11c2a3de1SBarry Smith 2397b6df1SKris Buschelman /* 3c2b5dc30SHong Zhang Provides an interface to the MUMPS sparse solver 4397b6df1SKris Buschelman */ 551d5961aSHong Zhang 6c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> /*I "petscmat.h" I*/ 7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h> 87ee00b23SStefano Zampini #include <../src/mat/impls/sell/mpi/mpisell.h> 9397b6df1SKris Buschelman 10397b6df1SKris Buschelman EXTERN_C_BEGIN 11397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 122907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 132907cef9SHong Zhang #include <cmumps_c.h> 142907cef9SHong Zhang #else 15c6db04a5SJed Brown #include <zmumps_c.h> 162907cef9SHong Zhang #endif 172907cef9SHong Zhang #else 182907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 192907cef9SHong Zhang #include <smumps_c.h> 20397b6df1SKris Buschelman #else 21c6db04a5SJed Brown #include <dmumps_c.h> 22397b6df1SKris Buschelman #endif 232907cef9SHong Zhang #endif 24397b6df1SKris Buschelman EXTERN_C_END 25397b6df1SKris Buschelman #define JOB_INIT -1 263d472b54SHong Zhang #define JOB_FACTSYMBOLIC 1 273d472b54SHong Zhang #define JOB_FACTNUMERIC 2 283d472b54SHong Zhang #define JOB_SOLVE 3 29397b6df1SKris Buschelman #define JOB_END -2 303d472b54SHong Zhang 312907cef9SHong Zhang /* calls to MUMPS */ 322907cef9SHong Zhang #if defined(PETSC_USE_COMPLEX) 332907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 343ab56b82SJunchao Zhang #define MUMPS_c cmumps_c 352907cef9SHong Zhang #else 363ab56b82SJunchao Zhang #define MUMPS_c zmumps_c 372907cef9SHong Zhang #endif 382907cef9SHong Zhang #else 392907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 403ab56b82SJunchao Zhang #define MUMPS_c smumps_c 412907cef9SHong Zhang #else 423ab56b82SJunchao Zhang #define MUMPS_c dmumps_c 432907cef9SHong Zhang #endif 442907cef9SHong Zhang #endif 452907cef9SHong Zhang 46217d3b1eSJunchao Zhang /* if using PETSc OpenMP support, we only call MUMPS on master ranks. Before/after the call, we change/restore CPUs the master ranks can run on */ 473ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 483ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 493ab56b82SJunchao Zhang do { \ 503ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { \ 513ab56b82SJunchao Zhang if (mumps->is_omp_master) { \ 523ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterBegin(mumps->omp_ctrl);CHKERRQ(ierr); \ 533ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 543ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterEnd(mumps->omp_ctrl);CHKERRQ(ierr); \ 553ab56b82SJunchao Zhang } \ 563ab56b82SJunchao Zhang ierr = PetscOmpCtrlBarrier(mumps->omp_ctrl);CHKERRQ(ierr); \ 573ab56b82SJunchao Zhang } else { \ 583ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 593ab56b82SJunchao Zhang } \ 603ab56b82SJunchao Zhang } while(0) 613ab56b82SJunchao Zhang #else 623ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 633ab56b82SJunchao Zhang do { MUMPS_c(&mumps->id); } while (0) 643ab56b82SJunchao Zhang #endif 653ab56b82SJunchao Zhang 66940cd9d6SSatish Balay /* declare MumpsScalar */ 67940cd9d6SSatish Balay #if defined(PETSC_USE_COMPLEX) 68940cd9d6SSatish Balay #if defined(PETSC_USE_REAL_SINGLE) 69940cd9d6SSatish Balay #define MumpsScalar mumps_complex 70940cd9d6SSatish Balay #else 71940cd9d6SSatish Balay #define MumpsScalar mumps_double_complex 72940cd9d6SSatish Balay #endif 73940cd9d6SSatish Balay #else 74940cd9d6SSatish Balay #define MumpsScalar PetscScalar 75940cd9d6SSatish Balay #endif 763d472b54SHong Zhang 77397b6df1SKris Buschelman /* macros s.t. indices match MUMPS documentation */ 78397b6df1SKris Buschelman #define ICNTL(I) icntl[(I)-1] 79397b6df1SKris Buschelman #define CNTL(I) cntl[(I)-1] 80397b6df1SKris Buschelman #define INFOG(I) infog[(I)-1] 81a7aca84bSHong Zhang #define INFO(I) info[(I)-1] 82397b6df1SKris Buschelman #define RINFOG(I) rinfog[(I)-1] 83adc1d99fSHong Zhang #define RINFO(I) rinfo[(I)-1] 84397b6df1SKris Buschelman 85397b6df1SKris Buschelman typedef struct { 86397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 872907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 882907cef9SHong Zhang CMUMPS_STRUC_C id; 892907cef9SHong Zhang #else 90397b6df1SKris Buschelman ZMUMPS_STRUC_C id; 912907cef9SHong Zhang #endif 922907cef9SHong Zhang #else 932907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 942907cef9SHong Zhang SMUMPS_STRUC_C id; 95397b6df1SKris Buschelman #else 96397b6df1SKris Buschelman DMUMPS_STRUC_C id; 97397b6df1SKris Buschelman #endif 982907cef9SHong Zhang #endif 992907cef9SHong Zhang 100397b6df1SKris Buschelman MatStructure matstruc; 1012d4298aeSJunchao Zhang PetscMPIInt myid,petsc_size; 102a5e57a09SHong Zhang PetscInt *irn,*jcn,nz,sym; 103397b6df1SKris Buschelman PetscScalar *val; 1042d4298aeSJunchao Zhang MPI_Comm mumps_comm; 105a5e57a09SHong Zhang PetscInt ICNTL9_pre; /* check if ICNTL(9) is changed from previous MatSolve */ 106801fbe65SHong Zhang VecScatter scat_rhs, scat_sol; /* used by MatSolve() */ 107801fbe65SHong Zhang Vec b_seq,x_seq; 108b34f08ffSHong Zhang PetscInt ninfo,*info; /* display INFO */ 109b5fa320bSStefano Zampini PetscInt sizeredrhs; 11059ac8732SStefano Zampini PetscScalar *schur_sol; 11159ac8732SStefano Zampini PetscInt schur_sizesol; 1122205254eSKarl Rupp 1133ab56b82SJunchao Zhang PetscBool use_petsc_omp_support; 1143ab56b82SJunchao Zhang PetscOmpCtrl omp_ctrl; /* an OpenMP controler that blocked processes will release their CPU (MPI_Barrier does not have this guarantee) */ 1153ab56b82SJunchao Zhang MPI_Comm petsc_comm,omp_comm; /* petsc_comm is petsc matrix's comm */ 1163ab56b82SJunchao Zhang PetscMPIInt mpinz; /* on master rank, nz = sum(mpinz) over omp_comm; on other ranks, mpinz = nz*/ 1173ab56b82SJunchao Zhang PetscMPIInt omp_comm_size; 1183ab56b82SJunchao Zhang PetscBool is_omp_master; /* is this rank the master of omp_comm */ 1193ab56b82SJunchao Zhang PetscMPIInt *recvcount,*displs; 1203ab56b82SJunchao Zhang 121bccb9932SShri Abhyankar PetscErrorCode (*ConvertToTriples)(Mat, int, MatReuse, int*, int**, int**, PetscScalar**); 122f0c56d0fSKris Buschelman } Mat_MUMPS; 123f0c56d0fSKris Buschelman 12409573ac7SBarry Smith extern PetscErrorCode MatDuplicate_MUMPS(Mat,MatDuplicateOption,Mat*); 125b24902e0SBarry Smith 12659ac8732SStefano Zampini static PetscErrorCode MatMumpsResetSchur_Private(Mat_MUMPS* mumps) 127b5fa320bSStefano Zampini { 128b5fa320bSStefano Zampini PetscErrorCode ierr; 129b5fa320bSStefano Zampini 130b5fa320bSStefano Zampini PetscFunctionBegin; 13159ac8732SStefano Zampini ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr); 13259ac8732SStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 13359ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 13459ac8732SStefano Zampini mumps->id.size_schur = 0; 135b3cb21ddSStefano Zampini mumps->id.schur_lld = 0; 13659ac8732SStefano Zampini mumps->id.ICNTL(19) = 0; 13759ac8732SStefano Zampini PetscFunctionReturn(0); 13859ac8732SStefano Zampini } 13959ac8732SStefano Zampini 140b3cb21ddSStefano Zampini /* solve with rhs in mumps->id.redrhs and return in the same location */ 141b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsSolveSchur_Private(Mat F) 14259ac8732SStefano Zampini { 143b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 144b3cb21ddSStefano Zampini Mat S,B,X; 145b3cb21ddSStefano Zampini MatFactorSchurStatus schurstatus; 146b3cb21ddSStefano Zampini PetscInt sizesol; 14759ac8732SStefano Zampini PetscErrorCode ierr; 14859ac8732SStefano Zampini 14959ac8732SStefano Zampini PetscFunctionBegin; 150b3cb21ddSStefano Zampini ierr = MatFactorFactorizeSchurComplement(F);CHKERRQ(ierr); 151b3cb21ddSStefano Zampini ierr = MatFactorGetSchurComplement(F,&S,&schurstatus);CHKERRQ(ierr); 152b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&B);CHKERRQ(ierr); 153b3cb21ddSStefano Zampini switch (schurstatus) { 154b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_FACTORED: 155b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&X);CHKERRQ(ierr); 156b3cb21ddSStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 157b3cb21ddSStefano Zampini ierr = MatMatSolveTranspose(S,B,X);CHKERRQ(ierr); 15859ac8732SStefano Zampini } else { 159b3cb21ddSStefano Zampini ierr = MatMatSolve(S,B,X);CHKERRQ(ierr); 16059ac8732SStefano Zampini } 161b3cb21ddSStefano Zampini break; 162b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_INVERTED: 163b3cb21ddSStefano Zampini sizesol = mumps->id.nrhs*mumps->id.size_schur; 16459ac8732SStefano Zampini if (!mumps->schur_sol || sizesol > mumps->schur_sizesol) { 16559ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 16659ac8732SStefano Zampini ierr = PetscMalloc1(sizesol,&mumps->schur_sol);CHKERRQ(ierr); 16759ac8732SStefano Zampini mumps->schur_sizesol = sizesol; 168b5fa320bSStefano Zampini } 169b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,mumps->schur_sol,&X);CHKERRQ(ierr); 17059ac8732SStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 171b3cb21ddSStefano Zampini ierr = MatTransposeMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 172b5fa320bSStefano Zampini } else { 173b3cb21ddSStefano Zampini ierr = MatMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 174b5fa320bSStefano Zampini } 175b3cb21ddSStefano Zampini ierr = MatCopy(X,B,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 176b3cb21ddSStefano Zampini break; 177b3cb21ddSStefano Zampini default: 178b3cb21ddSStefano Zampini SETERRQ1(PetscObjectComm((PetscObject)F),PETSC_ERR_SUP,"Unhandled MatFactorSchurStatus %D",F->schur_status); 179b3cb21ddSStefano Zampini break; 18059ac8732SStefano Zampini } 181b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,&S,schurstatus);CHKERRQ(ierr); 182b3cb21ddSStefano Zampini ierr = MatDestroy(&B);CHKERRQ(ierr); 183b3cb21ddSStefano Zampini ierr = MatDestroy(&X);CHKERRQ(ierr); 184b5fa320bSStefano Zampini PetscFunctionReturn(0); 185b5fa320bSStefano Zampini } 186b5fa320bSStefano Zampini 187b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsHandleSchur_Private(Mat F, PetscBool expansion) 188b5fa320bSStefano Zampini { 189b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 190b5fa320bSStefano Zampini PetscErrorCode ierr; 191b5fa320bSStefano Zampini 192b5fa320bSStefano Zampini PetscFunctionBegin; 193b5fa320bSStefano Zampini if (!mumps->id.ICNTL(19)) { /* do nothing when Schur complement has not been computed */ 194b5fa320bSStefano Zampini PetscFunctionReturn(0); 195b5fa320bSStefano Zampini } 196b8f61ee1SStefano Zampini if (!expansion) { /* prepare for the condensation step */ 197b5fa320bSStefano Zampini PetscInt sizeredrhs = mumps->id.nrhs*mumps->id.size_schur; 198b5fa320bSStefano Zampini /* allocate MUMPS internal array to store reduced right-hand sides */ 199b5fa320bSStefano Zampini if (!mumps->id.redrhs || sizeredrhs > mumps->sizeredrhs) { 200b5fa320bSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 201b5fa320bSStefano Zampini mumps->id.lredrhs = mumps->id.size_schur; 202b5fa320bSStefano Zampini ierr = PetscMalloc1(mumps->id.nrhs*mumps->id.lredrhs,&mumps->id.redrhs);CHKERRQ(ierr); 203b5fa320bSStefano Zampini mumps->sizeredrhs = mumps->id.nrhs*mumps->id.lredrhs; 204b5fa320bSStefano Zampini } 205b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 1; /* condensation phase */ 206b5fa320bSStefano Zampini } else { /* prepare for the expansion step */ 207b8f61ee1SStefano Zampini /* solve Schur complement (this has to be done by the MUMPS user, so basically us) */ 208b3cb21ddSStefano Zampini ierr = MatMumpsSolveSchur_Private(F);CHKERRQ(ierr); 209b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 2; /* expansion phase */ 2103ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 211b5fa320bSStefano Zampini if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 212b5fa320bSStefano Zampini /* restore defaults */ 213b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 214d3d598ffSStefano Zampini /* free MUMPS internal array for redrhs if we have solved for multiple rhs in order to save memory space */ 215d3d598ffSStefano Zampini if (mumps->id.nrhs > 1) { 216d3d598ffSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 217d3d598ffSStefano Zampini mumps->id.lredrhs = 0; 218d3d598ffSStefano Zampini mumps->sizeredrhs = 0; 219d3d598ffSStefano Zampini } 220b5fa320bSStefano Zampini } 221b5fa320bSStefano Zampini PetscFunctionReturn(0); 222b5fa320bSStefano Zampini } 223b5fa320bSStefano Zampini 224397b6df1SKris Buschelman /* 225d341cd04SHong Zhang MatConvertToTriples_A_B - convert Petsc matrix to triples: row[nz], col[nz], val[nz] 226d341cd04SHong Zhang 227397b6df1SKris Buschelman input: 22867877ebaSShri Abhyankar A - matrix in aij,baij or sbaij (bs=1) format 229397b6df1SKris Buschelman shift - 0: C style output triple; 1: Fortran style output triple. 230bccb9932SShri Abhyankar reuse - MAT_INITIAL_MATRIX: spaces are allocated and values are set for the triple 231bccb9932SShri Abhyankar MAT_REUSE_MATRIX: only the values in v array are updated 232397b6df1SKris Buschelman output: 233397b6df1SKris Buschelman nnz - dim of r, c, and v (number of local nonzero entries of A) 234397b6df1SKris Buschelman r, c, v - row and col index, matrix values (matrix triples) 235eb9baa12SBarry Smith 236eb9baa12SBarry Smith The returned values r, c, and sometimes v are obtained in a single PetscMalloc(). Then in MatDestroy_MUMPS() it is 2377ee00b23SStefano Zampini freed with PetscFree(mumps->irn); This is not ideal code, the fact that v is ONLY sometimes part of mumps->irn means 238eb9baa12SBarry Smith that the PetscMalloc() cannot easily be replaced with a PetscMalloc3(). 239eb9baa12SBarry Smith 240397b6df1SKris Buschelman */ 24116ebf90aSShri Abhyankar 242bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 243b24902e0SBarry Smith { 244185f6596SHong Zhang const PetscInt *ai,*aj,*ajj,M=A->rmap->n; 24567877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 246dfbe8321SBarry Smith PetscErrorCode ierr; 247c1490034SHong Zhang PetscInt *row,*col; 24816ebf90aSShri Abhyankar Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 249397b6df1SKris Buschelman 250397b6df1SKris Buschelman PetscFunctionBegin; 25116ebf90aSShri Abhyankar *v=aa->a; 252bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 2532205254eSKarl Rupp nz = aa->nz; 2542205254eSKarl Rupp ai = aa->i; 2552205254eSKarl Rupp aj = aa->j; 25616ebf90aSShri Abhyankar *nnz = nz; 257785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 258185f6596SHong Zhang col = row + nz; 259185f6596SHong Zhang 26016ebf90aSShri Abhyankar nz = 0; 26116ebf90aSShri Abhyankar for (i=0; i<M; i++) { 26216ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 26367877ebaSShri Abhyankar ajj = aj + ai[i]; 26467877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 26567877ebaSShri Abhyankar row[nz] = i+shift; col[nz++] = ajj[j] + shift; 26616ebf90aSShri Abhyankar } 26716ebf90aSShri Abhyankar } 26816ebf90aSShri Abhyankar *r = row; *c = col; 26916ebf90aSShri Abhyankar } 27016ebf90aSShri Abhyankar PetscFunctionReturn(0); 27116ebf90aSShri Abhyankar } 272397b6df1SKris Buschelman 2737ee00b23SStefano Zampini PetscErrorCode MatConvertToTriples_seqsell_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 2747ee00b23SStefano Zampini { 2757ee00b23SStefano Zampini Mat_SeqSELL *a=(Mat_SeqSELL*)A->data; 2767ee00b23SStefano Zampini PetscInt *ptr; 2777ee00b23SStefano Zampini 2787ee00b23SStefano Zampini PetscFunctionBegin; 2797ee00b23SStefano Zampini *v = a->val; 2807ee00b23SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 2817ee00b23SStefano Zampini PetscInt nz,i,j,row; 2827ee00b23SStefano Zampini PetscErrorCode ierr; 2837ee00b23SStefano Zampini 2847ee00b23SStefano Zampini nz = a->sliidx[a->totalslices]; 2857ee00b23SStefano Zampini *nnz = nz; 2867ee00b23SStefano Zampini ierr = PetscMalloc1(2*nz, &ptr);CHKERRQ(ierr); 2877ee00b23SStefano Zampini *r = ptr; 2887ee00b23SStefano Zampini *c = ptr + nz; 2897ee00b23SStefano Zampini 2907ee00b23SStefano Zampini for (i=0; i<a->totalslices; i++) { 2917ee00b23SStefano Zampini for (j=a->sliidx[i],row=0; j<a->sliidx[i+1]; j++,row=((row+1)&0x07)) { 2927ee00b23SStefano Zampini *ptr++ = 8*i + row + shift; 2937ee00b23SStefano Zampini } 2947ee00b23SStefano Zampini } 2957ee00b23SStefano Zampini for (i=0;i<nz;i++) *ptr++ = a->colidx[i] + shift; 2967ee00b23SStefano Zampini } 2977ee00b23SStefano Zampini PetscFunctionReturn(0); 2987ee00b23SStefano Zampini } 2997ee00b23SStefano Zampini 300bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqbaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 30167877ebaSShri Abhyankar { 30267877ebaSShri Abhyankar Mat_SeqBAIJ *aa=(Mat_SeqBAIJ*)A->data; 30333d57670SJed Brown const PetscInt *ai,*aj,*ajj,bs2 = aa->bs2; 30433d57670SJed Brown PetscInt bs,M,nz,idx=0,rnz,i,j,k,m; 30567877ebaSShri Abhyankar PetscErrorCode ierr; 30667877ebaSShri Abhyankar PetscInt *row,*col; 30767877ebaSShri Abhyankar 30867877ebaSShri Abhyankar PetscFunctionBegin; 30933d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 31033d57670SJed Brown M = A->rmap->N/bs; 311cf3759fdSShri Abhyankar *v = aa->a; 312bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 313cf3759fdSShri Abhyankar ai = aa->i; aj = aa->j; 31467877ebaSShri Abhyankar nz = bs2*aa->nz; 31567877ebaSShri Abhyankar *nnz = nz; 316785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 317185f6596SHong Zhang col = row + nz; 318185f6596SHong Zhang 31967877ebaSShri Abhyankar for (i=0; i<M; i++) { 32067877ebaSShri Abhyankar ajj = aj + ai[i]; 32167877ebaSShri Abhyankar rnz = ai[i+1] - ai[i]; 32267877ebaSShri Abhyankar for (k=0; k<rnz; k++) { 32367877ebaSShri Abhyankar for (j=0; j<bs; j++) { 32467877ebaSShri Abhyankar for (m=0; m<bs; m++) { 32567877ebaSShri Abhyankar row[idx] = i*bs + m + shift; 326cf3759fdSShri Abhyankar col[idx++] = bs*(ajj[k]) + j + shift; 32767877ebaSShri Abhyankar } 32867877ebaSShri Abhyankar } 32967877ebaSShri Abhyankar } 33067877ebaSShri Abhyankar } 331cf3759fdSShri Abhyankar *r = row; *c = col; 33267877ebaSShri Abhyankar } 33367877ebaSShri Abhyankar PetscFunctionReturn(0); 33467877ebaSShri Abhyankar } 33567877ebaSShri Abhyankar 336bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqsbaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 33716ebf90aSShri Abhyankar { 33867877ebaSShri Abhyankar const PetscInt *ai, *aj,*ajj,M=A->rmap->n; 33967877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 34016ebf90aSShri Abhyankar PetscErrorCode ierr; 34116ebf90aSShri Abhyankar PetscInt *row,*col; 34216ebf90aSShri Abhyankar Mat_SeqSBAIJ *aa=(Mat_SeqSBAIJ*)A->data; 34316ebf90aSShri Abhyankar 34416ebf90aSShri Abhyankar PetscFunctionBegin; 345882afa5aSHong Zhang *v = aa->a; 346bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 3472205254eSKarl Rupp nz = aa->nz; 3482205254eSKarl Rupp ai = aa->i; 3492205254eSKarl Rupp aj = aa->j; 3502205254eSKarl Rupp *v = aa->a; 35116ebf90aSShri Abhyankar *nnz = nz; 352785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 353185f6596SHong Zhang col = row + nz; 354185f6596SHong Zhang 35516ebf90aSShri Abhyankar nz = 0; 35616ebf90aSShri Abhyankar for (i=0; i<M; i++) { 35716ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 35867877ebaSShri Abhyankar ajj = aj + ai[i]; 35967877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 36067877ebaSShri Abhyankar row[nz] = i+shift; col[nz++] = ajj[j] + shift; 36116ebf90aSShri Abhyankar } 36216ebf90aSShri Abhyankar } 36316ebf90aSShri Abhyankar *r = row; *c = col; 36416ebf90aSShri Abhyankar } 36516ebf90aSShri Abhyankar PetscFunctionReturn(0); 36616ebf90aSShri Abhyankar } 36716ebf90aSShri Abhyankar 368bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 36916ebf90aSShri Abhyankar { 37067877ebaSShri Abhyankar const PetscInt *ai,*aj,*ajj,*adiag,M=A->rmap->n; 37167877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 37267877ebaSShri Abhyankar const PetscScalar *av,*v1; 37316ebf90aSShri Abhyankar PetscScalar *val; 37416ebf90aSShri Abhyankar PetscErrorCode ierr; 37516ebf90aSShri Abhyankar PetscInt *row,*col; 376829b1710SHong Zhang Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 37729b521d4Sstefano_zampini PetscBool missing; 37816ebf90aSShri Abhyankar 37916ebf90aSShri Abhyankar PetscFunctionBegin; 38016ebf90aSShri Abhyankar ai = aa->i; aj = aa->j; av = aa->a; 38116ebf90aSShri Abhyankar adiag = aa->diag; 38229b521d4Sstefano_zampini ierr = MatMissingDiagonal_SeqAIJ(A,&missing,&i);CHKERRQ(ierr); 383bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 3847ee00b23SStefano Zampini /* count nz in the upper triangular part of A */ 385829b1710SHong Zhang nz = 0; 38629b521d4Sstefano_zampini if (missing) { 38729b521d4Sstefano_zampini for (i=0; i<M; i++) { 38829b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 38929b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 39029b521d4Sstefano_zampini if (aj[j] < i) continue; 39129b521d4Sstefano_zampini nz++; 39229b521d4Sstefano_zampini } 39329b521d4Sstefano_zampini } else { 39429b521d4Sstefano_zampini nz += ai[i+1] - adiag[i]; 39529b521d4Sstefano_zampini } 39629b521d4Sstefano_zampini } 39729b521d4Sstefano_zampini } else { 398829b1710SHong Zhang for (i=0; i<M; i++) nz += ai[i+1] - adiag[i]; 39929b521d4Sstefano_zampini } 40016ebf90aSShri Abhyankar *nnz = nz; 401829b1710SHong Zhang 