11c2a3de1SBarry Smith 2397b6df1SKris Buschelman /* 3c2b5dc30SHong Zhang Provides an interface to the MUMPS sparse solver 4397b6df1SKris Buschelman */ 551d5961aSHong Zhang 6c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> /*I "petscmat.h" I*/ 7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h> 87ee00b23SStefano Zampini #include <../src/mat/impls/sell/mpi/mpisell.h> 9397b6df1SKris Buschelman 10397b6df1SKris Buschelman EXTERN_C_BEGIN 11397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 122907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 132907cef9SHong Zhang #include <cmumps_c.h> 142907cef9SHong Zhang #else 15c6db04a5SJed Brown #include <zmumps_c.h> 162907cef9SHong Zhang #endif 172907cef9SHong Zhang #else 182907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 192907cef9SHong Zhang #include <smumps_c.h> 20397b6df1SKris Buschelman #else 21c6db04a5SJed Brown #include <dmumps_c.h> 22397b6df1SKris Buschelman #endif 232907cef9SHong Zhang #endif 24397b6df1SKris Buschelman EXTERN_C_END 25397b6df1SKris Buschelman #define JOB_INIT -1 263d472b54SHong Zhang #define JOB_FACTSYMBOLIC 1 273d472b54SHong Zhang #define JOB_FACTNUMERIC 2 283d472b54SHong Zhang #define JOB_SOLVE 3 29397b6df1SKris Buschelman #define JOB_END -2 303d472b54SHong Zhang 312907cef9SHong Zhang /* calls to MUMPS */ 322907cef9SHong Zhang #if defined(PETSC_USE_COMPLEX) 332907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 343ab56b82SJunchao Zhang #define MUMPS_c cmumps_c 352907cef9SHong Zhang #else 363ab56b82SJunchao Zhang #define MUMPS_c zmumps_c 372907cef9SHong Zhang #endif 382907cef9SHong Zhang #else 392907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 403ab56b82SJunchao Zhang #define MUMPS_c smumps_c 412907cef9SHong Zhang #else 423ab56b82SJunchao Zhang #define MUMPS_c dmumps_c 432907cef9SHong Zhang #endif 442907cef9SHong Zhang #endif 452907cef9SHong Zhang 46217d3b1eSJunchao Zhang /* if using PETSc OpenMP support, we only call MUMPS on master ranks. Before/after the call, we change/restore CPUs the master ranks can run on */ 473ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 483ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 493ab56b82SJunchao Zhang do { \ 503ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { \ 513ab56b82SJunchao Zhang if (mumps->is_omp_master) { \ 523ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterBegin(mumps->omp_ctrl);CHKERRQ(ierr); \ 533ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 543ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterEnd(mumps->omp_ctrl);CHKERRQ(ierr); \ 553ab56b82SJunchao Zhang } \ 563ab56b82SJunchao Zhang ierr = PetscOmpCtrlBarrier(mumps->omp_ctrl);CHKERRQ(ierr); \ 573ab56b82SJunchao Zhang } else { \ 583ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 593ab56b82SJunchao Zhang } \ 603ab56b82SJunchao Zhang } while(0) 613ab56b82SJunchao Zhang #else 623ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 633ab56b82SJunchao Zhang do { MUMPS_c(&mumps->id); } while (0) 643ab56b82SJunchao Zhang #endif 653ab56b82SJunchao Zhang 66940cd9d6SSatish Balay /* declare MumpsScalar */ 67940cd9d6SSatish Balay #if defined(PETSC_USE_COMPLEX) 68940cd9d6SSatish Balay #if defined(PETSC_USE_REAL_SINGLE) 69940cd9d6SSatish Balay #define MumpsScalar mumps_complex 70940cd9d6SSatish Balay #else 71940cd9d6SSatish Balay #define MumpsScalar mumps_double_complex 72940cd9d6SSatish Balay #endif 73940cd9d6SSatish Balay #else 74940cd9d6SSatish Balay #define MumpsScalar PetscScalar 75940cd9d6SSatish Balay #endif 763d472b54SHong Zhang 77397b6df1SKris Buschelman /* macros s.t. indices match MUMPS documentation */ 78397b6df1SKris Buschelman #define ICNTL(I) icntl[(I)-1] 79397b6df1SKris Buschelman #define CNTL(I) cntl[(I)-1] 80397b6df1SKris Buschelman #define INFOG(I) infog[(I)-1] 81a7aca84bSHong Zhang #define INFO(I) info[(I)-1] 82397b6df1SKris Buschelman #define RINFOG(I) rinfog[(I)-1] 83adc1d99fSHong Zhang #define RINFO(I) rinfo[(I)-1] 84397b6df1SKris Buschelman 85397b6df1SKris Buschelman typedef struct { 86397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 872907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 882907cef9SHong Zhang CMUMPS_STRUC_C id; 892907cef9SHong Zhang #else 90397b6df1SKris Buschelman ZMUMPS_STRUC_C id; 912907cef9SHong Zhang #endif 922907cef9SHong Zhang #else 932907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 942907cef9SHong Zhang SMUMPS_STRUC_C id; 95397b6df1SKris Buschelman #else 96397b6df1SKris Buschelman DMUMPS_STRUC_C id; 97397b6df1SKris Buschelman #endif 982907cef9SHong Zhang #endif 992907cef9SHong Zhang 100397b6df1SKris Buschelman MatStructure matstruc; 1012d4298aeSJunchao Zhang PetscMPIInt myid,petsc_size; 102a5e57a09SHong Zhang PetscInt *irn,*jcn,nz,sym; 103397b6df1SKris Buschelman PetscScalar *val; 1042d4298aeSJunchao Zhang MPI_Comm mumps_comm; 105a5e57a09SHong Zhang PetscInt ICNTL9_pre; /* check if ICNTL(9) is changed from previous MatSolve */ 106801fbe65SHong Zhang VecScatter scat_rhs, scat_sol; /* used by MatSolve() */ 107801fbe65SHong Zhang Vec b_seq,x_seq; 108b34f08ffSHong Zhang PetscInt ninfo,*info; /* display INFO */ 109b5fa320bSStefano Zampini PetscInt sizeredrhs; 11059ac8732SStefano Zampini PetscScalar *schur_sol; 11159ac8732SStefano Zampini PetscInt schur_sizesol; 1122205254eSKarl Rupp 1133ab56b82SJunchao Zhang PetscBool use_petsc_omp_support; 1143ab56b82SJunchao Zhang PetscOmpCtrl omp_ctrl; /* an OpenMP controler that blocked processes will release their CPU (MPI_Barrier does not have this guarantee) */ 1153ab56b82SJunchao Zhang MPI_Comm petsc_comm,omp_comm; /* petsc_comm is petsc matrix's comm */ 1163ab56b82SJunchao Zhang PetscMPIInt mpinz; /* on master rank, nz = sum(mpinz) over omp_comm; on other ranks, mpinz = nz*/ 1173ab56b82SJunchao Zhang PetscMPIInt omp_comm_size; 1183ab56b82SJunchao Zhang PetscBool is_omp_master; /* is this rank the master of omp_comm */ 1193ab56b82SJunchao Zhang PetscMPIInt *recvcount,*displs; 1203ab56b82SJunchao Zhang 121bccb9932SShri Abhyankar PetscErrorCode (*ConvertToTriples)(Mat, int, MatReuse, int*, int**, int**, PetscScalar**); 122f0c56d0fSKris Buschelman } Mat_MUMPS; 123f0c56d0fSKris Buschelman 12409573ac7SBarry Smith extern PetscErrorCode MatDuplicate_MUMPS(Mat,MatDuplicateOption,Mat*); 125b24902e0SBarry Smith 12659ac8732SStefano Zampini static PetscErrorCode MatMumpsResetSchur_Private(Mat_MUMPS* mumps) 127b5fa320bSStefano Zampini { 128b5fa320bSStefano Zampini PetscErrorCode ierr; 129b5fa320bSStefano Zampini 130b5fa320bSStefano Zampini PetscFunctionBegin; 13159ac8732SStefano Zampini ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr); 13259ac8732SStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 13359ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 13459ac8732SStefano Zampini mumps->id.size_schur = 0; 135b3cb21ddSStefano Zampini mumps->id.schur_lld = 0; 13659ac8732SStefano Zampini mumps->id.ICNTL(19) = 0; 13759ac8732SStefano Zampini PetscFunctionReturn(0); 13859ac8732SStefano Zampini } 13959ac8732SStefano Zampini 140b3cb21ddSStefano Zampini /* solve with rhs in mumps->id.redrhs and return in the same location */ 141b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsSolveSchur_Private(Mat F) 14259ac8732SStefano Zampini { 143b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 144b3cb21ddSStefano Zampini Mat S,B,X; 145b3cb21ddSStefano Zampini MatFactorSchurStatus schurstatus; 146b3cb21ddSStefano Zampini PetscInt sizesol; 14759ac8732SStefano Zampini PetscErrorCode ierr; 14859ac8732SStefano Zampini 14959ac8732SStefano Zampini PetscFunctionBegin; 150b3cb21ddSStefano Zampini ierr = MatFactorFactorizeSchurComplement(F);CHKERRQ(ierr); 151b3cb21ddSStefano Zampini ierr = MatFactorGetSchurComplement(F,&S,&schurstatus);CHKERRQ(ierr); 152b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&B);CHKERRQ(ierr); 153b3cb21ddSStefano Zampini switch (schurstatus) { 154b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_FACTORED: 155b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&X);CHKERRQ(ierr); 156b3cb21ddSStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 157b3cb21ddSStefano Zampini ierr = MatMatSolveTranspose(S,B,X);CHKERRQ(ierr); 15859ac8732SStefano Zampini } else { 159b3cb21ddSStefano Zampini ierr = MatMatSolve(S,B,X);CHKERRQ(ierr); 16059ac8732SStefano Zampini } 161b3cb21ddSStefano Zampini break; 162b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_INVERTED: 163b3cb21ddSStefano Zampini sizesol = mumps->id.nrhs*mumps->id.size_schur; 16459ac8732SStefano Zampini if (!mumps->schur_sol || sizesol > mumps->schur_sizesol) { 16559ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 16659ac8732SStefano Zampini ierr = PetscMalloc1(sizesol,&mumps->schur_sol);CHKERRQ(ierr); 16759ac8732SStefano Zampini mumps->schur_sizesol = sizesol; 168b5fa320bSStefano Zampini } 169b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,mumps->schur_sol,&X);CHKERRQ(ierr); 17059ac8732SStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 171b3cb21ddSStefano Zampini ierr = MatTransposeMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 172b5fa320bSStefano Zampini } else { 173b3cb21ddSStefano Zampini ierr = MatMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 174b5fa320bSStefano Zampini } 175b3cb21ddSStefano Zampini ierr = MatCopy(X,B,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 176b3cb21ddSStefano Zampini break; 177b3cb21ddSStefano Zampini default: 178b3cb21ddSStefano Zampini SETERRQ1(PetscObjectComm((PetscObject)F),PETSC_ERR_SUP,"Unhandled MatFactorSchurStatus %D",F->schur_status); 179b3cb21ddSStefano Zampini break; 18059ac8732SStefano Zampini } 181b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,&S,schurstatus);CHKERRQ(ierr); 182b3cb21ddSStefano Zampini ierr = MatDestroy(&B);CHKERRQ(ierr); 183b3cb21ddSStefano Zampini ierr = MatDestroy(&X);CHKERRQ(ierr); 184b5fa320bSStefano Zampini PetscFunctionReturn(0); 185b5fa320bSStefano Zampini } 186b5fa320bSStefano Zampini 187b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsHandleSchur_Private(Mat F, PetscBool expansion) 188b5fa320bSStefano Zampini { 189b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 190b5fa320bSStefano Zampini PetscErrorCode ierr; 191b5fa320bSStefano Zampini 192b5fa320bSStefano Zampini PetscFunctionBegin; 193b5fa320bSStefano Zampini if (!mumps->id.ICNTL(19)) { /* do nothing when Schur complement has not been computed */ 194b5fa320bSStefano Zampini PetscFunctionReturn(0); 195b5fa320bSStefano Zampini } 196b8f61ee1SStefano Zampini if (!expansion) { /* prepare for the condensation step */ 197b5fa320bSStefano Zampini PetscInt sizeredrhs = mumps->id.nrhs*mumps->id.size_schur; 198b5fa320bSStefano Zampini /* allocate MUMPS internal array to store reduced right-hand sides */ 199b5fa320bSStefano Zampini if (!mumps->id.redrhs || sizeredrhs > mumps->sizeredrhs) { 200b5fa320bSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 201b5fa320bSStefano Zampini mumps->id.lredrhs = mumps->id.size_schur; 202b5fa320bSStefano Zampini ierr = PetscMalloc1(mumps->id.nrhs*mumps->id.lredrhs,&mumps->id.redrhs);CHKERRQ(ierr); 