11c2a3de1SBarry Smith 2397b6df1SKris Buschelman /* 3c2b5dc30SHong Zhang Provides an interface to the MUMPS sparse solver 4397b6df1SKris Buschelman */ 551d5961aSHong Zhang 6c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> /*I "petscmat.h" I*/ 7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h> 87ee00b23SStefano Zampini #include <../src/mat/impls/sell/mpi/mpisell.h> 9397b6df1SKris Buschelman 10397b6df1SKris Buschelman EXTERN_C_BEGIN 11397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 122907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 132907cef9SHong Zhang #include <cmumps_c.h> 142907cef9SHong Zhang #else 15c6db04a5SJed Brown #include <zmumps_c.h> 162907cef9SHong Zhang #endif 172907cef9SHong Zhang #else 182907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 192907cef9SHong Zhang #include <smumps_c.h> 20397b6df1SKris Buschelman #else 21c6db04a5SJed Brown #include <dmumps_c.h> 22397b6df1SKris Buschelman #endif 232907cef9SHong Zhang #endif 24397b6df1SKris Buschelman EXTERN_C_END 25397b6df1SKris Buschelman #define JOB_INIT -1 263d472b54SHong Zhang #define JOB_FACTSYMBOLIC 1 273d472b54SHong Zhang #define JOB_FACTNUMERIC 2 283d472b54SHong Zhang #define JOB_SOLVE 3 29397b6df1SKris Buschelman #define JOB_END -2 303d472b54SHong Zhang 312907cef9SHong Zhang /* calls to MUMPS */ 322907cef9SHong Zhang #if defined(PETSC_USE_COMPLEX) 332907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 343ab56b82SJunchao Zhang #define MUMPS_c cmumps_c 352907cef9SHong Zhang #else 363ab56b82SJunchao Zhang #define MUMPS_c zmumps_c 372907cef9SHong Zhang #endif 382907cef9SHong Zhang #else 392907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 403ab56b82SJunchao Zhang #define MUMPS_c smumps_c 412907cef9SHong Zhang #else 423ab56b82SJunchao Zhang #define MUMPS_c dmumps_c 432907cef9SHong Zhang #endif 442907cef9SHong Zhang #endif 452907cef9SHong Zhang 46217d3b1eSJunchao Zhang /* if using PETSc OpenMP support, we only call MUMPS on master ranks. Before/after the call, we change/restore CPUs the master ranks can run on */ 473ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 483ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 493ab56b82SJunchao Zhang do { \ 503ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { \ 513ab56b82SJunchao Zhang if (mumps->is_omp_master) { \ 523ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterBegin(mumps->omp_ctrl);CHKERRQ(ierr); \ 533ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 543ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterEnd(mumps->omp_ctrl);CHKERRQ(ierr); \ 553ab56b82SJunchao Zhang } \ 563ab56b82SJunchao Zhang ierr = PetscOmpCtrlBarrier(mumps->omp_ctrl);CHKERRQ(ierr); \ 573ab56b82SJunchao Zhang } else { \ 583ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 593ab56b82SJunchao Zhang } \ 603ab56b82SJunchao Zhang } while(0) 613ab56b82SJunchao Zhang #else 623ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 633ab56b82SJunchao Zhang do { MUMPS_c(&mumps->id); } while (0) 643ab56b82SJunchao Zhang #endif 653ab56b82SJunchao Zhang 66940cd9d6SSatish Balay /* declare MumpsScalar */ 67940cd9d6SSatish Balay #if defined(PETSC_USE_COMPLEX) 68940cd9d6SSatish Balay #if defined(PETSC_USE_REAL_SINGLE) 69940cd9d6SSatish Balay #define MumpsScalar mumps_complex 70940cd9d6SSatish Balay #else 71940cd9d6SSatish Balay #define MumpsScalar mumps_double_complex 72940cd9d6SSatish Balay #endif 73940cd9d6SSatish Balay #else 74940cd9d6SSatish Balay #define MumpsScalar PetscScalar 75940cd9d6SSatish Balay #endif 763d472b54SHong Zhang 77397b6df1SKris Buschelman /* macros s.t. indices match MUMPS documentation */ 78397b6df1SKris Buschelman #define ICNTL(I) icntl[(I)-1] 79397b6df1SKris Buschelman #define CNTL(I) cntl[(I)-1] 80397b6df1SKris Buschelman #define INFOG(I) infog[(I)-1] 81a7aca84bSHong Zhang #define INFO(I) info[(I)-1] 82397b6df1SKris Buschelman #define RINFOG(I) rinfog[(I)-1] 83adc1d99fSHong Zhang #define RINFO(I) rinfo[(I)-1] 84397b6df1SKris Buschelman 85397b6df1SKris Buschelman typedef struct { 86397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 872907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 882907cef9SHong Zhang CMUMPS_STRUC_C id; 892907cef9SHong Zhang #else 90397b6df1SKris Buschelman ZMUMPS_STRUC_C id; 912907cef9SHong Zhang #endif 922907cef9SHong Zhang #else 932907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 942907cef9SHong Zhang SMUMPS_STRUC_C id; 95397b6df1SKris Buschelman #else 96397b6df1SKris Buschelman DMUMPS_STRUC_C id; 97397b6df1SKris Buschelman #endif 982907cef9SHong Zhang #endif 992907cef9SHong Zhang 100397b6df1SKris Buschelman MatStructure matstruc; 1012d4298aeSJunchao Zhang PetscMPIInt myid,petsc_size; 102a5e57a09SHong Zhang PetscInt *irn,*jcn,nz,sym; 103397b6df1SKris Buschelman PetscScalar *val; 1042d4298aeSJunchao Zhang MPI_Comm mumps_comm; 105a5e57a09SHong Zhang PetscInt ICNTL9_pre; /* check if ICNTL(9) is changed from previous MatSolve */ 106801fbe65SHong Zhang VecScatter scat_rhs, scat_sol; /* used by MatSolve() */ 107801fbe65SHong Zhang Vec b_seq,x_seq; 108b34f08ffSHong Zhang PetscInt ninfo,*info; /* display INFO */ 109b5fa320bSStefano Zampini PetscInt sizeredrhs; 11059ac8732SStefano Zampini PetscScalar *schur_sol; 11159ac8732SStefano Zampini PetscInt schur_sizesol; 1122205254eSKarl Rupp 1133ab56b82SJunchao Zhang PetscBool use_petsc_omp_support; 1143ab56b82SJunchao Zhang PetscOmpCtrl omp_ctrl; /* an OpenMP controler that blocked processes will release their CPU (MPI_Barrier does not have this guarantee) */ 1153ab56b82SJunchao Zhang MPI_Comm petsc_comm,omp_comm; /* petsc_comm is petsc matrix's comm */ 1163ab56b82SJunchao Zhang PetscMPIInt mpinz; /* on master rank, nz = sum(mpinz) over omp_comm; on other ranks, mpinz = nz*/ 1173ab56b82SJunchao Zhang PetscMPIInt omp_comm_size; 1183ab56b82SJunchao Zhang PetscBool is_omp_master; /* is this rank the master of omp_comm */ 1193ab56b82SJunchao Zhang PetscMPIInt *recvcount,*displs; 1203ab56b82SJunchao Zhang 121bccb9932SShri Abhyankar PetscErrorCode (*ConvertToTriples)(Mat, int, MatReuse, int*, int**, int**, PetscScalar**); 122f0c56d0fSKris Buschelman } Mat_MUMPS; 123f0c56d0fSKris Buschelman 12409573ac7SBarry Smith extern PetscErrorCode MatDuplicate_MUMPS(Mat,MatDuplicateOption,Mat*); 125b24902e0SBarry Smith 12659ac8732SStefano Zampini static PetscErrorCode MatMumpsResetSchur_Private(Mat_MUMPS* mumps) 127b5fa320bSStefano Zampini { 128b5fa320bSStefano Zampini PetscErrorCode ierr; 129b5fa320bSStefano Zampini 130b5fa320bSStefano Zampini PetscFunctionBegin; 13159ac8732SStefano Zampini ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr); 13259ac8732SStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 13359ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 13459ac8732SStefano Zampini mumps->id.size_schur = 0; 135b3cb21ddSStefano Zampini mumps->id.schur_lld = 0; 13659ac8732SStefano Zampini mumps->id.ICNTL(19) = 0; 13759ac8732SStefano Zampini PetscFunctionReturn(0); 13859ac8732SStefano Zampini } 13959ac8732SStefano Zampini 140b3cb21ddSStefano Zampini /* solve with rhs in mumps->id.redrhs and return in the same location */ 141b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsSolveSchur_Private(Mat F) 14259ac8732SStefano Zampini { 143b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 144b3cb21ddSStefano Zampini Mat S,B,X; 145b3cb21ddSStefano Zampini MatFactorSchurStatus schurstatus; 146b3cb21ddSStefano Zampini PetscInt sizesol; 14759ac8732SStefano Zampini PetscErrorCode ierr; 14859ac8732SStefano Zampini 14959ac8732SStefano Zampini PetscFunctionBegin; 150b3cb21ddSStefano Zampini ierr = MatFactorFactorizeSchurComplement(F);CHKERRQ(ierr); 151b3cb21ddSStefano Zampini ierr = MatFactorGetSchurComplement(F,&S,&schurstatus);CHKERRQ(ierr); 152b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&B);CHKERRQ(ierr); 153b3cb21ddSStefano Zampini switch (schurstatus) { 154b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_FACTORED: 155b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&X);CHKERRQ(ierr); 156b3cb21ddSStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 157b3cb21ddSStefano Zampini ierr = MatMatSolveTranspose(S,B,X);CHKERRQ(ierr); 15859ac8732SStefano Zampini } else { 159b3cb21ddSStefano Zampini ierr = MatMatSolve(S,B,X);CHKERRQ(ierr); 16059ac8732SStefano Zampini } 161b3cb21ddSStefano Zampini break; 162b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_INVERTED: 163b3cb21ddSStefano Zampini sizesol = mumps->id.nrhs*mumps->id.size_schur; 16459ac8732SStefano Zampini if (!mumps->schur_sol || sizesol > mumps->schur_sizesol) { 16559ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 16659ac8732SStefano Zampini ierr = PetscMalloc1(sizesol,&mumps->schur_sol);CHKERRQ(ierr); 16759ac8732SStefano Zampini mumps->schur_sizesol = sizesol; 168b5fa320bSStefano Zampini } 169b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,mumps->schur_sol,&X);CHKERRQ(ierr); 17059ac8732SStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 171b3cb21ddSStefano Zampini ierr = MatTransposeMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 172b5fa320bSStefano Zampini } else { 173b3cb21ddSStefano Zampini ierr = MatMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 174b5fa320bSStefano Zampini } 175b3cb21ddSStefano Zampini ierr = MatCopy(X,B,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 176b3cb21ddSStefano Zampini break; 177b3cb21ddSStefano Zampini default: 178b3cb21ddSStefano Zampini SETERRQ1(PetscObjectComm((PetscObject)F),PETSC_ERR_SUP,"Unhandled MatFactorSchurStatus %D",F->schur_status); 179b3cb21ddSStefano Zampini break; 18059ac8732SStefano Zampini } 181b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,&S,schurstatus);CHKERRQ(ierr); 182b3cb21ddSStefano Zampini ierr = MatDestroy(&B);CHKERRQ(ierr); 183b3cb21ddSStefano Zampini ierr = MatDestroy(&X);CHKERRQ(ierr); 184b5fa320bSStefano Zampini PetscFunctionReturn(0); 185b5fa320bSStefano Zampini } 186b5fa320bSStefano Zampini 187b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsHandleSchur_Private(Mat F, PetscBool expansion) 188b5fa320bSStefano Zampini { 189b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 190b5fa320bSStefano Zampini PetscErrorCode ierr; 191b5fa320bSStefano Zampini 192b5fa320bSStefano Zampini PetscFunctionBegin; 193b5fa320bSStefano Zampini if (!mumps->id.ICNTL(19)) { /* do nothing when Schur complement has not been computed */ 194b5fa320bSStefano Zampini PetscFunctionReturn(0); 195b5fa320bSStefano Zampini } 196b8f61ee1SStefano Zampini if (!expansion) { /* prepare for the condensation step */ 197b5fa320bSStefano Zampini PetscInt sizeredrhs = mumps->id.nrhs*mumps->id.size_schur; 198b5fa320bSStefano Zampini /* allocate MUMPS internal array to store reduced right-hand sides */ 199b5fa320bSStefano Zampini if (!mumps->id.redrhs || sizeredrhs > mumps->sizeredrhs) { 200b5fa320bSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 201b5fa320bSStefano Zampini mumps->id.lredrhs = mumps->id.size_schur; 202b5fa320bSStefano Zampini ierr = PetscMalloc1(mumps->id.nrhs*mumps->id.lredrhs,&mumps->id.redrhs);CHKERRQ(ierr); 203b5fa320bSStefano Zampini mumps->sizeredrhs = mumps->id.nrhs*mumps->id.lredrhs; 204b5fa320bSStefano Zampini } 205b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 1; /* condensation phase */ 206b5fa320bSStefano Zampini } else { /* prepare for the expansion step */ 207b8f61ee1SStefano Zampini /* solve Schur complement (this has to be done by the MUMPS user, so basically us) */ 208b3cb21ddSStefano Zampini ierr = MatMumpsSolveSchur_Private(F);CHKERRQ(ierr); 209b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 2; /* expansion phase */ 2103ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 211b5fa320bSStefano Zampini if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 212b5fa320bSStefano Zampini /* restore defaults */ 213b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 214d3d598ffSStefano Zampini /* free MUMPS internal array for redrhs if we have solved for multiple rhs in order to save memory space */ 215d3d598ffSStefano Zampini if (mumps->id.nrhs > 1) { 216d3d598ffSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 217d3d598ffSStefano Zampini mumps->id.lredrhs = 0; 218d3d598ffSStefano Zampini mumps->sizeredrhs = 0; 219d3d598ffSStefano Zampini } 220b5fa320bSStefano Zampini } 221b5fa320bSStefano Zampini PetscFunctionReturn(0); 222b5fa320bSStefano Zampini } 223b5fa320bSStefano Zampini 224397b6df1SKris Buschelman /* 225d341cd04SHong Zhang MatConvertToTriples_A_B - convert Petsc matrix to triples: row[nz], col[nz], val[nz] 226d341cd04SHong Zhang 227397b6df1SKris Buschelman input: 228*75480915SPierre Jolivet A - matrix in aij,baij or sbaij format 229397b6df1SKris Buschelman shift - 0: C style output triple; 1: Fortran style output triple. 230bccb9932SShri Abhyankar reuse - MAT_INITIAL_MATRIX: spaces are allocated and values are set for the triple 231bccb9932SShri Abhyankar MAT_REUSE_MATRIX: only the values in v array are updated 232397b6df1SKris Buschelman output: 233397b6df1SKris Buschelman nnz - dim of r, c, and v (number of local nonzero entries of A) 234397b6df1SKris Buschelman r, c, v - row and col index, matrix values (matrix triples) 235eb9baa12SBarry Smith 236eb9baa12SBarry Smith The returned values r, c, and sometimes v are obtained in a single PetscMalloc(). Then in MatDestroy_MUMPS() it is 2377ee00b23SStefano Zampini freed with PetscFree(mumps->irn); This is not ideal code, the fact that v is ONLY sometimes part of mumps->irn means 238eb9baa12SBarry Smith that the PetscMalloc() cannot easily be replaced with a PetscMalloc3(). 239eb9baa12SBarry Smith 240397b6df1SKris Buschelman */ 24116ebf90aSShri Abhyankar 242bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 243b24902e0SBarry Smith { 244185f6596SHong Zhang const PetscInt *ai,*aj,*ajj,M=A->rmap->n; 24567877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 246dfbe8321SBarry Smith PetscErrorCode ierr; 247c1490034SHong Zhang PetscInt *row,*col; 24816ebf90aSShri Abhyankar Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 249397b6df1SKris Buschelman 250397b6df1SKris Buschelman PetscFunctionBegin; 25116ebf90aSShri Abhyankar *v=aa->a; 252bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 2532205254eSKarl Rupp nz = aa->nz; 2542205254eSKarl Rupp ai = aa->i; 2552205254eSKarl Rupp aj = aa->j; 25616ebf90aSShri Abhyankar *nnz = nz; 257785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 258185f6596SHong Zhang col = row + nz; 259185f6596SHong Zhang 26016ebf90aSShri Abhyankar nz = 0; 26116ebf90aSShri Abhyankar for (i=0; i<M; i++) { 26216ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 26367877ebaSShri Abhyankar ajj = aj + ai[i]; 26467877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 26567877ebaSShri Abhyankar row[nz] = i+shift; col[nz++] = ajj[j] + shift; 26616ebf90aSShri Abhyankar } 26716ebf90aSShri Abhyankar } 26816ebf90aSShri Abhyankar *r = row; *c = col; 26916ebf90aSShri Abhyankar } 27016ebf90aSShri Abhyankar PetscFunctionReturn(0); 27116ebf90aSShri Abhyankar } 272397b6df1SKris Buschelman 2737ee00b23SStefano Zampini PetscErrorCode MatConvertToTriples_seqsell_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 2747ee00b23SStefano Zampini { 2757ee00b23SStefano Zampini Mat_SeqSELL *a=(Mat_SeqSELL*)A->data; 2767ee00b23SStefano Zampini PetscInt *ptr; 2777ee00b23SStefano Zampini 2787ee00b23SStefano Zampini PetscFunctionBegin; 2797ee00b23SStefano Zampini *v = a->val; 2807ee00b23SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 2817ee00b23SStefano Zampini PetscInt nz,i,j,row; 2827ee00b23SStefano Zampini PetscErrorCode ierr; 2837ee00b23SStefano Zampini 2847ee00b23SStefano Zampini nz = a->sliidx[a->totalslices]; 2857ee00b23SStefano Zampini *nnz = nz; 2867ee00b23SStefano Zampini ierr = PetscMalloc1(2*nz, &ptr);CHKERRQ(ierr); 2877ee00b23SStefano Zampini *r = ptr; 2887ee00b23SStefano Zampini *c = ptr + nz; 2897ee00b23SStefano Zampini 2907ee00b23SStefano Zampini for (i=0; i<a->totalslices; i++) { 2917ee00b23SStefano Zampini for (j=a->sliidx[i],row=0; j<a->sliidx[i+1]; j++,row=((row+1)&0x07)) { 2927ee00b23SStefano Zampini *ptr++ = 8*i + row + shift; 2937ee00b23SStefano Zampini } 2947ee00b23SStefano Zampini } 2957ee00b23SStefano Zampini for (i=0;i<nz;i++) *ptr++ = a->colidx[i] + shift; 2967ee00b23SStefano Zampini } 2977ee00b23SStefano Zampini PetscFunctionReturn(0); 2987ee00b23SStefano Zampini } 2997ee00b23SStefano Zampini 300bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqbaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 30167877ebaSShri Abhyankar { 30267877ebaSShri Abhyankar Mat_SeqBAIJ *aa=(Mat_SeqBAIJ*)A->data; 30333d57670SJed Brown const PetscInt *ai,*aj,*ajj,bs2 = aa->bs2; 30433d57670SJed Brown PetscInt bs,M,nz,idx=0,rnz,i,j,k,m; 30567877ebaSShri Abhyankar PetscErrorCode ierr; 30667877ebaSShri Abhyankar PetscInt *row,*col; 30767877ebaSShri Abhyankar 30867877ebaSShri Abhyankar PetscFunctionBegin; 30933d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 31033d57670SJed Brown M = A->rmap->N/bs; 311cf3759fdSShri Abhyankar *v = aa->a; 312bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 313cf3759fdSShri Abhyankar ai = aa->i; aj = aa->j; 31467877ebaSShri Abhyankar nz = bs2*aa->nz; 31567877ebaSShri Abhyankar *nnz = nz; 316785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 317185f6596SHong Zhang col = row + nz; 318185f6596SHong Zhang 31967877ebaSShri Abhyankar for (i=0; i<M; i++) { 32067877ebaSShri Abhyankar ajj = aj + ai[i]; 32167877ebaSShri Abhyankar rnz = ai[i+1] - ai[i]; 32267877ebaSShri Abhyankar for (k=0; k<rnz; k++) { 32367877ebaSShri Abhyankar for (j=0; j<bs; j++) { 32467877ebaSShri Abhyankar for (m=0; m<bs; m++) { 32567877ebaSShri Abhyankar row[idx] = i*bs + m + shift; 326cf3759fdSShri Abhyankar col[idx++] = bs*(ajj[k]) + j + shift; 32767877ebaSShri Abhyankar } 32867877ebaSShri Abhyankar } 32967877ebaSShri Abhyankar } 33067877ebaSShri Abhyankar } 331cf3759fdSShri Abhyankar *r = row; *c = col; 33267877ebaSShri Abhyankar } 33367877ebaSShri Abhyankar PetscFunctionReturn(0); 33467877ebaSShri Abhyankar } 33567877ebaSShri Abhyankar 336bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqsbaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 33716ebf90aSShri Abhyankar { 338*75480915SPierre Jolivet const PetscInt *ai, *aj,*ajj; 339*75480915SPierre Jolivet PetscInt nz,rnz,i,j,k,m,bs; 34016ebf90aSShri Abhyankar PetscErrorCode ierr; 34116ebf90aSShri Abhyankar PetscInt *row,*col; 342*75480915SPierre Jolivet PetscScalar *val; 34316ebf90aSShri Abhyankar Mat_SeqSBAIJ *aa=(Mat_SeqSBAIJ*)A->data; 344*75480915SPierre Jolivet const PetscInt bs2=aa->bs2,mbs=aa->mbs; 345*75480915SPierre Jolivet const PetscBool roworiented=aa->roworiented; 34638548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 34738548759SBarry Smith PetscBool hermitian; 34838548759SBarry Smith #endif 34916ebf90aSShri Abhyankar 35016ebf90aSShri Abhyankar PetscFunctionBegin; 35138548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 35238548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 35338548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 35438548759SBarry Smith #endif 3552205254eSKarl Rupp ai = aa->i; 3562205254eSKarl Rupp aj = aa->j; 357*75480915SPierre Jolivet ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 358*75480915SPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) { 359*75480915SPierre Jolivet nz = aa->nz; 360*75480915SPierre Jolivet ierr = PetscMalloc((2*bs2*nz*sizeof(PetscInt)+bs2*nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 361*75480915SPierre Jolivet col = row + bs2*nz; 362*75480915SPierre Jolivet val = (PetscScalar*)(col + bs2*nz); 363*75480915SPierre Jolivet 364*75480915SPierre Jolivet *r = row; *c = col; *v = val; 365*75480915SPierre Jolivet } else { 366*75480915SPierre Jolivet row = *r; col = *c; val = *v; 367*75480915SPierre Jolivet } 368185f6596SHong Zhang 36916ebf90aSShri Abhyankar nz = 0; 370*75480915SPierre Jolivet for (i=0; i<mbs; i++) { 37116ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 37267877ebaSShri Abhyankar ajj = aj + ai[i]; 373*75480915SPierre Jolivet if (roworiented) { 37467877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 375*75480915SPierre Jolivet for (k=0; k<bs; k++) { 376*75480915SPierre Jolivet for (m=0; m<bs; m++) { 377*75480915SPierre Jolivet if (ajj[j]>i || m>=k) { 378*75480915SPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) { 379*75480915SPierre Jolivet row[nz] = i*bs + k + shift; 380*75480915SPierre Jolivet col[nz] = ajj[j]*bs + m + shift; 381*75480915SPierre Jolivet } 382*75480915SPierre Jolivet val[nz++] = aa->a[(ai[i]+j)*bs2 + m + k*bs]; 38316ebf90aSShri Abhyankar } 38416ebf90aSShri Abhyankar } 38516ebf90aSShri Abhyankar } 386*75480915SPierre Jolivet } 387*75480915SPierre Jolivet } else { 388*75480915SPierre Jolivet for (j=0; j<rnz; j++) { 389*75480915SPierre Jolivet for (k=0; k<bs; k++) { 390*75480915SPierre Jolivet for (m=0; m<bs; m++) { 391*75480915SPierre Jolivet if (ajj[j]>i || m>=k) { 392*75480915SPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) { 393*75480915SPierre Jolivet row[nz] = i*bs + m + shift; 394*75480915SPierre Jolivet col[nz] = ajj[j]*bs + k + shift; 395*75480915SPierre Jolivet } 396*75480915SPierre Jolivet val[nz++] = aa->a[(ai[i]+j)*bs2 + m + k*bs]; 397*75480915SPierre Jolivet } 398*75480915SPierre Jolivet } 399*75480915SPierre Jolivet } 400*75480915SPierre Jolivet } 401*75480915SPierre Jolivet } 402*75480915SPierre Jolivet } 403*75480915SPierre Jolivet *nnz = nz; 40416ebf90aSShri Abhyankar PetscFunctionReturn(0); 40516ebf90aSShri Abhyankar } 40616ebf90aSShri Abhyankar 407bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 