402185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 403185f6596SHong Zhang col = row + nz; 404185f6596SHong Zhang val = (PetscScalar*)(col + nz); 405185f6596SHong Zhang 40616ebf90aSShri Abhyankar nz = 0; 40729b521d4Sstefano_zampini if (missing) { 40829b521d4Sstefano_zampini for (i=0; i<M; i++) { 40929b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 41029b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 41129b521d4Sstefano_zampini if (aj[j] < i) continue; 41229b521d4Sstefano_zampini row[nz] = i+shift; 41329b521d4Sstefano_zampini col[nz] = aj[j]+shift; 41429b521d4Sstefano_zampini val[nz] = av[j]; 41529b521d4Sstefano_zampini nz++; 41629b521d4Sstefano_zampini } 41729b521d4Sstefano_zampini } else { 41829b521d4Sstefano_zampini rnz = ai[i+1] - adiag[i]; 41929b521d4Sstefano_zampini ajj = aj + adiag[i]; 42029b521d4Sstefano_zampini v1 = av + adiag[i]; 42129b521d4Sstefano_zampini for (j=0; j<rnz; j++) { 42229b521d4Sstefano_zampini row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 42329b521d4Sstefano_zampini } 42429b521d4Sstefano_zampini } 42529b521d4Sstefano_zampini } 42629b521d4Sstefano_zampini } else { 42716ebf90aSShri Abhyankar for (i=0; i<M; i++) { 42816ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 42967877ebaSShri Abhyankar ajj = aj + adiag[i]; 430cf3759fdSShri Abhyankar v1 = av + adiag[i]; 43167877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 43267877ebaSShri Abhyankar row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 43316ebf90aSShri Abhyankar } 43416ebf90aSShri Abhyankar } 43529b521d4Sstefano_zampini } 43616ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 437397b6df1SKris Buschelman } else { 43816ebf90aSShri Abhyankar nz = 0; val = *v; 43929b521d4Sstefano_zampini if (missing) { 44016ebf90aSShri Abhyankar for (i=0; i <M; i++) { 44129b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 44229b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 44329b521d4Sstefano_zampini if (aj[j] < i) continue; 44429b521d4Sstefano_zampini val[nz++] = av[j]; 44529b521d4Sstefano_zampini } 44629b521d4Sstefano_zampini } else { 44716ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 44867877ebaSShri Abhyankar v1 = av + adiag[i]; 44967877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 45067877ebaSShri Abhyankar val[nz++] = v1[j]; 45116ebf90aSShri Abhyankar } 45216ebf90aSShri Abhyankar } 45316ebf90aSShri Abhyankar } 45429b521d4Sstefano_zampini } else { 45516ebf90aSShri Abhyankar for (i=0; i <M; i++) { 45616ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 45716ebf90aSShri Abhyankar v1 = av + adiag[i]; 45816ebf90aSShri Abhyankar for (j=0; j<rnz; j++) { 45916ebf90aSShri Abhyankar val[nz++] = v1[j]; 46016ebf90aSShri Abhyankar } 46116ebf90aSShri Abhyankar } 46216ebf90aSShri Abhyankar } 46329b521d4Sstefano_zampini } 46416ebf90aSShri Abhyankar PetscFunctionReturn(0); 46516ebf90aSShri Abhyankar } 46616ebf90aSShri Abhyankar 467bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpisbaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 46816ebf90aSShri Abhyankar { 46916ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 47016ebf90aSShri Abhyankar PetscErrorCode ierr; 47116ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 47216ebf90aSShri Abhyankar PetscInt *row,*col; 47316ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 47416ebf90aSShri Abhyankar PetscScalar *val; 475397b6df1SKris Buschelman Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)A->data; 476397b6df1SKris Buschelman Mat_SeqSBAIJ *aa = (Mat_SeqSBAIJ*)(mat->A)->data; 477397b6df1SKris Buschelman Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 47816ebf90aSShri Abhyankar 47916ebf90aSShri Abhyankar PetscFunctionBegin; 480d0f46423SBarry Smith ai=aa->i; aj=aa->j; bi=bb->i; bj=bb->j; rstart= A->rmap->rstart; 481397b6df1SKris Buschelman av=aa->a; bv=bb->a; 482397b6df1SKris Buschelman 4832205254eSKarl Rupp garray = mat->garray; 4842205254eSKarl Rupp 485bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 48616ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 48716ebf90aSShri Abhyankar *nnz = nz; 488185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 489185f6596SHong Zhang col = row + nz; 490185f6596SHong Zhang val = (PetscScalar*)(col + nz); 491185f6596SHong Zhang 492397b6df1SKris Buschelman *r = row; *c = col; *v = val; 493397b6df1SKris Buschelman } else { 494397b6df1SKris Buschelman row = *r; col = *c; val = *v; 495397b6df1SKris Buschelman } 496397b6df1SKris Buschelman 497028e57e8SHong Zhang jj = 0; irow = rstart; 498397b6df1SKris Buschelman for (i=0; i<m; i++) { 499397b6df1SKris Buschelman ajj = aj + ai[i]; /* ptr to the beginning of this row */ 500397b6df1SKris Buschelman countA = ai[i+1] - ai[i]; 501397b6df1SKris Buschelman countB = bi[i+1] - bi[i]; 502397b6df1SKris Buschelman bjj = bj + bi[i]; 50316ebf90aSShri Abhyankar v1 = av + ai[i]; 50416ebf90aSShri Abhyankar v2 = bv + bi[i]; 505397b6df1SKris Buschelman 506397b6df1SKris Buschelman /* A-part */ 507397b6df1SKris Buschelman for (j=0; j<countA; j++) { 508bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 509397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 510397b6df1SKris Buschelman } 51116ebf90aSShri Abhyankar val[jj++] = v1[j]; 512397b6df1SKris Buschelman } 51316ebf90aSShri Abhyankar 51416ebf90aSShri Abhyankar /* B-part */ 51516ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 516bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 517397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 518397b6df1SKris Buschelman } 51916ebf90aSShri Abhyankar val[jj++] = v2[j]; 52016ebf90aSShri Abhyankar } 52116ebf90aSShri Abhyankar irow++; 52216ebf90aSShri Abhyankar } 52316ebf90aSShri Abhyankar PetscFunctionReturn(0); 52416ebf90aSShri Abhyankar } 52516ebf90aSShri Abhyankar 526bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 52716ebf90aSShri Abhyankar { 52816ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 52916ebf90aSShri Abhyankar PetscErrorCode ierr; 53016ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 53116ebf90aSShri Abhyankar PetscInt *row,*col; 53216ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 53316ebf90aSShri Abhyankar PetscScalar *val; 53416ebf90aSShri Abhyankar Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 53516ebf90aSShri Abhyankar Mat_SeqAIJ *aa = (Mat_SeqAIJ*)(mat->A)->data; 53616ebf90aSShri Abhyankar Mat_SeqAIJ *bb = (Mat_SeqAIJ*)(mat->B)->data; 53716ebf90aSShri Abhyankar 53816ebf90aSShri Abhyankar PetscFunctionBegin; 53916ebf90aSShri Abhyankar ai=aa->i; aj=aa->j; bi=bb->i; bj=bb->j; rstart= A->rmap->rstart; 54016ebf90aSShri Abhyankar av=aa->a; bv=bb->a; 54116ebf90aSShri Abhyankar 5422205254eSKarl Rupp garray = mat->garray; 5432205254eSKarl Rupp 544bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 54516ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 54616ebf90aSShri Abhyankar *nnz = nz; 547185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 548185f6596SHong Zhang col = row + nz; 549185f6596SHong Zhang val = (PetscScalar*)(col + nz); 550185f6596SHong Zhang 55116ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 55216ebf90aSShri Abhyankar } else { 55316ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 55416ebf90aSShri Abhyankar } 55516ebf90aSShri Abhyankar 55616ebf90aSShri Abhyankar jj = 0; irow = rstart; 55716ebf90aSShri Abhyankar for (i=0; i<m; i++) { 55816ebf90aSShri Abhyankar ajj = aj + ai[i]; /* ptr to the beginning of this row */ 55916ebf90aSShri Abhyankar countA = ai[i+1] - ai[i]; 56016ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 56116ebf90aSShri Abhyankar bjj = bj + bi[i]; 56216ebf90aSShri Abhyankar v1 = av + ai[i]; 56316ebf90aSShri Abhyankar v2 = bv + bi[i]; 56416ebf90aSShri Abhyankar 56516ebf90aSShri Abhyankar /* A-part */ 56616ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 567bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 56816ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 56916ebf90aSShri Abhyankar } 57016ebf90aSShri Abhyankar val[jj++] = v1[j]; 57116ebf90aSShri Abhyankar } 57216ebf90aSShri Abhyankar 57316ebf90aSShri Abhyankar /* B-part */ 57416ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 575bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 57616ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 57716ebf90aSShri Abhyankar } 57816ebf90aSShri Abhyankar val[jj++] = v2[j]; 57916ebf90aSShri Abhyankar } 58016ebf90aSShri Abhyankar irow++; 58116ebf90aSShri Abhyankar } 58216ebf90aSShri Abhyankar PetscFunctionReturn(0); 58316ebf90aSShri Abhyankar } 58416ebf90aSShri Abhyankar 585bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpibaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 58667877ebaSShri Abhyankar { 58767877ebaSShri Abhyankar Mat_MPIBAIJ *mat = (Mat_MPIBAIJ*)A->data; 58867877ebaSShri Abhyankar Mat_SeqBAIJ *aa = (Mat_SeqBAIJ*)(mat->A)->data; 58967877ebaSShri Abhyankar Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 59067877ebaSShri Abhyankar const PetscInt *ai = aa->i, *bi = bb->i, *aj = aa->j, *bj = bb->j,*ajj, *bjj; 591d985c460SShri Abhyankar const PetscInt *garray = mat->garray,mbs=mat->mbs,rstart=A->rmap->rstart; 59233d57670SJed Brown const PetscInt bs2=mat->bs2; 59367877ebaSShri Abhyankar PetscErrorCode ierr; 59433d57670SJed Brown PetscInt bs,nz,i,j,k,n,jj,irow,countA,countB,idx; 59567877ebaSShri Abhyankar PetscInt *row,*col; 59667877ebaSShri Abhyankar const PetscScalar *av=aa->a, *bv=bb->a,*v1,*v2; 59767877ebaSShri Abhyankar PetscScalar *val; 59867877ebaSShri Abhyankar 59967877ebaSShri Abhyankar PetscFunctionBegin; 60033d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 601bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 60267877ebaSShri Abhyankar nz = bs2*(aa->nz + bb->nz); 60367877ebaSShri Abhyankar *nnz = nz; 604185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 605185f6596SHong Zhang col = row + nz; 606185f6596SHong Zhang val = (PetscScalar*)(col + nz); 607185f6596SHong Zhang 60867877ebaSShri Abhyankar *r = row; *c = col; *v = val; 60967877ebaSShri Abhyankar } else { 61067877ebaSShri Abhyankar row = *r; col = *c; val = *v; 61167877ebaSShri Abhyankar } 61267877ebaSShri Abhyankar 613d985c460SShri Abhyankar jj = 0; irow = rstart; 61467877ebaSShri Abhyankar for (i=0; i<mbs; i++) { 61567877ebaSShri Abhyankar countA = ai[i+1] - ai[i]; 61667877ebaSShri Abhyankar countB = bi[i+1] - bi[i]; 61767877ebaSShri Abhyankar ajj = aj + ai[i]; 61867877ebaSShri Abhyankar bjj = bj + bi[i]; 61967877ebaSShri Abhyankar v1 = av + bs2*ai[i]; 62067877ebaSShri Abhyankar v2 = bv + bs2*bi[i]; 62167877ebaSShri Abhyankar 62267877ebaSShri Abhyankar idx = 0; 62367877ebaSShri Abhyankar /* A-part */ 62467877ebaSShri Abhyankar for (k=0; k<countA; k++) { 62567877ebaSShri Abhyankar for (j=0; j<bs; j++) { 62667877ebaSShri Abhyankar for (n=0; n<bs; n++) { 627bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 628d985c460SShri Abhyankar row[jj] = irow + n + shift; 629d985c460SShri Abhyankar col[jj] = rstart + bs*ajj[k] + j + shift; 63067877ebaSShri Abhyankar } 63167877ebaSShri Abhyankar val[jj++] = v1[idx++]; 63267877ebaSShri Abhyankar } 63367877ebaSShri Abhyankar } 63467877ebaSShri Abhyankar } 63567877ebaSShri Abhyankar 63667877ebaSShri Abhyankar idx = 0; 63767877ebaSShri Abhyankar /* B-part */ 63867877ebaSShri Abhyankar for (k=0; k<countB; k++) { 63967877ebaSShri Abhyankar for (j=0; j<bs; j++) { 64067877ebaSShri Abhyankar for (n=0; n<bs; n++) { 641bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 642d985c460SShri Abhyankar row[jj] = irow + n + shift; 643d985c460SShri Abhyankar col[jj] = bs*garray[bjj[k]] + j + shift; 64467877ebaSShri Abhyankar } 645d985c460SShri Abhyankar val[jj++] = v2[idx++]; 64667877ebaSShri Abhyankar } 64767877ebaSShri Abhyankar } 64867877ebaSShri Abhyankar } 649d985c460SShri Abhyankar irow += bs; 65067877ebaSShri Abhyankar } 65167877ebaSShri Abhyankar PetscFunctionReturn(0); 65267877ebaSShri Abhyankar } 65367877ebaSShri Abhyankar 654bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 65516ebf90aSShri Abhyankar { 65616ebf90aSShri Abhyankar const PetscInt *ai, *aj,*adiag, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 65716ebf90aSShri Abhyankar PetscErrorCode ierr; 658e0bace9bSHong Zhang PetscInt rstart,nz,nza,nzb,i,j,jj,irow,countA,countB; 65916ebf90aSShri Abhyankar PetscInt *row,*col; 66016ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 66116ebf90aSShri Abhyankar PetscScalar *val; 66216ebf90aSShri Abhyankar Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 66316ebf90aSShri Abhyankar Mat_SeqAIJ *aa =(Mat_SeqAIJ*)(mat->A)->data; 66416ebf90aSShri Abhyankar Mat_SeqAIJ *bb =(Mat_SeqAIJ*)(mat->B)->data; 66516ebf90aSShri Abhyankar 66616ebf90aSShri Abhyankar PetscFunctionBegin; 66716ebf90aSShri Abhyankar ai=aa->i; aj=aa->j; adiag=aa->diag; 66816ebf90aSShri Abhyankar bi=bb->i; bj=bb->j; garray = mat->garray; 66916ebf90aSShri Abhyankar av=aa->a; bv=bb->a; 6702205254eSKarl Rupp 67116ebf90aSShri Abhyankar rstart = A->rmap->rstart; 67216ebf90aSShri Abhyankar 673bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 674e0bace9bSHong Zhang nza = 0; /* num of upper triangular entries in mat->A, including diagonals */ 675e0bace9bSHong Zhang nzb = 0; /* num of upper triangular entries in mat->B */ 67616ebf90aSShri Abhyankar for (i=0; i<m; i++) { 677e0bace9bSHong Zhang nza += (ai[i+1] - adiag[i]); 67816ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 67916ebf90aSShri Abhyankar bjj = bj + bi[i]; 680e0bace9bSHong Zhang for (j=0; j<countB; j++) { 681e0bace9bSHong Zhang if (garray[bjj[j]] > rstart) nzb++; 682e0bace9bSHong Zhang } 683e0bace9bSHong Zhang } 68416ebf90aSShri Abhyankar 685e0bace9bSHong Zhang nz = nza + nzb; /* total nz of upper triangular part of mat */ 68616ebf90aSShri Abhyankar *nnz = nz; 687185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 688185f6596SHong Zhang col = row + nz; 689185f6596SHong Zhang val = (PetscScalar*)(col + nz); 690185f6596SHong Zhang 69116ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 69216ebf90aSShri Abhyankar } else { 69316ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 69416ebf90aSShri Abhyankar } 69516ebf90aSShri Abhyankar 69616ebf90aSShri Abhyankar jj = 0; irow = rstart; 69716ebf90aSShri Abhyankar for (i=0; i<m; i++) { 69816ebf90aSShri Abhyankar ajj = aj + adiag[i]; /* ptr to the beginning of the diagonal of this row */ 69916ebf90aSShri Abhyankar v1 = av + adiag[i]; 70016ebf90aSShri Abhyankar countA = ai[i+1] - adiag[i]; 70116ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 70216ebf90aSShri Abhyankar bjj = bj + bi[i]; 70316ebf90aSShri Abhyankar v2 = bv + bi[i]; 70416ebf90aSShri Abhyankar 70516ebf90aSShri Abhyankar /* A-part */ 70616ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 707bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 70816ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 70916ebf90aSShri Abhyankar } 71016ebf90aSShri Abhyankar val[jj++] = v1[j]; 71116ebf90aSShri Abhyankar } 71216ebf90aSShri Abhyankar 71316ebf90aSShri Abhyankar /* B-part */ 71416ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 71516ebf90aSShri Abhyankar if (garray[bjj[j]] > rstart) { 716bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 71716ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 71816ebf90aSShri Abhyankar } 71916ebf90aSShri Abhyankar val[jj++] = v2[j]; 72016ebf90aSShri Abhyankar } 721397b6df1SKris Buschelman } 722397b6df1SKris Buschelman irow++; 723397b6df1SKris Buschelman } 724397b6df1SKris Buschelman PetscFunctionReturn(0); 725397b6df1SKris Buschelman } 726397b6df1SKris Buschelman 727dfbe8321SBarry Smith PetscErrorCode MatDestroy_MUMPS(Mat A) 728dfbe8321SBarry Smith { 729e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 730dfbe8321SBarry Smith PetscErrorCode ierr; 731b24902e0SBarry Smith 732397b6df1SKris Buschelman PetscFunctionBegin; 733a5e57a09SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 734a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_rhs);CHKERRQ(ierr); 735a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 736801fbe65SHong Zhang ierr = VecDestroy(&mumps->b_seq);CHKERRQ(ierr); 737a5e57a09SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 738a5e57a09SHong Zhang ierr = PetscFree(mumps->id.perm_in);CHKERRQ(ierr); 739a5e57a09SHong Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); 740b34f08ffSHong Zhang ierr = PetscFree(mumps->info);CHKERRQ(ierr); 74159ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 742a5e57a09SHong Zhang mumps->id.job = JOB_END; 7433ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 7443ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 7453ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { ierr = PetscOmpCtrlDestroy(&mumps->omp_ctrl);CHKERRQ(ierr); } 7463ab56b82SJunchao Zhang #endif 7473ab56b82SJunchao Zhang ierr = PetscFree2(mumps->recvcount,mumps->displs);CHKERRQ(ierr); 748e69c285eSBarry Smith ierr = PetscFree(A->data);CHKERRQ(ierr); 749bf0cc555SLisandro Dalcin 75097969023SHong Zhang /* clear composed functions */ 7513ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 7525a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSetSchurIS_C",NULL);CHKERRQ(ierr); 7535a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorCreateSchurComplement_C",NULL);CHKERRQ(ierr); 754bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetIcntl_C",NULL);CHKERRQ(ierr); 755bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetIcntl_C",NULL);CHKERRQ(ierr); 756bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetCntl_C",NULL);CHKERRQ(ierr); 757bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetCntl_C",NULL);CHKERRQ(ierr); 758ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfo_C",NULL);CHKERRQ(ierr); 759ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfog_C",NULL);CHKERRQ(ierr); 760ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfo_C",NULL);CHKERRQ(ierr); 761ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfog_C",NULL);CHKERRQ(ierr); 76289a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverse_C",NULL);CHKERRQ(ierr); 7630e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverseTranspose_C",NULL);CHKERRQ(ierr); 764397b6df1SKris Buschelman PetscFunctionReturn(0); 765397b6df1SKris Buschelman } 766397b6df1SKris Buschelman 767b24902e0SBarry Smith PetscErrorCode MatSolve_MUMPS(Mat A,Vec b,Vec x) 768b24902e0SBarry Smith { 769e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 770d54de34fSKris Buschelman PetscScalar *array; 77167877ebaSShri Abhyankar Vec b_seq; 772329ec9b3SHong Zhang IS is_iden,is_petsc; 773dfbe8321SBarry Smith PetscErrorCode ierr; 774329ec9b3SHong Zhang PetscInt i; 775cc86f929SStefano Zampini PetscBool second_solve = PETSC_FALSE; 776883f2eb9SBarry Smith static PetscBool cite1 = PETSC_FALSE,cite2 = PETSC_FALSE; 777397b6df1SKris Buschelman 778397b6df1SKris Buschelman PetscFunctionBegin; 779883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS01,\n author = {P.~R. Amestoy and I.~S. Duff and J.-Y. L'Excellent and J. Koster},\n title = {A fully asynchronous multifrontal solver using distributed dynamic scheduling},\n journal = {SIAM Journal on Matrix Analysis and Applications},\n volume = {23},\n number = {1},\n pages = {15--41},\n year = {2001}\n}\n",&cite1);CHKERRQ(ierr); 780883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS02,\n author = {P.~R. Amestoy and A. Guermouche and J.-Y. L'Excellent and S. Pralet},\n title = {Hybrid scheduling for the parallel solution of linear systems},\n journal = {Parallel Computing},\n volume = {32},\n number = {2},\n pages = {136--156},\n year = {2006}\n}\n",&cite2);CHKERRQ(ierr); 7812aca8efcSHong Zhang 782603e8f96SBarry Smith if (A->factorerrortype) { 7832aca8efcSHong Zhang ierr = PetscInfo2(A,"MatSolve is called with singular matrix factor, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 7842aca8efcSHong Zhang ierr = VecSetInf(x);CHKERRQ(ierr); 7852aca8efcSHong Zhang PetscFunctionReturn(0); 7862aca8efcSHong Zhang } 7872aca8efcSHong Zhang 788be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 789a5e57a09SHong Zhang mumps->id.nrhs = 1; 790a5e57a09SHong Zhang b_seq = mumps->b_seq; 7912d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 792329ec9b3SHong Zhang /* MUMPS only supports centralized rhs. Scatter b into a seqential rhs vector */ 793a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 794a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 795a5e57a09SHong Zhang if (!mumps->myid) {ierr = VecGetArray(b_seq,&array);CHKERRQ(ierr);} 7963ab56b82SJunchao Zhang } else { /* petsc_size == 1 */ 797397b6df1SKris Buschelman ierr = VecCopy(b,x);CHKERRQ(ierr); 798397b6df1SKris Buschelman ierr = VecGetArray(x,&array);CHKERRQ(ierr); 799397b6df1SKris Buschelman } 800a5e57a09SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 801a5e57a09SHong Zhang mumps->id.nrhs = 1; 802940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)array; 803397b6df1SKris Buschelman } 804397b6df1SKris Buschelman 805cc86f929SStefano Zampini /* 806cc86f929SStefano Zampini handle condensation step of Schur complement (if any) 807cc86f929SStefano Zampini We set by default ICNTL(26) == -1 when Schur indices have been provided by the user. 808cc86f929SStefano Zampini According to MUMPS (5.0.0) manual, any value should be harmful during the factorization phase 809cc86f929SStefano Zampini Unless the user provides a valid value for ICNTL(26), MatSolve and MatMatSolve routines solve the full system. 