203b5fa320bSStefano Zampini mumps->sizeredrhs = mumps->id.nrhs*mumps->id.lredrhs; 204b5fa320bSStefano Zampini } 205b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 1; /* condensation phase */ 206b5fa320bSStefano Zampini } else { /* prepare for the expansion step */ 207b8f61ee1SStefano Zampini /* solve Schur complement (this has to be done by the MUMPS user, so basically us) */ 208b3cb21ddSStefano Zampini ierr = MatMumpsSolveSchur_Private(F);CHKERRQ(ierr); 209b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 2; /* expansion phase */ 2103ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 211b5fa320bSStefano Zampini if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 212b5fa320bSStefano Zampini /* restore defaults */ 213b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 214d3d598ffSStefano Zampini /* free MUMPS internal array for redrhs if we have solved for multiple rhs in order to save memory space */ 215d3d598ffSStefano Zampini if (mumps->id.nrhs > 1) { 216d3d598ffSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 217d3d598ffSStefano Zampini mumps->id.lredrhs = 0; 218d3d598ffSStefano Zampini mumps->sizeredrhs = 0; 219d3d598ffSStefano Zampini } 220b5fa320bSStefano Zampini } 221b5fa320bSStefano Zampini PetscFunctionReturn(0); 222b5fa320bSStefano Zampini } 223b5fa320bSStefano Zampini 224397b6df1SKris Buschelman /* 225d341cd04SHong Zhang MatConvertToTriples_A_B - convert Petsc matrix to triples: row[nz], col[nz], val[nz] 226d341cd04SHong Zhang 227397b6df1SKris Buschelman input: 22867877ebaSShri Abhyankar A - matrix in aij,baij or sbaij (bs=1) format 229397b6df1SKris Buschelman shift - 0: C style output triple; 1: Fortran style output triple. 230bccb9932SShri Abhyankar reuse - MAT_INITIAL_MATRIX: spaces are allocated and values are set for the triple 231bccb9932SShri Abhyankar MAT_REUSE_MATRIX: only the values in v array are updated 232397b6df1SKris Buschelman output: 233397b6df1SKris Buschelman nnz - dim of r, c, and v (number of local nonzero entries of A) 234397b6df1SKris Buschelman r, c, v - row and col index, matrix values (matrix triples) 235eb9baa12SBarry Smith 236eb9baa12SBarry Smith The returned values r, c, and sometimes v are obtained in a single PetscMalloc(). Then in MatDestroy_MUMPS() it is 2377ee00b23SStefano Zampini freed with PetscFree(mumps->irn); This is not ideal code, the fact that v is ONLY sometimes part of mumps->irn means 238eb9baa12SBarry Smith that the PetscMalloc() cannot easily be replaced with a PetscMalloc3(). 239eb9baa12SBarry Smith 240397b6df1SKris Buschelman */ 24116ebf90aSShri Abhyankar 242bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 243b24902e0SBarry Smith { 244185f6596SHong Zhang const PetscInt *ai,*aj,*ajj,M=A->rmap->n; 24567877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 246dfbe8321SBarry Smith PetscErrorCode ierr; 247c1490034SHong Zhang PetscInt *row,*col; 24816ebf90aSShri Abhyankar Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 249397b6df1SKris Buschelman 250397b6df1SKris Buschelman PetscFunctionBegin; 25116ebf90aSShri Abhyankar *v=aa->a; 252bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 2532205254eSKarl Rupp nz = aa->nz; 2542205254eSKarl Rupp ai = aa->i; 2552205254eSKarl Rupp aj = aa->j; 25616ebf90aSShri Abhyankar *nnz = nz; 257785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 258185f6596SHong Zhang col = row + nz; 259185f6596SHong Zhang 26016ebf90aSShri Abhyankar nz = 0; 26116ebf90aSShri Abhyankar for (i=0; i<M; i++) { 26216ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 26367877ebaSShri Abhyankar ajj = aj + ai[i]; 26467877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 26567877ebaSShri Abhyankar row[nz] = i+shift; col[nz++] = ajj[j] + shift; 26616ebf90aSShri Abhyankar } 26716ebf90aSShri Abhyankar } 26816ebf90aSShri Abhyankar *r = row; *c = col; 26916ebf90aSShri Abhyankar } 27016ebf90aSShri Abhyankar PetscFunctionReturn(0); 27116ebf90aSShri Abhyankar } 272397b6df1SKris Buschelman 2737ee00b23SStefano Zampini PetscErrorCode MatConvertToTriples_seqsell_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 2747ee00b23SStefano Zampini { 2757ee00b23SStefano Zampini Mat_SeqSELL *a=(Mat_SeqSELL*)A->data; 2767ee00b23SStefano Zampini PetscInt *ptr; 2777ee00b23SStefano Zampini 2787ee00b23SStefano Zampini PetscFunctionBegin; 2797ee00b23SStefano Zampini *v = a->val; 2807ee00b23SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 2817ee00b23SStefano Zampini PetscInt nz,i,j,row; 2827ee00b23SStefano Zampini PetscErrorCode ierr; 2837ee00b23SStefano Zampini 2847ee00b23SStefano Zampini nz = a->sliidx[a->totalslices]; 2857ee00b23SStefano Zampini *nnz = nz; 2867ee00b23SStefano Zampini ierr = PetscMalloc1(2*nz, &ptr);CHKERRQ(ierr); 2877ee00b23SStefano Zampini *r = ptr; 2887ee00b23SStefano Zampini *c = ptr + nz; 2897ee00b23SStefano Zampini 2907ee00b23SStefano Zampini for (i=0; i<a->totalslices; i++) { 2917ee00b23SStefano Zampini for (j=a->sliidx[i],row=0; j<a->sliidx[i+1]; j++,row=((row+1)&0x07)) { 2927ee00b23SStefano Zampini *ptr++ = 8*i + row + shift; 2937ee00b23SStefano Zampini } 2947ee00b23SStefano Zampini } 2957ee00b23SStefano Zampini for (i=0;i<nz;i++) *ptr++ = a->colidx[i] + shift; 2967ee00b23SStefano Zampini } 2977ee00b23SStefano Zampini PetscFunctionReturn(0); 2987ee00b23SStefano Zampini } 2997ee00b23SStefano Zampini 300bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqbaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 30167877ebaSShri Abhyankar { 30267877ebaSShri Abhyankar Mat_SeqBAIJ *aa=(Mat_SeqBAIJ*)A->data; 30333d57670SJed Brown const PetscInt *ai,*aj,*ajj,bs2 = aa->bs2; 30433d57670SJed Brown PetscInt bs,M,nz,idx=0,rnz,i,j,k,m; 30567877ebaSShri Abhyankar PetscErrorCode ierr; 30667877ebaSShri Abhyankar PetscInt *row,*col; 30767877ebaSShri Abhyankar 30867877ebaSShri Abhyankar PetscFunctionBegin; 30933d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 31033d57670SJed Brown M = A->rmap->N/bs; 311cf3759fdSShri Abhyankar *v = aa->a; 312bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 313cf3759fdSShri Abhyankar ai = aa->i; aj = aa->j; 31467877ebaSShri Abhyankar nz = bs2*aa->nz; 31567877ebaSShri Abhyankar *nnz = nz; 316785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 317185f6596SHong Zhang col = row + nz; 318185f6596SHong Zhang 31967877ebaSShri Abhyankar for (i=0; i<M; i++) { 32067877ebaSShri Abhyankar ajj = aj + ai[i]; 32167877ebaSShri Abhyankar rnz = ai[i+1] - ai[i]; 32267877ebaSShri Abhyankar for (k=0; k<rnz; k++) { 32367877ebaSShri Abhyankar for (j=0; j<bs; j++) { 32467877ebaSShri Abhyankar for (m=0; m<bs; m++) { 32567877ebaSShri Abhyankar row[idx] = i*bs + m + shift; 326cf3759fdSShri Abhyankar col[idx++] = bs*(ajj[k]) + j + shift; 32767877ebaSShri Abhyankar } 32867877ebaSShri Abhyankar } 32967877ebaSShri Abhyankar } 33067877ebaSShri Abhyankar } 331cf3759fdSShri Abhyankar *r = row; *c = col; 33267877ebaSShri Abhyankar } 33367877ebaSShri Abhyankar PetscFunctionReturn(0); 33467877ebaSShri Abhyankar } 33567877ebaSShri Abhyankar 336bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqsbaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 33716ebf90aSShri Abhyankar { 33867877ebaSShri Abhyankar const PetscInt *ai, *aj,*ajj,M=A->rmap->n; 33967877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 34016ebf90aSShri Abhyankar PetscErrorCode ierr; 34116ebf90aSShri Abhyankar PetscInt *row,*col; 34216ebf90aSShri Abhyankar Mat_SeqSBAIJ *aa=(Mat_SeqSBAIJ*)A->data; 34316ebf90aSShri Abhyankar 34416ebf90aSShri Abhyankar PetscFunctionBegin; 345882afa5aSHong Zhang *v = aa->a; 346bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 3472205254eSKarl Rupp nz = aa->nz; 3482205254eSKarl Rupp ai = aa->i; 3492205254eSKarl Rupp aj = aa->j; 3502205254eSKarl Rupp *v = aa->a; 35116ebf90aSShri Abhyankar *nnz = nz; 352785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 353185f6596SHong Zhang col = row + nz; 354185f6596SHong Zhang 35516ebf90aSShri Abhyankar nz = 0; 35616ebf90aSShri Abhyankar for (i=0; i<M; i++) { 35716ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 35867877ebaSShri Abhyankar ajj = aj + ai[i]; 35967877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 36067877ebaSShri Abhyankar row[nz] = i+shift; col[nz++] = ajj[j] + shift; 36116ebf90aSShri Abhyankar } 36216ebf90aSShri Abhyankar } 36316ebf90aSShri Abhyankar *r = row; *c = col; 36416ebf90aSShri Abhyankar } 36516ebf90aSShri Abhyankar PetscFunctionReturn(0); 36616ebf90aSShri Abhyankar } 36716ebf90aSShri Abhyankar 368bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 36916ebf90aSShri Abhyankar { 37067877ebaSShri Abhyankar const PetscInt *ai,*aj,*ajj,*adiag,M=A->rmap->n; 37167877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 37267877ebaSShri Abhyankar const PetscScalar *av,*v1; 37316ebf90aSShri Abhyankar PetscScalar *val; 37416ebf90aSShri Abhyankar PetscErrorCode ierr; 37516ebf90aSShri Abhyankar PetscInt *row,*col; 376829b1710SHong Zhang Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 37729b521d4Sstefano_zampini PetscBool missing; 37816ebf90aSShri Abhyankar 37916ebf90aSShri Abhyankar PetscFunctionBegin; 38016ebf90aSShri Abhyankar ai = aa->i; aj = aa->j; av = aa->a; 38116ebf90aSShri Abhyankar adiag = aa->diag; 38229b521d4Sstefano_zampini ierr = MatMissingDiagonal_SeqAIJ(A,&missing,&i);CHKERRQ(ierr); 383bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 3847ee00b23SStefano Zampini /* count nz in the upper triangular part of A */ 385829b1710SHong Zhang nz = 0; 38629b521d4Sstefano_zampini if (missing) { 38729b521d4Sstefano_zampini for (i=0; i<M; i++) { 38829b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 38929b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 39029b521d4Sstefano_zampini if (aj[j] < i) continue; 39129b521d4Sstefano_zampini nz++; 39229b521d4Sstefano_zampini } 39329b521d4Sstefano_zampini } else { 39429b521d4Sstefano_zampini nz += ai[i+1] - adiag[i]; 39529b521d4Sstefano_zampini } 39629b521d4Sstefano_zampini } 39729b521d4Sstefano_zampini } else { 398829b1710SHong Zhang for (i=0; i<M; i++) nz += ai[i+1] - adiag[i]; 39929b521d4Sstefano_zampini } 40016ebf90aSShri Abhyankar *nnz = nz; 401829b1710SHong Zhang 402185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 403185f6596SHong Zhang col = row + nz; 404185f6596SHong Zhang val = (PetscScalar*)(col + nz); 405185f6596SHong Zhang 40616ebf90aSShri Abhyankar nz = 0; 40729b521d4Sstefano_zampini if (missing) { 40829b521d4Sstefano_zampini for (i=0; i<M; i++) { 40929b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 41029b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 41129b521d4Sstefano_zampini if (aj[j] < i) continue; 41229b521d4Sstefano_zampini row[nz] = i+shift; 41329b521d4Sstefano_zampini col[nz] = aj[j]+shift; 41429b521d4Sstefano_zampini val[nz] = av[j]; 41529b521d4Sstefano_zampini nz++; 41629b521d4Sstefano_zampini } 41729b521d4Sstefano_zampini } else { 41829b521d4Sstefano_zampini rnz = ai[i+1] - adiag[i]; 41929b521d4Sstefano_zampini ajj = aj + adiag[i]; 42029b521d4Sstefano_zampini v1 = av + adiag[i]; 