40816ebf90aSShri Abhyankar { 40967877ebaSShri Abhyankar const PetscInt *ai,*aj,*ajj,*adiag,M=A->rmap->n; 41067877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 41167877ebaSShri Abhyankar const PetscScalar *av,*v1; 41216ebf90aSShri Abhyankar PetscScalar *val; 41316ebf90aSShri Abhyankar PetscErrorCode ierr; 41416ebf90aSShri Abhyankar PetscInt *row,*col; 415829b1710SHong Zhang Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 41629b521d4Sstefano_zampini PetscBool missing; 41738548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 41838548759SBarry Smith PetscBool hermitian; 41938548759SBarry Smith #endif 42016ebf90aSShri Abhyankar 42116ebf90aSShri Abhyankar PetscFunctionBegin; 42238548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 42338548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 42438548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 42538548759SBarry Smith #endif 42616ebf90aSShri Abhyankar ai = aa->i; aj = aa->j; av = aa->a; 42716ebf90aSShri Abhyankar adiag = aa->diag; 42829b521d4Sstefano_zampini ierr = MatMissingDiagonal_SeqAIJ(A,&missing,&i);CHKERRQ(ierr); 429bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 4307ee00b23SStefano Zampini /* count nz in the upper triangular part of A */ 431829b1710SHong Zhang nz = 0; 43229b521d4Sstefano_zampini if (missing) { 43329b521d4Sstefano_zampini for (i=0; i<M; i++) { 43429b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 43529b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 43629b521d4Sstefano_zampini if (aj[j] < i) continue; 43729b521d4Sstefano_zampini nz++; 43829b521d4Sstefano_zampini } 43929b521d4Sstefano_zampini } else { 44029b521d4Sstefano_zampini nz += ai[i+1] - adiag[i]; 44129b521d4Sstefano_zampini } 44229b521d4Sstefano_zampini } 44329b521d4Sstefano_zampini } else { 444829b1710SHong Zhang for (i=0; i<M; i++) nz += ai[i+1] - adiag[i]; 44529b521d4Sstefano_zampini } 44616ebf90aSShri Abhyankar *nnz = nz; 447829b1710SHong Zhang 448185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 449185f6596SHong Zhang col = row + nz; 450185f6596SHong Zhang val = (PetscScalar*)(col + nz); 451185f6596SHong Zhang 45216ebf90aSShri Abhyankar nz = 0; 45329b521d4Sstefano_zampini if (missing) { 45429b521d4Sstefano_zampini for (i=0; i<M; i++) { 45529b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 45629b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 45729b521d4Sstefano_zampini if (aj[j] < i) continue; 45829b521d4Sstefano_zampini row[nz] = i+shift; 45929b521d4Sstefano_zampini col[nz] = aj[j]+shift; 46029b521d4Sstefano_zampini val[nz] = av[j]; 46129b521d4Sstefano_zampini nz++; 46229b521d4Sstefano_zampini } 46329b521d4Sstefano_zampini } else { 46429b521d4Sstefano_zampini rnz = ai[i+1] - adiag[i]; 46529b521d4Sstefano_zampini ajj = aj + adiag[i]; 46629b521d4Sstefano_zampini v1 = av + adiag[i]; 46729b521d4Sstefano_zampini for (j=0; j<rnz; j++) { 46829b521d4Sstefano_zampini row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 46929b521d4Sstefano_zampini } 47029b521d4Sstefano_zampini } 47129b521d4Sstefano_zampini } 47229b521d4Sstefano_zampini } else { 47316ebf90aSShri Abhyankar for (i=0; i<M; i++) { 47416ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 47567877ebaSShri Abhyankar ajj = aj + adiag[i]; 476cf3759fdSShri Abhyankar v1 = av + adiag[i]; 47767877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 47867877ebaSShri Abhyankar row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 47916ebf90aSShri Abhyankar } 48016ebf90aSShri Abhyankar } 48129b521d4Sstefano_zampini } 48216ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 483397b6df1SKris Buschelman } else { 48416ebf90aSShri Abhyankar nz = 0; val = *v; 48529b521d4Sstefano_zampini if (missing) { 48616ebf90aSShri Abhyankar for (i=0; i <M; i++) { 48729b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 48829b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 48929b521d4Sstefano_zampini if (aj[j] < i) continue; 49029b521d4Sstefano_zampini val[nz++] = av[j]; 49129b521d4Sstefano_zampini } 49229b521d4Sstefano_zampini } else { 49316ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 49467877ebaSShri Abhyankar v1 = av + adiag[i]; 49567877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 49667877ebaSShri Abhyankar val[nz++] = v1[j]; 49716ebf90aSShri Abhyankar } 49816ebf90aSShri Abhyankar } 49916ebf90aSShri Abhyankar } 50029b521d4Sstefano_zampini } else { 50116ebf90aSShri Abhyankar for (i=0; i <M; i++) { 50216ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 50316ebf90aSShri Abhyankar v1 = av + adiag[i]; 50416ebf90aSShri Abhyankar for (j=0; j<rnz; j++) { 50516ebf90aSShri Abhyankar val[nz++] = v1[j]; 50616ebf90aSShri Abhyankar } 50716ebf90aSShri Abhyankar } 50816ebf90aSShri Abhyankar } 50929b521d4Sstefano_zampini } 51016ebf90aSShri Abhyankar PetscFunctionReturn(0); 51116ebf90aSShri Abhyankar } 51216ebf90aSShri Abhyankar 513bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpisbaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 51416ebf90aSShri Abhyankar { 51516ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 51616ebf90aSShri Abhyankar PetscErrorCode ierr; 51716ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 51816ebf90aSShri Abhyankar PetscInt *row,*col; 51916ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 52016ebf90aSShri Abhyankar PetscScalar *val; 521397b6df1SKris Buschelman Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)A->data; 522397b6df1SKris Buschelman Mat_SeqSBAIJ *aa = (Mat_SeqSBAIJ*)(mat->A)->data; 523397b6df1SKris Buschelman Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 52438548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 52538548759SBarry Smith PetscBool hermitian; 52638548759SBarry Smith #endif 52716ebf90aSShri Abhyankar 52816ebf90aSShri Abhyankar PetscFunctionBegin; 52938548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 53038548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 53138548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 53238548759SBarry Smith #endif 53338548759SBarry Smith rstart = A->rmap->rstart; 53438548759SBarry Smith ai = aa->i; 53538548759SBarry Smith aj = aa->j; 53638548759SBarry Smith bi = bb->i; 53738548759SBarry Smith bj = bb->j; 53838548759SBarry Smith av = aa->a; 53938548759SBarry Smith bv = bb->a; 540397b6df1SKris Buschelman 5412205254eSKarl Rupp garray = mat->garray; 5422205254eSKarl Rupp 543bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 54416ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 54516ebf90aSShri Abhyankar *nnz = nz; 546185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 547185f6596SHong Zhang col = row + nz; 548185f6596SHong Zhang val = (PetscScalar*)(col + nz); 549185f6596SHong Zhang 550397b6df1SKris Buschelman *r = row; *c = col; *v = val; 551397b6df1SKris Buschelman } else { 552397b6df1SKris Buschelman row = *r; col = *c; val = *v; 553397b6df1SKris Buschelman } 554397b6df1SKris Buschelman 555028e57e8SHong Zhang jj = 0; irow = rstart; 556397b6df1SKris Buschelman for (i=0; i<m; i++) { 557397b6df1SKris Buschelman ajj = aj + ai[i]; /* ptr to the beginning of this row */ 558397b6df1SKris Buschelman countA = ai[i+1] - ai[i]; 559397b6df1SKris Buschelman countB = bi[i+1] - bi[i]; 560397b6df1SKris Buschelman bjj = bj + bi[i]; 56116ebf90aSShri Abhyankar v1 = av + ai[i]; 56216ebf90aSShri Abhyankar v2 = bv + bi[i]; 563397b6df1SKris Buschelman 564397b6df1SKris Buschelman /* A-part */ 565397b6df1SKris Buschelman for (j=0; j<countA; j++) { 566bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 567397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 568397b6df1SKris Buschelman } 56916ebf90aSShri Abhyankar val[jj++] = v1[j]; 570397b6df1SKris Buschelman } 57116ebf90aSShri Abhyankar 57216ebf90aSShri Abhyankar /* B-part */ 57316ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 574bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 575397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 576397b6df1SKris Buschelman } 57716ebf90aSShri Abhyankar val[jj++] = v2[j]; 57816ebf90aSShri Abhyankar } 57916ebf90aSShri Abhyankar irow++; 58016ebf90aSShri Abhyankar } 58116ebf90aSShri Abhyankar PetscFunctionReturn(0); 58216ebf90aSShri Abhyankar } 58316ebf90aSShri Abhyankar 584bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 58516ebf90aSShri Abhyankar { 58616ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 58716ebf90aSShri Abhyankar PetscErrorCode ierr; 58816ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 58916ebf90aSShri Abhyankar PetscInt *row,*col; 59016ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 59116ebf90aSShri Abhyankar PetscScalar *val; 59216ebf90aSShri Abhyankar Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 59316ebf90aSShri Abhyankar Mat_SeqAIJ *aa = (Mat_SeqAIJ*)(mat->A)->data; 59416ebf90aSShri Abhyankar Mat_SeqAIJ *bb = (Mat_SeqAIJ*)(mat->B)->data; 59516ebf90aSShri Abhyankar 59616ebf90aSShri Abhyankar PetscFunctionBegin; 59738548759SBarry Smith rstart = A->rmap->rstart; 59838548759SBarry Smith ai = aa->i; 59938548759SBarry Smith aj = aa->j; 60038548759SBarry Smith bi = bb->i; 60138548759SBarry Smith bj = bb->j; 60238548759SBarry Smith av = aa->a; 60338548759SBarry Smith bv = bb->a; 60416ebf90aSShri Abhyankar 6052205254eSKarl Rupp garray = mat->garray; 6062205254eSKarl Rupp 607bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 60816ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 60916ebf90aSShri Abhyankar *nnz = nz; 610185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 611185f6596SHong Zhang col = row + nz; 612185f6596SHong Zhang val = (PetscScalar*)(col + nz); 613185f6596SHong Zhang 61416ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 61516ebf90aSShri Abhyankar } else { 61616ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 61716ebf90aSShri Abhyankar } 61816ebf90aSShri Abhyankar 61916ebf90aSShri Abhyankar jj = 0; irow = rstart; 62016ebf90aSShri Abhyankar for (i=0; i<m; i++) { 62116ebf90aSShri Abhyankar ajj = aj + ai[i]; /* ptr to the beginning of this row */ 62216ebf90aSShri Abhyankar countA = ai[i+1] - ai[i]; 62316ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 62416ebf90aSShri Abhyankar bjj = bj + bi[i]; 62516ebf90aSShri Abhyankar v1 = av + ai[i]; 62616ebf90aSShri Abhyankar v2 = bv + bi[i]; 62716ebf90aSShri Abhyankar 62816ebf90aSShri Abhyankar /* A-part */ 62916ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 630bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 63116ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 63216ebf90aSShri Abhyankar } 63316ebf90aSShri Abhyankar val[jj++] = v1[j]; 63416ebf90aSShri Abhyankar } 63516ebf90aSShri Abhyankar 63616ebf90aSShri Abhyankar /* B-part */ 63716ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 638bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 63916ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 64016ebf90aSShri Abhyankar } 64116ebf90aSShri Abhyankar val[jj++] = v2[j]; 64216ebf90aSShri Abhyankar } 64316ebf90aSShri Abhyankar irow++; 64416ebf90aSShri Abhyankar } 64516ebf90aSShri Abhyankar PetscFunctionReturn(0); 64616ebf90aSShri Abhyankar } 64716ebf90aSShri Abhyankar 648bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpibaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 64967877ebaSShri Abhyankar { 65067877ebaSShri Abhyankar Mat_MPIBAIJ *mat = (Mat_MPIBAIJ*)A->data; 65167877ebaSShri Abhyankar Mat_SeqBAIJ *aa = (Mat_SeqBAIJ*)(mat->A)->data; 65267877ebaSShri Abhyankar Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 65367877ebaSShri Abhyankar const PetscInt *ai = aa->i, *bi = bb->i, *aj = aa->j, *bj = bb->j,*ajj, *bjj; 654d985c460SShri Abhyankar const PetscInt *garray = mat->garray,mbs=mat->mbs,rstart=A->rmap->rstart; 65533d57670SJed Brown const PetscInt bs2=mat->bs2; 65667877ebaSShri Abhyankar PetscErrorCode ierr; 65733d57670SJed Brown PetscInt bs,nz,i,j,k,n,jj,irow,countA,countB,idx; 65867877ebaSShri Abhyankar PetscInt *row,*col; 65967877ebaSShri Abhyankar const PetscScalar *av=aa->a, *bv=bb->a,*v1,*v2; 66067877ebaSShri Abhyankar PetscScalar *val; 66167877ebaSShri Abhyankar 66267877ebaSShri Abhyankar PetscFunctionBegin; 66333d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 664bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 66567877ebaSShri Abhyankar nz = bs2*(aa->nz + bb->nz); 66667877ebaSShri Abhyankar *nnz = nz; 667185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 668185f6596SHong Zhang col = row + nz; 669185f6596SHong Zhang val = (PetscScalar*)(col + nz); 670185f6596SHong Zhang 67167877ebaSShri Abhyankar *r = row; *c = col; *v = val; 67267877ebaSShri Abhyankar } else { 67367877ebaSShri Abhyankar row = *r; col = *c; val = *v; 67467877ebaSShri Abhyankar } 67567877ebaSShri Abhyankar 676d985c460SShri Abhyankar jj = 0; irow = rstart; 67767877ebaSShri Abhyankar for (i=0; i<mbs; i++) { 67867877ebaSShri Abhyankar countA = ai[i+1] - ai[i]; 67967877ebaSShri Abhyankar countB = bi[i+1] - bi[i]; 68067877ebaSShri Abhyankar ajj = aj + ai[i]; 68167877ebaSShri Abhyankar bjj = bj + bi[i]; 68267877ebaSShri Abhyankar v1 = av + bs2*ai[i]; 68367877ebaSShri Abhyankar v2 = bv + bs2*bi[i]; 68467877ebaSShri Abhyankar 68567877ebaSShri Abhyankar idx = 0; 68667877ebaSShri Abhyankar /* A-part */ 68767877ebaSShri Abhyankar for (k=0; k<countA; k++) { 68867877ebaSShri Abhyankar for (j=0; j<bs; j++) { 68967877ebaSShri Abhyankar for (n=0; n<bs; n++) { 690bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 691d985c460SShri Abhyankar row[jj] = irow + n + shift; 692d985c460SShri Abhyankar col[jj] = rstart + bs*ajj[k] + j + shift; 69367877ebaSShri Abhyankar } 69467877ebaSShri Abhyankar val[jj++] = v1[idx++]; 69567877ebaSShri Abhyankar } 69667877ebaSShri Abhyankar } 69767877ebaSShri Abhyankar } 69867877ebaSShri Abhyankar 69967877ebaSShri Abhyankar idx = 0; 70067877ebaSShri Abhyankar /* B-part */ 70167877ebaSShri Abhyankar for (k=0; k<countB; k++) { 70267877ebaSShri Abhyankar for (j=0; j<bs; j++) { 70367877ebaSShri Abhyankar for (n=0; n<bs; n++) { 704bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 705d985c460SShri Abhyankar row[jj] = irow + n + shift; 706d985c460SShri Abhyankar col[jj] = bs*garray[bjj[k]] + j + shift; 70767877ebaSShri Abhyankar } 708d985c460SShri Abhyankar val[jj++] = v2[idx++]; 70967877ebaSShri Abhyankar } 71067877ebaSShri Abhyankar } 71167877ebaSShri Abhyankar } 712d985c460SShri Abhyankar irow += bs; 71367877ebaSShri Abhyankar } 71467877ebaSShri Abhyankar PetscFunctionReturn(0); 71567877ebaSShri Abhyankar } 71667877ebaSShri Abhyankar 717bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 71816ebf90aSShri Abhyankar { 71916ebf90aSShri Abhyankar const PetscInt *ai, *aj,*adiag, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 72016ebf90aSShri Abhyankar PetscErrorCode ierr; 721e0bace9bSHong Zhang PetscInt rstart,nz,nza,nzb,i,j,jj,irow,countA,countB; 72216ebf90aSShri Abhyankar PetscInt *row,*col; 72316ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 72416ebf90aSShri Abhyankar PetscScalar *val; 72516ebf90aSShri Abhyankar Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 72616ebf90aSShri Abhyankar Mat_SeqAIJ *aa =(Mat_SeqAIJ*)(mat->A)->data; 72716ebf90aSShri Abhyankar Mat_SeqAIJ *bb =(Mat_SeqAIJ*)(mat->B)->data; 72838548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 72938548759SBarry Smith PetscBool hermitian; 73038548759SBarry Smith #endif 73116ebf90aSShri Abhyankar 73216ebf90aSShri Abhyankar PetscFunctionBegin; 73338548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 73438548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 73538548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 73638548759SBarry Smith #endif 73738548759SBarry Smith ai = aa->i; 73838548759SBarry Smith aj = aa->j; 73938548759SBarry Smith adiag = aa->diag; 74038548759SBarry Smith bi = bb->i; 74138548759SBarry Smith bj = bb->j; 74238548759SBarry Smith garray = mat->garray; 74338548759SBarry Smith av = aa->a; 74438548759SBarry Smith bv = bb->a; 7452205254eSKarl Rupp 74616ebf90aSShri Abhyankar rstart = A->rmap->rstart; 74716ebf90aSShri Abhyankar 748bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 749e0bace9bSHong Zhang nza = 0; /* num of upper triangular entries in mat->A, including diagonals */ 750e0bace9bSHong Zhang nzb = 0; /* num of upper triangular entries in mat->B */ 75116ebf90aSShri Abhyankar for (i=0; i<m; i++) { 752e0bace9bSHong Zhang nza += (ai[i+1] - adiag[i]); 75316ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 75416ebf90aSShri Abhyankar bjj = bj + bi[i]; 755e0bace9bSHong Zhang for (j=0; j<countB; j++) { 756e0bace9bSHong Zhang if (garray[bjj[j]] > rstart) nzb++; 757e0bace9bSHong Zhang } 758e0bace9bSHong Zhang } 75916ebf90aSShri Abhyankar 760e0bace9bSHong Zhang nz = nza + nzb; /* total nz of upper triangular part of mat */ 76116ebf90aSShri Abhyankar *nnz = nz; 762185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 763185f6596SHong Zhang col = row + nz; 764185f6596SHong Zhang val = (PetscScalar*)(col + nz); 765185f6596SHong Zhang 76616ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 76716ebf90aSShri Abhyankar } else { 76816ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 76916ebf90aSShri Abhyankar } 77016ebf90aSShri Abhyankar 77116ebf90aSShri Abhyankar jj = 0; irow = rstart; 77216ebf90aSShri Abhyankar for (i=0; i<m; i++) { 77316ebf90aSShri Abhyankar ajj = aj + adiag[i]; /* ptr to the beginning of the diagonal of this row */ 77416ebf90aSShri Abhyankar v1 = av + adiag[i]; 77516ebf90aSShri Abhyankar countA = ai[i+1] - adiag[i]; 77616ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 77716ebf90aSShri Abhyankar bjj = bj + bi[i]; 77816ebf90aSShri Abhyankar v2 = bv + bi[i]; 77916ebf90aSShri Abhyankar 78016ebf90aSShri Abhyankar /* A-part */ 78116ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 782bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 78316ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 78416ebf90aSShri Abhyankar } 78516ebf90aSShri Abhyankar val[jj++] = v1[j]; 78616ebf90aSShri Abhyankar } 78716ebf90aSShri Abhyankar 78816ebf90aSShri Abhyankar /* B-part */ 78916ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 79016ebf90aSShri Abhyankar if (garray[bjj[j]] > rstart) { 791bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 79216ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 79316ebf90aSShri Abhyankar } 79416ebf90aSShri Abhyankar val[jj++] = v2[j]; 79516ebf90aSShri Abhyankar } 796397b6df1SKris Buschelman } 797397b6df1SKris Buschelman irow++; 798397b6df1SKris Buschelman } 799397b6df1SKris Buschelman PetscFunctionReturn(0); 800397b6df1SKris Buschelman } 801397b6df1SKris Buschelman 802dfbe8321SBarry Smith PetscErrorCode MatDestroy_MUMPS(Mat A) 803dfbe8321SBarry Smith { 804e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 805dfbe8321SBarry Smith PetscErrorCode ierr; 806b24902e0SBarry Smith 807397b6df1SKris Buschelman PetscFunctionBegin; 808a5e57a09SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 809a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_rhs);CHKERRQ(ierr); 810a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 811801fbe65SHong Zhang ierr = VecDestroy(&mumps->b_seq);CHKERRQ(ierr); 812a5e57a09SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 813a5e57a09SHong Zhang ierr = PetscFree(mumps->id.perm_in);CHKERRQ(ierr); 814a5e57a09SHong Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); 815b34f08ffSHong Zhang ierr = PetscFree(mumps->info);CHKERRQ(ierr); 81659ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 817a5e57a09SHong Zhang mumps->id.job = JOB_END; 8183ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 8193ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 8203ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { ierr = PetscOmpCtrlDestroy(&mumps->omp_ctrl);CHKERRQ(ierr); } 8213ab56b82SJunchao Zhang #endif 8223ab56b82SJunchao Zhang ierr = PetscFree2(mumps->recvcount,mumps->displs);CHKERRQ(ierr); 823e69c285eSBarry Smith ierr = PetscFree(A->data);CHKERRQ(ierr); 824bf0cc555SLisandro Dalcin 82597969023SHong Zhang /* clear composed functions */ 8263ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 8275a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSetSchurIS_C",NULL);CHKERRQ(ierr); 8285a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorCreateSchurComplement_C",NULL);CHKERRQ(ierr); 829bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetIcntl_C",NULL);CHKERRQ(ierr); 830bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetIcntl_C",NULL);CHKERRQ(ierr); 831bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetCntl_C",NULL);CHKERRQ(ierr); 832bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetCntl_C",NULL);CHKERRQ(ierr); 833ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfo_C",NULL);CHKERRQ(ierr); 834ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfog_C",NULL);CHKERRQ(ierr); 835ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfo_C",NULL);CHKERRQ(ierr); 836ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfog_C",NULL);CHKERRQ(ierr); 83789a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverse_C",NULL);CHKERRQ(ierr); 8380e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverseTranspose_C",NULL);CHKERRQ(ierr); 839397b6df1SKris Buschelman PetscFunctionReturn(0); 840397b6df1SKris Buschelman } 841397b6df1SKris Buschelman 842b24902e0SBarry Smith PetscErrorCode MatSolve_MUMPS(Mat A,Vec b,Vec x) 843b24902e0SBarry Smith { 844e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 845d54de34fSKris Buschelman PetscScalar *array; 84667877ebaSShri Abhyankar Vec b_seq; 847329ec9b3SHong Zhang IS is_iden,is_petsc; 848dfbe8321SBarry Smith PetscErrorCode ierr; 849329ec9b3SHong Zhang PetscInt i; 850cc86f929SStefano Zampini PetscBool second_solve = PETSC_FALSE; 851883f2eb9SBarry Smith static PetscBool cite1 = PETSC_FALSE,cite2 = PETSC_FALSE; 852397b6df1SKris Buschelman 853397b6df1SKris Buschelman PetscFunctionBegin; 854883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS01,\n author = {P.