810cc86f929SStefano Zampini This requires an extra call to PetscMUMPS_c and the computation of the factors for S 811cc86f929SStefano Zampini */ 812583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 8132d4298aeSJunchao Zhang if (mumps->petsc_size > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 814cc86f929SStefano Zampini second_solve = PETSC_TRUE; 815b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 816cc86f929SStefano Zampini } 817397b6df1SKris Buschelman /* solve phase */ 818329ec9b3SHong Zhang /*-------------*/ 819a5e57a09SHong Zhang mumps->id.job = JOB_SOLVE; 8203ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 821a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 822397b6df1SKris Buschelman 823b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 824cc86f929SStefano Zampini if (second_solve) { 825b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 826cc86f929SStefano Zampini } 827b5fa320bSStefano Zampini 8282d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { /* convert mumps distributed solution to petsc mpi x */ 829a5e57a09SHong Zhang if (mumps->scat_sol && mumps->ICNTL9_pre != mumps->id.ICNTL(9)) { 830a5e57a09SHong Zhang /* when id.ICNTL(9) changes, the contents of lsol_loc may change (not its size, lsol_loc), recreates scat_sol */ 831a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 832397b6df1SKris Buschelman } 833a5e57a09SHong Zhang if (!mumps->scat_sol) { /* create scatter scat_sol */ 834a5e57a09SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,mumps->id.lsol_loc,0,1,&is_iden);CHKERRQ(ierr); /* from */ 835a5e57a09SHong Zhang for (i=0; i<mumps->id.lsol_loc; i++) { 836a5e57a09SHong Zhang mumps->id.isol_loc[i] -= 1; /* change Fortran style to C style */ 837a5e57a09SHong Zhang } 838a5e57a09SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,mumps->id.lsol_loc,mumps->id.isol_loc,PETSC_COPY_VALUES,&is_petsc);CHKERRQ(ierr); /* to */ 8399448b7f1SJunchao Zhang ierr = VecScatterCreate(mumps->x_seq,is_iden,x,is_petsc,&mumps->scat_sol);CHKERRQ(ierr); 8406bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 8416bf464f9SBarry Smith ierr = ISDestroy(&is_petsc);CHKERRQ(ierr); 8422205254eSKarl Rupp 843a5e57a09SHong Zhang mumps->ICNTL9_pre = mumps->id.ICNTL(9); /* save current value of id.ICNTL(9) */ 844397b6df1SKris Buschelman } 845a5e57a09SHong Zhang 846a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 847a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 848329ec9b3SHong Zhang } 849353d7d71SJunchao Zhang 850353d7d71SJunchao Zhang if (mumps->petsc_size > 1) {if (!mumps->myid) {ierr = VecRestoreArray(b_seq,&array);CHKERRQ(ierr);}} 851353d7d71SJunchao Zhang else {ierr = VecRestoreArray(x,&array);CHKERRQ(ierr);} 852353d7d71SJunchao Zhang 8539880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*mumps->id.RINFO(3));CHKERRQ(ierr); 854397b6df1SKris Buschelman PetscFunctionReturn(0); 855397b6df1SKris Buschelman } 856397b6df1SKris Buschelman 85751d5961aSHong Zhang PetscErrorCode MatSolveTranspose_MUMPS(Mat A,Vec b,Vec x) 85851d5961aSHong Zhang { 859e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 86051d5961aSHong Zhang PetscErrorCode ierr; 86151d5961aSHong Zhang 86251d5961aSHong Zhang PetscFunctionBegin; 863a5e57a09SHong Zhang mumps->id.ICNTL(9) = 0; 8640ad0caddSJed Brown ierr = MatSolve_MUMPS(A,b,x);CHKERRQ(ierr); 865a5e57a09SHong Zhang mumps->id.ICNTL(9) = 1; 86651d5961aSHong Zhang PetscFunctionReturn(0); 86751d5961aSHong Zhang } 86851d5961aSHong Zhang 869e0b74bf9SHong Zhang PetscErrorCode MatMatSolve_MUMPS(Mat A,Mat B,Mat X) 870e0b74bf9SHong Zhang { 871bda8bf91SBarry Smith PetscErrorCode ierr; 872b8491c3eSStefano Zampini Mat Bt = NULL; 873b8491c3eSStefano Zampini PetscBool flg, flgT; 874e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 875334c5f61SHong Zhang PetscInt i,nrhs,M; 8761683a169SBarry Smith PetscScalar *array; 8771683a169SBarry Smith const PetscScalar *rbray; 8785b7de3c2SKarl Rupp PetscInt lsol_loc,nlsol_loc,*isol_loc,*idxx,*isol_loc_save,iidx = 0; 8791683a169SBarry Smith PetscScalar *bray,*sol_loc,*sol_loc_save; 880be818407SHong Zhang IS is_to,is_from; 881beae5ec0SHong Zhang PetscInt k,proc,j,m,myrstart; 882be818407SHong Zhang const PetscInt *rstart; 883beae5ec0SHong Zhang Vec v_mpi,b_seq,msol_loc; 884be818407SHong Zhang VecScatter scat_rhs,scat_sol; 885be818407SHong Zhang PetscScalar *aa; 886be818407SHong Zhang PetscInt spnr,*ia,*ja; 887d56c302dSHong Zhang Mat_MPIAIJ *b = NULL; 888bda8bf91SBarry Smith 889e0b74bf9SHong Zhang PetscFunctionBegin; 890be818407SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)X,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 891be818407SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_ARG_WRONG,"Matrix X must be MATDENSE matrix"); 892be818407SHong Zhang 8930298fd71SBarry Smith ierr = PetscObjectTypeCompareAny((PetscObject)B,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 894be818407SHong Zhang if (flg) { /* dense B */ 895c0be3364SHong Zhang if (B->rmap->n != X->rmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Matrix B and X must have same row distribution"); 896be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 8970e6b8875SHong Zhang } else { /* sparse B */ 898be818407SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)B,MATTRANSPOSEMAT,&flgT);CHKERRQ(ierr); 8990e6b8875SHong Zhang if (flgT) { /* input B is transpose of actural RHS matrix, 9000e6b8875SHong Zhang because mumps requires sparse compressed COLUMN storage! See MatMatTransposeSolve_MUMPS() */ 901be818407SHong Zhang ierr = MatTransposeGetMat(B,&Bt);CHKERRQ(ierr); 9020f52d626SJunchao Zhang } else SETERRQ(PetscObjectComm((PetscObject)B),PETSC_ERR_ARG_WRONG,"Matrix B must be MATTRANSPOSEMAT matrix"); 903be818407SHong Zhang mumps->id.ICNTL(20)= 1; /* sparse RHS */ 904b8491c3eSStefano Zampini } 90587b22cf4SHong Zhang 9069481e6e9SHong Zhang ierr = MatGetSize(B,&M,&nrhs);CHKERRQ(ierr); 9079481e6e9SHong Zhang mumps->id.nrhs = nrhs; 9089481e6e9SHong Zhang mumps->id.lrhs = M; 9092b691707SHong Zhang mumps->id.rhs = NULL; 9109481e6e9SHong Zhang 9112d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 912b8491c3eSStefano Zampini PetscScalar *aa; 913b8491c3eSStefano Zampini PetscInt spnr,*ia,*ja; 914e94cce23SStefano Zampini PetscBool second_solve = PETSC_FALSE; 915b8491c3eSStefano Zampini 9162cd7d884SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 917b8491c3eSStefano Zampini mumps->id.rhs = (MumpsScalar*)array; 9182b691707SHong Zhang 9192b691707SHong Zhang if (!Bt) { /* dense B */ 9202b691707SHong Zhang /* copy B to X */ 9211683a169SBarry Smith ierr = MatDenseGetArrayRead(B,&rbray);CHKERRQ(ierr); 922580bdb30SBarry Smith ierr = PetscArraycpy(array,rbray,M*nrhs);CHKERRQ(ierr); 9231683a169SBarry Smith ierr = MatDenseRestoreArrayRead(B,&rbray);CHKERRQ(ierr); 9242b691707SHong Zhang } else { /* sparse B */ 925b8491c3eSStefano Zampini ierr = MatSeqAIJGetArray(Bt,&aa);CHKERRQ(ierr); 926be818407SHong Zhang ierr = MatGetRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 927c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 9282b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 929b8491c3eSStefano Zampini mumps->id.irhs_ptr = ia; 930b8491c3eSStefano Zampini mumps->id.irhs_sparse = ja; 931b8491c3eSStefano Zampini mumps->id.nz_rhs = ia[spnr] - 1; 932b8491c3eSStefano Zampini mumps->id.rhs_sparse = (MumpsScalar*)aa; 933b8491c3eSStefano Zampini } 934e94cce23SStefano Zampini /* handle condensation step of Schur complement (if any) */ 935583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 936e94cce23SStefano Zampini second_solve = PETSC_TRUE; 937b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 938e94cce23SStefano Zampini } 9392cd7d884SHong Zhang /* solve phase */ 9402cd7d884SHong Zhang /*-------------*/ 9412cd7d884SHong Zhang mumps->id.job = JOB_SOLVE; 9423ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 9432cd7d884SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 944b5fa320bSStefano Zampini 945b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 946e94cce23SStefano Zampini if (second_solve) { 947b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 948e94cce23SStefano Zampini } 9492b691707SHong Zhang if (Bt) { /* sparse B */ 950b8491c3eSStefano Zampini ierr = MatSeqAIJRestoreArray(Bt,&aa);CHKERRQ(ierr); 951be818407SHong Zhang ierr = MatRestoreRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 952c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 953b8491c3eSStefano Zampini } 9542cd7d884SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 955be818407SHong Zhang PetscFunctionReturn(0); 956be818407SHong Zhang } 957801fbe65SHong Zhang 958be818407SHong Zhang /*--------- parallel case: MUMPS requires rhs B to be centralized on the host! --------*/ 9592d4298aeSJunchao Zhang if (mumps->petsc_size > 1 && mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 960241dbb5eSStefano Zampini 961beae5ec0SHong Zhang /* create msol_loc to hold mumps local solution */ 9621683a169SBarry Smith isol_loc_save = mumps->id.isol_loc; /* save it for MatSolve() */ 9631683a169SBarry Smith sol_loc_save = (PetscScalar*)mumps->id.sol_loc; 964801fbe65SHong Zhang 965a1dfcbd9SJunchao Zhang lsol_loc = mumps->id.lsol_loc; 96671aed81dSHong Zhang nlsol_loc = nrhs*lsol_loc; /* length of sol_loc */ 967a1dfcbd9SJunchao Zhang ierr = PetscMalloc2(nlsol_loc,&sol_loc,lsol_loc,&isol_loc);CHKERRQ(ierr); 968940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 969801fbe65SHong Zhang mumps->id.isol_loc = isol_loc; 970801fbe65SHong Zhang 971beae5ec0SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,nlsol_loc,(PetscScalar*)sol_loc,&msol_loc);CHKERRQ(ierr); 9722cd7d884SHong Zhang 9732b691707SHong Zhang if (!Bt) { /* dense B */ 974*80577c12SJunchao Zhang /* TODO: Because of non-contiguous indices, the created vecscatter scat_rhs is not done in MPI_Gather, resulting in 975*80577c12SJunchao Zhang very inefficient communication. An optimization is to use VecScatterCreateToZero to gather B to rank 0. Then on rank 976*80577c12SJunchao Zhang 0, re-arrange B into desired order, which is a local operation. 977*80577c12SJunchao Zhang */ 978*80577c12SJunchao Zhang 979beae5ec0SHong Zhang /* scatter v_mpi to b_seq because MUMPS only supports centralized rhs */ 980be818407SHong Zhang /* wrap dense rhs matrix B into a vector v_mpi */ 9812b691707SHong Zhang ierr = MatGetLocalSize(B,&m,NULL);CHKERRQ(ierr); 9822b691707SHong Zhang ierr = MatDenseGetArray(B,&bray);CHKERRQ(ierr); 9832b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)B),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 9842b691707SHong Zhang ierr = MatDenseRestoreArray(B,&bray);CHKERRQ(ierr); 9852b691707SHong Zhang 986be818407SHong Zhang /* scatter v_mpi to b_seq in proc[0]. MUMPS requires rhs to be centralized on the host! */ 987801fbe65SHong Zhang if (!mumps->myid) { 988beae5ec0SHong Zhang PetscInt *idx; 989beae5ec0SHong Zhang /* idx: maps from k-th index of v_mpi to (i,j)-th global entry of B */ 990beae5ec0SHong Zhang ierr = PetscMalloc1(nrhs*M,&idx);CHKERRQ(ierr); 991be818407SHong Zhang ierr = MatGetOwnershipRanges(B,&rstart);CHKERRQ(ierr); 992be818407SHong Zhang k = 0; 9932d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 994be818407SHong Zhang for (j=0; j<nrhs; j++){ 995beae5ec0SHong Zhang for (i=rstart[proc]; i<rstart[proc+1]; i++) idx[k++] = j*M + i; 996be818407SHong Zhang } 997be818407SHong Zhang } 998be818407SHong Zhang 999334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,nrhs*M,&b_seq);CHKERRQ(ierr); 1000beae5ec0SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nrhs*M,idx,PETSC_OWN_POINTER,&is_to);CHKERRQ(ierr); 1001801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nrhs*M,0,1,&is_from);CHKERRQ(ierr); 1002801fbe65SHong Zhang } else { 1003334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&b_seq);CHKERRQ(ierr); 1004801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_to);CHKERRQ(ierr); 1005801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_from);CHKERRQ(ierr); 1006801fbe65SHong Zhang } 10079448b7f1SJunchao Zhang ierr = VecScatterCreate(v_mpi,is_from,b_seq,is_to,&scat_rhs);CHKERRQ(ierr); 1008334c5f61SHong Zhang ierr = VecScatterBegin(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1009801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1010801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1011334c5f61SHong Zhang ierr = VecScatterEnd(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1012801fbe65SHong Zhang 1013801fbe65SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 1014334c5f61SHong Zhang ierr = VecGetArray(b_seq,&bray);CHKERRQ(ierr); 1015940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)bray; 1016334c5f61SHong Zhang ierr = VecRestoreArray(b_seq,&bray);CHKERRQ(ierr); 1017801fbe65SHong Zhang } 1018801fbe65SHong Zhang 10192b691707SHong Zhang } else { /* sparse B */ 10202b691707SHong Zhang b = (Mat_MPIAIJ*)Bt->data; 10212b691707SHong Zhang 1022be818407SHong Zhang /* wrap dense X into a vector v_mpi */ 10232b691707SHong Zhang ierr = MatGetLocalSize(X,&m,NULL);CHKERRQ(ierr); 10242b691707SHong Zhang ierr = MatDenseGetArray(X,&bray);CHKERRQ(ierr); 10252b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)X),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 10262b691707SHong Zhang ierr = MatDenseRestoreArray(X,&bray);CHKERRQ(ierr); 10272b691707SHong Zhang 10282b691707SHong Zhang if (!mumps->myid) { 10292b691707SHong Zhang ierr = MatSeqAIJGetArray(b->A,&aa);CHKERRQ(ierr); 1030be818407SHong Zhang ierr = MatGetRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1031c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 10322b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 10332b691707SHong Zhang mumps->id.irhs_ptr = ia; 10342b691707SHong Zhang mumps->id.irhs_sparse = ja; 10352b691707SHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 10362b691707SHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 10372b691707SHong Zhang } else { 10382b691707SHong Zhang mumps->id.irhs_ptr = NULL; 10392b691707SHong Zhang mumps->id.irhs_sparse = NULL; 10402b691707SHong Zhang mumps->id.nz_rhs = 0; 10412b691707SHong Zhang mumps->id.rhs_sparse = NULL; 10422b691707SHong Zhang } 10432b691707SHong Zhang } 10442b691707SHong Zhang 1045801fbe65SHong Zhang /* solve phase */ 1046801fbe65SHong Zhang /*-------------*/ 1047801fbe65SHong Zhang mumps->id.job = JOB_SOLVE; 10483ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1049801fbe65SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 1050801fbe65SHong Zhang 1051334c5f61SHong Zhang /* scatter mumps distributed solution to petsc vector v_mpi, which shares local arrays with solution matrix X */ 105274f0fcc7SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 105374f0fcc7SHong Zhang ierr = VecPlaceArray(v_mpi,array);CHKERRQ(ierr); 1054801fbe65SHong Zhang 1055334c5f61SHong Zhang /* create scatter scat_sol */ 1056be818407SHong Zhang ierr = MatGetOwnershipRanges(X,&rstart);CHKERRQ(ierr); 1057beae5ec0SHong Zhang /* iidx: index for scatter mumps solution to petsc X */ 1058beae5ec0SHong Zhang 1059beae5ec0SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nlsol_loc,0,1,&is_from);CHKERRQ(ierr); 1060beae5ec0SHong Zhang ierr = PetscMalloc1(nlsol_loc,&idxx);CHKERRQ(ierr); 1061beae5ec0SHong Zhang for (i=0; i<lsol_loc; i++) { 1062beae5ec0SHong Zhang isol_loc[i] -= 1; /* change Fortran style to C style. isol_loc[i+j*lsol_loc] contains x[isol_loc[i]] in j-th vector */ 1063beae5ec0SHong Zhang 10642d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 1065beae5ec0SHong Zhang if (isol_loc[i] >= rstart[proc] && isol_loc[i] < rstart[proc+1]) { 1066beae5ec0SHong Zhang myrstart = rstart[proc]; 1067beae5ec0SHong Zhang k = isol_loc[i] - myrstart; /* local index on 1st column of petsc vector X */ 1068beae5ec0SHong Zhang iidx = k + myrstart*nrhs; /* maps mumps isol_loc[i] to petsc index in X */ 1069beae5ec0SHong Zhang m = rstart[proc+1] - rstart[proc]; /* rows of X for this proc */ 1070beae5ec0SHong Zhang break; 1071be818407SHong Zhang } 1072be818407SHong Zhang } 1073be818407SHong Zhang 1074beae5ec0SHong Zhang for (j=0; j<nrhs; j++) idxx[i+j*lsol_loc] = iidx + j*m; 1075801fbe65SHong Zhang } 1076be818407SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nlsol_loc,idxx,PETSC_COPY_VALUES,&is_to);CHKERRQ(ierr); 1077beae5ec0SHong Zhang ierr = VecScatterCreate(msol_loc,is_from,v_mpi,is_to,&scat_sol);CHKERRQ(ierr); 1078beae5ec0SHong Zhang ierr = VecScatterBegin(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1079801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1080801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1081beae5ec0SHong Zhang ierr = VecScatterEnd(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1082801fbe65SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 108371aed81dSHong Zhang 108471aed81dSHong Zhang /* free spaces */ 10851683a169SBarry Smith mumps->id.sol_loc = (MumpsScalar*)sol_loc_save; 108671aed81dSHong Zhang mumps->id.isol_loc = isol_loc_save; 108771aed81dSHong Zhang 108871aed81dSHong Zhang ierr = PetscFree2(sol_loc,isol_loc);CHKERRQ(ierr); 1089801fbe65SHong Zhang ierr = PetscFree(idxx);CHKERRQ(ierr); 1090beae5ec0SHong Zhang ierr = VecDestroy(&msol_loc);CHKERRQ(ierr); 109174f0fcc7SHong Zhang ierr = VecDestroy(&v_mpi);CHKERRQ(ierr); 10922b691707SHong Zhang if (Bt) { 10932b691707SHong Zhang if (!mumps->myid) { 1094d56c302dSHong Zhang b = (Mat_MPIAIJ*)Bt->data; 10952b691707SHong Zhang ierr = MatSeqAIJRestoreArray(b->A,&aa);CHKERRQ(ierr); 1096be818407SHong Zhang ierr = MatRestoreRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1097c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 10982b691707SHong Zhang } 10992b691707SHong Zhang } else { 1100334c5f61SHong Zhang ierr = VecDestroy(&b_seq);CHKERRQ(ierr); 1101334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_rhs);CHKERRQ(ierr); 11022b691707SHong Zhang } 1103334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_sol);CHKERRQ(ierr); 11049880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*nrhs*mumps->id.RINFO(3));CHKERRQ(ierr); 1105e0b74bf9SHong Zhang PetscFunctionReturn(0); 1106e0b74bf9SHong Zhang } 1107e0b74bf9SHong Zhang 1108eb3ef3b2SHong Zhang PetscErrorCode MatMatTransposeSolve_MUMPS(Mat A,Mat Bt,Mat X) 1109eb3ef3b2SHong Zhang { 1110eb3ef3b2SHong Zhang PetscErrorCode ierr; 1111eb3ef3b2SHong Zhang PetscBool flg; 1112eb3ef3b2SHong Zhang Mat B; 1113eb3ef3b2SHong Zhang 1114eb3ef3b2SHong Zhang PetscFunctionBegin; 1115eb3ef3b2SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)Bt,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 1116eb3ef3b2SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)Bt),PETSC_ERR_ARG_WRONG,"Matrix Bt must be MATAIJ matrix"); 1117eb3ef3b2SHong Zhang 1118eb3ef3b2SHong Zhang /* Create B=Bt^T that uses Bt's data structure */ 1119eb3ef3b2SHong Zhang ierr = MatCreateTranspose(Bt,&B);CHKERRQ(ierr); 1120eb3ef3b2SHong Zhang 11210e6b8875SHong Zhang ierr = MatMatSolve_MUMPS(A,B,X);CHKERRQ(ierr); 1122eb3ef3b2SHong Zhang ierr = MatDestroy(&B);CHKERRQ(ierr); 1123eb3ef3b2SHong Zhang PetscFunctionReturn(0); 1124eb3ef3b2SHong Zhang } 1125eb3ef3b2SHong Zhang 1126ace3df97SHong Zhang #if !defined(PETSC_USE_COMPLEX) 1127a58c3f20SHong Zhang /* 1128a58c3f20SHong Zhang input: 1129a58c3f20SHong Zhang F: numeric factor 1130a58c3f20SHong Zhang output: 1131a58c3f20SHong Zhang nneg: total number of negative pivots 113219d49a3bSHong Zhang nzero: total number of zero pivots 113319d49a3bSHong Zhang npos: (global dimension of F) - nneg - nzero 1134a58c3f20SHong Zhang */ 1135dfbe8321SBarry Smith PetscErrorCode MatGetInertia_SBAIJMUMPS(Mat F,int *nneg,int *nzero,int *npos) 1136a58c3f20SHong Zhang { 1137e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1138dfbe8321SBarry Smith PetscErrorCode ierr; 1139c1490034SHong Zhang PetscMPIInt size; 1140a58c3f20SHong Zhang 1141a58c3f20SHong Zhang PetscFunctionBegin; 1142ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)F),&size);CHKERRQ(ierr); 1143bcb30aebSHong Zhang /* MUMPS 4.3.1 calls ScaLAPACK when ICNTL(13)=0 (default), which does not offer the possibility to compute the inertia of a dense matrix. Set ICNTL(13)=1 to skip ScaLAPACK */ 1144a5e57a09SHong Zhang if (size > 1 && mumps->id.ICNTL(13) != 1) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"ICNTL(13)=%d. -mat_mumps_icntl_13 must be set as 1 for correct global matrix inertia\n",mumps->id.INFOG(13)); 1145ed85ac9fSHong Zhang 1146710ac8efSHong Zhang if (nneg) *nneg = mumps->id.INFOG(12); 1147ed85ac9fSHong Zhang if (nzero || npos) { 1148ed85ac9fSHong Zhang if (mumps->id.ICNTL(24) != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"-mat_mumps_icntl_24 must be set as 1 for null pivot row detection"); 1149710ac8efSHong Zhang if (nzero) *nzero = mumps->id.INFOG(28); 1150710ac8efSHong Zhang if (npos) *npos = F->rmap->N - (mumps->id.INFOG(12) + mumps->id.INFOG(28)); 1151a58c3f20SHong Zhang } 1152a58c3f20SHong Zhang PetscFunctionReturn(0); 1153a58c3f20SHong Zhang } 115419d49a3bSHong Zhang #endif 1155a58c3f20SHong Zhang 11563ab56b82SJunchao Zhang PetscErrorCode MatMumpsGatherNonzerosOnMaster(MatReuse reuse,Mat_MUMPS *mumps) 11573ab56b82SJunchao Zhang { 11583ab56b82SJunchao Zhang PetscErrorCode ierr; 11596ac9f4daSSatish Balay PetscInt i,nz=0,*irn,*jcn=0; 11606ac9f4daSSatish Balay PetscScalar *val=0; 11613ab56b82SJunchao Zhang PetscMPIInt mpinz,*recvcount=NULL,*displs=NULL; 11623ab56b82SJunchao Zhang 11633ab56b82SJunchao Zhang PetscFunctionBegin; 11643ab56b82SJunchao Zhang if (mumps->omp_comm_size > 1) { 11653ab56b82SJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { 11663ab56b82SJunchao Zhang /* master first gathers counts of nonzeros to receive */ 11673ab56b82SJunchao Zhang if (mumps->is_omp_master) { ierr = PetscMalloc2(mumps->omp_comm_size,&recvcount,mumps->omp_comm_size,&displs);CHKERRQ(ierr); } 11683ab56b82SJunchao Zhang ierr = PetscMPIIntCast(mumps->nz,&mpinz);CHKERRQ(ierr); 11693ab56b82SJunchao Zhang ierr = MPI_Gather(&mpinz,1,MPI_INT,recvcount,1,MPI_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11703ab56b82SJunchao Zhang 11713ab56b82SJunchao Zhang /* master allocates memory to receive nonzeros */ 11723ab56b82SJunchao Zhang if (mumps->is_omp_master) { 11733ab56b82SJunchao Zhang displs[0] = 0; 11743ab56b82SJunchao Zhang for (i=1; i<mumps->omp_comm_size; i++) displs[i] = displs[i-1] + recvcount[i-1]; 11753ab56b82SJunchao Zhang nz = displs[mumps->omp_comm_size-1] + recvcount[mumps->omp_comm_size-1]; 11763ab56b82SJunchao Zhang ierr = PetscMalloc(2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar),&irn);CHKERRQ(ierr); 11773ab56b82SJunchao Zhang jcn = irn + nz; 11783ab56b82SJunchao Zhang val = (PetscScalar*)(jcn + nz); 11793ab56b82SJunchao Zhang } 11803ab56b82SJunchao Zhang 11813ab56b82SJunchao Zhang /* save the gatherv plan */ 11823ab56b82SJunchao Zhang mumps->mpinz = mpinz; /* used as send count */ 11833ab56b82SJunchao Zhang mumps->recvcount = recvcount; 11843ab56b82SJunchao Zhang mumps->displs = displs; 11853ab56b82SJunchao Zhang 11863ab56b82SJunchao Zhang /* master gathers nonzeros */ 11873ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->irn,mpinz,MPIU_INT,irn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11883ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->jcn,mpinz,MPIU_INT,jcn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11893ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->val,mpinz,MPIU_SCALAR,val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11903ab56b82SJunchao Zhang 11913ab56b82SJunchao Zhang /* master frees its row/col/val and replaces them with bigger arrays */ 11923ab56b82SJunchao Zhang if (mumps->is_omp_master) { 11933ab56b82SJunchao Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); /* irn/jcn/val are allocated together so free only irn */ 11943ab56b82SJunchao Zhang mumps->nz = nz; /* it is a sum of mpinz over omp_comm */ 11953ab56b82SJunchao Zhang mumps->irn = irn; 11963ab56b82SJunchao Zhang mumps->jcn = jcn; 11973ab56b82SJunchao Zhang mumps->val = val; 11983ab56b82SJunchao Zhang } 11993ab56b82SJunchao Zhang } else { 12003ab56b82SJunchao Zhang ierr = MPI_Gatherv((mumps->is_omp_master?MPI_IN_PLACE:mumps->val),mumps->mpinz,MPIU_SCALAR,mumps->val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12013ab56b82SJunchao Zhang } 12023ab56b82SJunchao Zhang } 12033ab56b82SJunchao Zhang PetscFunctionReturn(0); 12043ab56b82SJunchao Zhang } 12053ab56b82SJunchao Zhang 12060481f469SBarry Smith PetscErrorCode MatFactorNumeric_MUMPS(Mat F,Mat A,const MatFactorInfo *info) 1207af281ebdSHong Zhang { 1208e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)(F)->data; 12096849ba73SBarry Smith PetscErrorCode ierr; 1210ace3abfcSBarry Smith PetscBool isMPIAIJ; 1211397b6df1SKris Buschelman 1212397b6df1SKris Buschelman PetscFunctionBegin; 12136baea169SHong Zhang if (mumps->id.INFOG(1) < 0) { 12142aca8efcSHong Zhang if (mumps->id.INFOG(1) == -6) { 12152aca8efcSHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called with singular matrix structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 12166baea169SHong Zhang } 12176baea169SHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called after analysis phase fails, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 12182aca8efcSHong Zhang PetscFunctionReturn(0); 12192aca8efcSHong Zhang } 12206baea169SHong Zhang 1221a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_REUSE_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 12223ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_REUSE_MATRIX,mumps);CHKERRQ(ierr); 1223397b6df1SKris Buschelman 1224397b6df1SKris Buschelman /* numerical factorization phase */ 1225329ec9b3SHong Zhang /*-------------------------------*/ 1226a5e57a09SHong Zhang mumps->id.job = JOB_FACTNUMERIC; 12274e34a73bSHong Zhang if (!mumps->id.ICNTL(18)) { /* A is centralized */ 1228a5e57a09SHong Zhang if (!mumps->myid) { 1229940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 1230397b6df1SKris Buschelman } 1231397b6df1SKris Buschelman } else { 1232940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 1233397b6df1SKris Buschelman } 12343ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1235a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) { 1236c0d63f2fSHong Zhang if (A->erroriffailure) { 1237c0d63f2fSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 1238151787a6SHong Zhang } else { 1239c0d63f2fSHong Zhang if (mumps->id.INFOG(1) == -10) { /* numerically singular matrix */ 12402aca8efcSHong Zhang ierr = PetscInfo2(F,"matrix is numerically singular, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1241603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 1242c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -13) { 1243c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, cannot allocate required memory %d megabytes\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1244603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 1245c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -8 || mumps->id.INFOG(1) == -9 || (-16 < mumps->id.INFOG(1) && mumps->id.INFOG(1) < -10) ) { 1246c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d, problem with workarray \n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1247603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 12482aca8efcSHong Zhang } else { 1249c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1250603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 1251151787a6SHong Zhang } 12522aca8efcSHong Zhang } 1253397b6df1SKris Buschelman } 1254a5e57a09SHong Zhang if (!mumps->myid && mumps->id.ICNTL(16) > 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB," mumps->id.ICNTL(16):=%d\n",mumps->id.INFOG(16)); 1255397b6df1SKris Buschelman 1256b3cb21ddSStefano Zampini F->assembled = PETSC_TRUE; 1257a5e57a09SHong Zhang mumps->matstruc = SAME_NONZERO_PATTERN; 1258b3cb21ddSStefano Zampini if (F->schur) { /* reset Schur status to unfactored */ 1259b3cb21ddSStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 1260b3cb21ddSStefano Zampini mumps->id.ICNTL(19) = 2; 1261b3cb21ddSStefano Zampini ierr = MatTranspose(F->schur,MAT_INPLACE_MATRIX,&F->schur);CHKERRQ(ierr); 1262b3cb21ddSStefano Zampini } 1263b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,NULL,MAT_FACTOR_SCHUR_UNFACTORED);CHKERRQ(ierr); 1264b3cb21ddSStefano Zampini } 126567877ebaSShri Abhyankar 1266066565c5SStefano Zampini /* just to be sure that ICNTL(19) value returned by a call from MatMumpsGetIcntl is always consistent */ 1267066565c5SStefano Zampini if (!mumps->sym && mumps->id.ICNTL(19) && mumps->id.ICNTL(19) != 1) mumps->id.ICNTL(19) = 3; 1268066565c5SStefano Zampini 12693ab56b82SJunchao Zhang if (!mumps->is_omp_master) mumps->id.INFO(23) = 0; 12702d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 127167877ebaSShri Abhyankar PetscInt lsol_loc; 127267877ebaSShri Abhyankar PetscScalar *sol_loc; 12732205254eSKarl Rupp 1274c2093ab7SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&isMPIAIJ);CHKERRQ(ierr); 1275c2093ab7SHong Zhang 1276c2093ab7SHong Zhang /* distributed solution; Create x_seq=sol_loc for repeated use */ 1277c2093ab7SHong Zhang if (mumps->x_seq) { 1278c2093ab7SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 1279c2093ab7SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 1280c2093ab7SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 1281c2093ab7SHong Zhang } 1282a5e57a09SHong Zhang lsol_loc = mumps->id.INFO(23); /* length of sol_loc */ 1283dcca6d9dSJed Brown ierr = PetscMalloc2(lsol_loc,&sol_loc,lsol_loc,&mumps->id.isol_loc);CHKERRQ(ierr); 1284a5e57a09SHong Zhang mumps->id.lsol_loc = lsol_loc; 1285940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 1286a5e57a09SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,lsol_loc,sol_loc,&mumps->x_seq);CHKERRQ(ierr); 128767877ebaSShri Abhyankar } 12889880c9b4SStefano Zampini ierr = PetscLogFlops(mumps->id.RINFO(2));CHKERRQ(ierr); 1289397b6df1SKris Buschelman PetscFunctionReturn(0); 1290397b6df1SKris Buschelman } 1291397b6df1SKris Buschelman 12929a2535b5SHong Zhang /* Sets MUMPS options from the options database */ 12939a2535b5SHong Zhang PetscErrorCode PetscSetMUMPSFromOptions(Mat F, Mat A) 1294dcd589f8SShri Abhyankar { 1295e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1296dcd589f8SShri Abhyankar PetscErrorCode ierr; 1297a0e18203SThibaut Appel PetscInt icntl,info[80],i,ninfo=80; 1298ace3abfcSBarry Smith PetscBool flg; 1299dcd589f8SShri Abhyankar 1300dcd589f8SShri Abhyankar PetscFunctionBegin; 1301ce94432eSBarry Smith ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MUMPS Options","Mat");CHKERRQ(ierr); 13029a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_1","ICNTL(1): output stream for error messages","None",mumps->id.ICNTL(1),&icntl,&flg);CHKERRQ(ierr); 13039a2535b5SHong Zhang if (flg) mumps->id.ICNTL(1) = icntl; 13049a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_2","ICNTL(2): output stream for diagnostic printing, statistics, and warning","None",mumps->id.ICNTL(2),&icntl,&flg);CHKERRQ(ierr); 13059a2535b5SHong Zhang if (flg) mumps->id.ICNTL(2) = icntl; 13069a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_3","ICNTL(3): output stream for global information, collected on the host","None",mumps->id.ICNTL(3),&icntl,&flg);CHKERRQ(ierr); 13079a2535b5SHong Zhang if (flg) mumps->id.ICNTL(3) = icntl; 1308dcd589f8SShri Abhyankar 13099a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_4","ICNTL(4): level of printing (0 to 4)","None",mumps->id.ICNTL(4),&icntl,&flg);CHKERRQ(ierr); 13109a2535b5SHong Zhang if (flg) mumps->id.ICNTL(4) = icntl; 13119a2535b5SHong Zhang if (mumps->id.ICNTL(4) || PetscLogPrintInfo) mumps->id.ICNTL(3) = 6; /* resume MUMPS default id.ICNTL(3) = 6 */ 13129a2535b5SHong Zhang 1313d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_6","ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7)","None",mumps->id.ICNTL(6),&icntl,&flg);CHKERRQ(ierr); 13149a2535b5SHong Zhang if (flg) mumps->id.ICNTL(6) = icntl; 13159a2535b5SHong Zhang 1316d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_7","ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis","None",mumps->id.ICNTL(7),&icntl,&flg);CHKERRQ(ierr); 1317dcd589f8SShri Abhyankar if (flg) { 13182d4298aeSJunchao Zhang if (icntl== 1 && mumps->petsc_size > 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"pivot order be set by the user in PERM_IN -- not supported by the PETSc/MUMPS interface\n"); 13192205254eSKarl Rupp else mumps->id.ICNTL(7) = icntl; 1320dcd589f8SShri Abhyankar } 1321e0b74bf9SHong Zhang 13220298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_8","ICNTL(8): scaling strategy (-2 to 8 or 77)","None",mumps->id.ICNTL(8),&mumps->id.ICNTL(8),NULL);CHKERRQ(ierr); 1323d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_9","ICNTL(9): computes the solution using A or A^T","None",mumps->id.ICNTL(9),&mumps->id.ICNTL(9),NULL);CHKERRQ(ierr); handled by MatSolveTranspose_MUMPS() */ 13240298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_10","ICNTL(10): max num of refinements","None",mumps->id.ICNTL(10),&mumps->id.ICNTL(10),NULL);CHKERRQ(ierr); 1325d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_11","ICNTL(11): statistics related to an error analysis (via -ksp_view)","None",mumps->id.ICNTL(11),&mumps->id.ICNTL(11),NULL);CHKERRQ(ierr); 1326d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_12","ICNTL(12): an ordering strategy for symmetric matrices (0 to 3)","None",mumps->id.ICNTL(12),&mumps->id.ICNTL(12),NULL);CHKERRQ(ierr); 1327d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_13","ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting","None",mumps->id.ICNTL(13),&mumps->id.ICNTL(13),NULL);CHKERRQ(ierr); 1328d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_14","ICNTL(14): percentage increase in the estimated working space","None",mumps->id.ICNTL(14),&mumps->id.ICNTL(14),NULL);CHKERRQ(ierr); 1329d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_19","ICNTL(19): computes the Schur complement","None",mumps->id.ICNTL(19),&mumps->id.ICNTL(19),NULL);CHKERRQ(ierr); 133059ac8732SStefano Zampini if (mumps->id.ICNTL(19) <= 0 || mumps->id.ICNTL(19) > 3) { /* reset any schur data (if any) */ 1331b3cb21ddSStefano Zampini ierr = MatDestroy(&F->schur);CHKERRQ(ierr); 133259ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 133359ac8732SStefano Zampini } 13344e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_20","ICNTL(20): the format (dense or sparse) of the right-hand sides","None",mumps->id.ICNTL(20),&mumps->id.ICNTL(20),NULL);CHKERRQ(ierr); -- sparse rhs is not supported in PETSc API */ 1335d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_21","ICNTL(21): the distribution (centralized or distributed) of the solution vectors","None",mumps->id.ICNTL(21),&mumps->id.ICNTL(21),NULL);CHKERRQ(ierr); we only use distributed solution vector */ 13369a2535b5SHong Zhang 1337d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_22","ICNTL(22): in-core/out-of-core factorization and solve (0 or 1)","None",mumps->id.ICNTL(22),&mumps->id.ICNTL(22),NULL);CHKERRQ(ierr); 13380298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_23","ICNTL(23): max size of the working memory (MB) that can allocate per processor","None",mumps->id.ICNTL(23),&mumps->id.ICNTL(23),NULL);CHKERRQ(ierr); 13390298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_24","ICNTL(24): detection of null pivot rows (0 or 1)","None",mumps->id.ICNTL(24),&mumps->id.ICNTL(24),NULL);CHKERRQ(ierr); 13409a2535b5SHong Zhang if (mumps->id.ICNTL(24)) { 13419a2535b5SHong Zhang mumps->id.ICNTL(13) = 1; /* turn-off ScaLAPACK to help with the correct detection of null pivots */ 1342d7ebd59bSHong Zhang } 1343d7ebd59bSHong Zhang 1344b4ed93dbSHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_25","ICNTL(25): computes a solution of a deficient matrix and a null space basis","None",mumps->id.ICNTL(25),&mumps->id.ICNTL(25),NULL);CHKERRQ(ierr); 1345d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_26","ICNTL(26): drives the solution phase if a Schur complement matrix","None",mumps->id.ICNTL(26),&mumps->id.ICNTL(26),NULL);CHKERRQ(ierr); 13462cd7d884SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_27","ICNTL(27): the blocking size for multiple right-hand sides","None",mumps->id.ICNTL(27),&mumps->id.ICNTL(27),NULL);CHKERRQ(ierr); 13470298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_28","ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering","None",mumps->id.ICNTL(28),&mumps->id.ICNTL(28),NULL);CHKERRQ(ierr); 1348d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_29","ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis","None",mumps->id.ICNTL(29),&mumps->id.ICNTL(29),NULL);CHKERRQ(ierr); 134989a9c03aSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_30","ICNTL(30): compute user-specified set of entries in inv(A)","None",mumps->id.ICNTL(30),&mumps->id.ICNTL(30),NULL);CHKERRQ(ierr); */ /* call MatMumpsGetInverse() directly */ 1350d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_31","ICNTL(31): indicates which factors may be discarded during factorization","None",mumps->id.ICNTL(31),&mumps->id.ICNTL(31),NULL);CHKERRQ(ierr); 13514e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_32","ICNTL(32): performs the forward elemination of the right-hand sides during factorization","None",mumps->id.ICNTL(32),&mumps->id.ICNTL(32),NULL);CHKERRQ(ierr); -- not supported by PETSc API */ 13520298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_33","ICNTL(33): compute determinant","None",mumps->id.ICNTL(33),&mumps->id.ICNTL(33),NULL);CHKERRQ(ierr); 1353a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_35","ICNTL(35): activates Block Low Rank (BLR) based factorization","None",mumps->id.ICNTL(35),&mumps->id.ICNTL(35),NULL);CHKERRQ(ierr); 1354a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_36","ICNTL(36): choice of BLR factorization variant","None",mumps->id.ICNTL(36),&mumps->id.ICNTL(36),NULL);CHKERRQ(ierr); 1355a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_38","ICNTL(38): estimated compression rate of LU factors with BLR","None",mumps->id.ICNTL(38),&mumps->id.ICNTL(38),NULL);CHKERRQ(ierr); 1356dcd589f8SShri Abhyankar 13570298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr); 13580298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr); 13590298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr); 13600298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr); 13610298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_5","CNTL(5): fixation for null pivots","None",mumps->id.CNTL(5),&mumps->id.CNTL(5),NULL);CHKERRQ(ierr); 1362b4ed93dbSHong Zhang ierr = PetscOptionsReal("-mat_mumps_cntl_7","CNTL(7): dropping parameter used during BLR","None",mumps->id.CNTL(7),&mumps->id.CNTL(7),NULL);CHKERRQ(ierr); 1363e5bb22a1SHong Zhang 13642a808120SBarry Smith ierr = PetscOptionsString("-mat_mumps_ooc_tmpdir", "out of core directory", "None", mumps->id.ooc_tmpdir, mumps->id.ooc_tmpdir, 256, NULL);CHKERRQ(ierr); 1365b34f08ffSHong Zhang 136616d797efSHong Zhang ierr = PetscOptionsIntArray("-mat_mumps_view_info","request INFO local to each processor","",info,&ninfo,NULL);CHKERRQ(ierr); 1367b34f08ffSHong Zhang if (ninfo) { 1368a0e18203SThibaut Appel if (ninfo > 80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"number of INFO %d must <= 80\n",ninfo); 1369b34f08ffSHong Zhang ierr = PetscMalloc1(ninfo,&mumps->info);CHKERRQ(ierr); 1370b34f08ffSHong Zhang mumps->ninfo = ninfo; 1371b34f08ffSHong Zhang for (i=0; i<ninfo; i++) { 1372a0e18203SThibaut Appel if (info[i] < 0 || info[i]>80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"index of INFO %d must between 1 and 80\n",ninfo); 13732a808120SBarry Smith else mumps->info[i] = info[i]; 1374b34f08ffSHong Zhang } 1375b34f08ffSHong Zhang } 1376b34f08ffSHong Zhang 13772a808120SBarry Smith ierr = PetscOptionsEnd();CHKERRQ(ierr); 1378dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1379dcd589f8SShri Abhyankar } 1380dcd589f8SShri Abhyankar 1381f697e70eSHong Zhang PetscErrorCode PetscInitializeMUMPS(Mat A,Mat_MUMPS *mumps) 1382dcd589f8SShri Abhyankar { 1383dcd589f8SShri Abhyankar PetscErrorCode ierr; 13847c405c4aSJunchao Zhang PetscInt nthreads=0; 1385dcd589f8SShri Abhyankar 1386dcd589f8SShri Abhyankar PetscFunctionBegin; 13873ab56b82SJunchao Zhang mumps->petsc_comm = PetscObjectComm((PetscObject)A); 13883ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->petsc_comm,&mumps->petsc_size);CHKERRQ(ierr); 13893ab56b82SJunchao Zhang ierr = MPI_Comm_rank(mumps->petsc_comm,&mumps->myid);CHKERRQ(ierr); /* so that code like "if (!myid)" still works even if mumps_comm is different */ 13903ab56b82SJunchao Zhang 13917c405c4aSJunchao Zhang ierr = PetscOptionsHasName(NULL,NULL,"-mat_mumps_use_omp_threads",&mumps->use_petsc_omp_support);CHKERRQ(ierr); 13927c405c4aSJunchao Zhang if (mumps->use_petsc_omp_support) nthreads = -1; /* -1 will let PetscOmpCtrlCreate() guess a proper value when user did not supply one */ 13937c405c4aSJunchao Zhang ierr = PetscOptionsGetInt(NULL,NULL,"-mat_mumps_use_omp_threads",&nthreads,NULL);CHKERRQ(ierr); 13943ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { 13953ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 13963ab56b82SJunchao Zhang ierr = PetscOmpCtrlCreate(mumps->petsc_comm,nthreads,&mumps->omp_ctrl);CHKERRQ(ierr); 13973ab56b82SJunchao Zhang ierr = PetscOmpCtrlGetOmpComms(mumps->omp_ctrl,&mumps->omp_comm,&mumps->mumps_comm,&mumps->is_omp_master);CHKERRQ(ierr); 13983ab56b82SJunchao Zhang #else 1399217d3b1eSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP_SYS,"the system does not have PETSc OpenMP support but you added the -mat_mumps_use_omp_threads option. Configure PETSc with --with-openmp --download-hwloc (or --with-hwloc) to enable it, see more in MATSOLVERMUMPS manual\n"); 14003ab56b82SJunchao Zhang #endif 14013ab56b82SJunchao Zhang } else { 14023ab56b82SJunchao Zhang mumps->omp_comm = PETSC_COMM_SELF; 14033ab56b82SJunchao Zhang mumps->mumps_comm = mumps->petsc_comm; 14043ab56b82SJunchao Zhang mumps->is_omp_master = PETSC_TRUE; 14053ab56b82SJunchao Zhang } 14063ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->omp_comm,&mumps->omp_comm_size);CHKERRQ(ierr); 14072205254eSKarl Rupp 14082d4298aeSJunchao Zhang mumps->id.comm_fortran = MPI_Comm_c2f(mumps->mumps_comm); 1409f697e70eSHong Zhang mumps->id.job = JOB_INIT; 1410f697e70eSHong Zhang mumps->id.par = 1; /* host participates factorizaton and solve */ 1411f697e70eSHong Zhang mumps->id.sym = mumps->sym; 14123ab56b82SJunchao Zhang 14133ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 14143ab56b82SJunchao Zhang 14153ab56b82SJunchao Zhang /* copy MUMPS default control values from master to slaves. Although slaves do not call MUMPS, they may access these values in code. 14163ab56b82SJunchao Zhang For example, ICNTL(9) is initialized to 1 by MUMPS and slaves check ICNTL(9) in MatSolve_MUMPS. 