42129b521d4Sstefano_zampini for (j=0; j<rnz; j++) { 42229b521d4Sstefano_zampini row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 42329b521d4Sstefano_zampini } 42429b521d4Sstefano_zampini } 42529b521d4Sstefano_zampini } 42629b521d4Sstefano_zampini } else { 42716ebf90aSShri Abhyankar for (i=0; i<M; i++) { 42816ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 42967877ebaSShri Abhyankar ajj = aj + adiag[i]; 430cf3759fdSShri Abhyankar v1 = av + adiag[i]; 43167877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 43267877ebaSShri Abhyankar row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 43316ebf90aSShri Abhyankar } 43416ebf90aSShri Abhyankar } 43529b521d4Sstefano_zampini } 43616ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 437397b6df1SKris Buschelman } else { 43816ebf90aSShri Abhyankar nz = 0; val = *v; 43929b521d4Sstefano_zampini if (missing) { 44016ebf90aSShri Abhyankar for (i=0; i <M; i++) { 44129b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 44229b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 44329b521d4Sstefano_zampini if (aj[j] < i) continue; 44429b521d4Sstefano_zampini val[nz++] = av[j]; 44529b521d4Sstefano_zampini } 44629b521d4Sstefano_zampini } else { 44716ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 44867877ebaSShri Abhyankar v1 = av + adiag[i]; 44967877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 45067877ebaSShri Abhyankar val[nz++] = v1[j]; 45116ebf90aSShri Abhyankar } 45216ebf90aSShri Abhyankar } 45316ebf90aSShri Abhyankar } 45429b521d4Sstefano_zampini } else { 45516ebf90aSShri Abhyankar for (i=0; i <M; i++) { 45616ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 45716ebf90aSShri Abhyankar v1 = av + adiag[i]; 45816ebf90aSShri Abhyankar for (j=0; j<rnz; j++) { 45916ebf90aSShri Abhyankar val[nz++] = v1[j]; 46016ebf90aSShri Abhyankar } 46116ebf90aSShri Abhyankar } 46216ebf90aSShri Abhyankar } 46329b521d4Sstefano_zampini } 46416ebf90aSShri Abhyankar PetscFunctionReturn(0); 46516ebf90aSShri Abhyankar } 46616ebf90aSShri Abhyankar 467bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpisbaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 46816ebf90aSShri Abhyankar { 46916ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 47016ebf90aSShri Abhyankar PetscErrorCode ierr; 47116ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 47216ebf90aSShri Abhyankar PetscInt *row,*col; 47316ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 47416ebf90aSShri Abhyankar PetscScalar *val; 475397b6df1SKris Buschelman Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)A->data; 476397b6df1SKris Buschelman Mat_SeqSBAIJ *aa = (Mat_SeqSBAIJ*)(mat->A)->data; 477397b6df1SKris Buschelman Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 47816ebf90aSShri Abhyankar 47916ebf90aSShri Abhyankar PetscFunctionBegin; 480d0f46423SBarry Smith ai=aa->i; aj=aa->j; bi=bb->i; bj=bb->j; rstart= A->rmap->rstart; 481397b6df1SKris Buschelman av=aa->a; bv=bb->a; 482397b6df1SKris Buschelman 4832205254eSKarl Rupp garray = mat->garray; 4842205254eSKarl Rupp 485bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 48616ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 48716ebf90aSShri Abhyankar *nnz = nz; 488185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 489185f6596SHong Zhang col = row + nz; 490185f6596SHong Zhang val = (PetscScalar*)(col + nz); 491185f6596SHong Zhang 492397b6df1SKris Buschelman *r = row; *c = col; *v = val; 493397b6df1SKris Buschelman } else { 494397b6df1SKris Buschelman row = *r; col = *c; val = *v; 495397b6df1SKris Buschelman } 496397b6df1SKris Buschelman 497028e57e8SHong Zhang jj = 0; irow = rstart; 498397b6df1SKris Buschelman for (i=0; i<m; i++) { 499397b6df1SKris Buschelman ajj = aj + ai[i]; /* ptr to the beginning of this row */ 500397b6df1SKris Buschelman countA = ai[i+1] - ai[i]; 501397b6df1SKris Buschelman countB = bi[i+1] - bi[i]; 502397b6df1SKris Buschelman bjj = bj + bi[i]; 50316ebf90aSShri Abhyankar v1 = av + ai[i]; 50416ebf90aSShri Abhyankar v2 = bv + bi[i]; 505397b6df1SKris Buschelman 506397b6df1SKris Buschelman /* A-part */ 507397b6df1SKris Buschelman for (j=0; j<countA; j++) { 508bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 509397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 510397b6df1SKris Buschelman } 51116ebf90aSShri Abhyankar val[jj++] = v1[j]; 512397b6df1SKris Buschelman } 51316ebf90aSShri Abhyankar 51416ebf90aSShri Abhyankar /* B-part */ 51516ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 516bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 517397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 518397b6df1SKris Buschelman } 51916ebf90aSShri Abhyankar val[jj++] = v2[j]; 52016ebf90aSShri Abhyankar } 52116ebf90aSShri Abhyankar irow++; 52216ebf90aSShri Abhyankar } 52316ebf90aSShri Abhyankar PetscFunctionReturn(0); 52416ebf90aSShri Abhyankar } 52516ebf90aSShri Abhyankar 526bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 52716ebf90aSShri Abhyankar { 52816ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 52916ebf90aSShri Abhyankar PetscErrorCode ierr; 53016ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 53116ebf90aSShri Abhyankar PetscInt *row,*col; 53216ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 53316ebf90aSShri Abhyankar PetscScalar *val; 53416ebf90aSShri Abhyankar Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 53516ebf90aSShri Abhyankar Mat_SeqAIJ *aa = (Mat_SeqAIJ*)(mat->A)->data; 53616ebf90aSShri Abhyankar Mat_SeqAIJ *bb = (Mat_SeqAIJ*)(mat->B)->data; 53716ebf90aSShri Abhyankar 53816ebf90aSShri Abhyankar PetscFunctionBegin; 53916ebf90aSShri Abhyankar ai=aa->i; aj=aa->j; bi=bb->i; bj=bb->j; rstart= A->rmap->rstart; 54016ebf90aSShri Abhyankar av=aa->a; bv=bb->a; 54116ebf90aSShri Abhyankar 5422205254eSKarl Rupp garray = mat->garray; 5432205254eSKarl Rupp 544bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 54516ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 54616ebf90aSShri Abhyankar *nnz = nz; 547185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 548185f6596SHong Zhang col = row + nz; 549185f6596SHong Zhang val = (PetscScalar*)(col + nz); 550185f6596SHong Zhang 55116ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 55216ebf90aSShri Abhyankar } else { 55316ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 55416ebf90aSShri Abhyankar } 55516ebf90aSShri Abhyankar 55616ebf90aSShri Abhyankar jj = 0; irow = rstart; 55716ebf90aSShri Abhyankar for (i=0; i<m; i++) { 55816ebf90aSShri Abhyankar ajj = aj + ai[i]; /* ptr to the beginning of this row */ 55916ebf90aSShri Abhyankar countA = ai[i+1] - ai[i]; 56016ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 56116ebf90aSShri Abhyankar bjj = bj + bi[i]; 56216ebf90aSShri Abhyankar v1 = av + ai[i]; 56316ebf90aSShri Abhyankar v2 = bv + bi[i]; 56416ebf90aSShri Abhyankar 56516ebf90aSShri Abhyankar /* A-part */ 56616ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 567bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 56816ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 56916ebf90aSShri Abhyankar } 57016ebf90aSShri Abhyankar val[jj++] = v1[j]; 57116ebf90aSShri Abhyankar } 57216ebf90aSShri Abhyankar 57316ebf90aSShri Abhyankar /* B-part */ 57416ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 575bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 57616ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 57716ebf90aSShri Abhyankar } 57816ebf90aSShri Abhyankar val[jj++] = v2[j]; 57916ebf90aSShri Abhyankar } 58016ebf90aSShri Abhyankar irow++; 58116ebf90aSShri Abhyankar } 58216ebf90aSShri Abhyankar PetscFunctionReturn(0); 58316ebf90aSShri Abhyankar } 58416ebf90aSShri Abhyankar 585bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpibaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 58667877ebaSShri Abhyankar { 58767877ebaSShri Abhyankar Mat_MPIBAIJ *mat = (Mat_MPIBAIJ*)A->data; 58867877ebaSShri Abhyankar Mat_SeqBAIJ *aa = (Mat_SeqBAIJ*)(mat->A)->data; 58967877ebaSShri Abhyankar Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 59067877ebaSShri Abhyankar const PetscInt *ai = aa->i, *bi = bb->i, *aj = aa->j, *bj = bb->j,*ajj, *bjj; 591d985c460SShri Abhyankar const PetscInt *garray = mat->garray,mbs=mat->mbs,rstart=A->rmap->rstart; 59233d57670SJed Brown const PetscInt bs2=mat->bs2; 59367877ebaSShri Abhyankar PetscErrorCode ierr; 59433d57670SJed Brown PetscInt bs,nz,i,j,k,n,jj,irow,countA,countB,idx; 59567877ebaSShri Abhyankar PetscInt *row,*col; 59667877ebaSShri Abhyankar const PetscScalar *av=aa->a, *bv=bb->a,*v1,*v2; 59767877ebaSShri Abhyankar PetscScalar *val; 59867877ebaSShri Abhyankar 59967877ebaSShri Abhyankar PetscFunctionBegin; 60033d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 601bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 60267877ebaSShri Abhyankar nz = bs2*(aa->nz + bb->nz); 60367877ebaSShri Abhyankar *nnz = nz; 604185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 605185f6596SHong Zhang col = row + nz; 606185f6596SHong Zhang val = (PetscScalar*)(col + nz); 607185f6596SHong Zhang 60867877ebaSShri Abhyankar *r = row; *c = col; *v = val; 60967877ebaSShri Abhyankar } else { 61067877ebaSShri Abhyankar row = *r; col = *c; val = *v; 61167877ebaSShri Abhyankar } 61267877ebaSShri Abhyankar 613d985c460SShri Abhyankar jj = 0; irow = rstart; 61467877ebaSShri Abhyankar for (i=0; i<mbs; i++) { 61567877ebaSShri Abhyankar countA = ai[i+1] - ai[i]; 61667877ebaSShri Abhyankar countB = bi[i+1] - bi[i]; 61767877ebaSShri Abhyankar ajj = aj + ai[i]; 61867877ebaSShri Abhyankar bjj = bj + bi[i]; 61967877ebaSShri Abhyankar v1 = av + bs2*ai[i]; 62067877ebaSShri Abhyankar v2 = bv + bs2*bi[i]; 62167877ebaSShri Abhyankar 62267877ebaSShri Abhyankar idx = 0; 62367877ebaSShri Abhyankar /* A-part */ 62467877ebaSShri Abhyankar for (k=0; k<countA; k++) { 62567877ebaSShri Abhyankar for (j=0; j<bs; j++) { 62667877ebaSShri Abhyankar for (n=0; n<bs; n++) { 627bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 628d985c460SShri Abhyankar row[jj] = irow + n + shift; 629d985c460SShri Abhyankar col[jj] = rstart + bs*ajj[k] + j + shift; 63067877ebaSShri Abhyankar } 63167877ebaSShri Abhyankar val[jj++] = v1[idx++]; 63267877ebaSShri Abhyankar } 63367877ebaSShri Abhyankar } 63467877ebaSShri Abhyankar } 63567877ebaSShri Abhyankar 63667877ebaSShri Abhyankar idx = 0; 63767877ebaSShri Abhyankar /* B-part */ 63867877ebaSShri Abhyankar for (k=0; k<countB; k++) { 63967877ebaSShri Abhyankar for (j=0; j<bs; j++) { 64067877ebaSShri Abhyankar for (n=0; n<bs; n++) { 641bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 642d985c460SShri Abhyankar row[jj] = irow + n + shift; 643d985c460SShri Abhyankar col[jj] = bs*garray[bjj[k]] + j + shift; 64467877ebaSShri Abhyankar } 645d985c460SShri Abhyankar val[jj++] = v2[idx++]; 64667877ebaSShri Abhyankar } 64767877ebaSShri Abhyankar } 64867877ebaSShri Abhyankar } 649d985c460SShri Abhyankar irow += bs; 65067877ebaSShri Abhyankar } 65167877ebaSShri Abhyankar PetscFunctionReturn(0); 65267877ebaSShri Abhyankar } 65367877ebaSShri Abhyankar 654bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 65516ebf90aSShri Abhyankar { 65616ebf90aSShri Abhyankar const PetscInt *ai, *aj,*adiag, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 65716ebf90aSShri Abhyankar PetscErrorCode ierr; 658e0bace9bSHong Zhang PetscInt rstart,nz,nza,nzb,i,j,jj,irow,countA,countB; 65916ebf90aSShri Abhyankar PetscInt *row,*col; 66016ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 66116ebf90aSShri Abhyankar PetscScalar *val; 66216ebf90aSShri Abhyankar Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 66316ebf90aSShri Abhyankar Mat_SeqAIJ *aa =(Mat_SeqAIJ*)(mat->A)->data; 66416ebf90aSShri Abhyankar Mat_SeqAIJ *bb =(Mat_SeqAIJ*)(mat->B)->data; 66516ebf90aSShri Abhyankar 66616ebf90aSShri Abhyankar PetscFunctionBegin; 66716ebf90aSShri Abhyankar ai=aa->i; aj=aa->j; adiag=aa->diag; 66816ebf90aSShri Abhyankar bi=bb->i; bj=bb->j; garray = mat->garray; 66916ebf90aSShri Abhyankar av=aa->a; bv=bb->a; 6702205254eSKarl Rupp 67116ebf90aSShri Abhyankar rstart = A->rmap->rstart; 67216ebf90aSShri Abhyankar 673bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 674e0bace9bSHong Zhang nza = 0; /* num of upper triangular entries in mat->A, including diagonals */ 675e0bace9bSHong Zhang nzb = 0; /* num of upper triangular entries in mat->B */ 67616ebf90aSShri Abhyankar for (i=0; i<m; i++) { 677e0bace9bSHong Zhang nza += (ai[i+1] - adiag[i]); 67816ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 67916ebf90aSShri Abhyankar bjj = bj + bi[i]; 680e0bace9bSHong Zhang for (j=0; j<countB; j++) { 681e0bace9bSHong Zhang if (garray[bjj[j]] > rstart) nzb++; 682e0bace9bSHong Zhang } 683e0bace9bSHong Zhang } 68416ebf90aSShri Abhyankar 685e0bace9bSHong Zhang nz = nza + nzb; /* total nz of upper triangular part of mat */ 68616ebf90aSShri Abhyankar *nnz = nz; 687185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 688185f6596SHong Zhang col = row + nz; 689185f6596SHong Zhang val = (PetscScalar*)(col + nz); 690185f6596SHong Zhang 69116ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 69216ebf90aSShri Abhyankar } else { 69316ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 69416ebf90aSShri Abhyankar } 69516ebf90aSShri Abhyankar 69616ebf90aSShri Abhyankar jj = 0; irow = rstart; 69716ebf90aSShri Abhyankar for (i=0; i<m; i++) { 69816ebf90aSShri Abhyankar ajj = aj + adiag[i]; /* ptr to the beginning of the diagonal of this row */ 69916ebf90aSShri Abhyankar v1 = av + adiag[i]; 70016ebf90aSShri Abhyankar countA = ai[i+1] - adiag[i]; 70116ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 70216ebf90aSShri Abhyankar bjj = bj + bi[i]; 70316ebf90aSShri Abhyankar v2 = bv + bi[i]; 70416ebf90aSShri Abhyankar 70516ebf90aSShri Abhyankar /* A-part */ 70616ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 707bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 70816ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 70916ebf90aSShri Abhyankar } 71016ebf90aSShri Abhyankar val[jj++] = v1[j]; 71116ebf90aSShri Abhyankar } 71216ebf90aSShri Abhyankar 71316ebf90aSShri Abhyankar /* B-part */ 71416ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 71516ebf90aSShri Abhyankar if (garray[bjj[j]] > rstart) { 716bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 71716ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 71816ebf90aSShri Abhyankar } 71916ebf90aSShri Abhyankar val[jj++] = v2[j]; 72016ebf90aSShri Abhyankar } 721397b6df1SKris Buschelman } 722397b6df1SKris Buschelman irow++; 723397b6df1SKris Buschelman } 724397b6df1SKris Buschelman PetscFunctionReturn(0); 725397b6df1SKris Buschelman } 726397b6df1SKris Buschelman 727dfbe8321SBarry Smith PetscErrorCode MatDestroy_MUMPS(Mat A) 728dfbe8321SBarry Smith { 729e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 730dfbe8321SBarry Smith PetscErrorCode ierr; 731b24902e0SBarry Smith 732397b6df1SKris Buschelman PetscFunctionBegin; 733a5e57a09SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 734a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_rhs);CHKERRQ(ierr); 735a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 736801fbe65SHong Zhang ierr = VecDestroy(&mumps->b_seq);CHKERRQ(ierr); 737a5e57a09SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 738a5e57a09SHong Zhang ierr = PetscFree(mumps->id.perm_in);CHKERRQ(ierr); 739a5e57a09SHong Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); 740b34f08ffSHong Zhang ierr = PetscFree(mumps->info);CHKERRQ(ierr); 74159ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 742a5e57a09SHong Zhang mumps->id.job = JOB_END; 7433ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 7443ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 7453ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { ierr = PetscOmpCtrlDestroy(&mumps->omp_ctrl);CHKERRQ(ierr); } 7463ab56b82SJunchao Zhang #endif 7473ab56b82SJunchao Zhang ierr = PetscFree2(mumps->recvcount,mumps->displs);CHKERRQ(ierr); 748e69c285eSBarry Smith ierr = PetscFree(A->data);CHKERRQ(ierr); 749bf0cc555SLisandro Dalcin 75097969023SHong Zhang /* clear composed functions */ 7513ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 7525a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSetSchurIS_C",NULL);CHKERRQ(ierr); 7535a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorCreateSchurComplement_C",NULL);CHKERRQ(ierr); 754bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetIcntl_C",NULL);CHKERRQ(ierr); 755bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetIcntl_C",NULL);CHKERRQ(ierr); 756bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetCntl_C",NULL);CHKERRQ(ierr); 757bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetCntl_C",NULL);CHKERRQ(ierr); 758ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfo_C",NULL);CHKERRQ(ierr); 759ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfog_C",NULL);CHKERRQ(ierr); 760ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfo_C",NULL);CHKERRQ(ierr); 761ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfog_C",NULL);CHKERRQ(ierr); 76289a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverse_C",NULL);CHKERRQ(ierr); 7630e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverseTranspose_C",NULL);CHKERRQ(ierr); 764397b6df1SKris Buschelman PetscFunctionReturn(0); 765397b6df1SKris Buschelman } 766397b6df1SKris Buschelman 767b24902e0SBarry Smith PetscErrorCode MatSolve_MUMPS(Mat A,Vec b,Vec x) 768b24902e0SBarry Smith { 769e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 770d54de34fSKris Buschelman PetscScalar *array; 77167877ebaSShri Abhyankar Vec b_seq; 772329ec9b3SHong Zhang IS is_iden,is_petsc; 773dfbe8321SBarry Smith PetscErrorCode ierr; 774329ec9b3SHong Zhang PetscInt i; 775cc86f929SStefano Zampini PetscBool second_solve = PETSC_FALSE; 776883f2eb9SBarry Smith static PetscBool cite1 = PETSC_FALSE,cite2 = PETSC_FALSE; 777397b6df1SKris Buschelman 778397b6df1SKris Buschelman PetscFunctionBegin; 779883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS01,\n author = {P.~R. Amestoy and I.~S. Duff and J.-Y. L'Excellent and J. Koster},\n title = {A fully asynchronous multifrontal solver using distributed dynamic scheduling},\n journal = {SIAM Journal on Matrix Analysis and Applications},\n volume = {23},\n number = {1},\n pages = {15--41},\n year = {2001}\n}\n",&cite1);CHKERRQ(ierr); 780883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS02,\n author = {P.~R. Amestoy and A. Guermouche and J.-Y. L'Excellent and S. Pralet},\n title = {Hybrid scheduling for the parallel solution of linear systems},\n journal = {Parallel Computing},\n volume = {32},\n number = {2},\n pages = {136--156},\n year = {2006}\n}\n",&cite2);CHKERRQ(ierr); 7812aca8efcSHong Zhang 782603e8f96SBarry Smith if (A->factorerrortype) { 7832aca8efcSHong Zhang ierr = PetscInfo2(A,"MatSolve is called with singular matrix factor, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 7842aca8efcSHong Zhang ierr = VecSetInf(x);CHKERRQ(ierr); 7852aca8efcSHong Zhang PetscFunctionReturn(0); 7862aca8efcSHong Zhang } 7872aca8efcSHong Zhang 788be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 789a5e57a09SHong Zhang mumps->id.nrhs = 1; 790a5e57a09SHong Zhang b_seq = mumps->b_seq; 7912d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 792329ec9b3SHong Zhang /* MUMPS only supports centralized rhs. Scatter b into a seqential rhs vector */ 793a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 794a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 795a5e57a09SHong Zhang if (!mumps->myid) {ierr = VecGetArray(b_seq,&array);CHKERRQ(ierr);} 7963ab56b82SJunchao Zhang } else { /* petsc_size == 1 */ 797397b6df1SKris Buschelman ierr = VecCopy(b,x);CHKERRQ(ierr); 798397b6df1SKris Buschelman ierr = VecGetArray(x,&array);CHKERRQ(ierr); 799397b6df1SKris Buschelman } 800a5e57a09SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 801a5e57a09SHong Zhang mumps->id.nrhs = 1; 802940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)array; 803397b6df1SKris Buschelman } 804397b6df1SKris Buschelman 805cc86f929SStefano Zampini /* 806cc86f929SStefano Zampini handle condensation step of Schur complement (if any) 807cc86f929SStefano Zampini We set by default ICNTL(26) == -1 when Schur indices have been provided by the user. 808cc86f929SStefano Zampini According to MUMPS (5.0.0) manual, any value should be harmful during the factorization phase 809cc86f929SStefano Zampini Unless the user provides a valid value for ICNTL(26), MatSolve and MatMatSolve routines solve the full system. 