAIJMUMPS types */ 10135441df8eSKris Buschelman ierr = PetscObjectChangeTypeName((PetscObject)A,MATSBAIJMUMPS);CHKERRQ(ierr); 10145441df8eSKris Buschelman ierr = MPI_Comm_size(A->comm,&size);CHKERRQ(ierr);CHKERRQ(ierr); 1015397b6df1SKris Buschelman if (size == 1) { 1016397b6df1SKris Buschelman ierr = MatSetType(A,MATSEQSBAIJ);CHKERRQ(ierr); 1017397b6df1SKris Buschelman } else { 1018397b6df1SKris Buschelman ierr = MatSetType(A,MATMPISBAIJ);CHKERRQ(ierr); 1019397b6df1SKris Buschelman } 1020f0c56d0fSKris Buschelman ierr = MatConvert_SBAIJ_SBAIJMUMPS(A,MATSBAIJMUMPS,&A);CHKERRQ(ierr); 1021397b6df1SKris Buschelman PetscFunctionReturn(0); 1022397b6df1SKris Buschelman } 1023397b6df1SKris Buschelman EXTERN_C_END 1024