14173ab56b82SJunchao Zhang */ 1418a0e18203SThibaut Appel ierr = MPI_Bcast(mumps->id.icntl,60,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 Manual Section 9 */ 14193ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.cntl, 15,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 1420f697e70eSHong Zhang 14210298fd71SBarry Smith mumps->scat_rhs = NULL; 14220298fd71SBarry Smith mumps->scat_sol = NULL; 14239a2535b5SHong Zhang 142470544d5fSHong Zhang /* set PETSc-MUMPS default options - override MUMPS default */ 14259a2535b5SHong Zhang mumps->id.ICNTL(3) = 0; 14269a2535b5SHong Zhang mumps->id.ICNTL(4) = 0; 14272d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 14289a2535b5SHong Zhang mumps->id.ICNTL(18) = 0; /* centralized assembled matrix input */ 14299a2535b5SHong Zhang } else { 14309a2535b5SHong Zhang mumps->id.ICNTL(18) = 3; /* distributed assembled matrix input */ 14314e34a73bSHong Zhang mumps->id.ICNTL(20) = 0; /* rhs is in dense format */ 143270544d5fSHong Zhang mumps->id.ICNTL(21) = 1; /* distributed solution */ 14339a2535b5SHong Zhang } 14346444a565SStefano Zampini 14356444a565SStefano Zampini /* schur */ 14366444a565SStefano Zampini mumps->id.size_schur = 0; 14376444a565SStefano Zampini mumps->id.listvar_schur = NULL; 14386444a565SStefano Zampini mumps->id.schur = NULL; 1439b5fa320bSStefano Zampini mumps->sizeredrhs = 0; 144059ac8732SStefano Zampini mumps->schur_sol = NULL; 144159ac8732SStefano Zampini mumps->schur_sizesol = 0; 1442dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1443dcd589f8SShri Abhyankar } 1444dcd589f8SShri Abhyankar 14459a625307SHong Zhang PetscErrorCode MatFactorSymbolic_MUMPS_ReportIfError(Mat F,Mat A,const MatFactorInfo *info,Mat_MUMPS *mumps) 14465cd7cf9dSHong Zhang { 14475cd7cf9dSHong Zhang PetscErrorCode ierr; 14485cd7cf9dSHong Zhang 14495cd7cf9dSHong Zhang PetscFunctionBegin; 1450a0e18203SThibaut Appel ierr = MPI_Bcast(mumps->id.infog, 80,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 manual p82 */ 14513ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.rinfog,20,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 14525cd7cf9dSHong Zhang if (mumps->id.INFOG(1) < 0) { 14535cd7cf9dSHong Zhang if (A->erroriffailure) { 14545cd7cf9dSHong Zhang SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in analysis phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 14555cd7cf9dSHong Zhang } else { 14565cd7cf9dSHong Zhang if (mumps->id.INFOG(1) == -6) { 14575cd7cf9dSHong Zhang ierr = PetscInfo2(F,"matrix is singular in structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1458603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_STRUCT_ZEROPIVOT; 14595cd7cf9dSHong Zhang } else if (mumps->id.INFOG(1) == -5 || mumps->id.INFOG(1) == -7) { 14605cd7cf9dSHong Zhang ierr = PetscInfo2(F,"problem of workspace, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1461603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 14625cd7cf9dSHong Zhang } else { 14635cd7cf9dSHong Zhang ierr = PetscInfo2(F,"Error reported by MUMPS in analysis phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1464603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 14655cd7cf9dSHong Zhang } 14665cd7cf9dSHong Zhang } 14675cd7cf9dSHong Zhang } 14685cd7cf9dSHong Zhang PetscFunctionReturn(0); 14695cd7cf9dSHong Zhang } 14705cd7cf9dSHong Zhang 1471a5e57a09SHong Zhang /* Note Petsc r(=c) permutation is used when mumps->id.ICNTL(7)==1 with centralized assembled matrix input; otherwise r and c are ignored */ 14720481f469SBarry Smith PetscErrorCode MatLUFactorSymbolic_AIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1473b24902e0SBarry Smith { 1474e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1475dcd589f8SShri Abhyankar PetscErrorCode ierr; 147667877ebaSShri Abhyankar Vec b; 147767877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1478397b6df1SKris Buschelman 1479397b6df1SKris Buschelman PetscFunctionBegin; 1480a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1481dcd589f8SShri Abhyankar 14829a2535b5SHong Zhang /* Set MUMPS options from the options database */ 14839a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1484dcd589f8SShri Abhyankar 1485a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 14863ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1487dcd589f8SShri Abhyankar 148867877ebaSShri Abhyankar /* analysis phase */ 148967877ebaSShri Abhyankar /*----------------*/ 1490a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1491a5e57a09SHong Zhang mumps->id.n = M; 1492a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 149367877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1494a5e57a09SHong Zhang if (!mumps->myid) { 1495a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1496a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1497940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 149867877ebaSShri Abhyankar } 1499a5e57a09SHong Zhang if (mumps->id.ICNTL(7) == 1) { /* use user-provide matrix ordering - assuming r = c ordering */ 15005248a706SHong Zhang /* 15015248a706SHong Zhang PetscBool flag; 15025248a706SHong Zhang ierr = ISEqual(r,c,&flag);CHKERRQ(ierr); 15035248a706SHong Zhang if (!flag) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"row_perm != col_perm"); 15045248a706SHong Zhang ierr = ISView(r,PETSC_VIEWER_STDOUT_SELF); 15055248a706SHong Zhang */ 1506a5e57a09SHong Zhang if (!mumps->myid) { 1507e0b74bf9SHong Zhang const PetscInt *idx; 1508e0b74bf9SHong Zhang PetscInt i,*perm_in; 15092205254eSKarl Rupp 1510785e854fSJed Brown ierr = PetscMalloc1(M,&perm_in);CHKERRQ(ierr); 1511e0b74bf9SHong Zhang ierr = ISGetIndices(r,&idx);CHKERRQ(ierr); 15122205254eSKarl Rupp 1513a5e57a09SHong Zhang mumps->id.perm_in = perm_in; 1514e0b74bf9SHong Zhang for (i=0; i<M; i++) perm_in[i] = idx[i]+1; /* perm_in[]: start from 1, not 0! */ 1515e0b74bf9SHong Zhang ierr = ISRestoreIndices(r,&idx);CHKERRQ(ierr); 1516e0b74bf9SHong Zhang } 1517e0b74bf9SHong Zhang } 151867877ebaSShri Abhyankar } 151967877ebaSShri Abhyankar break; 152067877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1521a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1522a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1523a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1524940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 152567877ebaSShri Abhyankar } 152667877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 15272a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 152894b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 15296bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 153067877ebaSShri Abhyankar break; 153167877ebaSShri Abhyankar } 15323ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 15335cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 153467877ebaSShri Abhyankar 1535719d5645SBarry Smith F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1536dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 153751d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 15384e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 1539eb3ef3b2SHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 1540b24902e0SBarry Smith PetscFunctionReturn(0); 1541b24902e0SBarry Smith } 1542b24902e0SBarry Smith 1543450b117fSShri Abhyankar /* Note the Petsc r and c permutations are ignored */ 1544450b117fSShri Abhyankar PetscErrorCode MatLUFactorSymbolic_BAIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1545450b117fSShri Abhyankar { 1546e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1547dcd589f8SShri Abhyankar PetscErrorCode ierr; 154867877ebaSShri Abhyankar Vec b; 154967877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1550450b117fSShri Abhyankar 1551450b117fSShri Abhyankar PetscFunctionBegin; 1552a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1553dcd589f8SShri Abhyankar 15549a2535b5SHong Zhang /* Set MUMPS options from the options database */ 15559a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1556dcd589f8SShri Abhyankar 1557a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 15583ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 155967877ebaSShri Abhyankar 156067877ebaSShri Abhyankar /* analysis phase */ 156167877ebaSShri Abhyankar /*----------------*/ 1562a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1563a5e57a09SHong Zhang mumps->id.n = M; 1564a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 156567877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1566a5e57a09SHong Zhang if (!mumps->myid) { 1567a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1568a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1569940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 157067877ebaSShri Abhyankar } 157167877ebaSShri Abhyankar } 157267877ebaSShri Abhyankar break; 157367877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1574a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1575a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1576a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1577940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 157867877ebaSShri Abhyankar } 157967877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 15802a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 158194b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 15826bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 158367877ebaSShri Abhyankar break; 158467877ebaSShri Abhyankar } 15853ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 15865cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 158767877ebaSShri Abhyankar 1588450b117fSShri Abhyankar F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1589dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 159051d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 1591450b117fSShri Abhyankar PetscFunctionReturn(0); 1592450b117fSShri Abhyankar } 1593b24902e0SBarry Smith 1594141f4205SHong Zhang /* Note the Petsc r permutation and factor info are ignored */ 159567877ebaSShri Abhyankar PetscErrorCode MatCholeskyFactorSymbolic_MUMPS(Mat F,Mat A,IS r,const MatFactorInfo *info) 1596b24902e0SBarry Smith { 1597e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1598dcd589f8SShri Abhyankar PetscErrorCode ierr; 159967877ebaSShri Abhyankar Vec b; 160067877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1601397b6df1SKris Buschelman 1602397b6df1SKris Buschelman PetscFunctionBegin; 1603a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1604dcd589f8SShri Abhyankar 16059a2535b5SHong Zhang /* Set MUMPS options from the options database */ 16069a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1607dcd589f8SShri Abhyankar 1608a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 16093ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1610dcd589f8SShri Abhyankar 161167877ebaSShri Abhyankar /* analysis phase */ 161267877ebaSShri Abhyankar /*----------------*/ 1613a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1614a5e57a09SHong Zhang mumps->id.n = M; 1615a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 161667877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1617a5e57a09SHong Zhang if (!mumps->myid) { 1618a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1619a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1620940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 162167877ebaSShri Abhyankar } 162267877ebaSShri Abhyankar } 162367877ebaSShri Abhyankar break; 162467877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1625a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1626a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1627a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1628940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 162967877ebaSShri Abhyankar } 163067877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 16312a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 163294b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 16336bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 163467877ebaSShri Abhyankar break; 163567877ebaSShri Abhyankar } 16363ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 16375cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 16385cd7cf9dSHong Zhang 16392792810eSHong Zhang F->ops->choleskyfactornumeric = MatFactorNumeric_MUMPS; 1640dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 164151d5961aSHong Zhang F->ops->solvetranspose = MatSolve_MUMPS; 16424e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 164323a5080aSHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 16444e34a73bSHong Zhang #if defined(PETSC_USE_COMPLEX) 16450298fd71SBarry Smith F->ops->getinertia = NULL; 16464e34a73bSHong Zhang #else 16474e34a73bSHong Zhang F->ops->getinertia = MatGetInertia_SBAIJMUMPS; 1648db4efbfdSBarry Smith #endif 1649b24902e0SBarry Smith PetscFunctionReturn(0); 1650b24902e0SBarry Smith } 1651b24902e0SBarry Smith 165264e6c443SBarry Smith PetscErrorCode MatView_MUMPS(Mat A,PetscViewer viewer) 165374ed9c26SBarry Smith { 1654f6c57405SHong Zhang PetscErrorCode ierr; 165564e6c443SBarry Smith PetscBool iascii; 165664e6c443SBarry Smith PetscViewerFormat format; 1657e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 1658f6c57405SHong Zhang 1659f6c57405SHong Zhang PetscFunctionBegin; 166064e6c443SBarry Smith /* check if matrix is mumps type */ 166164e6c443SBarry Smith if (A->ops->solve != MatSolve_MUMPS) PetscFunctionReturn(0); 166264e6c443SBarry Smith 1663251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 166464e6c443SBarry Smith if (iascii) { 166564e6c443SBarry Smith ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 166664e6c443SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO) { 166764e6c443SBarry Smith ierr = PetscViewerASCIIPrintf(viewer,"MUMPS run parameters:\n");CHKERRQ(ierr); 1668a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," SYM (matrix type): %d \n",mumps->id.sym);CHKERRQ(ierr); 1669a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," PAR (host participation): %d \n",mumps->id.par);CHKERRQ(ierr); 1670a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(1) (output for error): %d \n",mumps->id.ICNTL(1));CHKERRQ(ierr); 1671a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(2) (output of diagnostic msg): %d \n",mumps->id.ICNTL(2));CHKERRQ(ierr); 1672a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(3) (output for global info): %d \n",mumps->id.ICNTL(3));CHKERRQ(ierr); 1673a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(4) (level of printing): %d \n",mumps->id.ICNTL(4));CHKERRQ(ierr); 1674a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(5) (input mat struct): %d \n",mumps->id.ICNTL(5));CHKERRQ(ierr); 1675a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(6) (matrix prescaling): %d \n",mumps->id.ICNTL(6));CHKERRQ(ierr); 1676d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(7) (sequential matrix ordering):%d \n",mumps->id.ICNTL(7));CHKERRQ(ierr); 1677d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(8) (scaling strategy): %d \n",mumps->id.ICNTL(8));CHKERRQ(ierr); 1678a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(10) (max num of refinements): %d \n",mumps->id.ICNTL(10));CHKERRQ(ierr); 1679a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(11) (error analysis): %d \n",mumps->id.ICNTL(11));CHKERRQ(ierr); 1680a5e57a09SHong Zhang if (mumps->id.ICNTL(11)>0) { 1681a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(4) (inf norm of input mat): %g\n",mumps->id.RINFOG(4));CHKERRQ(ierr); 1682a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(5) (inf norm of solution): %g\n",mumps->id.RINFOG(5));CHKERRQ(ierr); 1683a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(6) (inf norm of residual): %g\n",mumps->id.RINFOG(6));CHKERRQ(ierr); 1684a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(7),RINFOG(8) (backward error est): %g, %g\n",mumps->id.RINFOG(7),mumps->id.RINFOG(8));CHKERRQ(ierr); 1685a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(9) (error estimate): %g \n",mumps->id.RINFOG(9));CHKERRQ(ierr); 1686a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(10),RINFOG(11)(condition numbers): %g, %g\n",mumps->id.RINFOG(10),mumps->id.RINFOG(11));CHKERRQ(ierr); 1687f6c57405SHong Zhang } 1688a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(12) (efficiency control): %d \n",mumps->id.ICNTL(12));CHKERRQ(ierr); 1689a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(13) (efficiency control): %d \n",mumps->id.ICNTL(13));CHKERRQ(ierr); 1690a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(14) (percentage of estimated workspace increase): %d \n",mumps->id.ICNTL(14));CHKERRQ(ierr); 1691f6c57405SHong Zhang /* ICNTL(15-17) not used */ 1692a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(18) (input mat struct): %d \n",mumps->id.ICNTL(18));CHKERRQ(ierr); 1693d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(19) (Schur complement info): %d \n",mumps->id.ICNTL(19));CHKERRQ(ierr); 1694a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(20) (rhs sparse pattern): %d \n",mumps->id.ICNTL(20));CHKERRQ(ierr); 1695ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," ICNTL(21) (solution struct): %d \n",mumps->id.ICNTL(21));CHKERRQ(ierr); 1696a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(22) (in-core/out-of-core facility): %d \n",mumps->id.ICNTL(22));CHKERRQ(ierr); 1697a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(23) (max size of memory can be allocated locally):%d \n",mumps->id.ICNTL(23));CHKERRQ(ierr); 1698c0165424SHong Zhang 1699a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(24) (detection of null pivot rows): %d \n",mumps->id.ICNTL(24));CHKERRQ(ierr); 1700a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(25) (computation of a null space basis): %d \n",mumps->id.ICNTL(25));CHKERRQ(ierr); 1701a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(26) (Schur options for rhs or solution): %d \n",mumps->id.ICNTL(26));CHKERRQ(ierr); 1702a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(27) (experimental parameter): %d \n",mumps->id.ICNTL(27));CHKERRQ(ierr); 1703a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(28) (use parallel or sequential ordering): %d \n",mumps->id.ICNTL(28));CHKERRQ(ierr); 1704a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(29) (parallel ordering): %d \n",mumps->id.ICNTL(29));CHKERRQ(ierr); 170542179a6aSHong Zhang 1706a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(30) (user-specified set of entries in inv(A)): %d \n",mumps->id.ICNTL(30));CHKERRQ(ierr); 1707a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(31) (factors is discarded in the solve phase): %d \n",mumps->id.ICNTL(31));CHKERRQ(ierr); 1708a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(33) (compute determinant): %d \n",mumps->id.ICNTL(33));CHKERRQ(ierr); 17096e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(35) (activate BLR based factorization): %d \n",mumps->id.ICNTL(35));CHKERRQ(ierr); 1710a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(36) (choice of BLR factorization variant): %d \n",mumps->id.ICNTL(36));CHKERRQ(ierr); 1711a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(38) (estimated compression rate of LU factors): %d \n",mumps->id.ICNTL(38));CHKERRQ(ierr); 1712f6c57405SHong Zhang 1713a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(1) (relative pivoting threshold): %g \n",mumps->id.CNTL(1));CHKERRQ(ierr); 1714a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(2) (stopping criterion of refinement): %g \n",mumps->id.CNTL(2));CHKERRQ(ierr); 1715ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(3) (absolute pivoting threshold): %g \n",mumps->id.CNTL(3));CHKERRQ(ierr); 1716ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(4) (value of static pivoting): %g \n",mumps->id.CNTL(4));CHKERRQ(ierr); 1717a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(5) (fixation for null pivots): %g \n",mumps->id.CNTL(5));CHKERRQ(ierr); 17186e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(7) (dropping parameter for BLR): %g \n",mumps->id.CNTL(7));CHKERRQ(ierr); 1719f6c57405SHong Zhang 1720f6c57405SHong Zhang /* infomation local to each processor */ 172134ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(1) (local estimated flops for the elimination after analysis): \n");CHKERRQ(ierr); 17221575c14dSBarry Smith ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr); 1723a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(1));CHKERRQ(ierr); 17242a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 172534ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(2) (local estimated flops for the assembly after factorization): \n");CHKERRQ(ierr); 