810cc86f929SStefano Zampini This requires an extra call to PetscMUMPS_c and the computation of the factors for S 811cc86f929SStefano Zampini */ 812583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 8132d4298aeSJunchao Zhang if (mumps->petsc_size > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 814cc86f929SStefano Zampini second_solve = PETSC_TRUE; 815b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 816cc86f929SStefano Zampini } 817397b6df1SKris Buschelman /* solve phase */ 818329ec9b3SHong Zhang /*-------------*/ 819a5e57a09SHong Zhang mumps->id.job = JOB_SOLVE; 8203ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 821a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 822397b6df1SKris Buschelman 823b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 824cc86f929SStefano Zampini if (second_solve) { 825b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 826cc86f929SStefano Zampini } 827b5fa320bSStefano Zampini 8282d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { /* convert mumps distributed solution to petsc mpi x */ 829a5e57a09SHong Zhang if (mumps->scat_sol && mumps->ICNTL9_pre != mumps->id.ICNTL(9)) { 830a5e57a09SHong Zhang /* when id.ICNTL(9) changes, the contents of lsol_loc may change (not its size, lsol_loc), recreates scat_sol */ 831a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 832397b6df1SKris Buschelman } 833a5e57a09SHong Zhang if (!mumps->scat_sol) { /* create scatter scat_sol */ 834a5e57a09SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,mumps->id.lsol_loc,0,1,&is_iden);CHKERRQ(ierr); /* from */ 835a5e57a09SHong Zhang for (i=0; i<mumps->id.lsol_loc; i++) { 836a5e57a09SHong Zhang mumps->id.isol_loc[i] -= 1; /* change Fortran style to C style */ 837a5e57a09SHong Zhang } 838a5e57a09SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,mumps->id.lsol_loc,mumps->id.isol_loc,PETSC_COPY_VALUES,&is_petsc);CHKERRQ(ierr); /* to */ 8399448b7f1SJunchao Zhang ierr = VecScatterCreate(mumps->x_seq,is_iden,x,is_petsc,&mumps->scat_sol);CHKERRQ(ierr); 8406bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 8416bf464f9SBarry Smith ierr = ISDestroy(&is_petsc);CHKERRQ(ierr); 8422205254eSKarl Rupp 843a5e57a09SHong Zhang mumps->ICNTL9_pre = mumps->id.ICNTL(9); /* save current value of id.ICNTL(9) */ 844397b6df1SKris Buschelman } 845a5e57a09SHong Zhang 846a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 847a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 848329ec9b3SHong Zhang } 849353d7d71SJunchao Zhang 850353d7d71SJunchao Zhang if (mumps->petsc_size > 1) {if (!mumps->myid) {ierr = VecRestoreArray(b_seq,&array);CHKERRQ(ierr);}} 851353d7d71SJunchao Zhang else {ierr = VecRestoreArray(x,&array);CHKERRQ(ierr);} 852353d7d71SJunchao Zhang 8539880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*mumps->id.RINFO(3));CHKERRQ(ierr); 854397b6df1SKris Buschelman PetscFunctionReturn(0); 855397b6df1SKris Buschelman } 856397b6df1SKris Buschelman 85751d5961aSHong Zhang PetscErrorCode MatSolveTranspose_MUMPS(Mat A,Vec b,Vec x) 85851d5961aSHong Zhang { 859e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 86051d5961aSHong Zhang PetscErrorCode ierr; 86151d5961aSHong Zhang 86251d5961aSHong Zhang PetscFunctionBegin; 863a5e57a09SHong Zhang mumps->id.ICNTL(9) = 0; 8640ad0caddSJed Brown ierr = MatSolve_MUMPS(A,b,x);CHKERRQ(ierr); 865a5e57a09SHong Zhang mumps->id.ICNTL(9) = 1; 86651d5961aSHong Zhang PetscFunctionReturn(0); 86751d5961aSHong Zhang } 86851d5961aSHong Zhang 869e0b74bf9SHong Zhang PetscErrorCode MatMatSolve_MUMPS(Mat A,Mat B,Mat X) 870e0b74bf9SHong Zhang { 871bda8bf91SBarry Smith PetscErrorCode ierr; 872b8491c3eSStefano Zampini Mat Bt = NULL; 873b8491c3eSStefano Zampini PetscBool flg, flgT; 874e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 875334c5f61SHong Zhang PetscInt i,nrhs,M; 8761683a169SBarry Smith PetscScalar *array; 8771683a169SBarry Smith const PetscScalar *rbray; 8785b7de3c2SKarl Rupp PetscInt lsol_loc,nlsol_loc,*isol_loc,*idxx,*isol_loc_save,iidx = 0; 8791683a169SBarry Smith PetscScalar *bray,*sol_loc,*sol_loc_save; 880be818407SHong Zhang IS is_to,is_from; 881beae5ec0SHong Zhang PetscInt k,proc,j,m,myrstart; 882be818407SHong Zhang const PetscInt *rstart; 883beae5ec0SHong Zhang Vec v_mpi,b_seq,msol_loc; 884be818407SHong Zhang VecScatter scat_rhs,scat_sol; 885be818407SHong Zhang PetscScalar *aa; 886be818407SHong Zhang PetscInt spnr,*ia,*ja; 887d56c302dSHong Zhang Mat_MPIAIJ *b = NULL; 888bda8bf91SBarry Smith 889e0b74bf9SHong Zhang PetscFunctionBegin; 890be818407SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)X,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 891be818407SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_ARG_WRONG,"Matrix X must be MATDENSE matrix"); 892be818407SHong Zhang 8930298fd71SBarry Smith ierr = PetscObjectTypeCompareAny((PetscObject)B,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 894be818407SHong Zhang if (flg) { /* dense B */ 895c0be3364SHong Zhang if (B->rmap->n != X->rmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Matrix B and X must have same row distribution"); 896be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 8970e6b8875SHong Zhang } else { /* sparse B */ 898be818407SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)B,MATTRANSPOSEMAT,&flgT);CHKERRQ(ierr); 8990e6b8875SHong Zhang if (flgT) { /* input B is transpose of actural RHS matrix, 9000e6b8875SHong Zhang because mumps requires sparse compressed COLUMN storage! See MatMatTransposeSolve_MUMPS() */ 901be818407SHong Zhang ierr = MatTransposeGetMat(B,&Bt);CHKERRQ(ierr); 9020f52d626SJunchao Zhang } else SETERRQ(PetscObjectComm((PetscObject)B),PETSC_ERR_ARG_WRONG,"Matrix B must be MATTRANSPOSEMAT matrix"); 903be818407SHong Zhang mumps->id.ICNTL(20)= 1; /* sparse RHS */ 904b8491c3eSStefano Zampini } 90587b22cf4SHong Zhang 9069481e6e9SHong Zhang ierr = MatGetSize(B,&M,&nrhs);CHKERRQ(ierr); 9079481e6e9SHong Zhang mumps->id.nrhs = nrhs; 9089481e6e9SHong Zhang mumps->id.lrhs = M; 9092b691707SHong Zhang mumps->id.rhs = NULL; 9109481e6e9SHong Zhang 9112d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 912b8491c3eSStefano Zampini PetscScalar *aa; 913b8491c3eSStefano Zampini PetscInt spnr,*ia,*ja; 914e94cce23SStefano Zampini PetscBool second_solve = PETSC_FALSE; 915b8491c3eSStefano Zampini 9162cd7d884SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 917b8491c3eSStefano Zampini mumps->id.rhs = (MumpsScalar*)array; 9182b691707SHong Zhang 9192b691707SHong Zhang if (!Bt) { /* dense B */ 9202b691707SHong Zhang /* copy B to X */ 9211683a169SBarry Smith ierr = MatDenseGetArrayRead(B,&rbray);CHKERRQ(ierr); 922580bdb30SBarry Smith ierr = PetscArraycpy(array,rbray,M*nrhs);CHKERRQ(ierr); 9231683a169SBarry Smith ierr = MatDenseRestoreArrayRead(B,&rbray);CHKERRQ(ierr); 9242b691707SHong Zhang } else { /* sparse B */ 925b8491c3eSStefano Zampini ierr = MatSeqAIJGetArray(Bt,&aa);CHKERRQ(ierr); 926be818407SHong Zhang ierr = MatGetRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 927c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 9282b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 929b8491c3eSStefano Zampini mumps->id.irhs_ptr = ia; 930b8491c3eSStefano Zampini mumps->id.irhs_sparse = ja; 931b8491c3eSStefano Zampini mumps->id.nz_rhs = ia[spnr] - 1; 932b8491c3eSStefano Zampini mumps->id.rhs_sparse = (MumpsScalar*)aa; 933b8491c3eSStefano Zampini } 934e94cce23SStefano Zampini /* handle condensation step of Schur complement (if any) */ 935583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 936e94cce23SStefano Zampini second_solve = PETSC_TRUE; 937b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 938e94cce23SStefano Zampini } 9392cd7d884SHong Zhang /* solve phase */ 9402cd7d884SHong Zhang /*-------------*/ 9412cd7d884SHong Zhang mumps->id.job = JOB_SOLVE; 9423ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 9432cd7d884SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 944b5fa320bSStefano Zampini 945b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 946e94cce23SStefano Zampini if (second_solve) { 947b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 948e94cce23SStefano Zampini } 9492b691707SHong Zhang if (Bt) { /* sparse B */ 950b8491c3eSStefano Zampini ierr = MatSeqAIJRestoreArray(Bt,&aa);CHKERRQ(ierr); 951be818407SHong Zhang ierr = MatRestoreRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 952c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 953b8491c3eSStefano Zampini } 9542cd7d884SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 955be818407SHong Zhang PetscFunctionReturn(0); 956be818407SHong Zhang } 957801fbe65SHong Zhang 958be818407SHong Zhang /*--------- parallel case: MUMPS requires rhs B to be centralized on the host! --------*/ 9592d4298aeSJunchao Zhang if (mumps->petsc_size > 1 && mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 960241dbb5eSStefano Zampini 961beae5ec0SHong Zhang /* create msol_loc to hold mumps local solution */ 9621683a169SBarry Smith isol_loc_save = mumps->id.isol_loc; /* save it for MatSolve() */ 9631683a169SBarry Smith sol_loc_save = (PetscScalar*)mumps->id.sol_loc; 964801fbe65SHong Zhang 965a1dfcbd9SJunchao Zhang lsol_loc = mumps->id.lsol_loc; 96671aed81dSHong Zhang nlsol_loc = nrhs*lsol_loc; /* length of sol_loc */ 967a1dfcbd9SJunchao Zhang ierr = PetscMalloc2(nlsol_loc,&sol_loc,lsol_loc,&isol_loc);CHKERRQ(ierr); 968940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 969801fbe65SHong Zhang mumps->id.isol_loc = isol_loc; 970801fbe65SHong Zhang 971beae5ec0SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,nlsol_loc,(PetscScalar*)sol_loc,&msol_loc);CHKERRQ(ierr); 9722cd7d884SHong Zhang 9732b691707SHong Zhang if (!Bt) { /* dense B */ 974beae5ec0SHong Zhang /* scatter v_mpi to b_seq because MUMPS only supports centralized rhs */ 975be818407SHong Zhang /* wrap dense rhs matrix B into a vector v_mpi */ 9762b691707SHong Zhang ierr = MatGetLocalSize(B,&m,NULL);CHKERRQ(ierr); 9772b691707SHong Zhang ierr = MatDenseGetArray(B,&bray);CHKERRQ(ierr); 9782b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)B),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 9792b691707SHong Zhang ierr = MatDenseRestoreArray(B,&bray);CHKERRQ(ierr); 9802b691707SHong Zhang 981be818407SHong Zhang /* scatter v_mpi to b_seq in proc[0]. MUMPS requires rhs to be centralized on the host! */ 982801fbe65SHong Zhang if (!mumps->myid) { 983beae5ec0SHong Zhang PetscInt *idx; 984beae5ec0SHong Zhang /* idx: maps from k-th index of v_mpi to (i,j)-th global entry of B */ 985beae5ec0SHong Zhang ierr = PetscMalloc1(nrhs*M,&idx);CHKERRQ(ierr); 986be818407SHong Zhang ierr = MatGetOwnershipRanges(B,&rstart);CHKERRQ(ierr); 987be818407SHong Zhang k = 0; 9882d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 989be818407SHong Zhang for (j=0; j<nrhs; j++){ 990beae5ec0SHong Zhang for (i=rstart[proc]; i<rstart[proc+1]; i++) idx[k++] = j*M + i; 991be818407SHong Zhang } 992be818407SHong Zhang } 993be818407SHong Zhang 994334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,nrhs*M,&b_seq);CHKERRQ(ierr); 995beae5ec0SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nrhs*M,idx,PETSC_OWN_POINTER,&is_to);CHKERRQ(ierr); 996801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nrhs*M,0,1,&is_from);CHKERRQ(ierr); 997801fbe65SHong Zhang } else { 998334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&b_seq);CHKERRQ(ierr); 999801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_to);CHKERRQ(ierr); 1000801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_from);CHKERRQ(ierr); 1001801fbe65SHong Zhang } 10029448b7f1SJunchao Zhang ierr = VecScatterCreate(v_mpi,is_from,b_seq,is_to,&scat_rhs);CHKERRQ(ierr); 1003334c5f61SHong Zhang ierr = VecScatterBegin(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1004801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1005801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1006334c5f61SHong Zhang ierr = VecScatterEnd(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1007801fbe65SHong Zhang 1008801fbe65SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 1009334c5f61SHong Zhang ierr = VecGetArray(b_seq,&bray);CHKERRQ(ierr); 1010940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)bray; 1011334c5f61SHong Zhang ierr = VecRestoreArray(b_seq,&bray);CHKERRQ(ierr); 1012801fbe65SHong Zhang } 1013801fbe65SHong Zhang 10142b691707SHong Zhang } else { /* sparse B */ 10152b691707SHong Zhang b = (Mat_MPIAIJ*)Bt->data; 10162b691707SHong Zhang 1017be818407SHong Zhang /* wrap dense X into a vector v_mpi */ 10182b691707SHong Zhang ierr = MatGetLocalSize(X,&m,NULL);CHKERRQ(ierr); 