~R. Amestoy and I.~S. Duff and J.-Y. L'Excellent and J. Koster},\n title = {A fully asynchronous multifrontal solver using distributed dynamic scheduling},\n journal = {SIAM Journal on Matrix Analysis and Applications},\n volume = {23},\n number = {1},\n pages = {15--41},\n year = {2001}\n}\n",&cite1);CHKERRQ(ierr); 855883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS02,\n author = {P.~R. Amestoy and A. Guermouche and J.-Y. L'Excellent and S. Pralet},\n title = {Hybrid scheduling for the parallel solution of linear systems},\n journal = {Parallel Computing},\n volume = {32},\n number = {2},\n pages = {136--156},\n year = {2006}\n}\n",&cite2);CHKERRQ(ierr); 8562aca8efcSHong Zhang 857603e8f96SBarry Smith if (A->factorerrortype) { 8582aca8efcSHong Zhang ierr = PetscInfo2(A,"MatSolve is called with singular matrix factor, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 8592aca8efcSHong Zhang ierr = VecSetInf(x);CHKERRQ(ierr); 8602aca8efcSHong Zhang PetscFunctionReturn(0); 8612aca8efcSHong Zhang } 8622aca8efcSHong Zhang 863be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 864a5e57a09SHong Zhang mumps->id.nrhs = 1; 865a5e57a09SHong Zhang b_seq = mumps->b_seq; 8662d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 867329ec9b3SHong Zhang /* MUMPS only supports centralized rhs. Scatter b into a seqential rhs vector */ 868a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 869a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 870a5e57a09SHong Zhang if (!mumps->myid) {ierr = VecGetArray(b_seq,&array);CHKERRQ(ierr);} 8713ab56b82SJunchao Zhang } else { /* petsc_size == 1 */ 872397b6df1SKris Buschelman ierr = VecCopy(b,x);CHKERRQ(ierr); 873397b6df1SKris Buschelman ierr = VecGetArray(x,&array);CHKERRQ(ierr); 874397b6df1SKris Buschelman } 875a5e57a09SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 876a5e57a09SHong Zhang mumps->id.nrhs = 1; 877940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)array; 878397b6df1SKris Buschelman } 879397b6df1SKris Buschelman 880cc86f929SStefano Zampini /* 881cc86f929SStefano Zampini handle condensation step of Schur complement (if any) 882cc86f929SStefano Zampini We set by default ICNTL(26) == -1 when Schur indices have been provided by the user. 883cc86f929SStefano Zampini According to MUMPS (5.0.0) manual, any value should be harmful during the factorization phase 884cc86f929SStefano Zampini Unless the user provides a valid value for ICNTL(26), MatSolve and MatMatSolve routines solve the full system. 885cc86f929SStefano Zampini This requires an extra call to PetscMUMPS_c and the computation of the factors for S 886cc86f929SStefano Zampini */ 887583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 8882d4298aeSJunchao Zhang if (mumps->petsc_size > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 889cc86f929SStefano Zampini second_solve = PETSC_TRUE; 890b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 891cc86f929SStefano Zampini } 892397b6df1SKris Buschelman /* solve phase */ 893329ec9b3SHong Zhang /*-------------*/ 894a5e57a09SHong Zhang mumps->id.job = JOB_SOLVE; 8953ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 896a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 897397b6df1SKris Buschelman 898b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 899cc86f929SStefano Zampini if (second_solve) { 900b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 901cc86f929SStefano Zampini } 902b5fa320bSStefano Zampini 9032d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { /* convert mumps distributed solution to petsc mpi x */ 904a5e57a09SHong Zhang if (mumps->scat_sol && mumps->ICNTL9_pre != mumps->id.ICNTL(9)) { 905a5e57a09SHong Zhang /* when id.ICNTL(9) changes, the contents of lsol_loc may change (not its size, lsol_loc), recreates scat_sol */ 906a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 907397b6df1SKris Buschelman } 908a5e57a09SHong Zhang if (!mumps->scat_sol) { /* create scatter scat_sol */ 909a5e57a09SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,mumps->id.lsol_loc,0,1,&is_iden);CHKERRQ(ierr); /* from */ 910a5e57a09SHong Zhang for (i=0; i<mumps->id.lsol_loc; i++) { 911a5e57a09SHong Zhang mumps->id.isol_loc[i] -= 1; /* change Fortran style to C style */ 912a5e57a09SHong Zhang } 913a5e57a09SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,mumps->id.lsol_loc,mumps->id.isol_loc,PETSC_COPY_VALUES,&is_petsc);CHKERRQ(ierr); /* to */ 9149448b7f1SJunchao Zhang ierr = VecScatterCreate(mumps->x_seq,is_iden,x,is_petsc,&mumps->scat_sol);CHKERRQ(ierr); 9156bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 9166bf464f9SBarry Smith ierr = ISDestroy(&is_petsc);CHKERRQ(ierr); 9172205254eSKarl Rupp 918a5e57a09SHong Zhang mumps->ICNTL9_pre = mumps->id.ICNTL(9); /* save current value of id.ICNTL(9) */ 919397b6df1SKris Buschelman } 920a5e57a09SHong Zhang 921a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 922a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 923329ec9b3SHong Zhang } 924353d7d71SJunchao Zhang 925353d7d71SJunchao Zhang if (mumps->petsc_size > 1) {if (!mumps->myid) {ierr = VecRestoreArray(b_seq,&array);CHKERRQ(ierr);}} 926353d7d71SJunchao Zhang else {ierr = VecRestoreArray(x,&array);CHKERRQ(ierr);} 927353d7d71SJunchao Zhang 9289880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*mumps->id.RINFO(3));CHKERRQ(ierr); 929397b6df1SKris Buschelman PetscFunctionReturn(0); 930397b6df1SKris Buschelman } 931397b6df1SKris Buschelman 93251d5961aSHong Zhang PetscErrorCode MatSolveTranspose_MUMPS(Mat A,Vec b,Vec x) 93351d5961aSHong Zhang { 934e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 93551d5961aSHong Zhang PetscErrorCode ierr; 93651d5961aSHong Zhang 93751d5961aSHong Zhang PetscFunctionBegin; 938a5e57a09SHong Zhang mumps->id.ICNTL(9) = 0; 9390ad0caddSJed Brown ierr = MatSolve_MUMPS(A,b,x);CHKERRQ(ierr); 940a5e57a09SHong Zhang mumps->id.ICNTL(9) = 1; 94151d5961aSHong Zhang PetscFunctionReturn(0); 94251d5961aSHong Zhang } 94351d5961aSHong Zhang 944e0b74bf9SHong Zhang PetscErrorCode MatMatSolve_MUMPS(Mat A,Mat B,Mat X) 945e0b74bf9SHong Zhang { 946bda8bf91SBarry Smith PetscErrorCode ierr; 947b8491c3eSStefano Zampini Mat Bt = NULL; 948b8491c3eSStefano Zampini PetscBool flg, flgT; 949e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 950334c5f61SHong Zhang PetscInt i,nrhs,M; 9511683a169SBarry Smith PetscScalar *array; 9521683a169SBarry Smith const PetscScalar *rbray; 9535b7de3c2SKarl Rupp PetscInt lsol_loc,nlsol_loc,*isol_loc,*idxx,*isol_loc_save,iidx = 0; 9541683a169SBarry Smith PetscScalar *bray,*sol_loc,*sol_loc_save; 955be818407SHong Zhang IS is_to,is_from; 956beae5ec0SHong Zhang PetscInt k,proc,j,m,myrstart; 957be818407SHong Zhang const PetscInt *rstart; 958beae5ec0SHong Zhang Vec v_mpi,b_seq,msol_loc; 959be818407SHong Zhang VecScatter scat_rhs,scat_sol; 960be818407SHong Zhang PetscScalar *aa; 961be818407SHong Zhang PetscInt spnr,*ia,*ja; 962d56c302dSHong Zhang Mat_MPIAIJ *b = NULL; 963bda8bf91SBarry Smith 964e0b74bf9SHong Zhang PetscFunctionBegin; 965be818407SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)X,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 966be818407SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_ARG_WRONG,"Matrix X must be MATDENSE matrix"); 967be818407SHong Zhang 9680298fd71SBarry Smith ierr = PetscObjectTypeCompareAny((PetscObject)B,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 969be818407SHong Zhang if (flg) { /* dense B */ 970c0be3364SHong Zhang if (B->rmap->n != X->rmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Matrix B and X must have same row distribution"); 971be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 9720e6b8875SHong Zhang } else { /* sparse B */ 973be818407SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)B,MATTRANSPOSEMAT,&flgT);CHKERRQ(ierr); 9740e6b8875SHong Zhang if (flgT) { /* input B is transpose of actural RHS matrix, 9750e6b8875SHong Zhang because mumps requires sparse compressed COLUMN storage! See MatMatTransposeSolve_MUMPS() */ 976be818407SHong Zhang ierr = MatTransposeGetMat(B,&Bt);CHKERRQ(ierr); 9770f52d626SJunchao Zhang } else SETERRQ(PetscObjectComm((PetscObject)B),PETSC_ERR_ARG_WRONG,"Matrix B must be MATTRANSPOSEMAT matrix"); 978be818407SHong Zhang mumps->id.ICNTL(20)= 1; /* sparse RHS */ 979b8491c3eSStefano Zampini } 98087b22cf4SHong Zhang 9819481e6e9SHong Zhang ierr = MatGetSize(B,&M,&nrhs);CHKERRQ(ierr); 9829481e6e9SHong Zhang mumps->id.nrhs = nrhs; 9839481e6e9SHong Zhang mumps->id.lrhs = M; 9842b691707SHong Zhang mumps->id.rhs = NULL; 9859481e6e9SHong Zhang 9862d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 987b8491c3eSStefano Zampini PetscScalar *aa; 988b8491c3eSStefano Zampini PetscInt spnr,*ia,*ja; 989e94cce23SStefano Zampini PetscBool second_solve = PETSC_FALSE; 990b8491c3eSStefano Zampini 9912cd7d884SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 992b8491c3eSStefano Zampini mumps->id.rhs = (MumpsScalar*)array; 9932b691707SHong Zhang 9942b691707SHong Zhang if (!Bt) { /* dense B */ 9952b691707SHong Zhang /* copy B to X */ 9961683a169SBarry Smith ierr = MatDenseGetArrayRead(B,&rbray);CHKERRQ(ierr); 997580bdb30SBarry Smith ierr = PetscArraycpy(array,rbray,M*nrhs);CHKERRQ(ierr); 9981683a169SBarry Smith ierr = MatDenseRestoreArrayRead(B,&rbray);CHKERRQ(ierr); 9992b691707SHong Zhang } else { /* sparse B */ 1000b8491c3eSStefano Zampini ierr = MatSeqAIJGetArray(Bt,&aa);CHKERRQ(ierr); 1001be818407SHong Zhang ierr = MatGetRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1002c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 10032b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 1004b8491c3eSStefano Zampini mumps->id.irhs_ptr = ia; 1005b8491c3eSStefano Zampini mumps->id.irhs_sparse = ja; 1006b8491c3eSStefano Zampini mumps->id.nz_rhs = ia[spnr] - 1; 1007b8491c3eSStefano Zampini mumps->id.rhs_sparse = (MumpsScalar*)aa; 1008b8491c3eSStefano Zampini } 1009e94cce23SStefano Zampini /* handle condensation step of Schur complement (if any) */ 1010583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 1011e94cce23SStefano Zampini second_solve = PETSC_TRUE; 1012b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 1013e94cce23SStefano Zampini } 10142cd7d884SHong Zhang /* solve phase */ 10152cd7d884SHong Zhang /*-------------*/ 10162cd7d884SHong Zhang mumps->id.job = JOB_SOLVE; 10173ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 10182cd7d884SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 1019b5fa320bSStefano Zampini 1020b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 1021e94cce23SStefano Zampini if (second_solve) { 1022b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 1023e94cce23SStefano Zampini } 10242b691707SHong Zhang if (Bt) { /* sparse B */ 1025b8491c3eSStefano Zampini ierr = MatSeqAIJRestoreArray(Bt,&aa);CHKERRQ(ierr); 1026be818407SHong Zhang ierr = MatRestoreRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1027c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 1028b8491c3eSStefano Zampini } 10292cd7d884SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 1030be818407SHong Zhang PetscFunctionReturn(0); 1031be818407SHong Zhang } 1032801fbe65SHong Zhang 1033be818407SHong Zhang /*--------- parallel case: MUMPS requires rhs B to be centralized on the host! --------*/ 10342d4298aeSJunchao Zhang if (mumps->petsc_size > 1 && mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 1035241dbb5eSStefano Zampini 1036beae5ec0SHong Zhang /* create msol_loc to hold mumps local solution */ 10371683a169SBarry Smith isol_loc_save = mumps->id.isol_loc; /* save it for MatSolve() */ 10381683a169SBarry Smith sol_loc_save = (PetscScalar*)mumps->id.sol_loc; 1039801fbe65SHong Zhang 1040a1dfcbd9SJunchao Zhang lsol_loc = mumps->id.lsol_loc; 104171aed81dSHong Zhang nlsol_loc = nrhs*lsol_loc; /* length of sol_loc */ 1042a1dfcbd9SJunchao Zhang ierr = PetscMalloc2(nlsol_loc,&sol_loc,lsol_loc,&isol_loc);CHKERRQ(ierr); 1043940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 1044801fbe65SHong Zhang mumps->id.isol_loc = isol_loc; 1045801fbe65SHong Zhang 1046beae5ec0SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,nlsol_loc,(PetscScalar*)sol_loc,&msol_loc);CHKERRQ(ierr); 10472cd7d884SHong Zhang 10482b691707SHong Zhang if (!Bt) { /* dense B */ 104980577c12SJunchao Zhang /* TODO: Because of non-contiguous indices, the created vecscatter scat_rhs is not done in MPI_Gather, resulting in 105080577c12SJunchao Zhang very inefficient communication. An optimization is to use VecScatterCreateToZero to gather B to rank 0. Then on rank 105180577c12SJunchao Zhang 0, re-arrange B into desired order, which is a local operation. 105280577c12SJunchao Zhang */ 105380577c12SJunchao Zhang 1054beae5ec0SHong Zhang /* scatter v_mpi to b_seq because MUMPS only supports centralized rhs */ 1055be818407SHong Zhang /* wrap dense rhs matrix B into a vector v_mpi */ 10562b691707SHong Zhang ierr = MatGetLocalSize(B,&m,NULL);CHKERRQ(ierr); 10572b691707SHong Zhang ierr = MatDenseGetArray(B,&bray);CHKERRQ(ierr); 10582b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)B),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 10592b691707SHong Zhang ierr = MatDenseRestoreArray(B,&bray);CHKERRQ(ierr); 10602b691707SHong Zhang 1061be818407SHong Zhang /* scatter v_mpi to b_seq in proc[0]. MUMPS requires rhs to be centralized on the host! */ 1062801fbe65SHong Zhang if (!mumps->myid) { 1063beae5ec0SHong Zhang PetscInt *idx; 1064beae5ec0SHong Zhang /* idx: maps from k-th index of v_mpi to (i,j)-th global entry of B */ 1065beae5ec0SHong Zhang ierr = PetscMalloc1(nrhs*M,&idx);CHKERRQ(ierr); 1066be818407SHong Zhang ierr = MatGetOwnershipRanges(B,&rstart);CHKERRQ(ierr); 1067be818407SHong Zhang k = 0; 10682d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 1069be818407SHong Zhang for (j=0; j<nrhs; j++){ 1070beae5ec0SHong Zhang for (i=rstart[proc]; i<rstart[proc+1]; i++) idx[k++] = j*M + i; 1071be818407SHong Zhang } 1072be818407SHong Zhang } 1073be818407SHong Zhang 1074334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,nrhs*M,&b_seq);CHKERRQ(ierr); 1075beae5ec0SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nrhs*M,idx,PETSC_OWN_POINTER,&is_to);CHKERRQ(ierr); 1076801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nrhs*M,0,1,&is_from);CHKERRQ(ierr); 1077801fbe65SHong Zhang } else { 1078334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&b_seq);CHKERRQ(ierr); 1079801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_to);CHKERRQ(ierr); 1080801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_from);CHKERRQ(ierr); 1081801fbe65SHong Zhang } 10829448b7f1SJunchao Zhang ierr = VecScatterCreate(v_mpi,is_from,b_seq,is_to,&scat_rhs);CHKERRQ(ierr); 1083334c5f61SHong Zhang ierr = VecScatterBegin(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1084801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1085801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1086334c5f61SHong Zhang ierr = VecScatterEnd(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1087801fbe65SHong Zhang 1088801fbe65SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 1089334c5f61SHong Zhang ierr = VecGetArray(b_seq,&bray);CHKERRQ(ierr); 1090940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)bray; 1091334c5f61SHong Zhang ierr = VecRestoreArray(b_seq,&bray);CHKERRQ(ierr); 1092801fbe65SHong Zhang } 1093801fbe65SHong Zhang 10942b691707SHong Zhang } else { /* sparse B */ 10952b691707SHong Zhang b = (Mat_MPIAIJ*)Bt->data; 10962b691707SHong Zhang 1097be818407SHong Zhang /* wrap dense X into a vector v_mpi */ 10982b691707SHong Zhang ierr = MatGetLocalSize(X,&m,NULL);CHKERRQ(ierr); 10992b691707SHong Zhang ierr = MatDenseGetArray(X,&bray);CHKERRQ(ierr); 11002b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)X),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 11012b691707SHong Zhang ierr = MatDenseRestoreArray(X,&bray);CHKERRQ(ierr); 11022b691707SHong Zhang 11032b691707SHong Zhang if (!mumps->myid) { 11042b691707SHong Zhang ierr = MatSeqAIJGetArray(b->A,&aa);CHKERRQ(ierr); 1105be818407SHong Zhang ierr = MatGetRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1106c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 11072b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 11082b691707SHong Zhang mumps->id.irhs_ptr = ia; 11092b691707SHong Zhang mumps->id.irhs_sparse = ja; 11102b691707SHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 11112b691707SHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 11122b691707SHong Zhang } else { 11132b691707SHong Zhang mumps->id.irhs_ptr = NULL; 11142b691707SHong Zhang mumps->id.irhs_sparse = NULL; 11152b691707SHong Zhang mumps->id.nz_rhs = 0; 11162b691707SHong Zhang mumps->id.rhs_sparse = NULL; 11172b691707SHong Zhang } 11182b691707SHong Zhang } 11192b691707SHong Zhang 1120801fbe65SHong Zhang /* solve phase */ 1121801fbe65SHong Zhang /*-------------*/ 1122801fbe65SHong Zhang mumps->id.job = JOB_SOLVE; 11233ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1124801fbe65SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 1125801fbe65SHong Zhang 1126334c5f61SHong Zhang /* scatter mumps distributed solution to petsc vector v_mpi, which shares local arrays with solution matrix X */ 112774f0fcc7SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 112874f0fcc7SHong Zhang ierr = VecPlaceArray(v_mpi,array);CHKERRQ(ierr); 1129801fbe65SHong Zhang 1130334c5f61SHong Zhang /* create scatter scat_sol */ 1131be818407SHong Zhang ierr = MatGetOwnershipRanges(X,&rstart);CHKERRQ(ierr); 1132beae5ec0SHong Zhang /* iidx: index for scatter mumps solution to petsc X */ 1133beae5ec0SHong Zhang 1134beae5ec0SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nlsol_loc,0,1,&is_from);CHKERRQ(ierr); 1135beae5ec0SHong Zhang ierr = PetscMalloc1(nlsol_loc,&idxx);CHKERRQ(ierr); 1136beae5ec0SHong Zhang for (i=0; i<lsol_loc; i++) { 1137beae5ec0SHong Zhang isol_loc[i] -= 1; /* change Fortran style to C style. isol_loc[i+j*lsol_loc] contains x[isol_loc[i]] in j-th vector */ 1138beae5ec0SHong Zhang 11392d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 1140beae5ec0SHong Zhang if (isol_loc[i] >= rstart[proc] && isol_loc[i] < rstart[proc+1]) { 1141beae5ec0SHong Zhang myrstart = rstart[proc]; 1142beae5ec0SHong Zhang k = isol_loc[i] - myrstart; /* local index on 1st column of petsc vector X */ 1143beae5ec0SHong Zhang iidx = k + myrstart*nrhs; /* maps mumps isol_loc[i] to petsc index in X */ 1144beae5ec0SHong Zhang m = rstart[proc+1] - rstart[proc]; /* rows of X for this proc */ 1145beae5ec0SHong Zhang break; 1146be818407SHong Zhang } 1147be818407SHong Zhang } 1148be818407SHong Zhang 1149beae5ec0SHong Zhang for (j=0; j<nrhs; j++) idxx[i+j*lsol_loc] = iidx + j*m; 1150801fbe65SHong Zhang } 1151be818407SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nlsol_loc,idxx,PETSC_COPY_VALUES,&is_to);CHKERRQ(ierr); 1152beae5ec0SHong Zhang ierr = VecScatterCreate(msol_loc,is_from,v_mpi,is_to,&scat_sol);CHKERRQ(ierr); 1153beae5ec0SHong Zhang ierr = VecScatterBegin(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1154801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1155801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1156beae5ec0SHong Zhang ierr = VecScatterEnd(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1157801fbe65SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 115871aed81dSHong Zhang 115971aed81dSHong Zhang /* free spaces */ 11601683a169SBarry Smith mumps->id.sol_loc = (MumpsScalar*)sol_loc_save; 116171aed81dSHong Zhang mumps->id.isol_loc = isol_loc_save; 116271aed81dSHong Zhang 116371aed81dSHong Zhang ierr = PetscFree2(sol_loc,isol_loc);CHKERRQ(ierr); 1164801fbe65SHong Zhang ierr = PetscFree(idxx);CHKERRQ(ierr); 1165beae5ec0SHong Zhang ierr = VecDestroy(&msol_loc);CHKERRQ(ierr); 116674f0fcc7SHong Zhang ierr = VecDestroy(&v_mpi);CHKERRQ(ierr); 11672b691707SHong Zhang if (Bt) { 11682b691707SHong Zhang if (!mumps->myid) { 1169d56c302dSHong Zhang b = (Mat_MPIAIJ*)Bt->data; 11702b691707SHong Zhang ierr = MatSeqAIJRestoreArray(b->A,&aa);CHKERRQ(ierr); 1171be818407SHong Zhang ierr = MatRestoreRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1172c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 11732b691707SHong Zhang } 11742b691707SHong Zhang } else { 1175334c5f61SHong Zhang ierr = VecDestroy(&b_seq);CHKERRQ(ierr); 1176334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_rhs);CHKERRQ(ierr); 11772b691707SHong Zhang } 1178334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_sol);CHKERRQ(ierr); 11799880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*nrhs*mumps->id.RINFO(3));CHKERRQ(ierr); 1180e0b74bf9SHong Zhang PetscFunctionReturn(0); 1181e0b74bf9SHong Zhang } 1182e0b74bf9SHong Zhang 1183eb3ef3b2SHong Zhang PetscErrorCode MatMatTransposeSolve_MUMPS(Mat A,Mat Bt,Mat X) 1184eb3ef3b2SHong Zhang { 1185eb3ef3b2SHong Zhang PetscErrorCode ierr; 1186eb3ef3b2SHong Zhang PetscBool flg; 1187eb3ef3b2SHong Zhang Mat B; 1188eb3ef3b2SHong Zhang 1189eb3ef3b2SHong Zhang PetscFunctionBegin; 1190eb3ef3b2SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)Bt,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 1191eb3ef3b2SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)Bt),PETSC_ERR_ARG_WRONG,"Matrix Bt must be MATAIJ matrix"); 1192eb3ef3b2SHong Zhang 1193eb3ef3b2SHong Zhang /* Create B=Bt^T that uses Bt's data structure */ 1194eb3ef3b2SHong Zhang ierr = MatCreateTranspose(Bt,&B);CHKERRQ(ierr); 1195eb3ef3b2SHong Zhang 11960e6b8875SHong Zhang ierr = MatMatSolve_MUMPS(A,B,X);CHKERRQ(ierr); 1197eb3ef3b2SHong Zhang ierr = MatDestroy(&B);CHKERRQ(ierr); 1198eb3ef3b2SHong Zhang PetscFunctionReturn(0); 1199eb3ef3b2SHong Zhang } 1200eb3ef3b2SHong Zhang 1201ace3df97SHong Zhang #if !defined(PETSC_USE_COMPLEX) 1202a58c3f20SHong Zhang /* 1203a58c3f20SHong Zhang input: 1204a58c3f20SHong Zhang F: numeric factor 1205a58c3f20SHong Zhang output: 1206a58c3f20SHong Zhang nneg: total number of negative pivots 120719d49a3bSHong Zhang nzero: total number of zero pivots 120819d49a3bSHong Zhang npos: (global dimension of F) - nneg - nzero 1209a58c3f20SHong Zhang */ 1210dfbe8321SBarry Smith PetscErrorCode MatGetInertia_SBAIJMUMPS(Mat F,int *nneg,int *nzero,int *npos) 1211a58c3f20SHong Zhang { 1212e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1213dfbe8321SBarry Smith PetscErrorCode ierr; 1214c1490034SHong Zhang PetscMPIInt size; 1215a58c3f20SHong Zhang 1216a58c3f20SHong Zhang PetscFunctionBegin; 1217ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)F),&size);CHKERRQ(ierr); 1218bcb30aebSHong Zhang /* MUMPS 4.3.1 calls ScaLAPACK when ICNTL(13)=0 (default), which does not offer the possibility to compute the inertia of a dense matrix. Set ICNTL(13)=1 to skip ScaLAPACK */ 1219a5e57a09SHong Zhang if (size > 1 && mumps->id.ICNTL(13) != 1) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"ICNTL(13)=%d. -mat_mumps_icntl_13 must be set as 1 for correct global matrix inertia\n",mumps->id.INFOG(13)); 1220ed85ac9fSHong Zhang 1221710ac8efSHong Zhang if (nneg) *nneg = mumps->id.INFOG(12); 1222ed85ac9fSHong Zhang if (nzero || npos) { 1223ed85ac9fSHong Zhang if (mumps->id.ICNTL(24) != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"-mat_mumps_icntl_24 must be set as 1 for null pivot row detection"); 1224710ac8efSHong Zhang if (nzero) *nzero = mumps->id.INFOG(28); 1225710ac8efSHong Zhang if (npos) *npos = F->rmap->N - (mumps->id.INFOG(12) + mumps->id.INFOG(28)); 1226a58c3f20SHong Zhang } 1227a58c3f20SHong Zhang PetscFunctionReturn(0); 1228a58c3f20SHong Zhang } 122919d49a3bSHong Zhang #endif 1230a58c3f20SHong Zhang 12313ab56b82SJunchao Zhang PetscErrorCode MatMumpsGatherNonzerosOnMaster(MatReuse reuse,Mat_MUMPS *mumps) 12323ab56b82SJunchao Zhang { 12333ab56b82SJunchao Zhang PetscErrorCode ierr; 12346ac9f4daSSatish Balay PetscInt i,nz=0,*irn,*jcn=0; 12356ac9f4daSSatish Balay PetscScalar *val=0; 12363ab56b82SJunchao Zhang PetscMPIInt mpinz,*recvcount=NULL,*displs=NULL; 12373ab56b82SJunchao Zhang 12383ab56b82SJunchao Zhang PetscFunctionBegin; 12393ab56b82SJunchao Zhang if (mumps->omp_comm_size > 1) { 12403ab56b82SJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { 12413ab56b82SJunchao Zhang /* master first gathers counts of nonzeros to receive */ 12423ab56b82SJunchao Zhang if (mumps->is_omp_master) { ierr = PetscMalloc2(mumps->omp_comm_size,&recvcount,mumps->omp_comm_size,&displs);CHKERRQ(ierr); } 12433ab56b82SJunchao Zhang ierr = PetscMPIIntCast(mumps->nz,&mpinz);CHKERRQ(ierr); 12443ab56b82SJunchao Zhang ierr = MPI_Gather(&mpinz,1,MPI_INT,recvcount,1,MPI_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12453ab56b82SJunchao Zhang 12463ab56b82SJunchao Zhang /* master allocates memory to receive nonzeros */ 12473ab56b82SJunchao Zhang if (mumps->is_omp_master) { 12483ab56b82SJunchao Zhang displs[0] = 0; 12493ab56b82SJunchao Zhang for (i=1; i<mumps->omp_comm_size; i++) displs[i] = displs[i-1] + recvcount[i-1]; 12503ab56b82SJunchao Zhang nz = displs[mumps->omp_comm_size-1] + recvcount[mumps->omp_comm_size-1]; 12513ab56b82SJunchao Zhang ierr = PetscMalloc(2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar),&irn);CHKERRQ(ierr); 12523ab56b82SJunchao Zhang jcn = irn + nz; 12533ab56b82SJunchao Zhang val = (PetscScalar*)(jcn + nz); 12543ab56b82SJunchao Zhang } 12553ab56b82SJunchao Zhang 12563ab56b82SJunchao Zhang /* save the gatherv plan */ 12573ab56b82SJunchao Zhang mumps->mpinz = mpinz; /* used as send count */ 12583ab56b82SJunchao Zhang mumps->recvcount = recvcount; 12593ab56b82SJunchao Zhang mumps->displs = displs; 12603ab56b82SJunchao Zhang 12613ab56b82SJunchao Zhang /* master gathers nonzeros */ 12623ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->irn,mpinz,MPIU_INT,irn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12633ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->jcn,mpinz,MPIU_INT,jcn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12643ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->val,mpinz,MPIU_SCALAR,val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12653ab56b82SJunchao Zhang 12663ab56b82SJunchao Zhang /* master frees its row/col/val and replaces them with bigger arrays */ 12673ab56b82SJunchao Zhang if (mumps->is_omp_master) { 12683ab56b82SJunchao Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); /* irn/jcn/val are allocated together so free only irn */ 12693ab56b82SJunchao Zhang mumps->nz = nz; /* it is a sum of mpinz over omp_comm */ 12703ab56b82SJunchao Zhang mumps->irn = irn; 12713ab56b82SJunchao Zhang mumps->jcn = jcn; 12723ab56b82SJunchao Zhang mumps->val = val; 12733ab56b82SJunchao Zhang } 12743ab56b82SJunchao Zhang } else { 12753ab56b82SJunchao Zhang ierr = MPI_Gatherv((mumps->is_omp_master?MPI_IN_PLACE:mumps->val),mumps->mpinz,MPIU_SCALAR,mumps->val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12763ab56b82SJunchao Zhang } 12773ab56b82SJunchao Zhang } 12783ab56b82SJunchao Zhang PetscFunctionReturn(0); 12793ab56b82SJunchao Zhang } 12803ab56b82SJunchao Zhang 12810481f469SBarry Smith PetscErrorCode MatFactorNumeric_MUMPS(Mat F,Mat A,const MatFactorInfo *info) 1282af281ebdSHong Zhang { 1283e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)(F)->data; 12846849ba73SBarry Smith PetscErrorCode ierr; 1285ace3abfcSBarry Smith PetscBool isMPIAIJ; 1286397b6df1SKris Buschelman 1287397b6df1SKris Buschelman PetscFunctionBegin; 12886baea169SHong Zhang if (mumps->id.INFOG(1) < 0) { 12892aca8efcSHong Zhang if (mumps->id.INFOG(1) == -6) { 12902aca8efcSHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called with singular matrix structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 12916baea169SHong Zhang } 12926baea169SHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called after analysis phase fails, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 12932aca8efcSHong Zhang PetscFunctionReturn(0); 12942aca8efcSHong Zhang } 12956baea169SHong Zhang 1296a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_REUSE_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 12973ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_REUSE_MATRIX,mumps);CHKERRQ(ierr); 1298397b6df1SKris Buschelman 1299397b6df1SKris Buschelman /* numerical factorization phase */ 1300329ec9b3SHong Zhang /*-------------------------------*/ 1301a5e57a09SHong Zhang mumps->id.job = JOB_FACTNUMERIC; 13024e34a73bSHong Zhang if (!mumps->id.ICNTL(18)) { /* A is centralized */ 1303a5e57a09SHong Zhang if (!mumps->myid) { 1304940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 1305397b6df1SKris Buschelman } 1306397b6df1SKris Buschelman } else { 1307940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 1308397b6df1SKris Buschelman } 13093ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1310a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) { 1311c0d63f2fSHong Zhang if (A->erroriffailure) { 1312c0d63f2fSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 1313151787a6SHong Zhang } else { 1314c0d63f2fSHong Zhang if (mumps->id.INFOG(1) == -10) { /* numerically singular matrix */ 13152aca8efcSHong Zhang ierr = PetscInfo2(F,"matrix is numerically singular, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1316603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 1317c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -13) { 1318c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, cannot allocate required memory %d megabytes\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1319603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 1320c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -8 || mumps->id.INFOG(1) == -9 || (-16 < mumps->id.INFOG(1) && mumps->id.INFOG(1) < -10) ) { 1321c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d, problem with workarray \n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1322603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 13232aca8efcSHong Zhang } else { 1324c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1325603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 1326151787a6SHong Zhang } 13272aca8efcSHong Zhang } 1328397b6df1SKris Buschelman } 1329a5e57a09SHong Zhang if (!mumps->myid && mumps->id.ICNTL(16) > 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB," mumps->id.ICNTL(16):=%d\n",mumps->id.INFOG(16)); 1330397b6df1SKris Buschelman 1331b3cb21ddSStefano Zampini F->assembled = PETSC_TRUE; 1332a5e57a09SHong Zhang mumps->matstruc = SAME_NONZERO_PATTERN; 1333b3cb21ddSStefano Zampini if (F->schur) { /* reset Schur status to unfactored */ 13343cb7dd0eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 13353cb7dd0eSStefano Zampini F->schur->valid_GPU_matrix = PETSC_OFFLOAD_CPU; 13363cb7dd0eSStefano Zampini #endif 1337b3cb21ddSStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 1338b3cb21ddSStefano Zampini mumps->id.ICNTL(19) = 2; 1339b3cb21ddSStefano Zampini ierr = MatTranspose(F->schur,MAT_INPLACE_MATRIX,&F->schur);CHKERRQ(ierr); 1340b3cb21ddSStefano Zampini } 1341b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,NULL,MAT_FACTOR_SCHUR_UNFACTORED);CHKERRQ(ierr); 1342b3cb21ddSStefano Zampini } 134367877ebaSShri Abhyankar 1344066565c5SStefano Zampini /* just to be sure that ICNTL(19) value returned by a call from MatMumpsGetIcntl is always consistent */ 1345066565c5SStefano Zampini if (!mumps->sym && mumps->id.ICNTL(19) && mumps->id.ICNTL(19) != 1) mumps->id.ICNTL(19) = 3; 1346066565c5SStefano Zampini 13473ab56b82SJunchao Zhang if (!mumps->is_omp_master) mumps->id.INFO(23) = 0; 13482d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 134967877ebaSShri Abhyankar PetscInt lsol_loc; 135067877ebaSShri Abhyankar PetscScalar *sol_loc; 13512205254eSKarl Rupp 1352c2093ab7SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&isMPIAIJ);CHKERRQ(ierr); 1353c2093ab7SHong Zhang 1354c2093ab7SHong Zhang /* distributed solution; Create x_seq=sol_loc for repeated use */ 1355c2093ab7SHong Zhang if (mumps->x_seq) { 1356c2093ab7SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 1357c2093ab7SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 1358c2093ab7SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 1359c2093ab7SHong Zhang } 1360a5e57a09SHong Zhang lsol_loc = mumps->id.INFO(23); /* length of sol_loc */ 1361dcca6d9dSJed Brown ierr = PetscMalloc2(lsol_loc,&sol_loc,lsol_loc,&mumps->id.isol_loc);CHKERRQ(ierr); 1362a5e57a09SHong Zhang mumps->id.lsol_loc = lsol_loc; 1363940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 1364a5e57a09SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,lsol_loc,sol_loc,&mumps->x_seq);CHKERRQ(ierr); 136567877ebaSShri Abhyankar } 13669880c9b4SStefano Zampini ierr = PetscLogFlops(mumps->id.RINFO(2));CHKERRQ(ierr); 1367397b6df1SKris Buschelman PetscFunctionReturn(0); 1368397b6df1SKris Buschelman } 1369397b6df1SKris Buschelman 13709a2535b5SHong Zhang /* Sets MUMPS options from the options database */ 13719a2535b5SHong Zhang PetscErrorCode PetscSetMUMPSFromOptions(Mat F, Mat A) 1372dcd589f8SShri Abhyankar { 1373e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1374dcd589f8SShri Abhyankar PetscErrorCode ierr; 1375a0e18203SThibaut Appel PetscInt icntl,info[80],i,ninfo=80; 1376ace3abfcSBarry Smith PetscBool flg; 1377dcd589f8SShri Abhyankar 1378dcd589f8SShri Abhyankar PetscFunctionBegin; 1379ce94432eSBarry Smith ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MUMPS Options","Mat");CHKERRQ(ierr); 13809a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_1","ICNTL(1): output stream for error messages","None",mumps->id.ICNTL(1),&icntl,&flg);CHKERRQ(ierr); 13819a2535b5SHong Zhang if (flg) mumps->id.ICNTL(1) = icntl; 13829a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_2","ICNTL(2): output stream for diagnostic printing, statistics, and warning","None",mumps->id.ICNTL(2),&icntl,&flg);CHKERRQ(ierr); 13839a2535b5SHong Zhang if (flg) mumps->id.ICNTL(2) = icntl; 13849a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_3","ICNTL(3): output stream for global information, collected on the host","None",mumps->id.ICNTL(3),&icntl,&flg);CHKERRQ(ierr); 13859a2535b5SHong Zhang if (flg) mumps->id.ICNTL(3) = icntl; 1386dcd589f8SShri Abhyankar 13879a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_4","ICNTL(4): level of printing (0 to 4)","None",mumps->id.ICNTL(4),&icntl,&flg);CHKERRQ(ierr); 13889a2535b5SHong Zhang if (flg) mumps->id.ICNTL(4) = icntl; 13899a2535b5SHong Zhang if (mumps->id.ICNTL(4) || PetscLogPrintInfo) mumps->id.ICNTL(3) = 6; /* resume MUMPS default id.ICNTL(3) = 6 */ 13909a2535b5SHong Zhang 1391d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_6","ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7)","None",mumps->id.ICNTL(6),&icntl,&flg);CHKERRQ(ierr); 13929a2535b5SHong Zhang if (flg) mumps->id.ICNTL(6) = icntl; 13939a2535b5SHong Zhang 1394d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_7","ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis","None",mumps->id.ICNTL(7),&icntl,&flg);CHKERRQ(ierr); 1395dcd589f8SShri Abhyankar if (flg) { 13962d4298aeSJunchao Zhang if (icntl== 1 && mumps->petsc_size > 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"pivot order be set by the user in PERM_IN -- not supported by the PETSc/MUMPS interface\n"); 13972205254eSKarl Rupp else mumps->id.ICNTL(7) = icntl; 1398dcd589f8SShri Abhyankar } 1399e0b74bf9SHong Zhang 14000298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_8","ICNTL(8): scaling strategy (-2 to 8 or 77)","None",mumps->id.ICNTL(8),&mumps->id.ICNTL(8),NULL);CHKERRQ(ierr); 1401d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_9","ICNTL(9): computes the solution using A or A^T","None",mumps->id.ICNTL(9),&mumps->id.ICNTL(9),NULL);CHKERRQ(ierr); handled by MatSolveTranspose_MUMPS() */ 14020298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_10","ICNTL(10): max num of refinements","None",mumps->id.ICNTL(10),&mumps->id.ICNTL(10),NULL);CHKERRQ(ierr); 1403d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_11","ICNTL(11): statistics related to an error analysis (via -ksp_view)","None",mumps->id.ICNTL(11),&mumps->id.ICNTL(11),NULL);CHKERRQ(ierr); 1404d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_12","ICNTL(12): an ordering strategy for symmetric matrices (0 to 3)","None",mumps->id.ICNTL(12),&mumps->id.ICNTL(12),NULL);CHKERRQ(ierr); 1405d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_13","ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting","None",mumps->id.ICNTL(13),&mumps->id.ICNTL(13),NULL);CHKERRQ(ierr); 1406d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_14","ICNTL(14): percentage increase in the estimated working space","None",mumps->id.ICNTL(14),&mumps->id.ICNTL(14),NULL);CHKERRQ(ierr); 1407d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_19","ICNTL(19): computes the Schur complement","None",mumps->id.ICNTL(19),&mumps->id.ICNTL(19),NULL);CHKERRQ(ierr); 140859ac8732SStefano Zampini if (mumps->id.ICNTL(19) <= 0 || mumps->id.ICNTL(19) > 3) { /* reset any schur data (if any) */ 1409b3cb21ddSStefano Zampini ierr = MatDestroy(&F->schur);CHKERRQ(ierr); 141059ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 141159ac8732SStefano Zampini } 14124e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_20","ICNTL(20): the format (dense or sparse) of the right-hand sides","None",mumps->id.ICNTL(20),&mumps->id.ICNTL(20),NULL);CHKERRQ(ierr); -- sparse rhs is not supported in PETSc API */ 1413d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_21","ICNTL(21): the distribution (centralized or distributed) of the solution vectors","None",mumps->id.ICNTL(21),&mumps->id.ICNTL(21),NULL);CHKERRQ(ierr); we only use distributed solution vector */ 14149a2535b5SHong Zhang 1415d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_22","ICNTL(22): in-core/out-of-core factorization and solve (0 or 1)","None",mumps->id.ICNTL(22),&mumps->id.ICNTL(22),NULL);CHKERRQ(ierr); 14160298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_23","ICNTL(23): max size of the working memory (MB) that can allocate per processor","None",mumps->id.ICNTL(23),&mumps->id.ICNTL(23),NULL);CHKERRQ(ierr); 14170298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_24","ICNTL(24): detection of null pivot rows (0 or 1)","None",mumps->id.ICNTL(24),&mumps->id.ICNTL(24),NULL);CHKERRQ(ierr); 14189a2535b5SHong Zhang if (mumps->id.ICNTL(24)) { 14199a2535b5SHong Zhang mumps->id.ICNTL(13) = 1; /* turn-off ScaLAPACK to help with the correct detection of null pivots */ 1420d7ebd59bSHong Zhang } 1421d7ebd59bSHong Zhang 1422b4ed93dbSHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_25","ICNTL(25): computes a solution of a deficient matrix and a null space basis","None",mumps->id.ICNTL(25),&mumps->id.ICNTL(25),NULL);CHKERRQ(ierr); 1423d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_26","ICNTL(26): drives the solution phase if a Schur complement matrix","None",mumps->id.ICNTL(26),&mumps->id.ICNTL(26),NULL);CHKERRQ(ierr); 14242cd7d884SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_27","ICNTL(27): the blocking size for multiple right-hand sides","None",mumps->id.ICNTL(27),&mumps->id.ICNTL(27),NULL);CHKERRQ(ierr); 14250298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_28","ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering","None",mumps->id.ICNTL(28),&mumps->id.ICNTL(28),NULL);CHKERRQ(ierr); 1426d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_29","ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis","None",mumps->id.ICNTL(29),&mumps->id.ICNTL(29),NULL);CHKERRQ(ierr); 142789a9c03aSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_30","ICNTL(30): compute user-specified set of entries in inv(A)","None",mumps->id.ICNTL(30),&mumps->id.ICNTL(30),NULL);CHKERRQ(ierr); */ /* call MatMumpsGetInverse() directly */ 1428d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_31","ICNTL(31): indicates which factors may be discarded during factorization","None",mumps->id.ICNTL(31),&mumps->id.ICNTL(31),NULL);CHKERRQ(ierr); 14294e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_32","ICNTL(32): performs the forward elemination of the right-hand sides during factorization","None",mumps->id.ICNTL(32),&mumps->id.ICNTL(32),NULL);CHKERRQ(ierr); -- not supported by PETSc API */ 14300298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_33","ICNTL(33): compute determinant","None",mumps->id.ICNTL(33),&mumps->id.ICNTL(33),NULL);CHKERRQ(ierr); 1431a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_35","ICNTL(35): activates Block Low Rank (BLR) based factorization","None",mumps->id.ICNTL(35),&mumps->id.ICNTL(35),NULL);CHKERRQ(ierr); 1432a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_36","ICNTL(36): choice of BLR factorization variant","None",mumps->id.ICNTL(36),&mumps->id.ICNTL(36),NULL);CHKERRQ(ierr); 1433a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_38","ICNTL(38): estimated compression rate of LU factors with BLR","None",mumps->id.ICNTL(38),&mumps->id.ICNTL(38),NULL);CHKERRQ(ierr); 1434dcd589f8SShri Abhyankar 14350298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr); 14360298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr); 14370298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr); 14380298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr); 14390298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_5","CNTL(5): fixation for null pivots","None",mumps->id.CNTL(5),&mumps->id.CNTL(5),NULL);CHKERRQ(ierr); 1440b4ed93dbSHong Zhang ierr = PetscOptionsReal("-mat_mumps_cntl_7","CNTL(7): dropping parameter used during BLR","None",mumps->id.CNTL(7),&mumps->id.CNTL(7),NULL);CHKERRQ(ierr); 1441e5bb22a1SHong Zhang 14422a808120SBarry Smith ierr = PetscOptionsString("-mat_mumps_ooc_tmpdir", "out of core directory", "None", mumps->id.ooc_tmpdir, mumps->id.ooc_tmpdir, 256, NULL);CHKERRQ(ierr); 1443b34f08ffSHong Zhang 144416d797efSHong Zhang ierr = PetscOptionsIntArray("-mat_mumps_view_info","request INFO local to each processor","",info,&ninfo,NULL);CHKERRQ(ierr); 1445b34f08ffSHong Zhang if (ninfo) { 1446a0e18203SThibaut Appel if (ninfo > 80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"number of INFO %d must <= 80\n",ninfo); 1447b34f08ffSHong Zhang ierr = PetscMalloc1(ninfo,&mumps->info);CHKERRQ(ierr); 1448b34f08ffSHong Zhang mumps->ninfo = ninfo; 1449b34f08ffSHong Zhang for (i=0; i<ninfo; i++) { 1450a0e18203SThibaut Appel if (info[i] < 0 || info[i]>80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"index of INFO %d must between 1 and 80\n",ninfo); 14512a808120SBarry Smith else mumps->info[i] = info[i]; 1452b34f08ffSHong Zhang } 1453b34f08ffSHong Zhang } 1454b34f08ffSHong Zhang 14552a808120SBarry Smith ierr = PetscOptionsEnd();CHKERRQ(ierr); 1456dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1457dcd589f8SShri Abhyankar } 1458dcd589f8SShri Abhyankar 1459f697e70eSHong Zhang PetscErrorCode PetscInitializeMUMPS(Mat A,Mat_MUMPS *mumps) 1460dcd589f8SShri Abhyankar { 1461dcd589f8SShri Abhyankar PetscErrorCode ierr; 14627c405c4aSJunchao Zhang PetscInt nthreads=0; 1463dcd589f8SShri Abhyankar 1464dcd589f8SShri Abhyankar PetscFunctionBegin; 14653ab56b82SJunchao Zhang mumps->petsc_comm = PetscObjectComm((PetscObject)A); 14663ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->petsc_comm,&mumps->petsc_size);CHKERRQ(ierr); 14673ab56b82SJunchao Zhang ierr = MPI_Comm_rank(mumps->petsc_comm,&mumps->myid);CHKERRQ(ierr); /* so that code like "if (!myid)" still works even if mumps_comm is different */ 14683ab56b82SJunchao Zhang 14697c405c4aSJunchao Zhang ierr = PetscOptionsHasName(NULL,NULL,"-mat_mumps_use_omp_threads",&mumps->use_petsc_omp_support);CHKERRQ(ierr); 14707c405c4aSJunchao Zhang if (mumps->use_petsc_omp_support) nthreads = -1; /* -1 will let PetscOmpCtrlCreate() guess a proper value when user did not supply one */ 14717c405c4aSJunchao Zhang ierr = PetscOptionsGetInt(NULL,NULL,"-mat_mumps_use_omp_threads",&nthreads,NULL);CHKERRQ(ierr); 14723ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { 14733ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 14743ab56b82SJunchao Zhang ierr = PetscOmpCtrlCreate(mumps->petsc_comm,nthreads,&mumps->omp_ctrl);CHKERRQ(ierr); 14753ab56b82SJunchao Zhang ierr = PetscOmpCtrlGetOmpComms(mumps->omp_ctrl,&mumps->omp_comm,&mumps->mumps_comm,&mumps->is_omp_master);CHKERRQ(ierr); 14763ab56b82SJunchao Zhang #else 1477217d3b1eSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP_SYS,"the system does not have PETSc OpenMP support but you added the -mat_mumps_use_omp_threads option. Configure PETSc with --with-openmp --download-hwloc (or --with-hwloc) to enable it, see more in MATSOLVERMUMPS manual\n"); 14783ab56b82SJunchao Zhang #endif 14793ab56b82SJunchao Zhang } else { 14803ab56b82SJunchao Zhang mumps->omp_comm = PETSC_COMM_SELF; 14813ab56b82SJunchao Zhang mumps->mumps_comm = mumps->petsc_comm; 14823ab56b82SJunchao Zhang mumps->is_omp_master = PETSC_TRUE; 14833ab56b82SJunchao Zhang } 14843ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->omp_comm,&mumps->omp_comm_size);CHKERRQ(ierr); 14852205254eSKarl Rupp 14862d4298aeSJunchao Zhang mumps->id.comm_fortran = MPI_Comm_c2f(mumps->mumps_comm); 1487f697e70eSHong Zhang mumps->id.job = JOB_INIT; 1488f697e70eSHong Zhang mumps->id.par = 1; /* host participates factorizaton and solve */ 1489f697e70eSHong Zhang mumps->id.sym = mumps->sym; 14903ab56b82SJunchao Zhang 14913ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 14923ab56b82SJunchao Zhang 14933ab56b82SJunchao Zhang /* copy MUMPS default control values from master to slaves. Although slaves do not call MUMPS, they may access these values in code. 14943ab56b82SJunchao Zhang For example, ICNTL(9) is initialized to 1 by MUMPS and slaves check ICNTL(9) in MatSolve_MUMPS. 