1726a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(2));CHKERRQ(ierr); 17272a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 172834ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(3) (local estimated flops for the elimination after factorization): \n");CHKERRQ(ierr); 1729a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(3));CHKERRQ(ierr); 17302a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1731f6c57405SHong Zhang 173234ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(15) (estimated size of (in MB) MUMPS internal data for running numerical factorization): \n");CHKERRQ(ierr); 1733a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(15));CHKERRQ(ierr); 17342a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1735f6c57405SHong Zhang 173634ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(16) (size of (in MB) MUMPS internal data used during numerical factorization): \n");CHKERRQ(ierr); 1737a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(16));CHKERRQ(ierr); 17382a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1739f6c57405SHong Zhang 174034ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(23) (num of pivots eliminated on this processor after factorization): \n");CHKERRQ(ierr); 1741a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(23));CHKERRQ(ierr); 17422a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1743b34f08ffSHong Zhang 1744a0e18203SThibaut Appel if (mumps->ninfo && mumps->ninfo <= 80){ 1745b34f08ffSHong Zhang PetscInt i; 1746b34f08ffSHong Zhang for (i=0; i<mumps->ninfo; i++){ 1747b34f08ffSHong Zhang ierr = PetscViewerASCIIPrintf(viewer, " INFO(%d): \n",mumps->info[i]);CHKERRQ(ierr); 1748b34f08ffSHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(mumps->info[i]));CHKERRQ(ierr); 17492a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1750b34f08ffSHong Zhang } 1751b34f08ffSHong Zhang } 17521575c14dSBarry Smith ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr); 1753f6c57405SHong Zhang 1754a5e57a09SHong Zhang if (!mumps->myid) { /* information from the host */ 1755a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(1) (global estimated flops for the elimination after analysis): %g \n",mumps->id.RINFOG(1));CHKERRQ(ierr); 1756a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(2) (global estimated flops for the assembly after factorization): %g \n",mumps->id.RINFOG(2));CHKERRQ(ierr); 1757a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(3) (global estimated flops for the elimination after factorization): %g \n",mumps->id.RINFOG(3));CHKERRQ(ierr); 1758a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," (RINFOG(12) RINFOG(13))*2^INFOG(34) (determinant): (%g,%g)*(2^%d)\n",mumps->id.RINFOG(12),mumps->id.RINFOG(13),mumps->id.INFOG(34));CHKERRQ(ierr); 1759f6c57405SHong Zhang 1760a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(3) (estimated real workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(3));CHKERRQ(ierr); 1761a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(4) (estimated integer workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(4));CHKERRQ(ierr); 1762a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(5) (estimated maximum front size in the complete tree): %d \n",mumps->id.INFOG(5));CHKERRQ(ierr); 1763a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(6) (number of nodes in the complete tree): %d \n",mumps->id.INFOG(6));CHKERRQ(ierr); 1764a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(7) (ordering option effectively use after analysis): %d \n",mumps->id.INFOG(7));CHKERRQ(ierr); 1765a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(8) (structural symmetry in percent of the permuted matrix after analysis): %d \n",mumps->id.INFOG(8));CHKERRQ(ierr); 1766a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(9) (total real/complex workspace to store the matrix factors after factorization): %d \n",mumps->id.INFOG(9));CHKERRQ(ierr); 1767a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(10) (total integer space store the matrix factors after factorization): %d \n",mumps->id.INFOG(10));CHKERRQ(ierr); 1768a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(11) (order of largest frontal matrix after factorization): %d \n",mumps->id.INFOG(11));CHKERRQ(ierr); 1769a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(12) (number of off-diagonal pivots): %d \n",mumps->id.INFOG(12));CHKERRQ(ierr); 1770a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(13) (number of delayed pivots after factorization): %d \n",mumps->id.INFOG(13));CHKERRQ(ierr); 1771a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(14) (number of memory compress after factorization): %d \n",mumps->id.INFOG(14));CHKERRQ(ierr); 1772a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(15) (number of steps of iterative refinement after solution): %d \n",mumps->id.INFOG(15));CHKERRQ(ierr); 1773a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(16) (estimated size (in MB) of all MUMPS internal data for factorization after analysis: value on the most memory consuming processor): %d \n",mumps->id.INFOG(16));CHKERRQ(ierr); 1774a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(17) (estimated size of all MUMPS internal data for factorization after analysis: sum over all processors): %d \n",mumps->id.INFOG(17));CHKERRQ(ierr); 1775a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(18) (size of all MUMPS internal data allocated during factorization: value on the most memory consuming processor): %d \n",mumps->id.INFOG(18));CHKERRQ(ierr); 1776a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(19) (size of all MUMPS internal data allocated during factorization: sum over all processors): %d \n",mumps->id.INFOG(19));CHKERRQ(ierr); 1777a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(20) (estimated number of entries in the factors): %d \n",mumps->id.INFOG(20));CHKERRQ(ierr); 1778a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(21) (size in MB of memory effectively used during factorization - value on the most memory consuming processor): %d \n",mumps->id.INFOG(21));CHKERRQ(ierr); 1779a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(22) (size in MB of memory effectively used during factorization - sum over all processors): %d \n",mumps->id.INFOG(22));CHKERRQ(ierr); 1780a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(23) (after analysis: value of ICNTL(6) effectively used): %d \n",mumps->id.INFOG(23));CHKERRQ(ierr); 1781a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(24) (after analysis: value of ICNTL(12) effectively used): %d \n",mumps->id.INFOG(24));CHKERRQ(ierr); 1782a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(25) (after factorization: number of pivots modified by static pivoting): %d \n",mumps->id.INFOG(25));CHKERRQ(ierr); 178340d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(28) (after factorization: number of null pivots encountered): %d\n",mumps->id.INFOG(28));CHKERRQ(ierr); 178440d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(29) (after factorization: effective number of entries in the factors (sum over all processors)): %d\n",mumps->id.INFOG(29));CHKERRQ(ierr); 178540d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(30, 31) (after solution: size in Mbytes of memory used during solution phase): %d, %d\n",mumps->id.INFOG(30),mumps->id.INFOG(31));CHKERRQ(ierr); 178640d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(32) (after analysis: type of analysis done): %d\n",mumps->id.INFOG(32));CHKERRQ(ierr); 178740d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(33) (value used for ICNTL(8)): %d\n",mumps->id.INFOG(33));CHKERRQ(ierr); 178840d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(34) (exponent of the determinant if determinant is requested): %d\n",mumps->id.INFOG(34));CHKERRQ(ierr); 1789a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(35) (after factorization: number of entries taking into account BLR factor compression - sum over all processors): %d\n",mumps->id.INFOG(35));CHKERRQ(ierr); 1790a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(36) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(36));CHKERRQ(ierr); 1791a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(37) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - sum over all processors): %d \n",mumps->id.INFOG(37));CHKERRQ(ierr); 1792a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(38) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(38));CHKERRQ(ierr); 1793a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(39) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - sum over all processors): %d \n",mumps->id.INFOG(39));CHKERRQ(ierr); 1794f6c57405SHong Zhang } 1795f6c57405SHong Zhang } 1796cb828f0fSHong Zhang } 1797f6c57405SHong Zhang PetscFunctionReturn(0); 1798f6c57405SHong Zhang } 1799f6c57405SHong Zhang 180035bd34faSBarry Smith PetscErrorCode MatGetInfo_MUMPS(Mat A,MatInfoType flag,MatInfo *info) 180135bd34faSBarry Smith { 1802e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)A->data; 180335bd34faSBarry Smith 180435bd34faSBarry Smith PetscFunctionBegin; 180535bd34faSBarry Smith info->block_size = 1.0; 1806cb828f0fSHong Zhang info->nz_allocated = mumps->id.INFOG(20); 1807cb828f0fSHong Zhang info->nz_used = mumps->id.INFOG(20); 180835bd34faSBarry Smith info->nz_unneeded = 0.0; 180935bd34faSBarry Smith info->assemblies = 0.0; 181035bd34faSBarry Smith info->mallocs = 0.0; 181135bd34faSBarry Smith info->memory = 0.0; 181235bd34faSBarry Smith info->fill_ratio_given = 0; 181335bd34faSBarry Smith info->fill_ratio_needed = 0; 181435bd34faSBarry Smith info->factor_mallocs = 0; 181535bd34faSBarry Smith PetscFunctionReturn(0); 181635bd34faSBarry Smith } 181735bd34faSBarry Smith 18185ccb76cbSHong Zhang /* -------------------------------------------------------------------------------------------*/ 18198e7ba810SStefano Zampini PetscErrorCode MatFactorSetSchurIS_MUMPS(Mat F, IS is) 18206444a565SStefano Zampini { 1821e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 18228e7ba810SStefano Zampini const PetscInt *idxs; 18238e7ba810SStefano Zampini PetscInt size,i; 18246444a565SStefano Zampini PetscErrorCode ierr; 18256444a565SStefano Zampini 18266444a565SStefano Zampini PetscFunctionBegin; 1827b3cb21ddSStefano Zampini ierr = ISGetLocalSize(is,&size);CHKERRQ(ierr); 18282d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 18293ab56b82SJunchao Zhang PetscBool ls,gs; /* gs is false if any rank other than root has non-empty IS */ 1830241dbb5eSStefano Zampini 18313ab56b82SJunchao Zhang ls = mumps->myid ? (size ? PETSC_FALSE : PETSC_TRUE) : PETSC_TRUE; /* always true on root; false on others if their size != 0 */ 18323ab56b82SJunchao Zhang ierr = MPI_Allreduce(&ls,&gs,1,MPIU_BOOL,MPI_LAND,mumps->petsc_comm);CHKERRQ(ierr); 1833241dbb5eSStefano Zampini if (!gs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MUMPS distributed parallel Schur complements not yet supported from PETSc\n"); 1834241dbb5eSStefano Zampini } 18356444a565SStefano Zampini if (mumps->id.size_schur != size) { 18366444a565SStefano Zampini ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr); 18376444a565SStefano Zampini mumps->id.size_schur = size; 18386444a565SStefano Zampini mumps->id.schur_lld = size; 18396444a565SStefano Zampini ierr = PetscMalloc2(size,&mumps->id.listvar_schur,size*size,&mumps->id.schur);CHKERRQ(ierr); 18406444a565SStefano Zampini } 1841b3cb21ddSStefano Zampini 1842b3cb21ddSStefano Zampini /* Schur complement matrix */ 1843b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.size_schur,(PetscScalar*)mumps->id.schur,&F->schur);CHKERRQ(ierr); 1844b3cb21ddSStefano Zampini if (mumps->sym == 1) { 1845b3cb21ddSStefano Zampini ierr = MatSetOption(F->schur,MAT_SPD,PETSC_TRUE);CHKERRQ(ierr); 1846b3cb21ddSStefano Zampini } 1847b3cb21ddSStefano Zampini 1848b3cb21ddSStefano Zampini /* MUMPS expects Fortran style indices */ 18498e7ba810SStefano Zampini ierr = ISGetIndices(is,&idxs);CHKERRQ(ierr); 1850580bdb30SBarry Smith ierr = PetscArraycpy(mumps->id.listvar_schur,idxs,size);CHKERRQ(ierr); 18518e7ba810SStefano Zampini for (i=0;i<size;i++) mumps->id.listvar_schur[i]++; 18528e7ba810SStefano Zampini ierr = ISRestoreIndices(is,&idxs);CHKERRQ(ierr); 18532d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 1854241dbb5eSStefano Zampini mumps->id.ICNTL(19) = 1; /* MUMPS returns Schur centralized on the host */ 1855241dbb5eSStefano Zampini } else { 18566444a565SStefano Zampini if (F->factortype == MAT_FACTOR_LU) { 185759ac8732SStefano Zampini mumps->id.ICNTL(19) = 3; /* MUMPS returns full matrix */ 18586444a565SStefano Zampini } else { 185959ac8732SStefano Zampini mumps->id.ICNTL(19) = 2; /* MUMPS returns lower triangular part */ 18606444a565SStefano Zampini } 1861241dbb5eSStefano Zampini } 186259ac8732SStefano Zampini /* set a special value of ICNTL (not handled my MUMPS) to be used in the solve phase by PETSc */ 1863b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 18646444a565SStefano Zampini PetscFunctionReturn(0); 18656444a565SStefano Zampini } 186659ac8732SStefano Zampini 18676444a565SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 18685a05ddb0SStefano Zampini PetscErrorCode MatFactorCreateSchurComplement_MUMPS(Mat F,Mat* S) 18696444a565SStefano Zampini { 18706444a565SStefano Zampini Mat St; 1871e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 18726444a565SStefano Zampini PetscScalar *array; 18736444a565SStefano Zampini #if defined(PETSC_USE_COMPLEX) 18748ac429a0SStefano Zampini PetscScalar im = PetscSqrtScalar((PetscScalar)-1.0); 18756444a565SStefano Zampini #endif 18766444a565SStefano Zampini PetscErrorCode ierr; 18776444a565SStefano Zampini 18786444a565SStefano Zampini PetscFunctionBegin; 18795a05ddb0SStefano Zampini if (!mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it"); 1880241dbb5eSStefano Zampini ierr = MatCreate(PETSC_COMM_SELF,&St);CHKERRQ(ierr); 18816444a565SStefano Zampini ierr = MatSetSizes(St,PETSC_DECIDE,PETSC_DECIDE,mumps->id.size_schur,mumps->id.size_schur);CHKERRQ(ierr); 18826444a565SStefano Zampini ierr = MatSetType(St,MATDENSE);CHKERRQ(ierr); 18836444a565SStefano Zampini ierr = MatSetUp(St);CHKERRQ(ierr); 18846444a565SStefano Zampini ierr = MatDenseGetArray(St,&array);CHKERRQ(ierr); 188559ac8732SStefano Zampini if (!mumps->sym) { /* MUMPS always return a full matrix */ 18866444a565SStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 18876444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 18886444a565SStefano Zampini for (i=0;i<N;i++) { 18896444a565SStefano Zampini for (j=0;j<N;j++) { 18906444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 18916444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 18926444a565SStefano Zampini #else 18936444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 18946444a565SStefano Zampini #endif 18956444a565SStefano Zampini array[j*N+i] = val; 18966444a565SStefano Zampini } 18976444a565SStefano Zampini } 18986444a565SStefano Zampini } else { /* stored by columns */ 1899580bdb30SBarry Smith ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr); 19006444a565SStefano Zampini } 19016444a565SStefano Zampini } else { /* either full or lower-triangular (not packed) */ 19026444a565SStefano Zampini if (mumps->id.ICNTL(19) == 2) { /* lower triangular stored by columns */ 19036444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19046444a565SStefano Zampini for (i=0;i<N;i++) { 19056444a565SStefano Zampini for (j=i;j<N;j++) { 19066444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19076444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19086444a565SStefano Zampini #else 19096444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19106444a565SStefano Zampini #endif 19116444a565SStefano Zampini array[i*N+j] = val; 19126444a565SStefano Zampini array[j*N+i] = val; 19136444a565SStefano Zampini } 19146444a565SStefano Zampini } 19156444a565SStefano Zampini } else if (mumps->id.ICNTL(19) == 3) { /* full matrix */ 1916580bdb30SBarry Smith ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr); 19176444a565SStefano Zampini } else { /* ICNTL(19) == 1 lower triangular stored by rows */ 19186444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19196444a565SStefano Zampini for (i=0;i<N;i++) { 19206444a565SStefano Zampini for (j=0;j<i+1;j++) { 19216444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19226444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19236444a565SStefano Zampini #else 19246444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19256444a565SStefano Zampini #endif 19266444a565SStefano Zampini array[i*N+j] = val; 19276444a565SStefano Zampini array[j*N+i] = val; 19286444a565SStefano Zampini } 19296444a565SStefano Zampini } 19306444a565SStefano Zampini } 19316444a565SStefano Zampini } 19326444a565SStefano Zampini ierr = MatDenseRestoreArray(St,&array);CHKERRQ(ierr); 19336444a565SStefano Zampini *S = St; 19346444a565SStefano Zampini PetscFunctionReturn(0); 19356444a565SStefano Zampini } 19366444a565SStefano Zampini 193759ac8732SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 19385ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt ival) 19395ccb76cbSHong Zhang { 1940e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 19415ccb76cbSHong Zhang 19425ccb76cbSHong Zhang PetscFunctionBegin; 1943a5e57a09SHong Zhang mumps->id.ICNTL(icntl) = ival; 19445ccb76cbSHong Zhang PetscFunctionReturn(0); 19455ccb76cbSHong Zhang } 19465ccb76cbSHong Zhang 1947bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt *ival) 1948bc6112feSHong Zhang { 1949e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1950bc6112feSHong Zhang 1951bc6112feSHong Zhang PetscFunctionBegin; 1952bc6112feSHong Zhang *ival = mumps->id.ICNTL(icntl); 1953bc6112feSHong Zhang PetscFunctionReturn(0); 1954bc6112feSHong Zhang } 1955bc6112feSHong Zhang 19565ccb76cbSHong Zhang /*@ 19575ccb76cbSHong Zhang MatMumpsSetIcntl - Set MUMPS parameter ICNTL() 19585ccb76cbSHong Zhang 19595ccb76cbSHong Zhang Logically Collective on Mat 19605ccb76cbSHong Zhang 19615ccb76cbSHong Zhang Input Parameters: 19625ccb76cbSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 19635ccb76cbSHong Zhang . icntl - index of MUMPS parameter array ICNTL() 19645ccb76cbSHong Zhang - ival - value of MUMPS ICNTL(icntl) 19655ccb76cbSHong Zhang 19665ccb76cbSHong Zhang Options Database: 19675ccb76cbSHong Zhang . -mat_mumps_icntl_<icntl> <ival> 19685ccb76cbSHong Zhang 19695ccb76cbSHong Zhang Level: beginner 19705ccb76cbSHong Zhang 197196a0c994SBarry Smith References: 197296a0c994SBarry Smith . MUMPS Users' Guide 19735ccb76cbSHong Zhang 19749fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 19755ccb76cbSHong Zhang @*/ 19765ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl(Mat F,PetscInt icntl,PetscInt ival) 19775ccb76cbSHong Zhang { 19785ccb76cbSHong Zhang PetscErrorCode ierr; 19795ccb76cbSHong Zhang 19805ccb76cbSHong Zhang PetscFunctionBegin; 19812989dfd4SHong Zhang PetscValidType(F,1); 19822989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 19835ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 19845ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,ival,3); 19855ccb76cbSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetIcntl_C",(Mat,PetscInt,PetscInt),(F,icntl,ival));CHKERRQ(ierr); 19865ccb76cbSHong Zhang PetscFunctionReturn(0); 19875ccb76cbSHong Zhang } 19885ccb76cbSHong Zhang 1989a21f80fcSHong Zhang /*@ 1990a21f80fcSHong Zhang MatMumpsGetIcntl - Get MUMPS parameter ICNTL() 1991a21f80fcSHong Zhang 1992a21f80fcSHong Zhang Logically Collective on Mat 1993a21f80fcSHong Zhang 1994a21f80fcSHong Zhang Input Parameters: 1995a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 1996a21f80fcSHong Zhang - icntl - index of MUMPS parameter array ICNTL() 1997a21f80fcSHong Zhang 1998a21f80fcSHong Zhang Output Parameter: 1999a21f80fcSHong Zhang . ival - value of MUMPS ICNTL(icntl) 2000a21f80fcSHong Zhang 2001a21f80fcSHong Zhang Level: beginner 2002a21f80fcSHong Zhang 200396a0c994SBarry Smith References: 200496a0c994SBarry Smith . MUMPS Users' Guide 2005a21f80fcSHong Zhang 20069fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2007a21f80fcSHong Zhang @*/ 2008bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl(Mat F,PetscInt icntl,PetscInt *ival) 2009bc6112feSHong Zhang { 2010bc6112feSHong Zhang PetscErrorCode ierr; 2011bc6112feSHong Zhang 2012bc6112feSHong Zhang PetscFunctionBegin; 20132989dfd4SHong Zhang PetscValidType(F,1); 20142989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2015bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2016bc6112feSHong Zhang PetscValidIntPointer(ival,3); 20172989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetIcntl_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2018bc6112feSHong Zhang PetscFunctionReturn(0); 2019bc6112feSHong Zhang } 2020bc6112feSHong Zhang 20218928b65cSHong Zhang /* -------------------------------------------------------------------------------------------*/ 20228928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal val) 20238928b65cSHong Zhang { 2024e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 20258928b65cSHong Zhang 20268928b65cSHong Zhang PetscFunctionBegin; 20278928b65cSHong Zhang