10192b691707SHong Zhang ierr = MatDenseGetArray(X,&bray);CHKERRQ(ierr); 10202b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)X),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 10212b691707SHong Zhang ierr = MatDenseRestoreArray(X,&bray);CHKERRQ(ierr); 10222b691707SHong Zhang 10232b691707SHong Zhang if (!mumps->myid) { 10242b691707SHong Zhang ierr = MatSeqAIJGetArray(b->A,&aa);CHKERRQ(ierr); 1025be818407SHong Zhang ierr = MatGetRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1026c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 10272b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 10282b691707SHong Zhang mumps->id.irhs_ptr = ia; 10292b691707SHong Zhang mumps->id.irhs_sparse = ja; 10302b691707SHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 10312b691707SHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 10322b691707SHong Zhang } else { 10332b691707SHong Zhang mumps->id.irhs_ptr = NULL; 10342b691707SHong Zhang mumps->id.irhs_sparse = NULL; 10352b691707SHong Zhang mumps->id.nz_rhs = 0; 10362b691707SHong Zhang mumps->id.rhs_sparse = NULL; 10372b691707SHong Zhang } 10382b691707SHong Zhang } 10392b691707SHong Zhang 1040801fbe65SHong Zhang /* solve phase */ 1041801fbe65SHong Zhang /*-------------*/ 1042801fbe65SHong Zhang mumps->id.job = JOB_SOLVE; 10433ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1044801fbe65SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 1045801fbe65SHong Zhang 1046334c5f61SHong Zhang /* scatter mumps distributed solution to petsc vector v_mpi, which shares local arrays with solution matrix X */ 104774f0fcc7SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 104874f0fcc7SHong Zhang ierr = VecPlaceArray(v_mpi,array);CHKERRQ(ierr); 1049801fbe65SHong Zhang 1050334c5f61SHong Zhang /* create scatter scat_sol */ 1051be818407SHong Zhang ierr = MatGetOwnershipRanges(X,&rstart);CHKERRQ(ierr); 1052beae5ec0SHong Zhang /* iidx: index for scatter mumps solution to petsc X */ 1053beae5ec0SHong Zhang 1054beae5ec0SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nlsol_loc,0,1,&is_from);CHKERRQ(ierr); 1055beae5ec0SHong Zhang ierr = PetscMalloc1(nlsol_loc,&idxx);CHKERRQ(ierr); 1056beae5ec0SHong Zhang for (i=0; i<lsol_loc; i++) { 1057beae5ec0SHong Zhang isol_loc[i] -= 1; /* change Fortran style to C style. isol_loc[i+j*lsol_loc] contains x[isol_loc[i]] in j-th vector */ 1058beae5ec0SHong Zhang 10592d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 1060beae5ec0SHong Zhang if (isol_loc[i] >= rstart[proc] && isol_loc[i] < rstart[proc+1]) { 1061beae5ec0SHong Zhang myrstart = rstart[proc]; 1062beae5ec0SHong Zhang k = isol_loc[i] - myrstart; /* local index on 1st column of petsc vector X */ 1063beae5ec0SHong Zhang iidx = k + myrstart*nrhs; /* maps mumps isol_loc[i] to petsc index in X */ 1064beae5ec0SHong Zhang m = rstart[proc+1] - rstart[proc]; /* rows of X for this proc */ 1065beae5ec0SHong Zhang break; 1066be818407SHong Zhang } 1067be818407SHong Zhang } 1068be818407SHong Zhang 1069beae5ec0SHong Zhang for (j=0; j<nrhs; j++) idxx[i+j*lsol_loc] = iidx + j*m; 1070801fbe65SHong Zhang } 1071be818407SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nlsol_loc,idxx,PETSC_COPY_VALUES,&is_to);CHKERRQ(ierr); 1072beae5ec0SHong Zhang ierr = VecScatterCreate(msol_loc,is_from,v_mpi,is_to,&scat_sol);CHKERRQ(ierr); 1073beae5ec0SHong Zhang ierr = VecScatterBegin(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1074801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1075801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1076beae5ec0SHong Zhang ierr = VecScatterEnd(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1077801fbe65SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 107871aed81dSHong Zhang 107971aed81dSHong Zhang /* free spaces */ 10801683a169SBarry Smith mumps->id.sol_loc = (MumpsScalar*)sol_loc_save; 108171aed81dSHong Zhang mumps->id.isol_loc = isol_loc_save; 108271aed81dSHong Zhang 108371aed81dSHong Zhang ierr = PetscFree2(sol_loc,isol_loc);CHKERRQ(ierr); 1084801fbe65SHong Zhang ierr = PetscFree(idxx);CHKERRQ(ierr); 1085beae5ec0SHong Zhang ierr = VecDestroy(&msol_loc);CHKERRQ(ierr); 108674f0fcc7SHong Zhang ierr = VecDestroy(&v_mpi);CHKERRQ(ierr); 10872b691707SHong Zhang if (Bt) { 10882b691707SHong Zhang if (!mumps->myid) { 1089d56c302dSHong Zhang b = (Mat_MPIAIJ*)Bt->data; 10902b691707SHong Zhang ierr = MatSeqAIJRestoreArray(b->A,&aa);CHKERRQ(ierr); 1091be818407SHong Zhang ierr = MatRestoreRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1092c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 10932b691707SHong Zhang } 10942b691707SHong Zhang } else { 1095334c5f61SHong Zhang ierr = VecDestroy(&b_seq);CHKERRQ(ierr); 1096334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_rhs);CHKERRQ(ierr); 10972b691707SHong Zhang } 1098334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_sol);CHKERRQ(ierr); 10999880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*nrhs*mumps->id.RINFO(3));CHKERRQ(ierr); 1100e0b74bf9SHong Zhang PetscFunctionReturn(0); 1101e0b74bf9SHong Zhang } 1102e0b74bf9SHong Zhang 1103eb3ef3b2SHong Zhang PetscErrorCode MatMatTransposeSolve_MUMPS(Mat A,Mat Bt,Mat X) 1104eb3ef3b2SHong Zhang { 1105eb3ef3b2SHong Zhang PetscErrorCode ierr; 1106eb3ef3b2SHong Zhang PetscBool flg; 1107eb3ef3b2SHong Zhang Mat B; 1108eb3ef3b2SHong Zhang 1109eb3ef3b2SHong Zhang PetscFunctionBegin; 1110eb3ef3b2SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)Bt,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 1111eb3ef3b2SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)Bt),PETSC_ERR_ARG_WRONG,"Matrix Bt must be MATAIJ matrix"); 1112eb3ef3b2SHong Zhang 1113eb3ef3b2SHong Zhang /* Create B=Bt^T that uses Bt's data structure */ 1114eb3ef3b2SHong Zhang ierr = MatCreateTranspose(Bt,&B);CHKERRQ(ierr); 1115eb3ef3b2SHong Zhang 11160e6b8875SHong Zhang ierr = MatMatSolve_MUMPS(A,B,X);CHKERRQ(ierr); 1117eb3ef3b2SHong Zhang ierr = MatDestroy(&B);CHKERRQ(ierr); 1118eb3ef3b2SHong Zhang PetscFunctionReturn(0); 1119eb3ef3b2SHong Zhang } 1120eb3ef3b2SHong Zhang 1121ace3df97SHong Zhang #if !defined(PETSC_USE_COMPLEX) 1122a58c3f20SHong Zhang /* 1123a58c3f20SHong Zhang input: 1124a58c3f20SHong Zhang F: numeric factor 1125a58c3f20SHong Zhang output: 1126a58c3f20SHong Zhang nneg: total number of negative pivots 112719d49a3bSHong Zhang nzero: total number of zero pivots 112819d49a3bSHong Zhang npos: (global dimension of F) - nneg - nzero 1129a58c3f20SHong Zhang */ 1130dfbe8321SBarry Smith PetscErrorCode MatGetInertia_SBAIJMUMPS(Mat F,int *nneg,int *nzero,int *npos) 1131a58c3f20SHong Zhang { 1132e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1133dfbe8321SBarry Smith PetscErrorCode ierr; 1134c1490034SHong Zhang PetscMPIInt size; 1135a58c3f20SHong Zhang 1136a58c3f20SHong Zhang PetscFunctionBegin; 1137ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)F),&size);CHKERRQ(ierr); 1138bcb30aebSHong Zhang /* MUMPS 4.3.1 calls ScaLAPACK when ICNTL(13)=0 (default), which does not offer the possibility to compute the inertia of a dense matrix. Set ICNTL(13)=1 to skip ScaLAPACK */ 1139a5e57a09SHong Zhang if (size > 1 && mumps->id.ICNTL(13) != 1) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"ICNTL(13)=%d. -mat_mumps_icntl_13 must be set as 1 for correct global matrix inertia\n",mumps->id.INFOG(13)); 1140ed85ac9fSHong Zhang 1141710ac8efSHong Zhang if (nneg) *nneg = mumps->id.INFOG(12); 1142ed85ac9fSHong Zhang if (nzero || npos) { 1143ed85ac9fSHong Zhang if (mumps->id.ICNTL(24) != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"-mat_mumps_icntl_24 must be set as 1 for null pivot row detection"); 1144710ac8efSHong Zhang if (nzero) *nzero = mumps->id.INFOG(28); 1145710ac8efSHong Zhang if (npos) *npos = F->rmap->N - (mumps->id.INFOG(12) + mumps->id.INFOG(28)); 1146a58c3f20SHong Zhang } 1147a58c3f20SHong Zhang PetscFunctionReturn(0); 1148a58c3f20SHong Zhang } 114919d49a3bSHong Zhang #endif 1150a58c3f20SHong Zhang 11513ab56b82SJunchao Zhang PetscErrorCode MatMumpsGatherNonzerosOnMaster(MatReuse reuse,Mat_MUMPS *mumps) 11523ab56b82SJunchao Zhang { 11533ab56b82SJunchao Zhang PetscErrorCode ierr; 11546ac9f4daSSatish Balay PetscInt i,nz=0,*irn,*jcn=0; 11556ac9f4daSSatish Balay PetscScalar *val=0; 11563ab56b82SJunchao Zhang PetscMPIInt mpinz,*recvcount=NULL,*displs=NULL; 11573ab56b82SJunchao Zhang 11583ab56b82SJunchao Zhang PetscFunctionBegin; 11593ab56b82SJunchao Zhang if (mumps->omp_comm_size > 1) { 11603ab56b82SJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { 11613ab56b82SJunchao Zhang /* master first gathers counts of nonzeros to receive */ 11623ab56b82SJunchao Zhang if (mumps->is_omp_master) { ierr = PetscMalloc2(mumps->omp_comm_size,&recvcount,mumps->omp_comm_size,&displs);CHKERRQ(ierr); } 11633ab56b82SJunchao Zhang ierr = PetscMPIIntCast(mumps->nz,&mpinz);CHKERRQ(ierr); 11643ab56b82SJunchao Zhang ierr = MPI_Gather(&mpinz,1,MPI_INT,recvcount,1,MPI_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11653ab56b82SJunchao Zhang 11663ab56b82SJunchao Zhang /* master allocates memory to receive nonzeros */ 11673ab56b82SJunchao Zhang if (mumps->is_omp_master) { 11683ab56b82SJunchao Zhang displs[0] = 0; 11693ab56b82SJunchao Zhang for (i=1; i<mumps->omp_comm_size; i++) displs[i] = displs[i-1] + recvcount[i-1]; 11703ab56b82SJunchao Zhang nz = displs[mumps->omp_comm_size-1] + recvcount[mumps->omp_comm_size-1]; 11713ab56b82SJunchao Zhang ierr = PetscMalloc(2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar),&irn);CHKERRQ(ierr); 11723ab56b82SJunchao Zhang jcn = irn + nz; 11733ab56b82SJunchao Zhang val = (PetscScalar*)(jcn + nz); 11743ab56b82SJunchao Zhang } 11753ab56b82SJunchao Zhang 11763ab56b82SJunchao Zhang /* save the gatherv plan */ 11773ab56b82SJunchao Zhang mumps->mpinz = mpinz; /* used as send count */ 11783ab56b82SJunchao Zhang mumps->recvcount = recvcount; 11793ab56b82SJunchao Zhang mumps->displs = displs; 11803ab56b82SJunchao Zhang 11813ab56b82SJunchao Zhang /* master gathers nonzeros */ 11823ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->irn,mpinz,MPIU_INT,irn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11833ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->jcn,mpinz,MPIU_INT,jcn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11843ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->val,mpinz,MPIU_SCALAR,val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11853ab56b82SJunchao Zhang 11863ab56b82SJunchao Zhang /* master frees its row/col/val and replaces them with bigger arrays */ 11873ab56b82SJunchao Zhang if (mumps->is_omp_master) { 11883ab56b82SJunchao Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); /* irn/jcn/val are allocated together so free only irn */ 11893ab56b82SJunchao Zhang mumps->nz = nz; /* it is a sum of mpinz over omp_comm */ 11903ab56b82SJunchao Zhang mumps->irn = irn; 11913ab56b82SJunchao Zhang mumps->jcn = jcn; 11923ab56b82SJunchao Zhang mumps->val = val; 11933ab56b82SJunchao Zhang } 11943ab56b82SJunchao Zhang } else { 11953ab56b82SJunchao Zhang ierr = MPI_Gatherv((mumps->is_omp_master?MPI_IN_PLACE:mumps->val),mumps->mpinz,MPIU_SCALAR,mumps->val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11963ab56b82SJunchao Zhang } 11973ab56b82SJunchao Zhang } 11983ab56b82SJunchao Zhang PetscFunctionReturn(0); 11993ab56b82SJunchao Zhang } 12003ab56b82SJunchao Zhang 12010481f469SBarry Smith PetscErrorCode MatFactorNumeric_MUMPS(Mat F,Mat A,const MatFactorInfo *info) 1202af281ebdSHong Zhang { 1203e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)(F)->data; 12046849ba73SBarry Smith PetscErrorCode ierr; 1205ace3abfcSBarry Smith PetscBool isMPIAIJ; 1206397b6df1SKris Buschelman 1207397b6df1SKris Buschelman PetscFunctionBegin; 12086baea169SHong Zhang if (mumps->id.INFOG(1) < 0) { 12092aca8efcSHong Zhang if (mumps->id.INFOG(1) == -6) { 12102aca8efcSHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called with singular matrix structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 12116baea169SHong Zhang } 12126baea169SHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called after analysis phase fails, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 12132aca8efcSHong Zhang PetscFunctionReturn(0); 12142aca8efcSHong Zhang } 12156baea169SHong Zhang 1216a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_REUSE_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 12173ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_REUSE_MATRIX,mumps);CHKERRQ(ierr); 1218397b6df1SKris Buschelman 1219397b6df1SKris Buschelman /* numerical factorization phase */ 1220329ec9b3SHong Zhang /*-------------------------------*/ 1221a5e57a09SHong Zhang mumps->id.job = JOB_FACTNUMERIC; 12224e34a73bSHong Zhang if (!mumps->id.ICNTL(18)) { /* A is centralized */ 1223a5e57a09SHong Zhang if (!mumps->myid) { 1224940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 1225397b6df1SKris Buschelman } 1226397b6df1SKris Buschelman } else { 1227940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 1228397b6df1SKris Buschelman } 12293ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1230a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) { 1231c0d63f2fSHong Zhang if (A->erroriffailure) { 1232c0d63f2fSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 1233151787a6SHong Zhang } else { 1234c0d63f2fSHong Zhang if (mumps->id.INFOG(1) == -10) { /* numerically singular matrix */ 12352aca8efcSHong Zhang ierr = PetscInfo2(F,"matrix is numerically singular, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1236603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 1237c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -13) { 1238c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, cannot allocate required memory %d megabytes\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1239603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 1240c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -8 || mumps->id.INFOG(1) == -9 || (-16 < mumps->id.INFOG(1) && mumps->id.INFOG(1) < -10) ) { 1241c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d, problem with workarray \n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1242603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 12432aca8efcSHong Zhang } else { 1244c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1245603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 1246151787a6SHong Zhang } 12472aca8efcSHong Zhang } 1248397b6df1SKris Buschelman } 1249a5e57a09SHong Zhang if (!mumps->myid && mumps->id.ICNTL(16) > 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB," mumps->id.ICNTL(16):=%d\n",mumps->id.INFOG(16)); 1250397b6df1SKris Buschelman 1251b3cb21ddSStefano Zampini F->assembled = PETSC_TRUE; 1252a5e57a09SHong Zhang mumps->matstruc = SAME_NONZERO_PATTERN; 1253b3cb21ddSStefano Zampini if (F->schur) { /* reset Schur status to unfactored */ 1254b3cb21ddSStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 1255b3cb21ddSStefano Zampini mumps->id.ICNTL(19) = 2; 1256b3cb21ddSStefano Zampini ierr = MatTranspose(F->schur,MAT_INPLACE_MATRIX,&F->schur);CHKERRQ(ierr); 1257b3cb21ddSStefano Zampini } 1258b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,NULL,MAT_FACTOR_SCHUR_UNFACTORED);CHKERRQ(ierr); 1259b3cb21ddSStefano Zampini } 126067877ebaSShri Abhyankar 1261066565c5SStefano Zampini /* just to be sure that ICNTL(19) value returned by a call from MatMumpsGetIcntl is always consistent */ 1262066565c5SStefano Zampini if (!mumps->sym && mumps->id.ICNTL(19) && mumps->id.ICNTL(19) != 1) mumps->id.ICNTL(19) = 3; 1263066565c5SStefano Zampini 12643ab56b82SJunchao Zhang if (!mumps->is_omp_master) mumps->id.INFO(23) = 0; 12652d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 126667877ebaSShri Abhyankar PetscInt lsol_loc; 126767877ebaSShri Abhyankar PetscScalar *sol_loc; 12682205254eSKarl Rupp 1269c2093ab7SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&isMPIAIJ);CHKERRQ(ierr); 1270c2093ab7SHong Zhang 1271c2093ab7SHong Zhang /* distributed solution; Create x_seq=sol_loc for repeated use */ 1272c2093ab7SHong Zhang if (mumps->x_seq) { 1273c2093ab7SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 1274c2093ab7SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 1275c2093ab7SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 1276c2093ab7SHong Zhang } 1277a5e57a09SHong Zhang lsol_loc = mumps->id.INFO(23); /* length of sol_loc */ 1278dcca6d9dSJed Brown ierr = PetscMalloc2(lsol_loc,&sol_loc,lsol_loc,&mumps->id.isol_loc);CHKERRQ(ierr); 1279a5e57a09SHong Zhang mumps->id.lsol_loc = lsol_loc; 1280940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 1281a5e57a09SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,lsol_loc,sol_loc,&mumps->x_seq);CHKERRQ(ierr); 128267877ebaSShri Abhyankar } 12839880c9b4SStefano Zampini ierr = PetscLogFlops(mumps->id.RINFO(2));CHKERRQ(ierr); 1284397b6df1SKris Buschelman PetscFunctionReturn(0); 1285397b6df1SKris Buschelman } 1286397b6df1SKris Buschelman 12879a2535b5SHong Zhang /* Sets MUMPS options from the options database */ 12889a2535b5SHong Zhang PetscErrorCode PetscSetMUMPSFromOptions(Mat F, Mat A) 1289dcd589f8SShri Abhyankar { 1290e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1291dcd589f8SShri Abhyankar PetscErrorCode ierr; 1292a0e18203SThibaut Appel PetscInt icntl,info[80],i,ninfo=80; 1293ace3abfcSBarry Smith PetscBool flg; 1294dcd589f8SShri Abhyankar 1295dcd589f8SShri Abhyankar PetscFunctionBegin; 1296ce94432eSBarry Smith ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MUMPS Options","Mat");CHKERRQ(ierr); 12979a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_1","ICNTL(1): output stream for error messages","None",mumps->id.ICNTL(1),&icntl,&flg);CHKERRQ(ierr); 12989a2535b5SHong Zhang if (flg) mumps->id.ICNTL(1) = icntl; 12999a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_2","ICNTL(2): output stream for diagnostic printing, statistics, and warning","None",mumps->id.ICNTL(2),&icntl,&flg);CHKERRQ(ierr); 13009a2535b5SHong Zhang if (flg) mumps->id.ICNTL(2) = icntl; 13019a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_3","ICNTL(3): output stream for global information, collected on the host","None",mumps->id.ICNTL(3),&icntl,&flg);CHKERRQ(ierr); 13029a2535b5SHong Zhang if (flg) mumps->id.ICNTL(3) = icntl; 1303dcd589f8SShri Abhyankar 13049a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_4","ICNTL(4): level of printing (0 to 4)","None",mumps->id.ICNTL(4),&icntl,&flg);CHKERRQ(ierr); 13059a2535b5SHong Zhang if (flg) mumps->id.ICNTL(4) = icntl; 13069a2535b5SHong Zhang if (mumps->id.ICNTL(4) || PetscLogPrintInfo) mumps->id.ICNTL(3) = 6; /* resume MUMPS default id.ICNTL(3) = 6 */ 13079a2535b5SHong Zhang 1308d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_6","ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7)","None",mumps->id.ICNTL(6),&icntl,&flg);CHKERRQ(ierr); 13099a2535b5SHong Zhang if (flg) mumps->id.ICNTL(6) = icntl; 13109a2535b5SHong Zhang 1311d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_7","ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis","None",mumps->id.ICNTL(7),&icntl,&flg);CHKERRQ(ierr); 1312dcd589f8SShri Abhyankar if (flg) { 13132d4298aeSJunchao Zhang if (icntl== 1 && mumps->petsc_size > 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"pivot order be set by the user in PERM_IN -- not supported by the PETSc/MUMPS interface\n"); 13142205254eSKarl Rupp else mumps->id.ICNTL(7) = icntl; 1315dcd589f8SShri Abhyankar } 1316e0b74bf9SHong Zhang 13170298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_8","ICNTL(8): scaling strategy (-2 to 8 or 77)","None",mumps->id.ICNTL(8),&mumps->id.ICNTL(8),NULL);CHKERRQ(ierr); 1318d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_9","ICNTL(9): computes the solution using A or A^T","None",mumps->id.ICNTL(9),&mumps->id.ICNTL(9),NULL);CHKERRQ(ierr); handled by MatSolveTranspose_MUMPS() */ 13190298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_10","ICNTL(10): max num of refinements","None",mumps->id.ICNTL(10),&mumps->id.ICNTL(10),NULL);CHKERRQ(ierr); 1320d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_11","ICNTL(11): statistics related to an error analysis (via -ksp_view)","None",mumps->id.ICNTL(11),&mumps->id.ICNTL(11),NULL);CHKERRQ(ierr); 1321d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_12","ICNTL(12): an ordering strategy for symmetric matrices (0 to 3)","None",mumps->id.ICNTL(12),&mumps->id.ICNTL(12),NULL);CHKERRQ(ierr); 1322d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_13","ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting","None",mumps->id.ICNTL(13),&mumps->id.ICNTL(13),NULL);CHKERRQ(ierr); 1323d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_14","ICNTL(14): percentage increase in the estimated working space","None",mumps->id.ICNTL(14),&mumps->id.ICNTL(14),NULL);CHKERRQ(ierr); 1324d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_19","ICNTL(19): computes the Schur complement","None",mumps->id.ICNTL(19),&mumps->id.ICNTL(19),NULL);CHKERRQ(ierr); 132559ac8732SStefano Zampini if (mumps->id.ICNTL(19) <= 0 || mumps->id.ICNTL(19) > 3) { /* reset any schur data (if any) */ 1326b3cb21ddSStefano Zampini ierr = MatDestroy(&F->schur);CHKERRQ(ierr); 132759ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 132859ac8732SStefano Zampini } 13294e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_20","ICNTL(20): the format (dense or sparse) of the right-hand sides","None",mumps->id.ICNTL(20),&mumps->id.ICNTL(20),NULL);CHKERRQ(ierr); -- sparse rhs is not supported in PETSc API */ 1330d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_21","ICNTL(21): the distribution (centralized or distributed) of the solution vectors","None",mumps->id.ICNTL(21),&mumps->id.ICNTL(21),NULL);CHKERRQ(ierr); we only use distributed solution vector */ 13319a2535b5SHong Zhang 1332d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_22","ICNTL(22): in-core/out-of-core factorization and solve (0 or 1)","None",mumps->id.ICNTL(22),&mumps->id.ICNTL(22),NULL);CHKERRQ(ierr); 13330298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_23","ICNTL(23): max