14953ab56b82SJunchao Zhang */ 1496a0e18203SThibaut Appel ierr = MPI_Bcast(mumps->id.icntl,60,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 Manual Section 9 */ 14973ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.cntl, 15,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 1498f697e70eSHong Zhang 14990298fd71SBarry Smith mumps->scat_rhs = NULL; 15000298fd71SBarry Smith mumps->scat_sol = NULL; 15019a2535b5SHong Zhang 150270544d5fSHong Zhang /* set PETSc-MUMPS default options - override MUMPS default */ 15039a2535b5SHong Zhang mumps->id.ICNTL(3) = 0; 15049a2535b5SHong Zhang mumps->id.ICNTL(4) = 0; 15052d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 15069a2535b5SHong Zhang mumps->id.ICNTL(18) = 0; /* centralized assembled matrix input */ 15079a2535b5SHong Zhang } else { 15089a2535b5SHong Zhang mumps->id.ICNTL(18) = 3; /* distributed assembled matrix input */ 15094e34a73bSHong Zhang mumps->id.ICNTL(20) = 0; /* rhs is in dense format */ 151070544d5fSHong Zhang mumps->id.ICNTL(21) = 1; /* distributed solution */ 15119a2535b5SHong Zhang } 15126444a565SStefano Zampini 15136444a565SStefano Zampini /* schur */ 15146444a565SStefano Zampini mumps->id.size_schur = 0; 15156444a565SStefano Zampini mumps->id.listvar_schur = NULL; 15166444a565SStefano Zampini mumps->id.schur = NULL; 1517b5fa320bSStefano Zampini mumps->sizeredrhs = 0; 151859ac8732SStefano Zampini mumps->schur_sol = NULL; 151959ac8732SStefano Zampini mumps->schur_sizesol = 0; 1520dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1521dcd589f8SShri Abhyankar } 1522dcd589f8SShri Abhyankar 15239a625307SHong Zhang PetscErrorCode MatFactorSymbolic_MUMPS_ReportIfError(Mat F,Mat A,const MatFactorInfo *info,Mat_MUMPS *mumps) 15245cd7cf9dSHong Zhang { 15255cd7cf9dSHong Zhang PetscErrorCode ierr; 15265cd7cf9dSHong Zhang 15275cd7cf9dSHong Zhang PetscFunctionBegin; 1528a0e18203SThibaut Appel ierr = MPI_Bcast(mumps->id.infog, 80,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 manual p82 */ 15293ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.rinfog,20,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 15305cd7cf9dSHong Zhang if (mumps->id.INFOG(1) < 0) { 15315cd7cf9dSHong Zhang if (A->erroriffailure) { 15325cd7cf9dSHong Zhang SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in analysis phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 15335cd7cf9dSHong Zhang } else { 15345cd7cf9dSHong Zhang if (mumps->id.INFOG(1) == -6) { 15355cd7cf9dSHong Zhang ierr = PetscInfo2(F,"matrix is singular in structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1536603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_STRUCT_ZEROPIVOT; 15375cd7cf9dSHong Zhang } else if (mumps->id.INFOG(1) == -5 || mumps->id.INFOG(1) == -7) { 15385cd7cf9dSHong Zhang ierr = PetscInfo2(F,"problem of workspace, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1539603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 15405cd7cf9dSHong Zhang } else { 15415cd7cf9dSHong Zhang ierr = PetscInfo2(F,"Error reported by MUMPS in analysis phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1542603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 15435cd7cf9dSHong Zhang } 15445cd7cf9dSHong Zhang } 15455cd7cf9dSHong Zhang } 15465cd7cf9dSHong Zhang PetscFunctionReturn(0); 15475cd7cf9dSHong Zhang } 15485cd7cf9dSHong Zhang 1549a5e57a09SHong Zhang /* Note Petsc r(=c) permutation is used when mumps->id.ICNTL(7)==1 with centralized assembled matrix input; otherwise r and c are ignored */ 15500481f469SBarry Smith PetscErrorCode MatLUFactorSymbolic_AIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1551b24902e0SBarry Smith { 1552e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1553dcd589f8SShri Abhyankar PetscErrorCode ierr; 155467877ebaSShri Abhyankar Vec b; 155567877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1556397b6df1SKris Buschelman 1557397b6df1SKris Buschelman PetscFunctionBegin; 1558a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1559dcd589f8SShri Abhyankar 15609a2535b5SHong Zhang /* Set MUMPS options from the options database */ 15619a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1562dcd589f8SShri Abhyankar 1563a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 15643ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1565dcd589f8SShri Abhyankar 156667877ebaSShri Abhyankar /* analysis phase */ 156767877ebaSShri Abhyankar /*----------------*/ 1568a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1569a5e57a09SHong Zhang mumps->id.n = M; 1570a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 157167877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1572a5e57a09SHong Zhang if (!mumps->myid) { 1573a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1574a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1575940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 157667877ebaSShri Abhyankar } 1577a5e57a09SHong Zhang if (mumps->id.ICNTL(7) == 1) { /* use user-provide matrix ordering - assuming r = c ordering */ 15785248a706SHong Zhang /* 15795248a706SHong Zhang PetscBool flag; 15805248a706SHong Zhang ierr = ISEqual(r,c,&flag);CHKERRQ(ierr); 15815248a706SHong Zhang if (!flag) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"row_perm != col_perm"); 15825248a706SHong Zhang ierr = ISView(r,PETSC_VIEWER_STDOUT_SELF); 15835248a706SHong Zhang */ 1584a5e57a09SHong Zhang if (!mumps->myid) { 1585e0b74bf9SHong Zhang const PetscInt *idx; 1586e0b74bf9SHong Zhang PetscInt i,*perm_in; 15872205254eSKarl Rupp 1588785e854fSJed Brown ierr = PetscMalloc1(M,&perm_in);CHKERRQ(ierr); 1589e0b74bf9SHong Zhang ierr = ISGetIndices(r,&idx);CHKERRQ(ierr); 15902205254eSKarl Rupp 1591a5e57a09SHong Zhang mumps->id.perm_in = perm_in; 1592e0b74bf9SHong Zhang for (i=0; i<M; i++) perm_in[i] = idx[i]+1; /* perm_in[]: start from 1, not 0! */ 1593e0b74bf9SHong Zhang ierr = ISRestoreIndices(r,&idx);CHKERRQ(ierr); 1594e0b74bf9SHong Zhang } 1595e0b74bf9SHong Zhang } 159667877ebaSShri Abhyankar } 159767877ebaSShri Abhyankar break; 159867877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1599a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1600a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1601a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1602940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 160367877ebaSShri Abhyankar } 160467877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 16052a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 160694b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 16076bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 160867877ebaSShri Abhyankar break; 160967877ebaSShri Abhyankar } 16103ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 16115cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 161267877ebaSShri Abhyankar 1613719d5645SBarry Smith F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1614dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 161551d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 16164e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 1617eb3ef3b2SHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 1618b24902e0SBarry Smith PetscFunctionReturn(0); 1619b24902e0SBarry Smith } 1620b24902e0SBarry Smith 1621450b117fSShri Abhyankar /* Note the Petsc r and c permutations are ignored */ 1622450b117fSShri Abhyankar PetscErrorCode MatLUFactorSymbolic_BAIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1623450b117fSShri Abhyankar { 1624e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1625dcd589f8SShri Abhyankar PetscErrorCode ierr; 162667877ebaSShri Abhyankar Vec b; 162767877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1628450b117fSShri Abhyankar 1629450b117fSShri Abhyankar PetscFunctionBegin; 1630a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1631dcd589f8SShri Abhyankar 16329a2535b5SHong Zhang /* Set MUMPS options from the options database */ 16339a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1634dcd589f8SShri Abhyankar 1635a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 16363ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 163767877ebaSShri Abhyankar 163867877ebaSShri Abhyankar /* analysis phase */ 163967877ebaSShri Abhyankar /*----------------*/ 1640a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1641a5e57a09SHong Zhang mumps->id.n = M; 1642a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 164367877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1644a5e57a09SHong Zhang if (!mumps->myid) { 1645a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1646a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1647940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 164867877ebaSShri Abhyankar } 164967877ebaSShri Abhyankar } 165067877ebaSShri Abhyankar break; 165167877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1652a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1653a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1654a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1655940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 165667877ebaSShri Abhyankar } 165767877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 16582a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 165994b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 16606bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 166167877ebaSShri Abhyankar break; 166267877ebaSShri Abhyankar } 16633ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 16645cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 166567877ebaSShri Abhyankar 1666450b117fSShri Abhyankar F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1667dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 166851d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 1669450b117fSShri Abhyankar PetscFunctionReturn(0); 1670450b117fSShri Abhyankar } 1671b24902e0SBarry Smith 1672141f4205SHong Zhang /* Note the Petsc r permutation and factor info are ignored */ 167367877ebaSShri Abhyankar PetscErrorCode MatCholeskyFactorSymbolic_MUMPS(Mat F,Mat A,IS r,const MatFactorInfo *info) 1674b24902e0SBarry Smith { 1675e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1676dcd589f8SShri Abhyankar PetscErrorCode ierr; 167767877ebaSShri Abhyankar Vec b; 167867877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1679397b6df1SKris Buschelman 1680397b6df1SKris Buschelman PetscFunctionBegin; 1681a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1682dcd589f8SShri Abhyankar 16839a2535b5SHong Zhang /* Set MUMPS options from the options database */ 16849a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1685dcd589f8SShri Abhyankar 1686a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 16873ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1688dcd589f8SShri Abhyankar 168967877ebaSShri Abhyankar /* analysis phase */ 169067877ebaSShri Abhyankar /*----------------*/ 1691a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1692a5e57a09SHong Zhang mumps->id.n = M; 1693a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 169467877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1695a5e57a09SHong Zhang if (!mumps->myid) { 1696a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1697a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1698940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 169967877ebaSShri Abhyankar } 170067877ebaSShri Abhyankar } 170167877ebaSShri Abhyankar break; 170267877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1703a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1704a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1705a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1706940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 170767877ebaSShri Abhyankar } 170867877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 17092a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 171094b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 17116bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 171267877ebaSShri Abhyankar break; 171367877ebaSShri Abhyankar } 17143ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 17155cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 17165cd7cf9dSHong Zhang 17172792810eSHong Zhang F->ops->choleskyfactornumeric = MatFactorNumeric_MUMPS; 1718dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 171951d5961aSHong Zhang F->ops->solvetranspose = MatSolve_MUMPS; 17204e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 172123a5080aSHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 17224e34a73bSHong Zhang #if defined(PETSC_USE_COMPLEX) 17230298fd71SBarry Smith F->ops->getinertia = NULL; 17244e34a73bSHong Zhang #else 17254e34a73bSHong Zhang F->ops->getinertia = MatGetInertia_SBAIJMUMPS; 1726db4efbfdSBarry Smith #endif 1727b24902e0SBarry Smith PetscFunctionReturn(0); 1728b24902e0SBarry Smith } 1729b24902e0SBarry Smith 173064e6c443SBarry Smith PetscErrorCode MatView_MUMPS(Mat A,PetscViewer viewer) 173174ed9c26SBarry Smith { 1732f6c57405SHong Zhang PetscErrorCode ierr; 173364e6c443SBarry Smith PetscBool iascii; 173464e6c443SBarry Smith PetscViewerFormat format; 1735e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 1736f6c57405SHong Zhang 1737f6c57405SHong Zhang PetscFunctionBegin; 173864e6c443SBarry Smith /* check if matrix is mumps type */ 173964e6c443SBarry Smith if (A->ops->solve != MatSolve_MUMPS) PetscFunctionReturn(0); 174064e6c443SBarry Smith 1741251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 174264e6c443SBarry Smith if (iascii) { 174364e6c443SBarry Smith ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 174464e6c443SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO) { 174564e6c443SBarry Smith ierr = PetscViewerASCIIPrintf(viewer,"MUMPS run parameters:\n");CHKERRQ(ierr); 1746a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," SYM (matrix type): %d \n",mumps->id.sym);CHKERRQ(ierr); 1747a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," PAR (host participation): %d \n",mumps->id.par);CHKERRQ(ierr); 1748a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(1) (output for error): %d \n",mumps->id.ICNTL(1));CHKERRQ(ierr); 1749a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(2) (output of diagnostic msg): %d \n",mumps->id.ICNTL(2));CHKERRQ(ierr); 1750a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(3) (output for global info): %d \n",mumps->id.ICNTL(3));CHKERRQ(ierr); 1751a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(4) (level of printing): %d \n",mumps->id.ICNTL(4));CHKERRQ(ierr); 1752a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(5) (input mat struct): %d \n",mumps->id.ICNTL(5));CHKERRQ(ierr); 1753a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(6) (matrix prescaling): %d \n",mumps->id.ICNTL(6));CHKERRQ(ierr); 1754d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(7) (sequential matrix ordering):%d \n",mumps->id.ICNTL(7));CHKERRQ(ierr); 1755d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(8) (scaling strategy): %d \n",mumps->id.ICNTL(8));CHKERRQ(ierr); 1756a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(10) (max num of refinements): %d \n",mumps->id.ICNTL(10));CHKERRQ(ierr); 1757a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(11) (error analysis): %d \n",mumps->id.ICNTL(11));CHKERRQ(ierr); 1758a5e57a09SHong Zhang if (mumps->id.ICNTL(11)>0) { 1759a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(4) (inf norm of input mat): %g\n",mumps->id.RINFOG(4));CHKERRQ(ierr); 1760a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(5) (inf norm of solution): %g\n",mumps->id.RINFOG(5));CHKERRQ(ierr); 1761a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(6) (inf norm of residual): %g\n",mumps->id.RINFOG(6));CHKERRQ(ierr); 1762a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(7),RINFOG(8) (backward error est): %g, %g\n",mumps->id.RINFOG(7),mumps->id.RINFOG(8));CHKERRQ(ierr); 1763a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(9) (error estimate): %g \n",mumps->id.RINFOG(9));CHKERRQ(ierr); 1764a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(10),RINFOG(11)(condition numbers): %g, %g\n",mumps->id.RINFOG(10),mumps->id.RINFOG(11));CHKERRQ(ierr); 1765f6c57405SHong Zhang } 1766a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(12) (efficiency control): %d \n",mumps->id.ICNTL(12));CHKERRQ(ierr); 1767a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(13) (efficiency control): %d \n",mumps->id.ICNTL(13));CHKERRQ(ierr); 1768a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(14) (percentage of estimated workspace increase): %d \n",mumps->id.ICNTL(14));CHKERRQ(ierr); 1769f6c57405SHong Zhang /* ICNTL(15-17) not used */ 1770a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(18) (input mat struct): %d \n",mumps->id.ICNTL(18));CHKERRQ(ierr); 1771d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(19) (Schur complement info): %d \n",mumps->id.ICNTL(19));CHKERRQ(ierr); 1772a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(20) (rhs sparse pattern): %d \n",mumps->id.ICNTL(20));CHKERRQ(ierr); 1773ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," ICNTL(21) (solution struct): %d \n",mumps->id.ICNTL(21));CHKERRQ(ierr); 1774a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(22) (in-core/out-of-core facility): %d \n",mumps->id.ICNTL(22));CHKERRQ(ierr); 1775a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(23) (max size of memory can be allocated locally):%d \n",mumps->id.ICNTL(23));CHKERRQ(ierr); 1776c0165424SHong Zhang 1777a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(24) (detection of null pivot rows): %d \n",mumps->id.ICNTL(24));CHKERRQ(ierr); 1778a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(25) (computation of a null space basis): %d \n",mumps->id.ICNTL(25));CHKERRQ(ierr); 1779a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(26) (Schur options for rhs or solution): %d \n",mumps->id.ICNTL(26));CHKERRQ(ierr); 1780a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(27) (experimental parameter): %d \n",mumps->id.ICNTL(27));CHKERRQ(ierr); 1781a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(28) (use parallel or sequential ordering): %d \n",mumps->id.ICNTL(28));CHKERRQ(ierr); 1782a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(29) (parallel ordering): %d \n",mumps->id.ICNTL(29));CHKERRQ(ierr); 178342179a6aSHong Zhang 1784a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(30) (user-specified set of entries in inv(A)): %d \n",mumps->id.ICNTL(30));CHKERRQ(ierr); 1785a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(31) (factors is discarded in the solve phase): %d \n",mumps->id.ICNTL(31));CHKERRQ(ierr); 1786a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(33) (compute determinant): %d \n",mumps->id.ICNTL(33));CHKERRQ(ierr); 17876e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(35) (activate