mumps->id.CNTL(icntl) = val; 20288928b65cSHong Zhang PetscFunctionReturn(0); 20298928b65cSHong Zhang } 20308928b65cSHong Zhang 2031bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal *val) 2032bc6112feSHong Zhang { 2033e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2034bc6112feSHong Zhang 2035bc6112feSHong Zhang PetscFunctionBegin; 2036bc6112feSHong Zhang *val = mumps->id.CNTL(icntl); 2037bc6112feSHong Zhang PetscFunctionReturn(0); 2038bc6112feSHong Zhang } 2039bc6112feSHong Zhang 20408928b65cSHong Zhang /*@ 20418928b65cSHong Zhang MatMumpsSetCntl - Set MUMPS parameter CNTL() 20428928b65cSHong Zhang 20438928b65cSHong Zhang Logically Collective on Mat 20448928b65cSHong Zhang 20458928b65cSHong Zhang Input Parameters: 20468928b65cSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 20478928b65cSHong Zhang . icntl - index of MUMPS parameter array CNTL() 20488928b65cSHong Zhang - val - value of MUMPS CNTL(icntl) 20498928b65cSHong Zhang 20508928b65cSHong Zhang Options Database: 20518928b65cSHong Zhang . -mat_mumps_cntl_<icntl> <val> 20528928b65cSHong Zhang 20538928b65cSHong Zhang Level: beginner 20548928b65cSHong Zhang 205596a0c994SBarry Smith References: 205696a0c994SBarry Smith . MUMPS Users' Guide 20578928b65cSHong Zhang 20589fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 20598928b65cSHong Zhang @*/ 20608928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl(Mat F,PetscInt icntl,PetscReal val) 20618928b65cSHong Zhang { 20628928b65cSHong Zhang PetscErrorCode ierr; 20638928b65cSHong Zhang 20648928b65cSHong Zhang PetscFunctionBegin; 20652989dfd4SHong Zhang PetscValidType(F,1); 20662989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 20678928b65cSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2068bc6112feSHong Zhang PetscValidLogicalCollectiveReal(F,val,3); 20698928b65cSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetCntl_C",(Mat,PetscInt,PetscReal),(F,icntl,val));CHKERRQ(ierr); 20708928b65cSHong Zhang PetscFunctionReturn(0); 20718928b65cSHong Zhang } 20728928b65cSHong Zhang 2073a21f80fcSHong Zhang /*@ 2074a21f80fcSHong Zhang MatMumpsGetCntl - Get MUMPS parameter CNTL() 2075a21f80fcSHong Zhang 2076a21f80fcSHong Zhang Logically Collective on Mat 2077a21f80fcSHong Zhang 2078a21f80fcSHong Zhang Input Parameters: 2079a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2080a21f80fcSHong Zhang - icntl - index of MUMPS parameter array CNTL() 2081a21f80fcSHong Zhang 2082a21f80fcSHong Zhang Output Parameter: 2083a21f80fcSHong Zhang . val - value of MUMPS CNTL(icntl) 2084a21f80fcSHong Zhang 2085a21f80fcSHong Zhang Level: beginner 2086a21f80fcSHong Zhang 208796a0c994SBarry Smith References: 208896a0c994SBarry Smith . MUMPS Users' Guide 2089a21f80fcSHong Zhang 20909fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2091a21f80fcSHong Zhang @*/ 2092bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl(Mat F,PetscInt icntl,PetscReal *val) 2093bc6112feSHong Zhang { 2094bc6112feSHong Zhang PetscErrorCode ierr; 2095bc6112feSHong Zhang 2096bc6112feSHong Zhang PetscFunctionBegin; 20972989dfd4SHong Zhang PetscValidType(F,1); 20982989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2099bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2100bc6112feSHong Zhang PetscValidRealPointer(val,3); 21012989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetCntl_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2102bc6112feSHong Zhang PetscFunctionReturn(0); 2103bc6112feSHong Zhang } 2104bc6112feSHong Zhang 2105ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo_MUMPS(Mat F,PetscInt icntl,PetscInt *info) 2106bc6112feSHong Zhang { 2107e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2108bc6112feSHong Zhang 2109bc6112feSHong Zhang PetscFunctionBegin; 2110bc6112feSHong Zhang *info = mumps->id.INFO(icntl); 2111bc6112feSHong Zhang PetscFunctionReturn(0); 2112bc6112feSHong Zhang } 2113bc6112feSHong Zhang 2114ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog_MUMPS(Mat F,PetscInt icntl,PetscInt *infog) 2115bc6112feSHong Zhang { 2116e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2117bc6112feSHong Zhang 2118bc6112feSHong Zhang PetscFunctionBegin; 2119bc6112feSHong Zhang *infog = mumps->id.INFOG(icntl); 2120bc6112feSHong Zhang PetscFunctionReturn(0); 2121bc6112feSHong Zhang } 2122bc6112feSHong Zhang 2123ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfo) 2124bc6112feSHong Zhang { 2125e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2126bc6112feSHong Zhang 2127bc6112feSHong Zhang PetscFunctionBegin; 2128bc6112feSHong Zhang *rinfo = mumps->id.RINFO(icntl); 2129bc6112feSHong Zhang PetscFunctionReturn(0); 2130bc6112feSHong Zhang } 2131bc6112feSHong Zhang 2132ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfog) 2133bc6112feSHong Zhang { 2134e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2135bc6112feSHong Zhang 2136bc6112feSHong Zhang PetscFunctionBegin; 2137bc6112feSHong Zhang *rinfog = mumps->id.RINFOG(icntl); 2138bc6112feSHong Zhang PetscFunctionReturn(0); 2139bc6112feSHong Zhang } 2140bc6112feSHong Zhang 214189a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse_MUMPS(Mat F,Mat spRHS) 2142bb599dfdSHong Zhang { 2143bb599dfdSHong Zhang PetscErrorCode ierr; 21440e6b8875SHong Zhang Mat Bt = NULL,Btseq = NULL; 21450e6b8875SHong Zhang PetscBool flg; 2146bb599dfdSHong Zhang Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2147bb599dfdSHong Zhang PetscScalar *aa; 2148bb599dfdSHong Zhang PetscInt spnr,*ia,*ja; 2149bb599dfdSHong Zhang 2150bb599dfdSHong Zhang PetscFunctionBegin; 2151e3f2db6aSHong Zhang PetscValidIntPointer(spRHS,2); 21520e6b8875SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)spRHS,MATTRANSPOSEMAT,&flg);CHKERRQ(ierr); 21530e6b8875SHong Zhang if (flg) { 2154bb599dfdSHong Zhang ierr = MatTransposeGetMat(spRHS,&Bt);CHKERRQ(ierr); 21550e6b8875SHong Zhang } else SETERRQ(PetscObjectComm((PetscObject)spRHS),PETSC_ERR_ARG_WRONG,"Matrix spRHS must be type MATTRANSPOSEMAT matrix"); 2156bb599dfdSHong Zhang 2157bb599dfdSHong Zhang ierr = MatMumpsSetIcntl(F,30,1);CHKERRQ(ierr); 2158bb599dfdSHong Zhang 21592d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 21600e6b8875SHong Zhang Mat_MPIAIJ *b = (Mat_MPIAIJ*)Bt->data; 21610e6b8875SHong Zhang Btseq = b->A; 21620e6b8875SHong Zhang } else { 21630e6b8875SHong Zhang Btseq = Bt; 21640e6b8875SHong Zhang } 21650e6b8875SHong Zhang 2166e3f2db6aSHong Zhang if (!mumps->myid) { 21670e6b8875SHong Zhang ierr = MatSeqAIJGetArray(Btseq,&aa);CHKERRQ(ierr); 21680e6b8875SHong Zhang ierr = MatGetRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 21690e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2170bb599dfdSHong Zhang 2171bb599dfdSHong Zhang mumps->id.irhs_ptr = ia; 2172bb599dfdSHong Zhang mumps->id.irhs_sparse = ja; 2173bb599dfdSHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 2174bb599dfdSHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 2175e3f2db6aSHong Zhang } else { 2176e3f2db6aSHong Zhang mumps->id.irhs_ptr = NULL; 2177e3f2db6aSHong Zhang mumps->id.irhs_sparse = NULL; 2178e3f2db6aSHong Zhang mumps->id.nz_rhs = 0; 2179e3f2db6aSHong Zhang mumps->id.rhs_sparse = NULL; 2180e3f2db6aSHong Zhang } 2181bb599dfdSHong Zhang mumps->id.ICNTL(20) = 1; /* rhs is sparse */ 2182e3f2db6aSHong Zhang mumps->id.ICNTL(21) = 0; /* solution is in assembled centralized format */ 2183bb599dfdSHong Zhang 2184bb599dfdSHong Zhang /* solve phase */ 2185bb599dfdSHong Zhang /*-------------*/ 2186bb599dfdSHong Zhang mumps->id.job = JOB_SOLVE; 21873ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 2188e3f2db6aSHong Zhang if (mumps->id.INFOG(1) < 0) 2189e3f2db6aSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 219014267174SHong Zhang 2191e3f2db6aSHong Zhang if (!mumps->myid) { 21920e6b8875SHong Zhang ierr = MatSeqAIJRestoreArray(Btseq,&aa);CHKERRQ(ierr); 21930e6b8875SHong Zhang ierr = MatRestoreRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 21940e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2195e3f2db6aSHong Zhang } 2196bb599dfdSHong Zhang PetscFunctionReturn(0); 2197bb599dfdSHong Zhang } 2198bb599dfdSHong Zhang 2199bb599dfdSHong Zhang /*@ 220089a9c03aSHong Zhang MatMumpsGetInverse - Get user-specified set of entries in inverse of A 2201bb599dfdSHong Zhang 2202bb599dfdSHong Zhang Logically Collective on Mat 2203bb599dfdSHong Zhang 2204bb599dfdSHong Zhang Input Parameters: 2205bb599dfdSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2206e3f2db6aSHong Zhang - spRHS - sequential sparse matrix in MATTRANSPOSEMAT format holding specified indices in processor[0] 2207bb599dfdSHong Zhang 2208bb599dfdSHong Zhang Output Parameter: 2209e3f2db6aSHong Zhang . spRHS - requested entries of inverse of A 2210bb599dfdSHong Zhang 2211bb599dfdSHong Zhang Level: beginner 2212bb599dfdSHong Zhang 2213bb599dfdSHong Zhang References: 2214bb599dfdSHong Zhang . MUMPS Users' Guide 2215bb599dfdSHong Zhang 2216bb599dfdSHong Zhang .seealso: MatGetFactor(), MatCreateTranspose() 2217bb599dfdSHong Zhang @*/ 221889a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse(Mat F,Mat spRHS) 2219bb599dfdSHong Zhang { 2220bb599dfdSHong Zhang PetscErrorCode ierr; 2221bb599dfdSHong Zhang 2222bb599dfdSHong Zhang PetscFunctionBegin; 2223bb599dfdSHong Zhang PetscValidType(F,1); 2224bb599dfdSHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 222589a9c03aSHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverse_C",(Mat,Mat),(F,spRHS));CHKERRQ(ierr); 2226bb599dfdSHong Zhang PetscFunctionReturn(0); 2227bb599dfdSHong Zhang } 2228bb599dfdSHong Zhang 22290e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose_MUMPS(Mat F,Mat spRHST) 22300e6b8875SHong Zhang { 22310e6b8875SHong Zhang PetscErrorCode ierr; 22320e6b8875SHong Zhang Mat spRHS; 22330e6b8875SHong Zhang 22340e6b8875SHong Zhang PetscFunctionBegin; 22350e6b8875SHong Zhang ierr = MatCreateTranspose(spRHST,&spRHS);CHKERRQ(ierr); 22360e6b8875SHong Zhang ierr = MatMumpsGetInverse_MUMPS(F,spRHS);CHKERRQ(ierr); 22370e6b8875SHong Zhang ierr = MatDestroy(&spRHS);CHKERRQ(ierr); 22380e6b8875SHong Zhang PetscFunctionReturn(0); 22390e6b8875SHong Zhang } 22400e6b8875SHong Zhang 22410e6b8875SHong Zhang /*@ 2242eef1237cSHong Zhang MatMumpsGetInverseTranspose - Get user-specified set of entries in inverse of matrix A^T 22430e6b8875SHong Zhang 22440e6b8875SHong Zhang Logically Collective on Mat 22450e6b8875SHong Zhang 22460e6b8875SHong Zhang Input Parameters: 22470e6b8875SHong Zhang + F - the factored matrix of A obtained by calling MatGetFactor() from PETSc-MUMPS interface 22480e6b8875SHong Zhang - spRHST - sequential sparse matrix in MATAIJ format holding specified indices of A^T in processor[0] 22490e6b8875SHong Zhang 22500e6b8875SHong Zhang Output Parameter: 22510e6b8875SHong Zhang . spRHST - requested entries of inverse of A^T 22520e6b8875SHong Zhang 22530e6b8875SHong Zhang Level: beginner 22540e6b8875SHong Zhang 22550e6b8875SHong Zhang References: 22560e6b8875SHong Zhang . MUMPS Users' Guide 22570e6b8875SHong Zhang 22580e6b8875SHong Zhang .seealso: MatGetFactor(), MatCreateTranspose(), MatMumpsGetInverse() 22590e6b8875SHong Zhang @*/ 22600e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose(Mat F,Mat spRHST) 22610e6b8875SHong Zhang { 22620e6b8875SHong Zhang PetscErrorCode ierr; 22630e6b8875SHong Zhang PetscBool flg; 22640e6b8875SHong Zhang 22650e6b8875SHong Zhang PetscFunctionBegin; 22660e6b8875SHong Zhang PetscValidType(F,1); 22670e6b8875SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 22680e6b8875SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)spRHST,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 22690e6b8875SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)spRHST),PETSC_ERR_ARG_WRONG,"Matrix spRHST must be MATAIJ matrix"); 22700e6b8875SHong Zhang 22710e6b8875SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverseTranspose_C",(Mat,Mat),(F,spRHST));CHKERRQ(ierr); 22720e6b8875SHong Zhang PetscFunctionReturn(0); 22730e6b8875SHong Zhang } 22740e6b8875SHong Zhang 2275a21f80fcSHong Zhang /*@ 2276a21f80fcSHong Zhang MatMumpsGetInfo - Get MUMPS parameter INFO() 2277a21f80fcSHong Zhang 2278a21f80fcSHong Zhang Logically Collective on Mat 2279a21f80fcSHong Zhang 2280a21f80fcSHong Zhang Input Parameters: 2281a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2282a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFO() 2283a21f80fcSHong Zhang 2284a21f80fcSHong Zhang Output Parameter: 2285a21f80fcSHong Zhang . ival - value of MUMPS INFO(icntl) 2286a21f80fcSHong Zhang 2287a21f80fcSHong Zhang Level: beginner 2288a21f80fcSHong Zhang 228996a0c994SBarry Smith References: 229096a0c994SBarry Smith . MUMPS Users' Guide 2291a21f80fcSHong Zhang 22929fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2293a21f80fcSHong Zhang @*/ 2294ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo(Mat F,PetscInt icntl,PetscInt *ival) 2295bc6112feSHong Zhang { 2296bc6112feSHong Zhang PetscErrorCode ierr; 2297bc6112feSHong Zhang 2298bc6112feSHong Zhang PetscFunctionBegin; 22992989dfd4SHong Zhang PetscValidType(F,1); 23002989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2301ca810319SHong Zhang PetscValidIntPointer(ival,3); 23022989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfo_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2303bc6112feSHong Zhang PetscFunctionReturn(0); 2304bc6112feSHong Zhang } 2305bc6112feSHong Zhang 2306a21f80fcSHong Zhang /*@ 2307a21f80fcSHong Zhang MatMumpsGetInfog - Get MUMPS parameter INFOG() 2308a21f80fcSHong Zhang 2309a21f80fcSHong Zhang Logically Collective on Mat 2310a21f80fcSHong Zhang 2311a21f80fcSHong Zhang Input Parameters: 2312a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2313a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFOG() 2314a21f80fcSHong Zhang 2315a21f80fcSHong Zhang Output Parameter: 2316a21f80fcSHong Zhang . ival - value of MUMPS INFOG(icntl) 2317a21f80fcSHong Zhang 2318a21f80fcSHong Zhang Level: beginner 2319a21f80fcSHong Zhang 232096a0c994SBarry Smith References: 232196a0c994SBarry Smith . MUMPS Users' Guide 2322a21f80fcSHong Zhang 23239fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2324a21f80fcSHong Zhang @*/ 2325ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog(Mat F,PetscInt icntl,PetscInt *ival) 2326bc6112feSHong Zhang { 2327bc6112feSHong Zhang PetscErrorCode ierr; 2328bc6112feSHong Zhang 2329bc6112feSHong Zhang PetscFunctionBegin; 23302989dfd4SHong Zhang PetscValidType(F,1); 23312989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2332ca810319SHong Zhang PetscValidIntPointer(ival,3); 23332989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfog_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2334bc6112feSHong Zhang PetscFunctionReturn(0); 2335bc6112feSHong Zhang } 2336bc6112feSHong Zhang 2337a21f80fcSHong Zhang /*@ 2338a21f80fcSHong Zhang MatMumpsGetRinfo - Get MUMPS parameter RINFO() 2339a21f80fcSHong Zhang 2340a21f80fcSHong Zhang Logically Collective on Mat 2341a21f80fcSHong Zhang 2342a21f80fcSHong Zhang Input Parameters: 2343a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2344a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFO() 2345a21f80fcSHong Zhang 2346a21f80fcSHong Zhang Output Parameter: 2347a21f80fcSHong Zhang . val - value of MUMPS RINFO(icntl) 2348a21f80fcSHong Zhang 2349a21f80fcSHong Zhang Level: beginner 2350a21f80fcSHong Zhang 235196a0c994SBarry Smith References: 235296a0c994SBarry Smith . MUMPS Users' Guide 2353a21f80fcSHong Zhang 23549fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2355a21f80fcSHong Zhang @*/ 2356ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo(Mat F,PetscInt icntl,PetscReal *val) 2357bc6112feSHong Zhang { 2358bc6112feSHong Zhang PetscErrorCode ierr; 2359bc6112feSHong Zhang 2360bc6112feSHong Zhang PetscFunctionBegin; 23612989dfd4SHong Zhang PetscValidType(F,1); 23622989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2363bc6112feSHong Zhang PetscValidRealPointer(val,3); 23642989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfo_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2365bc6112feSHong Zhang PetscFunctionReturn(0); 2366bc6112feSHong Zhang } 2367bc6112feSHong Zhang 2368a21f80fcSHong Zhang /*@ 2369a21f80fcSHong Zhang MatMumpsGetRinfog - Get MUMPS parameter RINFOG() 2370a21f80fcSHong Zhang 2371a21f80fcSHong Zhang Logically Collective on Mat 2372a21f80fcSHong Zhang 2373a21f80fcSHong Zhang Input Parameters: 2374a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2375a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFOG() 2376a21f80fcSHong Zhang 2377a21f80fcSHong Zhang Output Parameter: 2378a21f80fcSHong Zhang . val - value of MUMPS RINFOG(icntl) 2379a21f80fcSHong Zhang 2380a21f80fcSHong Zhang Level: beginner 2381a21f80fcSHong Zhang 238296a0c994SBarry Smith References: 238396a0c994SBarry Smith . MUMPS Users' Guide 2384a21f80fcSHong Zhang 23859fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2386a21f80fcSHong Zhang @*/ 2387ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog(Mat F,PetscInt icntl,PetscReal *val) 2388bc6112feSHong Zhang { 2389bc6112feSHong Zhang PetscErrorCode ierr; 2390bc6112feSHong Zhang 2391bc6112feSHong Zhang PetscFunctionBegin; 23922989dfd4SHong Zhang PetscValidType(F,1); 23932989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2394bc6112feSHong Zhang PetscValidRealPointer(val,3); 23952989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfog_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2396bc6112feSHong Zhang PetscFunctionReturn(0); 2397bc6112feSHong Zhang } 2398bc6112feSHong Zhang 239924b6179bSKris Buschelman /*MC 24002692d6eeSBarry Smith MATSOLVERMUMPS - A matrix type providing direct solvers (LU and Cholesky) for 240124b6179bSKris Buschelman distributed and sequential matrices via the external package MUMPS. 240224b6179bSKris Buschelman 240341c8de11SBarry Smith Works with MATAIJ and MATSBAIJ matrices 240424b6179bSKris Buschelman 2405c2b89b5dSBarry Smith Use ./configure --download-mumps --download-scalapack --download-parmetis --download-metis --download-ptscotch to have PETSc installed with MUMPS 2406c2b89b5dSBarry Smith 2407217d3b1eSJunchao Zhang Use ./configure --with-openmp --download-hwloc (or --with-hwloc) to enable running MUMPS in MPI+OpenMP hybrid mode and non-MUMPS in flat-MPI mode. See details below. 2408217d3b1eSJunchao Zhang 24093ca39a21SBarry Smith Use -pc_type cholesky or lu -pc_factor_mat_solver_type mumps to use this direct solver 2410c2b89b5dSBarry Smith 241124b6179bSKris Buschelman Options Database Keys: 24124422a9fcSPatrick Sanan + -mat_mumps_icntl_1 - ICNTL(1): output stream for error messages 24134422a9fcSPatrick Sanan . -mat_mumps_icntl_2 - ICNTL(2): output stream for diagnostic printing, statistics, and warning 24144422a9fcSPatrick Sanan . -mat_mumps_icntl_3 - ICNTL(3): output stream for global information, collected on the host 24154422a9fcSPatrick Sanan . -mat_mumps_icntl_4 - ICNTL(4): level of printing (0 to 4) 24164422a9fcSPatrick Sanan . -mat_mumps_icntl_6 - ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7) 24174422a9fcSPatrick Sanan . -mat_mumps_icntl_7 - ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis 24184422a9fcSPatrick Sanan . -mat_mumps_icntl_8 - ICNTL(8): scaling strategy (-2 to 8 or 77) 24194422a9fcSPatrick Sanan . -mat_mumps_icntl_10 - ICNTL(10): max num of refinements 24204422a9fcSPatrick Sanan . -mat_mumps_icntl_11 - ICNTL(11): statistics related to an error analysis (via -ksp_view) 24214422a9fcSPatrick Sanan . -mat_mumps_icntl_12 - ICNTL(12): an ordering strategy for symmetric matrices (0 to 3) 24224422a9fcSPatrick Sanan . -mat_mumps_icntl_13 - ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting 24234422a9fcSPatrick Sanan . -mat_mumps_icntl_14 - ICNTL(14): percentage increase in the estimated working space 24244422a9fcSPatrick Sanan . -mat_mumps_icntl_19 - ICNTL(19): computes the Schur complement 24254422a9fcSPatrick Sanan . -mat_mumps_icntl_22 - ICNTL(22): in-core/out-of-core factorization and solve (0 or 1) 24264422a9fcSPatrick Sanan . -mat_mumps_icntl_23 - ICNTL(23): max size of the working memory (MB) that can allocate per processor 24274422a9fcSPatrick Sanan . -mat_mumps_icntl_24 - ICNTL(24): detection of null pivot rows (0 or 1) 24284422a9fcSPatrick Sanan . -mat_mumps_icntl_25 - ICNTL(25): compute a solution of a deficient matrix and a null space basis 24294422a9fcSPatrick Sanan . -mat_mumps_icntl_26 - ICNTL(26): drives the solution phase if a Schur complement matrix 24304422a9fcSPatrick Sanan . -mat_mumps_icntl_28 - ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering 24314422a9fcSPatrick Sanan . -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis 24324422a9fcSPatrick Sanan . -mat_mumps_icntl_30 - ICNTL(30): compute user-specified set of entries in inv(A) 24334422a9fcSPatrick Sanan . -mat_mumps_icntl_31 - ICNTL(31): indicates which factors may be discarded during factorization 24344422a9fcSPatrick Sanan . -mat_mumps_icntl_33 - ICNTL(33): compute determinant 2435a0e18203SThibaut Appel . -mat_mumps_icntl_35 - ICNTL(35): level of activation of BLR (Block Low-Rank) feature 2436a0e18203SThibaut Appel . -mat_mumps_icntl_36 - ICNTL(36): controls the choice of BLR factorization variant 2437a0e18203SThibaut Appel . -mat_mumps_icntl_38 - ICNTL(38): sets the estimated compression rate of LU factors with BLR 24384422a9fcSPatrick Sanan . -mat_mumps_cntl_1 - CNTL(1): relative pivoting threshold 24394422a9fcSPatrick Sanan . -mat_mumps_cntl_2 - CNTL(2): stopping criterion of refinement 24404422a9fcSPatrick Sanan . -mat_mumps_cntl_3 - CNTL(3): absolute pivoting threshold 24414422a9fcSPatrick Sanan . -mat_mumps_cntl_4 - CNTL(4): value for static pivoting 2442217d3b1eSJunchao Zhang . -mat_mumps_cntl_5 - CNTL(5): fixation for null pivots 2443a0e18203SThibaut Appel . -mat_mumps_cntl_7 - CNTL(7): precision of the dropping parameter used during BLR factorization 2444217d3b1eSJunchao Zhang - -mat_mumps_use_omp_threads [m] - run MUMPS in MPI+OpenMP hybrid mode as if omp_set_num_threads(m) is called before calling MUMPS. 