BLR based factorization): %d \n",mumps->id.ICNTL(35));CHKERRQ(ierr); 1788a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(36) (choice of BLR factorization variant): %d \n",mumps->id.ICNTL(36));CHKERRQ(ierr); 1789a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(38) (estimated compression rate of LU factors): %d \n",mumps->id.ICNTL(38));CHKERRQ(ierr); 1790f6c57405SHong Zhang 1791a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(1) (relative pivoting threshold): %g \n",mumps->id.CNTL(1));CHKERRQ(ierr); 1792a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(2) (stopping criterion of refinement): %g \n",mumps->id.CNTL(2));CHKERRQ(ierr); 1793ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(3) (absolute pivoting threshold): %g \n",mumps->id.CNTL(3));CHKERRQ(ierr); 1794ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(4) (value of static pivoting): %g \n",mumps->id.CNTL(4));CHKERRQ(ierr); 1795a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(5) (fixation for null pivots): %g \n",mumps->id.CNTL(5));CHKERRQ(ierr); 17966e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(7) (dropping parameter for BLR): %g \n",mumps->id.CNTL(7));CHKERRQ(ierr); 1797f6c57405SHong Zhang 1798f6c57405SHong Zhang /* infomation local to each processor */ 179934ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(1) (local estimated flops for the elimination after analysis): \n");CHKERRQ(ierr); 18001575c14dSBarry Smith ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr); 1801a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(1));CHKERRQ(ierr); 18022a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 180334ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(2) (local estimated flops for the assembly after factorization): \n");CHKERRQ(ierr); 1804a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(2));CHKERRQ(ierr); 18052a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 180634ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(3) (local estimated flops for the elimination after factorization): \n");CHKERRQ(ierr); 1807a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(3));CHKERRQ(ierr); 18082a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1809f6c57405SHong Zhang 181034ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(15) (estimated size of (in MB) MUMPS internal data for running numerical factorization): \n");CHKERRQ(ierr); 1811a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(15));CHKERRQ(ierr); 18122a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1813f6c57405SHong Zhang 181434ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(16) (size of (in MB) MUMPS internal data used during numerical factorization): \n");CHKERRQ(ierr); 1815a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(16));CHKERRQ(ierr); 18162a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1817f6c57405SHong Zhang 181834ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(23) (num of pivots eliminated on this processor after factorization): \n");CHKERRQ(ierr); 1819a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(23));CHKERRQ(ierr); 18202a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1821b34f08ffSHong Zhang 1822a0e18203SThibaut Appel if (mumps->ninfo && mumps->ninfo <= 80){ 1823b34f08ffSHong Zhang PetscInt i; 1824b34f08ffSHong Zhang for (i=0; i<mumps->ninfo; i++){ 1825b34f08ffSHong Zhang ierr = PetscViewerASCIIPrintf(viewer, " INFO(%d): \n",mumps->info[i]);CHKERRQ(ierr); 1826b34f08ffSHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(mumps->info[i]));CHKERRQ(ierr); 18272a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1828b34f08ffSHong Zhang } 1829b34f08ffSHong Zhang } 18301575c14dSBarry Smith ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr); 1831f6c57405SHong Zhang 1832a5e57a09SHong Zhang if (!mumps->myid) { /* information from the host */ 1833a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(1) (global estimated flops for the elimination after analysis): %g \n",mumps->id.RINFOG(1));CHKERRQ(ierr); 1834a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(2) (global estimated flops for the assembly after factorization): %g \n",mumps->id.RINFOG(2));CHKERRQ(ierr); 1835a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(3) (global estimated flops for the elimination after factorization): %g \n",mumps->id.RINFOG(3));CHKERRQ(ierr); 1836a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," (RINFOG(12) RINFOG(13))*2^INFOG(34) (determinant): (%g,%g)*(2^%d)\n",mumps->id.RINFOG(12),mumps->id.RINFOG(13),mumps->id.INFOG(34));CHKERRQ(ierr); 1837f6c57405SHong Zhang 1838a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(3) (estimated real workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(3));CHKERRQ(ierr); 1839a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(4) (estimated integer workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(4));CHKERRQ(ierr); 1840a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(5) (estimated maximum front size in the complete tree): %d \n",mumps->id.INFOG(5));CHKERRQ(ierr); 1841a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(6) (number of nodes in the complete tree): %d \n",mumps->id.INFOG(6));CHKERRQ(ierr); 1842a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(7) (ordering option effectively use after analysis): %d \n",mumps->id.INFOG(7));CHKERRQ(ierr); 1843a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(8) (structural symmetry in percent of the permuted matrix after analysis): %d \n",mumps->id.INFOG(8));CHKERRQ(ierr); 1844a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(9) (total real/complex workspace to store the matrix factors after factorization): %d \n",mumps->id.INFOG(9));CHKERRQ(ierr); 1845a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(10) (total integer space store the matrix factors after factorization): %d \n",mumps->id.INFOG(10));CHKERRQ(ierr); 1846a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(11) (order of largest frontal matrix after factorization): %d \n",mumps->id.INFOG(11));CHKERRQ(ierr); 1847a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(12) (number of off-diagonal pivots): %d \n",mumps->id.INFOG(12));CHKERRQ(ierr); 1848a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(13) (number of delayed pivots after factorization): %d \n",mumps->id.INFOG(13));CHKERRQ(ierr); 1849a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(14) (number of memory compress after factorization): %d \n",mumps->id.INFOG(14));CHKERRQ(ierr); 1850a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(15) (number of steps of iterative refinement after solution): %d \n",mumps->id.INFOG(15));CHKERRQ(ierr); 1851a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(16) (estimated size (in MB) of all MUMPS internal data for factorization after analysis: value on the most memory consuming processor): %d \n",mumps->id.INFOG(16));CHKERRQ(ierr); 1852a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(17) (estimated size of all MUMPS internal data for factorization after analysis: sum over all processors): %d \n",mumps->id.INFOG(17));CHKERRQ(ierr); 1853a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(18) (size of all MUMPS internal data allocated during factorization: value on the most memory consuming processor): %d \n",mumps->id.INFOG(18));CHKERRQ(ierr); 1854a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(19) (size of all MUMPS internal data allocated during factorization: sum over all processors): %d \n",mumps->id.INFOG(19));CHKERRQ(ierr); 1855a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(20) (estimated number of entries in the factors): %d \n",mumps->id.INFOG(20));CHKERRQ(ierr); 1856a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(21) (size in MB of memory effectively used during factorization - value on the most memory consuming processor): %d \n",mumps->id.INFOG(21));CHKERRQ(ierr); 1857a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(22) (size in MB of memory effectively used during factorization - sum over all processors): %d \n",mumps->id.INFOG(22));CHKERRQ(ierr); 1858a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(23) (after analysis: value of ICNTL(6) effectively used): %d \n",mumps->id.INFOG(23));CHKERRQ(ierr); 1859a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(24) (after analysis: value of ICNTL(12) effectively used): %d \n",mumps->id.INFOG(24));CHKERRQ(ierr); 1860a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(25) (after factorization: number of pivots modified by static pivoting): %d \n",mumps->id.INFOG(25));CHKERRQ(ierr); 186140d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(28) (after factorization: number of null pivots encountered): %d\n",mumps->id.INFOG(28));CHKERRQ(ierr); 186240d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(29) (after factorization: effective number of entries in the factors (sum over all processors)): %d\n",mumps->id.INFOG(29));CHKERRQ(ierr); 186340d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(30, 31) (after solution: size in Mbytes of memory used during solution phase): %d, %d\n",mumps->id.INFOG(30),mumps->id.INFOG(31));CHKERRQ(ierr); 186440d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(32) (after analysis: type of analysis done): %d\n",mumps->id.INFOG(32));CHKERRQ(ierr); 186540d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(33) (value used for ICNTL(8)): %d\n",mumps->id.INFOG(33));CHKERRQ(ierr); 186640d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(34) (exponent of the determinant if determinant is requested): %d\n",mumps->id.INFOG(34));CHKERRQ(ierr); 1867a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(35) (after factorization: number of entries taking into account BLR factor compression - sum over all processors): %d\n",mumps->id.INFOG(35));CHKERRQ(ierr); 1868a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(36) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(36));CHKERRQ(ierr); 1869a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(37) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - sum over all processors): %d \n",mumps->id.INFOG(37));CHKERRQ(ierr); 1870a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(38) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(38));CHKERRQ(ierr); 1871a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(39) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - sum over all processors): %d \n",mumps->id.INFOG(39));CHKERRQ(ierr); 1872f6c57405SHong Zhang } 1873f6c57405SHong Zhang } 1874cb828f0fSHong Zhang } 1875f6c57405SHong Zhang PetscFunctionReturn(0); 1876f6c57405SHong Zhang } 1877f6c57405SHong Zhang 187835bd34faSBarry Smith PetscErrorCode MatGetInfo_MUMPS(Mat A,MatInfoType flag,MatInfo *info) 187935bd34faSBarry Smith { 1880e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)A->data; 188135bd34faSBarry Smith 188235bd34faSBarry Smith PetscFunctionBegin; 188335bd34faSBarry Smith info->block_size = 1.0; 1884cb828f0fSHong Zhang info->nz_allocated = mumps->id.INFOG(20); 1885cb828f0fSHong Zhang info->nz_used = mumps->id.INFOG(20); 188635bd34faSBarry Smith info->nz_unneeded = 0.0; 188735bd34faSBarry Smith info->assemblies = 0.0; 188835bd34faSBarry Smith info->mallocs = 0.0; 188935bd34faSBarry Smith info->memory = 0.0; 189035bd34faSBarry Smith info->fill_ratio_given = 0; 189135bd34faSBarry Smith info->fill_ratio_needed = 0; 189235bd34faSBarry Smith info->factor_mallocs = 0; 189335bd34faSBarry Smith PetscFunctionReturn(0); 189435bd34faSBarry Smith } 189535bd34faSBarry Smith 18965ccb76cbSHong Zhang /* -------------------------------------------------------------------------------------------*/ 18978e7ba810SStefano Zampini PetscErrorCode MatFactorSetSchurIS_MUMPS(Mat F, IS is) 18986444a565SStefano Zampini { 1899e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 19008e7ba810SStefano Zampini const PetscInt *idxs; 19018e7ba810SStefano Zampini PetscInt size,i; 19026444a565SStefano Zampini PetscErrorCode ierr; 19036444a565SStefano Zampini 19046444a565SStefano Zampini PetscFunctionBegin; 1905b3cb21ddSStefano Zampini ierr = ISGetLocalSize(is,&size);CHKERRQ(ierr); 19062d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 19073ab56b82SJunchao Zhang PetscBool ls,gs; /* gs is false if any rank other than root has non-empty IS */ 1908241dbb5eSStefano Zampini 19093ab56b82SJunchao Zhang ls = mumps->myid ? (size ? PETSC_FALSE : PETSC_TRUE) : PETSC_TRUE; /* always true on root; false on others if their size != 0 */ 19103ab56b82SJunchao Zhang ierr = MPI_Allreduce(&ls,&gs,1,MPIU_BOOL,MPI_LAND,mumps->petsc_comm);CHKERRQ(ierr); 1911241dbb5eSStefano Zampini if (!gs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MUMPS distributed parallel Schur complements not yet supported from PETSc\n"); 1912241dbb5eSStefano Zampini } 19136444a565SStefano Zampini if (mumps->id.size_schur != size) { 19146444a565SStefano Zampini ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr); 19156444a565SStefano Zampini mumps->id.size_schur = size; 19166444a565SStefano Zampini mumps->id.schur_lld = size; 19176444a565SStefano Zampini ierr = PetscMalloc2(size,&mumps->id.listvar_schur,size*size,&mumps->id.schur);CHKERRQ(ierr); 19186444a565SStefano Zampini } 1919b3cb21ddSStefano Zampini 1920b3cb21ddSStefano Zampini /* Schur complement matrix */ 1921b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.size_schur,(PetscScalar*)mumps->id.schur,&F->schur);CHKERRQ(ierr); 1922b3cb21ddSStefano Zampini if (mumps->sym == 1) { 1923b3cb21ddSStefano Zampini ierr = MatSetOption(F->schur,MAT_SPD,PETSC_TRUE);CHKERRQ(ierr); 1924b3cb21ddSStefano Zampini } 1925b3cb21ddSStefano Zampini 1926b3cb21ddSStefano Zampini /* MUMPS expects Fortran style indices */ 19278e7ba810SStefano Zampini ierr = ISGetIndices(is,&idxs);CHKERRQ(ierr); 1928580bdb30SBarry Smith ierr = PetscArraycpy(mumps->id.listvar_schur,idxs,size);CHKERRQ(ierr); 19298e7ba810SStefano Zampini for (i=0;i<size;i++) mumps->id.listvar_schur[i]++; 19308e7ba810SStefano Zampini ierr = ISRestoreIndices(is,&idxs);CHKERRQ(ierr); 19312d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 1932241dbb5eSStefano Zampini mumps->id.ICNTL(19) = 1; /* MUMPS returns Schur centralized on the host */ 1933241dbb5eSStefano Zampini } else { 19346444a565SStefano Zampini if (F->factortype == MAT_FACTOR_LU) { 193559ac8732SStefano Zampini mumps->id.ICNTL(19) = 3; /* MUMPS returns full matrix */ 19366444a565SStefano Zampini } else { 193759ac8732SStefano Zampini mumps->id.ICNTL(19) = 2; /* MUMPS returns lower triangular part */ 19386444a565SStefano Zampini } 1939241dbb5eSStefano Zampini } 194059ac8732SStefano Zampini /* set a special value of ICNTL (not handled my MUMPS) to be used in the solve phase by PETSc */ 1941b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 19426444a565SStefano Zampini PetscFunctionReturn(0); 19436444a565SStefano Zampini } 194459ac8732SStefano Zampini 19456444a565SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 19465a05ddb0SStefano Zampini PetscErrorCode MatFactorCreateSchurComplement_MUMPS(Mat F,Mat* S) 19476444a565SStefano Zampini { 19486444a565SStefano Zampini Mat St; 1949e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 19506444a565SStefano Zampini PetscScalar *array; 19516444a565SStefano Zampini #if defined(PETSC_USE_COMPLEX) 19528ac429a0SStefano Zampini PetscScalar im = PetscSqrtScalar((PetscScalar)-1.0); 19536444a565SStefano Zampini #endif 19546444a565SStefano Zampini PetscErrorCode ierr; 19556444a565SStefano Zampini 19566444a565SStefano Zampini PetscFunctionBegin; 19575a05ddb0SStefano Zampini if (!mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it"); 1958241dbb5eSStefano Zampini ierr = MatCreate(PETSC_COMM_SELF,&St);CHKERRQ(ierr); 19596444a565SStefano Zampini ierr = MatSetSizes(St,PETSC_DECIDE,PETSC_DECIDE,mumps->id.size_schur,mumps->id.size_schur);CHKERRQ(ierr); 19606444a565SStefano Zampini ierr = MatSetType(St,MATDENSE);CHKERRQ(ierr); 19616444a565SStefano Zampini ierr = MatSetUp(St);CHKERRQ(ierr); 19626444a565SStefano Zampini ierr = MatDenseGetArray(St,&array);CHKERRQ(ierr); 196359ac8732SStefano Zampini if (!mumps->sym) { /* MUMPS always return a full matrix */ 19646444a565SStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 19656444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19666444a565SStefano Zampini for (i=0;i<N;i++) { 19676444a565SStefano Zampini for (j=0;j<N;j++) { 19686444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19696444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19706444a565SStefano Zampini #else 19716444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19726444a565SStefano Zampini #endif 19736444a565SStefano Zampini array[j*N+i] = val; 19746444a565SStefano Zampini } 19756444a565SStefano Zampini } 19766444a565SStefano Zampini } else { /* stored by columns */ 1977580bdb30SBarry Smith ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr); 19786444a565SStefano Zampini } 19796444a565SStefano Zampini } else { /* either full or lower-triangular (not packed) */ 19806444a565SStefano Zampini if (mumps->id.ICNTL(19) == 2) { /* lower triangular stored by columns */ 19816444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19826444a565SStefano Zampini for (i=0;i<N;i++) { 19836444a565SStefano Zampini for (j=i;j<N;j++) { 19846444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19856444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19866444a565SStefano Zampini #else 19876444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19886444a565SStefano Zampini #endif 19896444a565SStefano Zampini array[i*N+j] = val; 19906444a565SStefano Zampini array[j*N+i] = val; 19916444a565SStefano Zampini } 19926444a565SStefano Zampini } 19936444a565SStefano Zampini } else if (mumps->id.ICNTL(19) == 3) { /* full matrix */ 1994580bdb30SBarry Smith ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr); 19956444a565SStefano Zampini } else { /* ICNTL(19) == 1 lower triangular stored by rows */ 19966444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19976444a565SStefano Zampini for (i=0;i<N;i++) { 19986444a565SStefano Zampini for (j=0;j<i+1;j++) { 19996444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 20006444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 20016444a565SStefano Zampini #else 20026444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 20036444a565SStefano Zampini #endif 20046444a565SStefano Zampini array[i*N+j] = val; 20056444a565SStefano Zampini array[j*N+i] = val; 20066444a565SStefano Zampini } 20076444a565SStefano Zampini } 20086444a565SStefano Zampini } 20096444a565SStefano Zampini } 20106444a565SStefano Zampini ierr = MatDenseRestoreArray(St,&array);CHKERRQ(ierr); 20116444a565SStefano Zampini *S = St; 20126444a565SStefano Zampini PetscFunctionReturn(0); 20136444a565SStefano Zampini } 20146444a565SStefano Zampini 201559ac8732SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 20165ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt ival) 20175ccb76cbSHong Zhang { 2018e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 20195ccb76cbSHong Zhang 20205ccb76cbSHong Zhang PetscFunctionBegin; 2021a5e57a09SHong Zhang mumps->id.ICNTL(icntl) = ival; 20225ccb76cbSHong Zhang PetscFunctionReturn(0); 20235ccb76cbSHong Zhang } 20245ccb76cbSHong Zhang 2025bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt *ival) 2026bc6112feSHong Zhang { 2027e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2028bc6112feSHong Zhang 2029bc6112feSHong Zhang PetscFunctionBegin; 2030bc6112feSHong Zhang *ival = mumps->id.ICNTL(icntl); 2031bc6112feSHong Zhang PetscFunctionReturn(0); 2032bc6112feSHong Zhang } 2033bc6112feSHong Zhang 20345ccb76cbSHong Zhang /*@ 20355ccb76cbSHong Zhang MatMumpsSetIcntl - Set MUMPS parameter ICNTL() 20365ccb76cbSHong Zhang 20375ccb76cbSHong Zhang Logically Collective on Mat 20385ccb76cbSHong Zhang 20395ccb76cbSHong Zhang Input Parameters: 20405ccb76cbSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 20415ccb76cbSHong Zhang . icntl - index of MUMPS parameter array ICNTL() 20425ccb76cbSHong Zhang - ival - value of MUMPS ICNTL(icntl) 20435ccb76cbSHong Zhang 20445ccb76cbSHong Zhang Options Database: 20455ccb76cbSHong Zhang . -mat_mumps_icntl_<icntl> <ival> 20465ccb76cbSHong Zhang 20475ccb76cbSHong Zhang Level: beginner 20485ccb76cbSHong Zhang 204996a0c994SBarry Smith References: 205096a0c994SBarry Smith . MUMPS Users' Guide 20515ccb76cbSHong Zhang 20529fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 20535ccb76cbSHong Zhang @*/ 20545ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl(Mat F,PetscInt icntl,PetscInt ival) 20555ccb76cbSHong Zhang { 20565ccb76cbSHong Zhang PetscErrorCode ierr; 20575ccb76cbSHong Zhang 20585ccb76cbSHong Zhang PetscFunctionBegin; 20592989dfd4SHong Zhang PetscValidType(F,1); 20602989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 20615ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 20625ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,ival,3); 20635ccb76cbSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetIcntl_C",(Mat,PetscInt,PetscInt),(F,icntl,ival));CHKERRQ(ierr); 20645ccb76cbSHong Zhang PetscFunctionReturn(0); 20655ccb76cbSHong Zhang } 20665ccb76cbSHong Zhang 2067a21f80fcSHong Zhang /*@ 2068a21f80fcSHong Zhang MatMumpsGetIcntl - Get MUMPS parameter ICNTL() 2069a21f80fcSHong Zhang 2070a21f80fcSHong Zhang Logically Collective on Mat 2071a21f80fcSHong Zhang 2072a21f80fcSHong Zhang Input Parameters: 2073a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2074a21f80fcSHong Zhang - icntl - index of MUMPS parameter array ICNTL() 2075a21f80fcSHong Zhang 2076a21f80fcSHong Zhang Output Parameter: 2077a21f80fcSHong Zhang . ival - value of MUMPS ICNTL(icntl) 2078a21f80fcSHong Zhang 2079a21f80fcSHong Zhang Level: beginner 2080a21f80fcSHong Zhang 208196a0c994SBarry Smith References: 208296a0c994SBarry Smith . MUMPS Users' Guide 2083a21f80fcSHong Zhang 20849fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2085a21f80fcSHong Zhang @*/ 2086bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl(Mat F,PetscInt icntl,PetscInt *ival) 2087bc6112feSHong Zhang { 2088bc6112feSHong Zhang PetscErrorCode ierr; 2089bc6112feSHong Zhang 2090bc6112feSHong Zhang PetscFunctionBegin; 20912989dfd4SHong Zhang PetscValidType(F,1); 20922989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2093bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2094bc6112feSHong Zhang PetscValidIntPointer(ival,3); 20952989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetIcntl_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2096bc6112feSHong Zhang PetscFunctionReturn(0); 2097bc6112feSHong Zhang } 2098bc6112feSHong Zhang 20998928b65cSHong Zhang /* -------------------------------------------------------------------------------------------*/ 21008928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal val) 21018928b65cSHong Zhang { 2102e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 21038928b65cSHong Zhang 21048928b65cSHong Zhang PetscFunctionBegin; 21058928b65cSHong Zhang mumps->id.CNTL(icntl) = val; 21068928b65cSHong Zhang PetscFunctionReturn(0); 21078928b65cSHong Zhang } 21088928b65cSHong Zhang 2109bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal *val) 2110bc6112feSHong Zhang { 2111e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2112bc6112feSHong Zhang 2113bc6112feSHong Zhang PetscFunctionBegin; 2114bc6112feSHong Zhang *val = mumps->id.CNTL(icntl); 2115bc6112feSHong Zhang PetscFunctionReturn(0); 2116bc6112feSHong Zhang } 2117bc6112feSHong Zhang 21188928b65cSHong Zhang /*@ 21198928b65cSHong Zhang MatMumpsSetCntl - Set MUMPS parameter CNTL() 21208928b65cSHong Zhang 21218928b65cSHong Zhang Logically Collective on Mat 21228928b65cSHong Zhang 21238928b65cSHong Zhang Input Parameters: 21248928b65cSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 21258928b65cSHong Zhang . icntl - index of MUMPS parameter array CNTL() 21268928b65cSHong Zhang - val - value of MUMPS CNTL(icntl) 21278928b65cSHong Zhang 21288928b65cSHong Zhang Options Database: 21298928b65cSHong Zhang . -mat_mumps_cntl_<icntl> <val> 21308928b65cSHong Zhang 21318928b65cSHong Zhang Level: beginner 21328928b65cSHong Zhang 213396a0c994SBarry Smith References: 213496a0c994SBarry Smith . MUMPS Users' Guide 21358928b65cSHong Zhang 21369fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 21378928b65cSHong Zhang @*/ 21388928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl(Mat F,PetscInt icntl,PetscReal val) 21398928b65cSHong Zhang { 21408928b65cSHong Zhang PetscErrorCode ierr; 21418928b65cSHong Zhang 21428928b65cSHong Zhang PetscFunctionBegin; 21432989dfd4SHong Zhang PetscValidType(F,1); 21442989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 21458928b65cSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2146bc6112feSHong Zhang PetscValidLogicalCollectiveReal(F,val,3); 21478928b65cSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetCntl_C",(Mat,PetscInt,PetscReal),(F,icntl,val));CHKERRQ(ierr); 21488928b65cSHong Zhang PetscFunctionReturn(0); 21498928b65cSHong Zhang } 21508928b65cSHong Zhang 2151a21f80fcSHong Zhang /*@ 2152a21f80fcSHong Zhang MatMumpsGetCntl - Get MUMPS parameter CNTL() 2153a21f80fcSHong Zhang 2154a21f80fcSHong Zhang Logically Collective on Mat 2155a21f80fcSHong Zhang 2156a21f80fcSHong Zhang Input Parameters: 2157a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2158a21f80fcSHong Zhang - icntl - index of MUMPS parameter array CNTL() 2159a21f80fcSHong Zhang 2160a21f80fcSHong Zhang Output Parameter: 2161a21f80fcSHong Zhang . val - value of MUMPS CNTL(icntl) 2162a21f80fcSHong Zhang 2163a21f80fcSHong Zhang Level: beginner 2164a21f80fcSHong Zhang 216596a0c994SBarry Smith References: 216696a0c994SBarry Smith . MUMPS Users' Guide 2167a21f80fcSHong Zhang 21689fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2169a21f80fcSHong Zhang @*/ 2170bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl(Mat F,PetscInt icntl,PetscReal *val) 2171bc6112feSHong Zhang { 2172bc6112feSHong Zhang PetscErrorCode ierr; 2173bc6112feSHong Zhang 2174bc6112feSHong Zhang PetscFunctionBegin; 21752989dfd4SHong Zhang PetscValidType(F,1); 21762989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2177bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2178bc6112feSHong Zhang PetscValidRealPointer(val,3); 21792989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetCntl_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2180bc6112feSHong Zhang PetscFunctionReturn(0); 2181bc6112feSHong Zhang } 2182bc6112feSHong Zhang 2183ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo_MUMPS(Mat F,PetscInt icntl,PetscInt *info) 2184bc6112feSHong Zhang { 2185e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2186bc6112feSHong Zhang 2187bc6112feSHong Zhang PetscFunctionBegin; 2188bc6112feSHong Zhang *info = mumps->id.INFO(icntl); 2189bc6112feSHong Zhang PetscFunctionReturn(0); 2190bc6112feSHong Zhang } 2191bc6112feSHong Zhang 2192ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog_MUMPS(Mat F,PetscInt icntl,PetscInt *infog) 2193bc6112feSHong Zhang { 2194e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2195bc6112feSHong Zhang 2196bc6112feSHong Zhang PetscFunctionBegin; 2197bc6112feSHong Zhang *infog = mumps->id.INFOG(icntl); 2198bc6112feSHong Zhang PetscFunctionReturn(0); 2199bc6112feSHong Zhang } 2200bc6112feSHong Zhang 2201ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfo) 2202bc6112feSHong Zhang { 2203e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2204bc6112feSHong Zhang 2205bc6112feSHong Zhang PetscFunctionBegin; 2206bc6112feSHong Zhang *rinfo = mumps->id.RINFO(icntl); 2207bc6112feSHong Zhang PetscFunctionReturn(0); 2208bc6112feSHong Zhang } 2209bc6112feSHong Zhang 2210ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfog) 2211bc6112feSHong Zhang { 2212e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2213bc6112feSHong Zhang 2214bc6112feSHong Zhang PetscFunctionBegin; 2215bc6112feSHong Zhang *rinfog = mumps->id.RINFOG(icntl); 2216bc6112feSHong Zhang PetscFunctionReturn(0); 2217bc6112feSHong Zhang } 2218bc6112feSHong Zhang 221989a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse_MUMPS(Mat F,Mat spRHS) 2220bb599dfdSHong Zhang { 2221bb599dfdSHong Zhang PetscErrorCode ierr; 22220e6b8875SHong Zhang Mat Bt = NULL,Btseq = NULL; 22230e6b8875SHong Zhang PetscBool flg; 2224bb599dfdSHong Zhang Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2225bb599dfdSHong Zhang PetscScalar *aa; 2226bb599dfdSHong Zhang PetscInt spnr,*ia,*ja; 2227bb599dfdSHong Zhang 2228bb599dfdSHong Zhang PetscFunctionBegin; 2229e3f2db6aSHong Zhang PetscValidIntPointer(spRHS,2); 22300e6b8875SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)spRHS,MATTRANSPOSEMAT,&flg);CHKERRQ(ierr); 22310e6b8875SHong Zhang if (flg) { 2232bb599dfdSHong Zhang ierr = MatTransposeGetMat(spRHS,&Bt);CHKERRQ(ierr); 22330e6b8875SHong Zhang } else SETERRQ(PetscObjectComm((PetscObject)spRHS),PETSC_ERR_ARG_WRONG,"Matrix spRHS must be type MATTRANSPOSEMAT matrix"); 2234bb599dfdSHong Zhang 2235bb599dfdSHong Zhang ierr = MatMumpsSetIcntl(F,30,1);CHKERRQ(ierr); 2236bb599dfdSHong Zhang 22372d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 22380e6b8875SHong Zhang Mat_MPIAIJ *b = (Mat_MPIAIJ*)Bt->data; 22390e6b8875SHong Zhang Btseq = b->A; 22400e6b8875SHong Zhang } else { 22410e6b8875SHong Zhang Btseq = Bt; 22420e6b8875SHong Zhang } 22430e6b8875SHong Zhang 2244e3f2db6aSHong Zhang if (!mumps->myid) { 22450e6b8875SHong Zhang ierr = MatSeqAIJGetArray(Btseq,&aa);CHKERRQ(ierr); 22460e6b8875SHong Zhang ierr = MatGetRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 22470e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2248bb599dfdSHong Zhang 2249bb599dfdSHong Zhang mumps->id.irhs_ptr = ia; 2250bb599dfdSHong Zhang mumps->id.irhs_sparse = ja; 2251bb599dfdSHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 2252bb599dfdSHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 2253e3f2db6aSHong Zhang } else { 2254e3f2db6aSHong Zhang mumps->id.irhs_ptr = NULL; 2255e3f2db6aSHong Zhang mumps->id.irhs_sparse = NULL; 2256e3f2db6aSHong Zhang mumps->id.nz_rhs = 0; 2257e3f2db6aSHong Zhang mumps->id.rhs_sparse = NULL; 2258e3f2db6aSHong Zhang } 2259bb599dfdSHong Zhang mumps->id.ICNTL(20) = 1; /* rhs is sparse */ 2260e3f2db6aSHong Zhang mumps->id.ICNTL(21) = 0; /* solution is in assembled centralized format */ 2261bb599dfdSHong Zhang 2262bb599dfdSHong Zhang /* solve phase */ 2263bb599dfdSHong Zhang /*-------------*/ 2264bb599dfdSHong Zhang mumps->id.job = JOB_SOLVE; 22653ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 2266e3f2db6aSHong Zhang if (mumps->id.INFOG(1) < 0) 2267e3f2db6aSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 226814267174SHong Zhang 2269e3f2db6aSHong Zhang if (!mumps->myid) { 22700e6b8875SHong Zhang ierr = MatSeqAIJRestoreArray(Btseq,&aa);CHKERRQ(ierr); 22710e6b8875SHong Zhang ierr = MatRestoreRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 22720e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2273e3f2db6aSHong Zhang } 2274bb599dfdSHong Zhang PetscFunctionReturn(0); 2275bb599dfdSHong Zhang } 2276bb599dfdSHong Zhang 2277bb599dfdSHong Zhang /*@ 227889a9c03aSHong Zhang MatMumpsGetInverse - Get user-specified set of entries in inverse of A 2279bb599dfdSHong Zhang 2280bb599dfdSHong Zhang Logically Collective on Mat 2281bb599dfdSHong Zhang 2282bb599dfdSHong Zhang Input Parameters: 2283bb599dfdSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2284e3f2db6aSHong Zhang - spRHS - sequential sparse matrix in MATTRANSPOSEMAT format holding specified indices in processor[0] 2285bb599dfdSHong Zhang 2286bb599dfdSHong Zhang Output Parameter: 2287e3f2db6aSHong Zhang . spRHS - requested entries of inverse of A 2288bb599dfdSHong Zhang 2289bb599dfdSHong Zhang Level: beginner 2290bb599dfdSHong Zhang 2291bb599dfdSHong Zhang References: 2292bb599dfdSHong Zhang . MUMPS Users' Guide 2293bb599dfdSHong Zhang 2294bb599dfdSHong Zhang .seealso: MatGetFactor(), MatCreateTranspose() 2295bb599dfdSHong Zhang @*/ 229689a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse(Mat F,Mat spRHS) 2297bb599dfdSHong Zhang { 2298bb599dfdSHong Zhang PetscErrorCode ierr; 2299bb599dfdSHong Zhang 2300bb599dfdSHong Zhang PetscFunctionBegin; 2301bb599dfdSHong Zhang PetscValidType(F,1); 2302bb599dfdSHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 230389a9c03aSHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverse_C",(Mat,Mat),(F,spRHS));CHKERRQ(ierr); 2304bb599dfdSHong Zhang PetscFunctionReturn(0); 2305bb599dfdSHong Zhang } 2306bb599dfdSHong Zhang 23070e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose_MUMPS(Mat F,Mat spRHST) 23080e6b8875SHong Zhang { 23090e6b8875SHong Zhang PetscErrorCode ierr; 23100e6b8875SHong Zhang Mat spRHS; 23110e6b8875SHong Zhang 23120e6b8875SHong Zhang PetscFunctionBegin; 23130e6b8875SHong Zhang ierr = MatCreateTranspose(spRHST,&spRHS);CHKERRQ(ierr); 23140e6b8875SHong Zhang ierr = MatMumpsGetInverse_MUMPS(F,spRHS);CHKERRQ(ierr); 23150e6b8875SHong Zhang ierr = MatDestroy(&spRHS);CHKERRQ(ierr); 23160e6b8875SHong Zhang PetscFunctionReturn(0); 23170e6b8875SHong Zhang } 23180e6b8875SHong Zhang 23190e6b8875SHong Zhang /*@ 2320eef1237cSHong Zhang MatMumpsGetInverseTranspose - Get user-specified set of entries in inverse of matrix A^T 23210e6b8875SHong Zhang 23220e6b8875SHong Zhang Logically Collective on Mat 23230e6b8875SHong Zhang 23240e6b8875SHong Zhang Input Parameters: 23250e6b8875SHong Zhang + F - the factored matrix of A obtained by calling MatGetFactor() from PETSc-MUMPS interface 23260e6b8875SHong Zhang - spRHST - sequential sparse matrix in MATAIJ format holding specified indices of A^T in processor[0] 23270e6b8875SHong Zhang 23280e6b8875SHong Zhang Output Parameter: 23290e6b8875SHong Zhang . spRHST - requested entries of inverse of A^T 23300e6b8875SHong Zhang 23310e6b8875SHong Zhang Level: beginner 23320e6b8875SHong Zhang 23330e6b8875SHong Zhang References: 23340e6b8875SHong Zhang . MUMPS Users' Guide 23350e6b8875SHong Zhang 23360e6b8875SHong Zhang .seealso: MatGetFactor(), MatCreateTranspose(), MatMumpsGetInverse() 23370e6b8875SHong Zhang @*/ 23380e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose(Mat F,Mat spRHST) 23390e6b8875SHong Zhang { 23400e6b8875SHong Zhang PetscErrorCode ierr; 23410e6b8875SHong Zhang PetscBool flg; 23420e6b8875SHong Zhang 23430e6b8875SHong Zhang PetscFunctionBegin; 23440e6b8875SHong Zhang PetscValidType(F,1); 23450e6b8875SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 23460e6b8875SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)spRHST,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 23470e6b8875SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)spRHST),PETSC_ERR_ARG_WRONG,"Matrix spRHST must be MATAIJ matrix"); 23480e6b8875SHong Zhang 23490e6b8875SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverseTranspose_C",(Mat,Mat),(F,spRHST));CHKERRQ(ierr); 23500e6b8875SHong Zhang PetscFunctionReturn(0); 23510e6b8875SHong Zhang } 23520e6b8875SHong Zhang 2353a21f80fcSHong Zhang /*@ 2354a21f80fcSHong Zhang MatMumpsGetInfo - Get MUMPS parameter INFO() 2355a21f80fcSHong Zhang 2356a21f80fcSHong Zhang Logically Collective on Mat 2357a21f80fcSHong Zhang 2358a21f80fcSHong Zhang Input Parameters: 2359a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2360a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFO() 2361a21f80fcSHong Zhang 2362a21f80fcSHong Zhang Output Parameter: 2363a21f80fcSHong Zhang . ival - value of MUMPS INFO(icntl) 2364a21f80fcSHong Zhang 2365a21f80fcSHong Zhang Level: beginner 2366a21f80fcSHong Zhang 236796a0c994SBarry Smith References: 236896a0c994SBarry Smith . MUMPS Users' Guide 2369a21f80fcSHong Zhang 23709fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2371a21f80fcSHong Zhang @*/ 2372ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo(Mat F,PetscInt icntl,PetscInt *ival) 2373bc6112feSHong Zhang { 2374bc6112feSHong Zhang PetscErrorCode ierr; 2375bc6112feSHong Zhang 2376bc6112feSHong Zhang PetscFunctionBegin; 23772989dfd4SHong Zhang PetscValidType(F,1); 23782989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2379ca810319SHong Zhang PetscValidIntPointer(ival,3); 23802989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfo_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2381bc6112feSHong Zhang PetscFunctionReturn(0); 2382bc6112feSHong Zhang } 2383bc6112feSHong Zhang 2384a21f80fcSHong Zhang /*@ 2385a21f80fcSHong Zhang MatMumpsGetInfog - Get MUMPS parameter INFOG() 2386a21f80fcSHong Zhang 2387a21f80fcSHong Zhang Logically Collective on Mat 2388a21f80fcSHong Zhang 2389a21f80fcSHong Zhang Input Parameters: 2390a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2391a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFOG() 2392a21f80fcSHong Zhang 2393a21f80fcSHong Zhang Output Parameter: 2394a21f80fcSHong Zhang . ival - value of MUMPS INFOG(icntl) 2395a21f80fcSHong Zhang 2396a21f80fcSHong Zhang Level: beginner 2397a21f80fcSHong Zhang 239896a0c994SBarry Smith References: 239996a0c994SBarry Smith . MUMPS Users' Guide 2400a21f80fcSHong Zhang 24019fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2402a21f80fcSHong Zhang @*/ 2403ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog(Mat F,PetscInt icntl,PetscInt *ival) 2404bc6112feSHong Zhang { 2405bc6112feSHong Zhang PetscErrorCode ierr; 2406bc6112feSHong Zhang 2407bc6112feSHong Zhang PetscFunctionBegin; 24082989dfd4SHong Zhang PetscValidType(F,1); 24092989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2410ca810319SHong Zhang PetscValidIntPointer(ival,3); 24112989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfog_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2412bc6112feSHong Zhang PetscFunctionReturn(0); 2413bc6112feSHong Zhang } 2414bc6112feSHong Zhang 2415a21f80fcSHong Zhang /*@ 2416a21f80fcSHong Zhang MatMumpsGetRinfo - Get MUMPS parameter RINFO() 2417a21f80fcSHong Zhang 2418a21f80fcSHong Zhang Logically Collective on Mat 2419a21f80fcSHong Zhang 2420a21f80fcSHong Zhang Input Parameters: 2421a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2422a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFO() 2423a21f80fcSHong Zhang 2424a21f80fcSHong Zhang Output Parameter: 2425a21f80fcSHong Zhang . val - value of MUMPS RINFO(icntl) 2426a21f80fcSHong Zhang 2427a21f80fcSHong Zhang Level: beginner 2428a21f80fcSHong Zhang 242996a0c994SBarry Smith References: 243096a0c994SBarry Smith . MUMPS Users' Guide 2431a21f80fcSHong Zhang 24329fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2433a21f80fcSHong Zhang @*/ 2434ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo(Mat F,PetscInt icntl,PetscReal *val) 2435bc6112feSHong Zhang { 2436bc6112feSHong Zhang PetscErrorCode ierr; 2437bc6112feSHong Zhang 2438bc6112feSHong Zhang PetscFunctionBegin; 24392989dfd4SHong Zhang PetscValidType(F,1); 24402989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2441bc6112feSHong Zhang PetscValidRealPointer(val,3); 24422989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfo_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2443bc6112feSHong Zhang PetscFunctionReturn(0); 2444bc6112feSHong Zhang } 2445bc6112feSHong Zhang 2446a21f80fcSHong Zhang /*@ 2447a21f80fcSHong Zhang MatMumpsGetRinfog - Get MUMPS parameter RINFOG() 2448a21f80fcSHong Zhang 2449a21f80fcSHong Zhang Logically Collective on Mat 2450a21f80fcSHong Zhang 2451a21f80fcSHong Zhang Input Parameters: 2452a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2453a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFOG() 2454a21f80fcSHong Zhang 2455a21f80fcSHong Zhang Output Parameter: 2456a21f80fcSHong Zhang . val - value of MUMPS RINFOG(icntl) 2457a21f80fcSHong Zhang 2458a21f80fcSHong Zhang Level: beginner 2459a21f80fcSHong Zhang 246096a0c994SBarry Smith References: 246196a0c994SBarry Smith . MUMPS Users' Guide 2462a21f80fcSHong Zhang 24639fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2464a21f80fcSHong Zhang @*/ 2465ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog(Mat F,PetscInt icntl,PetscReal *val) 2466bc6112feSHong Zhang { 2467bc6112feSHong Zhang PetscErrorCode ierr; 2468bc6112feSHong Zhang 2469bc6112feSHong Zhang PetscFunctionBegin; 24702989dfd4SHong Zhang PetscValidType(F,1); 24712989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2472bc6112feSHong Zhang PetscValidRealPointer(val,3); 24732989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfog_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2474bc6112feSHong Zhang PetscFunctionReturn(0); 2475bc6112feSHong Zhang } 2476bc6112feSHong Zhang 247724b6179bSKris Buschelman /*MC 24782692d6eeSBarry Smith MATSOLVERMUMPS - A matrix type providing direct solvers (LU and Cholesky) for 247924b6179bSKris Buschelman distributed and sequential matrices via the external package MUMPS. 248024b6179bSKris Buschelman 248141c8de11SBarry Smith Works with MATAIJ and MATSBAIJ matrices 248224b6179bSKris Buschelman 2483c2b89b5dSBarry Smith Use ./configure --download-mumps --download-scalapack --download-parmetis --download-metis --download-ptscotch to have PETSc installed with MUMPS 2484c2b89b5dSBarry Smith 2485217d3b1eSJunchao Zhang Use ./configure --with-openmp --download-hwloc (or --with-hwloc) to enable running MUMPS in MPI+OpenMP hybrid mode and non-MUMPS in flat-MPI mode. See details below. 2486217d3b1eSJunchao Zhang 24873ca39a21SBarry Smith Use -pc_type cholesky or lu -pc_factor_mat_solver_type mumps to use this direct solver 2488c2b89b5dSBarry Smith 248924b6179bSKris Buschelman Options Database Keys: 24904422a9fcSPatrick Sanan + -mat_mumps_icntl_1 - ICNTL(1): output stream for error messages 24914422a9fcSPatrick Sanan . -mat_mumps_icntl_2 - ICNTL(2): output stream for diagnostic printing, statistics, and warning 24924422a9fcSPatrick Sanan . -mat_mumps_icntl_3 - ICNTL(3): output stream for global information, collected on the host 24934422a9fcSPatrick Sanan . -mat_mumps_icntl_4 - ICNTL(4): level of printing (0 to 4) 24944422a9fcSPatrick Sanan . -mat_mumps_icntl_6 - ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7) 24954422a9fcSPatrick Sanan . -mat_mumps_icntl_7 - ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis 24964422a9fcSPatrick Sanan . -mat_mumps_icntl_8 - ICNTL(8): scaling strategy (-2 to 8 or 77) 24974422a9fcSPatrick Sanan . -mat_mumps_icntl_10 - ICNTL(10): max num of refinements 24984422a9fcSPatrick Sanan . -mat_mumps_icntl_11 - ICNTL(11): statistics related to an error analysis (via -ksp_view) 24994422a9fcSPatrick Sanan . -mat_mumps_icntl_12 - ICNTL(12): an ordering strategy for symmetric matrices (0 to 3) 25004422a9fcSPatrick Sanan . -mat_mumps_icntl_13 - ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting 25014422a9fcSPatrick Sanan . -mat_mumps_icntl_14 - ICNTL(14): percentage increase in the estimated working space 25024422a9fcSPatrick Sanan . -mat_mumps_icntl_19 - ICNTL(19): computes the Schur complement 25034422a9fcSPatrick Sanan . -mat_mumps_icntl_22 - ICNTL(22): in-core/out-of-core factorization and solve (0 or 1) 25044422a9fcSPatrick Sanan . -mat_mumps_icntl_23 - ICNTL(23): max size of the working memory (MB) that can allocate per processor 25054422a9fcSPatrick Sanan . -mat_mumps_icntl_24 - ICNTL(24): detection of null pivot rows (0 or 1) 25064422a9fcSPatrick Sanan . -mat_mumps_icntl_25 - ICNTL(25): compute a solution of a deficient matrix and a null space basis 25074422a9fcSPatrick Sanan . -mat_mumps_icntl_26 - ICNTL(26): drives the solution phase if a Schur complement matrix 25084422a9fcSPatrick Sanan . -mat_mumps_icntl_28 - ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering 25094422a9fcSPatrick Sanan . -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis 25104422a9fcSPatrick Sanan . -mat_mumps_icntl_30 - ICNTL(30): compute user-specified set of entries in inv(A) 25114422a9fcSPatrick Sanan . -mat_mumps_icntl_31 - ICNTL(31): indicates which factors may be discarded during factorization 25124422a9fcSPatrick Sanan . -mat_mumps_icntl_33 - ICNTL(33): compute determinant 2513a0e18203SThibaut Appel . -mat_mumps_icntl_35 - ICNTL(35): level of activation of BLR (Block Low-Rank) feature 2514a0e18203SThibaut Appel . -mat_mumps_icntl_36 - ICNTL(36): controls the choice of BLR factorization variant 2515a0e18203SThibaut Appel . -mat_mumps_icntl_38 - ICNTL(38): sets the estimated compression rate of LU factors with BLR 25164422a9fcSPatrick Sanan . -mat_mumps_cntl_1 - CNTL(1): relative pivoting threshold 25174422a9fcSPatrick Sanan . -mat_mumps_cntl_2 - CNTL(2): stopping criterion of refinement 25184422a9fcSPatrick Sanan . -mat_mumps_cntl_3 - CNTL(3): absolute pivoting threshold 25194422a9fcSPatrick Sanan . -mat_mumps_cntl_4 - CNTL(4): value for static pivoting 2520217d3b1eSJunchao Zhang . -mat_mumps_cntl_5 - CNTL(5): fixation for null pivots 2521a0e18203SThibaut Appel . -mat_mumps_cntl_7 - CNTL(7): precision of the dropping parameter used during BLR factorization 2522217d3b1eSJunchao Zhang - -mat_mumps_use_omp_threads [m] - run MUMPS in MPI+OpenMP hybrid mode as if omp_set_num_threads(m) is called before calling MUMPS. 