2445217d3b1eSJunchao Zhang Default might be the number of cores per CPU package (socket) as reported by hwloc and suggested by the MUMPS manual. 244624b6179bSKris Buschelman 244724b6179bSKris Buschelman Level: beginner 244824b6179bSKris Buschelman 244995452b02SPatrick Sanan Notes: 2450c0decd05SBarry Smith When a MUMPS factorization fails inside a KSP solve, for example with a KSP_DIVERGED_PC_FAILED, one can find the MUMPS information about the failure by calling 24519fc87aa7SBarry Smith $ KSPGetPC(ksp,&pc); 24529fc87aa7SBarry Smith $ PCFactorGetMatrix(pc,&mat); 24539fc87aa7SBarry Smith $ MatMumpsGetInfo(mat,....); 24549fc87aa7SBarry Smith $ MatMumpsGetInfog(mat,....); etc. 24559fc87aa7SBarry Smith Or you can run with -ksp_error_if_not_converged and the program will be stopped and the information printed in the error message. 24569fc87aa7SBarry Smith 2457217d3b1eSJunchao Zhang If you want to run MUMPS in MPI+OpenMP hybrid mode (i.e., enable multithreading in MUMPS), but still want to run the non-MUMPS part 2458217d3b1eSJunchao Zhang (i.e., PETSc part) of your code in the so-called flat-MPI (aka pure-MPI) mode, you need to configure PETSc with --with-openmp --download-hwloc 2459217d3b1eSJunchao Zhang (or --with-hwloc), and have an MPI that supports MPI-3.0's process shared memory (which is usually available). Since MUMPS calls BLAS 2460217d3b1eSJunchao Zhang libraries, to really get performance, you should have multithreaded BLAS libraries such as Intel MKL, AMD ACML, Cray libSci or open sourced 2461217d3b1eSJunchao Zhang OpenBLAS (PETSc has configure options to install/specify them). With these conditions met, you can run your program as before but with 2462217d3b1eSJunchao Zhang an extra option -mat_mumps_use_omp_threads [m]. It works as if we set OMP_NUM_THREADS=m to MUMPS, with m defaults to the number of cores 2463217d3b1eSJunchao Zhang per CPU socket (or package, in hwloc term), or number of PETSc MPI processes on a node, whichever is smaller. 2464217d3b1eSJunchao Zhang 2465217d3b1eSJunchao Zhang By flat-MPI or pure-MPI mode, it means you run your code with as many MPI ranks as the number of cores. For example, 2466217d3b1eSJunchao Zhang if a compute node has 32 cores and you run on two nodes, you may use "mpirun -n 64 ./test". To run MPI+OpenMP hybrid MUMPS, 2467217d3b1eSJunchao Zhang the tranditional way is to set OMP_NUM_THREADS and run with fewer MPI ranks than cores. For example, if you want to have 16 OpenMP 2468217d3b1eSJunchao Zhang threads per rank, then you may use "export OMP_NUM_THREADS=16 && mpirun -n 4 ./test". The problem of this approach is that the non-MUMPS 2469217d3b1eSJunchao Zhang part of your code is run with fewer cores and CPUs are wasted. "-mat_mumps_use_omp_threads [m]" provides an alternative such that 2470217d3b1eSJunchao Zhang you can stil run your code with as many MPI ranks as the number of cores, but have MUMPS run in MPI+OpenMP hybrid mode. In our example, 2471217d3b1eSJunchao Zhang you can use "mpirun -n 64 ./test -mat_mumps_use_omp_threads 16". 2472217d3b1eSJunchao Zhang 2473217d3b1eSJunchao Zhang If you run your code through a job submission system, there are caveats in MPI rank mapping. We use MPI_Comm_split_type to get MPI 2474217d3b1eSJunchao Zhang processes on each compute node. Listing the processes in rank ascending order, we split processes on a node into consecutive groups of 2475217d3b1eSJunchao Zhang size m and create a communicator called omp_comm for each group. Rank 0 in an omp_comm is called the master rank, and others in the omp_comm 2476217d3b1eSJunchao Zhang are called slave ranks (or slaves). Only master ranks are seen to MUMPS and slaves are not. We will free CPUs assigned to slaves (might be set 2477217d3b1eSJunchao Zhang by CPU binding policies in job scripts) and make the CPUs available to the master so that OMP threads spawned by MUMPS can run on the CPUs. 2478217d3b1eSJunchao Zhang In a multi-socket compute node, MPI rank mapping is an issue. Still use the above example and suppose your compute node has two sockets, 2479217d3b1eSJunchao Zhang if you interleave MPI ranks on the two sockets, in other words, even ranks are placed on socket 0, and odd ranks are on socket 1, and bind 2480217d3b1eSJunchao Zhang MPI ranks to cores, then with -mat_mumps_use_omp_threads 16, a master rank (and threads it spawns) will use half cores in socket 0, and half 2481217d3b1eSJunchao Zhang cores in socket 1, that definitely hurts locality. On the other hand, if you map MPI ranks consecutively on the two sockets, then the 2482217d3b1eSJunchao Zhang problem will not happen. Therefore, when you use -mat_mumps_use_omp_threads, you need to keep an eye on your MPI rank mapping and CPU binding. 2483217d3b1eSJunchao Zhang For example, with the Slurm job scheduler, one can use srun --cpu-bind=verbsoe -m block:block to map consecutive MPI ranks to sockets and 2484217d3b1eSJunchao Zhang examine the mapping result. 2485217d3b1eSJunchao Zhang 2486217d3b1eSJunchao Zhang PETSc does not control thread binding in MUMPS. So to get best performance, one still has to set OMP_PROC_BIND and OMP_PLACES in job scripts, 2487217d3b1eSJunchao Zhang for example, export OMP_PLACES=threads and export OMP_PROC_BIND=spread. One does not need to export OMP_NUM_THREADS=m in job scripts as PETSc 2488217d3b1eSJunchao Zhang calls omp_set_num_threads(m) internally before calling MUMPS. 2489217d3b1eSJunchao Zhang 2490217d3b1eSJunchao Zhang References: 2491217d3b1eSJunchao Zhang + 1. - Heroux, Michael A., R. Brightwell, and Michael M. Wolf. "Bi-modal MPI and MPI+ threads computing on scalable multicore systems." IJHPCA (Submitted) (2011). 2492217d3b1eSJunchao Zhang - 2. - Gutierrez, Samuel K., et al. "Accommodating Thread-Level Heterogeneity in Coupled Parallel Applications." Parallel and Distributed Processing Symposium (IPDPS), 2017 IEEE International. IEEE, 2017. 2493217d3b1eSJunchao Zhang 24943ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog(), KSPGetPC(), PCGetFactor(), PCFactorGetMatrix() 249541c8de11SBarry Smith 249624b6179bSKris Buschelman M*/ 249724b6179bSKris Buschelman 2498ea799195SBarry Smith static PetscErrorCode MatFactorGetSolverType_mumps(Mat A,MatSolverType *type) 249935bd34faSBarry Smith { 250035bd34faSBarry Smith PetscFunctionBegin; 25012692d6eeSBarry Smith *type = MATSOLVERMUMPS; 250235bd34faSBarry Smith PetscFunctionReturn(0); 250335bd34faSBarry Smith } 250435bd34faSBarry Smith 2505bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI AIJ matrices */ 2506cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_aij_mumps(Mat A,MatFactorType ftype,Mat *F) 25072877fffaSHong Zhang { 25082877fffaSHong Zhang Mat B; 25092877fffaSHong Zhang PetscErrorCode ierr; 25102877fffaSHong Zhang Mat_MUMPS *mumps; 2511ace3abfcSBarry Smith PetscBool isSeqAIJ; 25122877fffaSHong Zhang 25132877fffaSHong Zhang PetscFunctionBegin; 25142877fffaSHong Zhang /* Create the factorization matrix */ 2515251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ);CHKERRQ(ierr); 2516ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 25172877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2518e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2519e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 25202877fffaSHong Zhang 2521b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 25222205254eSKarl Rupp 25232877fffaSHong Zhang B->ops->view = MatView_MUMPS; 252435bd34faSBarry Smith B->ops->getinfo = MatGetInfo_MUMPS; 25252205254eSKarl Rupp 25263ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 25275a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 25285a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2529bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2530bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2531bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2532bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2533ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2534ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2535ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2536ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 253789a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 25380e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 25396444a565SStefano Zampini 2540450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2541450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 2542d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 2543bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqaij; 2544bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpiaij; 2545746480a1SHong Zhang mumps->sym = 0; 2546dcd589f8SShri Abhyankar } else { 254767877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2548450b117fSShri Abhyankar B->factortype = MAT_FACTOR_CHOLESKY; 2549bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqsbaij; 2550bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpisbaij; 255159ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 255259ac8732SStefano Zampini mumps->sym = 2; 255359ac8732SStefano Zampini #else 25546fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 25556fdc2a6dSBarry Smith else mumps->sym = 2; 255659ac8732SStefano Zampini #endif 2557450b117fSShri Abhyankar } 25582877fffaSHong Zhang 255900c67f3bSHong Zhang /* set solvertype */ 256000c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 256100c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 256200c67f3bSHong Zhang 25632877fffaSHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2564e69c285eSBarry Smith B->data = (void*)mumps; 25652205254eSKarl Rupp 2566f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2567746480a1SHong Zhang 25682877fffaSHong Zhang *F = B; 25692877fffaSHong Zhang PetscFunctionReturn(0); 25702877fffaSHong Zhang } 25712877fffaSHong Zhang 2572bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI SBAIJ matrices */ 2573cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_sbaij_mumps(Mat A,MatFactorType ftype,Mat *F) 25742877fffaSHong Zhang { 25752877fffaSHong Zhang Mat B; 25762877fffaSHong Zhang PetscErrorCode ierr; 25772877fffaSHong Zhang Mat_MUMPS *mumps; 2578ace3abfcSBarry Smith PetscBool isSeqSBAIJ; 25792877fffaSHong Zhang 25802877fffaSHong Zhang PetscFunctionBegin; 2581ce94432eSBarry Smith if (ftype != MAT_FACTOR_CHOLESKY) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with MUMPS LU, use AIJ matrix"); 2582ce94432eSBarry Smith if (A->rmap->bs > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with block size > 1 with MUMPS Cholesky, use AIJ matrix instead"); 2583251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ);CHKERRQ(ierr); 25842877fffaSHong Zhang /* Create the factorization matrix */ 2585ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 25862877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2587e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2588e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2589e69c285eSBarry Smith 2590b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2591bccb9932SShri Abhyankar if (isSeqSBAIJ) { 259216ebf90aSShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_seqsbaij_seqsbaij; 2593dcd589f8SShri Abhyankar } else { 2594bccb9932SShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_mpisbaij_mpisbaij; 2595bccb9932SShri Abhyankar } 2596bccb9932SShri Abhyankar 2597e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 259867877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2599bccb9932SShri Abhyankar B->ops->view = MatView_MUMPS; 26002205254eSKarl Rupp 26013ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 26025a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 26035a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2604b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2605b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2606b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2607b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2608ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2609ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2610ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2611ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 261289a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2613eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 26142205254eSKarl Rupp 2615f4762488SHong Zhang B->factortype = MAT_FACTOR_CHOLESKY; 261659ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 261759ac8732SStefano Zampini mumps->sym = 2; 261859ac8732SStefano Zampini #else 26196fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 26206fdc2a6dSBarry Smith else mumps->sym = 2; 262159ac8732SStefano Zampini #endif 2622a214ac2aSShri Abhyankar 262300c67f3bSHong Zhang /* set solvertype */ 262400c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 262500c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 262600c67f3bSHong Zhang 2627f3c0ef26SHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2628e69c285eSBarry Smith B->data = (void*)mumps; 26292205254eSKarl Rupp 2630f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2631746480a1SHong Zhang 26322877fffaSHong Zhang *F = B; 26332877fffaSHong Zhang PetscFunctionReturn(0); 26342877fffaSHong Zhang } 263597969023SHong Zhang 2636cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_baij_mumps(Mat A,MatFactorType ftype,Mat *F) 263767877ebaSShri Abhyankar { 263867877ebaSShri Abhyankar Mat B; 263967877ebaSShri Abhyankar PetscErrorCode ierr; 264067877ebaSShri Abhyankar Mat_MUMPS *mumps; 2641ace3abfcSBarry Smith PetscBool isSeqBAIJ; 264267877ebaSShri Abhyankar 264367877ebaSShri Abhyankar PetscFunctionBegin; 264467877ebaSShri Abhyankar /* Create the factorization matrix */ 2645251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&isSeqBAIJ);CHKERRQ(ierr); 2646ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 264767877ebaSShri Abhyankar ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2648e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2649e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2650450b117fSShri Abhyankar 2651b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2652450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2653450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_BAIJMUMPS; 2654450b117fSShri Abhyankar B->factortype = MAT_FACTOR_LU; 2655bccb9932SShri Abhyankar if (isSeqBAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqbaij_seqaij; 2656bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpibaij_mpiaij; 2657746480a1SHong Zhang mumps->sym = 0; 2658f23aa3ddSBarry Smith } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc BAIJ matrices with MUMPS Cholesky, use SBAIJ or AIJ matrix instead\n"); 2659bccb9932SShri Abhyankar 2660e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 2661450b117fSShri Abhyankar B->ops->view = MatView_MUMPS; 26622205254eSKarl Rupp 26633ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 26645a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 26655a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2666bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2667bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2668bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2669bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2670ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2671ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2672ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2673ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 267489a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2675eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 2676450b117fSShri Abhyankar 267700c67f3bSHong Zhang /* set solvertype */ 267800c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 267900c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 268000c67f3bSHong Zhang 26817ee00b23SStefano Zampini B->ops->destroy = MatDestroy_MUMPS; 26827ee00b23SStefano Zampini B->data = (void*)mumps; 26837ee00b23SStefano Zampini 26847ee00b23SStefano Zampini ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 26857ee00b23SStefano Zampini 26867ee00b23SStefano Zampini *F = B; 26877ee00b23SStefano Zampini PetscFunctionReturn(0); 26887ee00b23SStefano Zampini } 26897ee00b23SStefano Zampini 26907ee00b23SStefano Zampini /* MatGetFactor for Seq and MPI SELL matrices */ 26917ee00b23SStefano Zampini static PetscErrorCode MatGetFactor_sell_mumps(Mat A,MatFactorType ftype,Mat *F) 26927ee00b23SStefano Zampini { 26937ee00b23SStefano Zampini Mat B; 26947ee00b23SStefano Zampini PetscErrorCode ierr; 26957ee00b23SStefano Zampini Mat_MUMPS *mumps; 26967ee00b23SStefano Zampini PetscBool isSeqSELL; 26977ee00b23SStefano Zampini 26987ee00b23SStefano Zampini PetscFunctionBegin; 26997ee00b23SStefano Zampini /* Create the factorization matrix */ 27007ee00b23SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSELL,&isSeqSELL);CHKERRQ(ierr); 27017ee00b23SStefano Zampini ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 27027ee00b23SStefano Zampini ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 27037ee00b23SStefano Zampini ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 27047ee00b23SStefano Zampini ierr = MatSetUp(B);CHKERRQ(ierr); 27057ee00b23SStefano Zampini 27067ee00b23SStefano Zampini ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 27077ee00b23SStefano Zampini 27087ee00b23SStefano Zampini B->ops->view = MatView_MUMPS; 27097ee00b23SStefano Zampini B->ops->getinfo = MatGetInfo_MUMPS; 27107ee00b23SStefano Zampini 27117ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 27127ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 27137ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 27147ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 27157ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 27167ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 27177ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 27187ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 27197ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 27207ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 27217ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 27227ee00b23SStefano Zampini 27237ee00b23SStefano Zampini if (ftype == MAT_FACTOR_LU) { 27247ee00b23SStefano Zampini B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 27257ee00b23SStefano Zampini B->factortype = MAT_FACTOR_LU; 27267ee00b23SStefano Zampini if (isSeqSELL) mumps->ConvertToTriples = MatConvertToTriples_seqsell_seqaij; 27277ee00b23SStefano Zampini else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 27287ee00b23SStefano Zampini mumps->sym = 0; 27297ee00b23SStefano Zampini } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 27307ee00b23SStefano Zampini 27317ee00b23SStefano Zampini /* set solvertype */ 27327ee00b23SStefano Zampini ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 27337ee00b23SStefano Zampini ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 27347ee00b23SStefano Zampini 2735450b117fSShri Abhyankar B->ops->destroy = MatDestroy_MUMPS; 2736e69c285eSBarry Smith B->data = (void*)mumps; 27372205254eSKarl Rupp 2738f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2739746480a1SHong Zhang 2740450b117fSShri Abhyankar *F = B; 2741450b117fSShri Abhyankar PetscFunctionReturn(0); 2742450b117fSShri Abhyankar } 274342c9c57cSBarry Smith 27443ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_MUMPS(void) 274542c9c57cSBarry Smith { 274642c9c57cSBarry Smith PetscErrorCode ierr; 274742c9c57cSBarry Smith 274842c9c57cSBarry Smith PetscFunctionBegin; 27493ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27503ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27513ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27523ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27533ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPISBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 27543ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27553ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27563ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27573ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27583ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 27597ee00b23SStefano Zampini ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSELL,MAT_FACTOR_LU,MatGetFactor_sell_mumps);CHKERRQ(ierr); 276042c9c57cSBarry Smith PetscFunctionReturn(0); 276142c9c57cSBarry Smith } 276242c9c57cSBarry Smith 2763