2523217d3b1eSJunchao Zhang Default might be the number of cores per CPU package (socket) as reported by hwloc and suggested by the MUMPS manual. 252424b6179bSKris Buschelman 252524b6179bSKris Buschelman Level: beginner 252624b6179bSKris Buschelman 252795452b02SPatrick Sanan Notes: 252838548759SBarry Smith MUMPS Cholesky does not handle (complex) Hermitian matrices http://mumps.enseeiht.fr/doc/userguide_5.2.1.pdf so using it will error if the matrix is Hermitian. 252938548759SBarry Smith 2530c0decd05SBarry Smith When a MUMPS factorization fails inside a KSP solve, for example with a KSP_DIVERGED_PC_FAILED, one can find the MUMPS information about the failure by calling 25319fc87aa7SBarry Smith $ KSPGetPC(ksp,&pc); 25329fc87aa7SBarry Smith $ PCFactorGetMatrix(pc,&mat); 25339fc87aa7SBarry Smith $ MatMumpsGetInfo(mat,....); 25349fc87aa7SBarry Smith $ MatMumpsGetInfog(mat,....); etc. 25359fc87aa7SBarry Smith Or you can run with -ksp_error_if_not_converged and the program will be stopped and the information printed in the error message. 25369fc87aa7SBarry Smith 25378fcaa860SBarry Smith Two modes to run MUMPS/PETSc with OpenMP 25388fcaa860SBarry Smith 25398fcaa860SBarry Smith $ Set OMP_NUM_THREADS and run with fewer MPI ranks than cores. For example, if you want to have 16 OpenMP 25408fcaa860SBarry Smith $ threads per rank, then you may use "export OMP_NUM_THREADS=16 && mpirun -n 4 ./test". 25418fcaa860SBarry Smith 25428fcaa860SBarry Smith $ -mat_mumps_use_omp_threads [m] and run your code with as many MPI ranks as the number of cores. For example, 25438fcaa860SBarry Smith $ if a compute node has 32 cores and you run on two nodes, you may use "mpirun -n 64 ./test -mat_mumps_use_omp_threads 16" 25448fcaa860SBarry Smith 25458fcaa860SBarry Smith To run MUMPS in MPI+OpenMP hybrid mode (i.e., enable multithreading in MUMPS), but still run the non-MUMPS part 2546217d3b1eSJunchao Zhang (i.e., PETSc part) of your code in the so-called flat-MPI (aka pure-MPI) mode, you need to configure PETSc with --with-openmp --download-hwloc 2547217d3b1eSJunchao Zhang (or --with-hwloc), and have an MPI that supports MPI-3.0's process shared memory (which is usually available). Since MUMPS calls BLAS 25488fcaa860SBarry Smith libraries, to really get performance, you should have multithreaded BLAS libraries such as Intel MKL, AMD ACML, Cray libSci or OpenBLAS 25498fcaa860SBarry Smith (PETSc will automatically try to utilized a threaded BLAS if --with-openmp is provided). 2550217d3b1eSJunchao Zhang 25518fcaa860SBarry Smith If you run your code through a job submission system, there are caveats in MPI rank mapping. We use MPI_Comm_split_type() to obtain MPI 2552217d3b1eSJunchao Zhang processes on each compute node. Listing the processes in rank ascending order, we split processes on a node into consecutive groups of 2553217d3b1eSJunchao Zhang size m and create a communicator called omp_comm for each group. Rank 0 in an omp_comm is called the master rank, and others in the omp_comm 2554217d3b1eSJunchao Zhang are called slave ranks (or slaves). Only master ranks are seen to MUMPS and slaves are not. We will free CPUs assigned to slaves (might be set 2555217d3b1eSJunchao Zhang by CPU binding policies in job scripts) and make the CPUs available to the master so that OMP threads spawned by MUMPS can run on the CPUs. 2556217d3b1eSJunchao Zhang In a multi-socket compute node, MPI rank mapping is an issue. Still use the above example and suppose your compute node has two sockets, 2557217d3b1eSJunchao Zhang if you interleave MPI ranks on the two sockets, in other words, even ranks are placed on socket 0, and odd ranks are on socket 1, and bind 2558217d3b1eSJunchao Zhang MPI ranks to cores, then with -mat_mumps_use_omp_threads 16, a master rank (and threads it spawns) will use half cores in socket 0, and half 2559217d3b1eSJunchao Zhang cores in socket 1, that definitely hurts locality. On the other hand, if you map MPI ranks consecutively on the two sockets, then the 2560217d3b1eSJunchao Zhang problem will not happen. Therefore, when you use -mat_mumps_use_omp_threads, you need to keep an eye on your MPI rank mapping and CPU binding. 25618fcaa860SBarry Smith For example, with the Slurm job scheduler, one can use srun --cpu-bind=verbose -m block:block to map consecutive MPI ranks to sockets and 2562217d3b1eSJunchao Zhang examine the mapping result. 2563217d3b1eSJunchao Zhang 2564217d3b1eSJunchao Zhang PETSc does not control thread binding in MUMPS. So to get best performance, one still has to set OMP_PROC_BIND and OMP_PLACES in job scripts, 2565217d3b1eSJunchao Zhang for example, export OMP_PLACES=threads and export OMP_PROC_BIND=spread. One does not need to export OMP_NUM_THREADS=m in job scripts as PETSc 2566217d3b1eSJunchao Zhang calls omp_set_num_threads(m) internally before calling MUMPS. 2567217d3b1eSJunchao Zhang 2568217d3b1eSJunchao Zhang References: 2569217d3b1eSJunchao Zhang + 1. - Heroux, Michael A., R. Brightwell, and Michael M. Wolf. "Bi-modal MPI and MPI+ threads computing on scalable multicore systems." IJHPCA (Submitted) (2011). 2570217d3b1eSJunchao Zhang - 2. - Gutierrez, Samuel K., et al. "Accommodating Thread-Level Heterogeneity in Coupled Parallel Applications." Parallel and Distributed Processing Symposium (IPDPS), 2017 IEEE International. IEEE, 2017. 2571217d3b1eSJunchao Zhang 25723ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog(), KSPGetPC(), PCGetFactor(), PCFactorGetMatrix() 257341c8de11SBarry Smith 257424b6179bSKris Buschelman M*/ 257524b6179bSKris Buschelman 2576ea799195SBarry Smith static PetscErrorCode MatFactorGetSolverType_mumps(Mat A,MatSolverType *type) 257735bd34faSBarry Smith { 257835bd34faSBarry Smith PetscFunctionBegin; 25792692d6eeSBarry Smith *type = MATSOLVERMUMPS; 258035bd34faSBarry Smith PetscFunctionReturn(0); 258135bd34faSBarry Smith } 258235bd34faSBarry Smith 2583bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI AIJ matrices */ 2584cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_aij_mumps(Mat A,MatFactorType ftype,Mat *F) 25852877fffaSHong Zhang { 25862877fffaSHong Zhang Mat B; 25872877fffaSHong Zhang PetscErrorCode ierr; 25882877fffaSHong Zhang Mat_MUMPS *mumps; 2589ace3abfcSBarry Smith PetscBool isSeqAIJ; 25902877fffaSHong Zhang 25912877fffaSHong Zhang PetscFunctionBegin; 25922877fffaSHong Zhang /* Create the factorization matrix */ 2593251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ);CHKERRQ(ierr); 2594ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 25952877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2596e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2597e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 25982877fffaSHong Zhang 2599b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 26002205254eSKarl Rupp 26012877fffaSHong Zhang B->ops->view = MatView_MUMPS; 260235bd34faSBarry Smith B->ops->getinfo = MatGetInfo_MUMPS; 26032205254eSKarl Rupp 26043ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 26055a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 26065a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2607bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2608bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2609bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2610bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2611ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2612ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2613ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2614ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 261589a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 26160e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 26176444a565SStefano Zampini 2618450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2619450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 2620d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 2621bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqaij; 2622bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpiaij; 2623746480a1SHong Zhang mumps->sym = 0; 2624dcd589f8SShri Abhyankar } else { 262567877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2626450b117fSShri Abhyankar B->factortype = MAT_FACTOR_CHOLESKY; 2627bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqsbaij; 2628bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpisbaij; 262959ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 263059ac8732SStefano Zampini mumps->sym = 2; 263159ac8732SStefano Zampini #else 26326fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 26336fdc2a6dSBarry Smith else mumps->sym = 2; 263459ac8732SStefano Zampini #endif 2635450b117fSShri Abhyankar } 26362877fffaSHong Zhang 263700c67f3bSHong Zhang /* set solvertype */ 263800c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 263900c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 264000c67f3bSHong Zhang 26412877fffaSHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2642e69c285eSBarry Smith B->data = (void*)mumps; 26432205254eSKarl Rupp 2644f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2645746480a1SHong Zhang 26462877fffaSHong Zhang *F = B; 26472877fffaSHong Zhang PetscFunctionReturn(0); 26482877fffaSHong Zhang } 26492877fffaSHong Zhang 2650bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI SBAIJ matrices */ 2651cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_sbaij_mumps(Mat A,MatFactorType ftype,Mat *F) 26522877fffaSHong Zhang { 26532877fffaSHong Zhang Mat B; 26542877fffaSHong Zhang PetscErrorCode ierr; 26552877fffaSHong Zhang Mat_MUMPS *mumps; 2656ace3abfcSBarry Smith PetscBool isSeqSBAIJ; 26572877fffaSHong Zhang 26582877fffaSHong Zhang PetscFunctionBegin; 2659ce94432eSBarry Smith if (ftype != MAT_FACTOR_CHOLESKY) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with MUMPS LU, use AIJ matrix"); 2660251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ);CHKERRQ(ierr); 26612877fffaSHong Zhang /* Create the factorization matrix */ 2662ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 26632877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2664e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2665e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2666e69c285eSBarry Smith 2667b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2668bccb9932SShri Abhyankar if (isSeqSBAIJ) { 266916ebf90aSShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_seqsbaij_seqsbaij; 2670dcd589f8SShri Abhyankar } else { 2671bccb9932SShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_mpisbaij_mpisbaij; 2672bccb9932SShri Abhyankar } 2673bccb9932SShri Abhyankar 2674e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 267567877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2676bccb9932SShri Abhyankar B->ops->view = MatView_MUMPS; 26772205254eSKarl Rupp 26783ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 26795a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 26805a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2681b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2682b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2683b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2684b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2685ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2686ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2687ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2688ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 268989a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2690eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 26912205254eSKarl Rupp 2692f4762488SHong Zhang B->factortype = MAT_FACTOR_CHOLESKY; 269359ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 269459ac8732SStefano Zampini mumps->sym = 2; 269559ac8732SStefano Zampini #else 26966fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 26976fdc2a6dSBarry Smith else mumps->sym = 2; 269859ac8732SStefano Zampini #endif 2699a214ac2aSShri Abhyankar 270000c67f3bSHong Zhang /* set solvertype */ 270100c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 270200c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 270300c67f3bSHong Zhang 2704f3c0ef26SHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2705e69c285eSBarry Smith B->data = (void*)mumps; 27062205254eSKarl Rupp 2707f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2708746480a1SHong Zhang 27092877fffaSHong Zhang *F = B; 27102877fffaSHong Zhang PetscFunctionReturn(0); 27112877fffaSHong Zhang } 271297969023SHong Zhang 2713cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_baij_mumps(Mat A,MatFactorType ftype,Mat *F) 271467877ebaSShri Abhyankar { 271567877ebaSShri Abhyankar Mat B; 271667877ebaSShri Abhyankar PetscErrorCode ierr; 271767877ebaSShri Abhyankar Mat_MUMPS *mumps; 2718ace3abfcSBarry Smith PetscBool isSeqBAIJ; 271967877ebaSShri Abhyankar 272067877ebaSShri Abhyankar PetscFunctionBegin; 272167877ebaSShri Abhyankar /* Create the factorization matrix */ 2722251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&isSeqBAIJ);CHKERRQ(ierr); 2723ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 272467877ebaSShri Abhyankar ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2725e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2726e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2727450b117fSShri Abhyankar 2728b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2729450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2730450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_BAIJMUMPS; 2731450b117fSShri Abhyankar B->factortype = MAT_FACTOR_LU; 2732bccb9932SShri Abhyankar if (isSeqBAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqbaij_seqaij; 2733bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpibaij_mpiaij; 2734746480a1SHong Zhang mumps->sym = 0; 2735f23aa3ddSBarry Smith } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc BAIJ matrices with MUMPS Cholesky, use SBAIJ or AIJ matrix instead\n"); 2736bccb9932SShri Abhyankar 2737e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 2738450b117fSShri Abhyankar B->ops->view = MatView_MUMPS; 27392205254eSKarl Rupp 27403ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 27415a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 27425a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2743bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2744bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2745bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2746bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2747ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2748ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2749ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2750ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 275189a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2752eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 2753450b117fSShri Abhyankar 275400c67f3bSHong Zhang /* set solvertype */ 275500c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 275600c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 275700c67f3bSHong Zhang 27587ee00b23SStefano Zampini B->ops->destroy = MatDestroy_MUMPS; 27597ee00b23SStefano Zampini B->data = (void*)mumps; 27607ee00b23SStefano Zampini 27617ee00b23SStefano Zampini ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 27627ee00b23SStefano Zampini 27637ee00b23SStefano Zampini *F = B; 27647ee00b23SStefano Zampini PetscFunctionReturn(0); 27657ee00b23SStefano Zampini } 27667ee00b23SStefano Zampini 27677ee00b23SStefano Zampini /* MatGetFactor for Seq and MPI SELL matrices */ 27687ee00b23SStefano Zampini static PetscErrorCode MatGetFactor_sell_mumps(Mat A,MatFactorType ftype,Mat *F) 27697ee00b23SStefano Zampini { 27707ee00b23SStefano Zampini Mat B; 27717ee00b23SStefano Zampini PetscErrorCode ierr; 27727ee00b23SStefano Zampini Mat_MUMPS *mumps; 27737ee00b23SStefano Zampini PetscBool isSeqSELL; 27747ee00b23SStefano Zampini 27757ee00b23SStefano Zampini PetscFunctionBegin; 27767ee00b23SStefano Zampini /* Create the factorization matrix */ 27777ee00b23SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSELL,&isSeqSELL);CHKERRQ(ierr); 27787ee00b23SStefano Zampini ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 27797ee00b23SStefano Zampini ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 27807ee00b23SStefano Zampini ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 27817ee00b23SStefano Zampini ierr = MatSetUp(B);CHKERRQ(ierr); 27827ee00b23SStefano Zampini 27837ee00b23SStefano Zampini ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 27847ee00b23SStefano Zampini 27857ee00b23SStefano Zampini B->ops->view = MatView_MUMPS; 27867ee00b23SStefano Zampini B->ops->getinfo = MatGetInfo_MUMPS; 27877ee00b23SStefano Zampini 27887ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 27897ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 27907ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 27917ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 27927ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 27937ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 27947ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 27957ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 27967ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 27977ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 27987ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 27997ee00b23SStefano Zampini 28007ee00b23SStefano Zampini if (ftype == MAT_FACTOR_LU) { 28017ee00b23SStefano Zampini B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 28027ee00b23SStefano Zampini B->factortype = MAT_FACTOR_LU; 28037ee00b23SStefano Zampini if (isSeqSELL) mumps->ConvertToTriples = MatConvertToTriples_seqsell_seqaij; 28047ee00b23SStefano Zampini else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 28057ee00b23SStefano Zampini mumps->sym = 0; 28067ee00b23SStefano Zampini } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 28077ee00b23SStefano Zampini 28087ee00b23SStefano Zampini /* set solvertype */ 28097ee00b23SStefano Zampini ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 28107ee00b23SStefano Zampini ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 28117ee00b23SStefano Zampini 2812450b117fSShri Abhyankar B->ops->destroy = MatDestroy_MUMPS; 2813e69c285eSBarry Smith B->data = (void*)mumps; 28142205254eSKarl Rupp 2815f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2816746480a1SHong Zhang 2817450b117fSShri Abhyankar *F = B; 2818450b117fSShri Abhyankar PetscFunctionReturn(0); 2819450b117fSShri Abhyankar } 282042c9c57cSBarry Smith 28213ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_MUMPS(void) 282242c9c57cSBarry Smith { 282342c9c57cSBarry Smith PetscErrorCode ierr; 282442c9c57cSBarry Smith 282542c9c57cSBarry Smith PetscFunctionBegin; 28263ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28273ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28283ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28293ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28303ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPISBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 28313ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28323ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28333ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28343ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28353ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 28367ee00b23SStefano Zampini ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSELL,MAT_FACTOR_LU,MatGetFactor_sell_mumps);CHKERRQ(ierr); 283742c9c57cSBarry Smith PetscFunctionReturn(0); 283842c9c57cSBarry Smith } 283942c9c57cSBarry Smith 2840