size of the working memory (MB) that can allocate per processor","None",mumps->id.ICNTL(23),&mumps->id.ICNTL(23),NULL);CHKERRQ(ierr); 13340298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_24","ICNTL(24): detection of null pivot rows (0 or 1)","None",mumps->id.ICNTL(24),&mumps->id.ICNTL(24),NULL);CHKERRQ(ierr); 13359a2535b5SHong Zhang if (mumps->id.ICNTL(24)) { 13369a2535b5SHong Zhang mumps->id.ICNTL(13) = 1; /* turn-off ScaLAPACK to help with the correct detection of null pivots */ 1337d7ebd59bSHong Zhang } 1338d7ebd59bSHong Zhang 1339b4ed93dbSHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_25","ICNTL(25): computes a solution of a deficient matrix and a null space basis","None",mumps->id.ICNTL(25),&mumps->id.ICNTL(25),NULL);CHKERRQ(ierr); 1340d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_26","ICNTL(26): drives the solution phase if a Schur complement matrix","None",mumps->id.ICNTL(26),&mumps->id.ICNTL(26),NULL);CHKERRQ(ierr); 13412cd7d884SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_27","ICNTL(27): the blocking size for multiple right-hand sides","None",mumps->id.ICNTL(27),&mumps->id.ICNTL(27),NULL);CHKERRQ(ierr); 13420298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_28","ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering","None",mumps->id.ICNTL(28),&mumps->id.ICNTL(28),NULL);CHKERRQ(ierr); 1343d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_29","ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis","None",mumps->id.ICNTL(29),&mumps->id.ICNTL(29),NULL);CHKERRQ(ierr); 134489a9c03aSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_30","ICNTL(30): compute user-specified set of entries in inv(A)","None",mumps->id.ICNTL(30),&mumps->id.ICNTL(30),NULL);CHKERRQ(ierr); */ /* call MatMumpsGetInverse() directly */ 1345d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_31","ICNTL(31): indicates which factors may be discarded during factorization","None",mumps->id.ICNTL(31),&mumps->id.ICNTL(31),NULL);CHKERRQ(ierr); 13464e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_32","ICNTL(32): performs the forward elemination of the right-hand sides during factorization","None",mumps->id.ICNTL(32),&mumps->id.ICNTL(32),NULL);CHKERRQ(ierr); -- not supported by PETSc API */ 13470298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_33","ICNTL(33): compute determinant","None",mumps->id.ICNTL(33),&mumps->id.ICNTL(33),NULL);CHKERRQ(ierr); 1348a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_35","ICNTL(35): activates Block Low Rank (BLR) based factorization","None",mumps->id.ICNTL(35),&mumps->id.ICNTL(35),NULL);CHKERRQ(ierr); 1349a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_36","ICNTL(36): choice of BLR factorization variant","None",mumps->id.ICNTL(36),&mumps->id.ICNTL(36),NULL);CHKERRQ(ierr); 1350a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_38","ICNTL(38): estimated compression rate of LU factors with BLR","None",mumps->id.ICNTL(38),&mumps->id.ICNTL(38),NULL);CHKERRQ(ierr); 1351dcd589f8SShri Abhyankar 13520298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr); 13530298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr); 13540298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr); 13550298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr); 13560298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_5","CNTL(5): fixation for null pivots","None",mumps->id.CNTL(5),&mumps->id.CNTL(5),NULL);CHKERRQ(ierr); 1357b4ed93dbSHong Zhang ierr = PetscOptionsReal("-mat_mumps_cntl_7","CNTL(7): dropping parameter used during BLR","None",mumps->id.CNTL(7),&mumps->id.CNTL(7),NULL);CHKERRQ(ierr); 1358e5bb22a1SHong Zhang 13592a808120SBarry Smith ierr = PetscOptionsString("-mat_mumps_ooc_tmpdir", "out of core directory", "None", mumps->id.ooc_tmpdir, mumps->id.ooc_tmpdir, 256, NULL);CHKERRQ(ierr); 1360b34f08ffSHong Zhang 136116d797efSHong Zhang ierr = PetscOptionsIntArray("-mat_mumps_view_info","request INFO local to each processor","",info,&ninfo,NULL);CHKERRQ(ierr); 1362b34f08ffSHong Zhang if (ninfo) { 1363a0e18203SThibaut Appel if (ninfo > 80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"number of INFO %d must <= 80\n",ninfo); 1364b34f08ffSHong Zhang ierr = PetscMalloc1(ninfo,&mumps->info);CHKERRQ(ierr); 1365b34f08ffSHong Zhang mumps->ninfo = ninfo; 1366b34f08ffSHong Zhang for (i=0; i<ninfo; i++) { 1367a0e18203SThibaut Appel if (info[i] < 0 || info[i]>80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"index of INFO %d must between 1 and 80\n",ninfo); 13682a808120SBarry Smith else mumps->info[i] = info[i]; 1369b34f08ffSHong Zhang } 1370b34f08ffSHong Zhang } 1371b34f08ffSHong Zhang 13722a808120SBarry Smith ierr = PetscOptionsEnd();CHKERRQ(ierr); 1373dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1374dcd589f8SShri Abhyankar } 1375dcd589f8SShri Abhyankar 1376f697e70eSHong Zhang PetscErrorCode PetscInitializeMUMPS(Mat A,Mat_MUMPS *mumps) 1377dcd589f8SShri Abhyankar { 1378dcd589f8SShri Abhyankar PetscErrorCode ierr; 13797c405c4aSJunchao Zhang PetscInt nthreads=0; 1380dcd589f8SShri Abhyankar 1381dcd589f8SShri Abhyankar PetscFunctionBegin; 13823ab56b82SJunchao Zhang mumps->petsc_comm = PetscObjectComm((PetscObject)A); 13833ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->petsc_comm,&mumps->petsc_size);CHKERRQ(ierr); 13843ab56b82SJunchao Zhang ierr = MPI_Comm_rank(mumps->petsc_comm,&mumps->myid);CHKERRQ(ierr); /* so that code like "if (!myid)" still works even if mumps_comm is different */ 13853ab56b82SJunchao Zhang 13867c405c4aSJunchao Zhang ierr = PetscOptionsHasName(NULL,NULL,"-mat_mumps_use_omp_threads",&mumps->use_petsc_omp_support);CHKERRQ(ierr); 13877c405c4aSJunchao Zhang if (mumps->use_petsc_omp_support) nthreads = -1; /* -1 will let PetscOmpCtrlCreate() guess a proper value when user did not supply one */ 13887c405c4aSJunchao Zhang ierr = PetscOptionsGetInt(NULL,NULL,"-mat_mumps_use_omp_threads",&nthreads,NULL);CHKERRQ(ierr); 13893ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { 13903ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 13913ab56b82SJunchao Zhang ierr = PetscOmpCtrlCreate(mumps->petsc_comm,nthreads,&mumps->omp_ctrl);CHKERRQ(ierr); 13923ab56b82SJunchao Zhang ierr = PetscOmpCtrlGetOmpComms(mumps->omp_ctrl,&mumps->omp_comm,&mumps->mumps_comm,&mumps->is_omp_master);CHKERRQ(ierr); 13933ab56b82SJunchao Zhang #else 1394217d3b1eSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP_SYS,"the system does not have PETSc OpenMP support but you added the -mat_mumps_use_omp_threads option. Configure PETSc with --with-openmp --download-hwloc (or --with-hwloc) to enable it, see more in MATSOLVERMUMPS manual\n"); 13953ab56b82SJunchao Zhang #endif 13963ab56b82SJunchao Zhang } else { 13973ab56b82SJunchao Zhang mumps->omp_comm = PETSC_COMM_SELF; 13983ab56b82SJunchao Zhang mumps->mumps_comm = mumps->petsc_comm; 13993ab56b82SJunchao Zhang mumps->is_omp_master = PETSC_TRUE; 14003ab56b82SJunchao Zhang } 14013ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->omp_comm,&mumps->omp_comm_size);CHKERRQ(ierr); 14022205254eSKarl Rupp 14032d4298aeSJunchao Zhang mumps->id.comm_fortran = MPI_Comm_c2f(mumps->mumps_comm); 1404f697e70eSHong Zhang mumps->id.job = JOB_INIT; 1405f697e70eSHong Zhang mumps->id.par = 1; /* host participates factorizaton and solve */ 1406f697e70eSHong Zhang mumps->id.sym = mumps->sym; 14073ab56b82SJunchao Zhang 14083ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 14093ab56b82SJunchao Zhang 14103ab56b82SJunchao Zhang /* copy MUMPS default control values from master to slaves. Although slaves do not call MUMPS, they may access these values in code. 14113ab56b82SJunchao Zhang For example, ICNTL(9) is initialized to 1 by MUMPS and slaves check ICNTL(9) in MatSolve_MUMPS. 14123ab56b82SJunchao Zhang */ 1413a0e18203SThibaut Appel ierr = MPI_Bcast(mumps->id.icntl,60,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 Manual Section 9 */ 14143ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.cntl, 15,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 1415f697e70eSHong Zhang 14160298fd71SBarry Smith mumps->scat_rhs = NULL; 14170298fd71SBarry Smith mumps->scat_sol = NULL; 14189a2535b5SHong Zhang 141970544d5fSHong Zhang /* set PETSc-MUMPS default options - override MUMPS default */ 14209a2535b5SHong Zhang mumps->id.ICNTL(3) = 0; 14219a2535b5SHong Zhang mumps->id.ICNTL(4) = 0; 14222d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 14239a2535b5SHong Zhang mumps->id.ICNTL(18) = 0; /* centralized assembled matrix input */ 14249a2535b5SHong Zhang } else { 14259a2535b5SHong Zhang mumps->id.ICNTL(18) = 3; /* distributed assembled matrix input */ 14264e34a73bSHong Zhang mumps->id.ICNTL(20) = 0; /* rhs is in dense format */ 142770544d5fSHong Zhang mumps->id.ICNTL(21) = 1; /* distributed solution */ 14289a2535b5SHong Zhang } 14296444a565SStefano Zampini 14306444a565SStefano Zampini /* schur */ 14316444a565SStefano Zampini mumps->id.size_schur = 0; 14326444a565SStefano Zampini mumps->id.listvar_schur = NULL; 14336444a565SStefano Zampini mumps->id.schur = NULL; 1434b5fa320bSStefano Zampini mumps->sizeredrhs = 0; 143559ac8732SStefano Zampini mumps->schur_sol = NULL; 143659ac8732SStefano Zampini mumps->schur_sizesol = 0; 1437dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1438dcd589f8SShri Abhyankar } 1439dcd589f8SShri Abhyankar 14409a625307SHong Zhang PetscErrorCode MatFactorSymbolic_MUMPS_ReportIfError(Mat F,Mat A,const MatFactorInfo *info,Mat_MUMPS *mumps) 14415cd7cf9dSHong Zhang { 14425cd7cf9dSHong Zhang PetscErrorCode ierr; 14435cd7cf9dSHong Zhang 14445cd7cf9dSHong Zhang PetscFunctionBegin; 1445a0e18203SThibaut Appel ierr = MPI_Bcast(mumps->id.infog, 80,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 manual p82 */ 14463ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.rinfog,20,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 14475cd7cf9dSHong Zhang if (mumps->id.INFOG(1) < 0) { 14485cd7cf9dSHong Zhang if (A->erroriffailure) { 14495cd7cf9dSHong Zhang SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in analysis phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 14505cd7cf9dSHong Zhang } else { 14515cd7cf9dSHong Zhang if (mumps->id.INFOG(1) == -6) { 14525cd7cf9dSHong Zhang ierr = PetscInfo2(F,"matrix is singular in structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1453603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_STRUCT_ZEROPIVOT; 14545cd7cf9dSHong Zhang } else if (mumps->id.INFOG(1) == -5 || mumps->id.INFOG(1) == -7) { 14555cd7cf9dSHong Zhang ierr = PetscInfo2(F,"problem of workspace, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1456603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 14575cd7cf9dSHong Zhang } else { 14585cd7cf9dSHong Zhang ierr = PetscInfo2(F,"Error reported by MUMPS in analysis phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1459603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 14605cd7cf9dSHong Zhang } 14615cd7cf9dSHong Zhang } 14625cd7cf9dSHong Zhang } 14635cd7cf9dSHong Zhang PetscFunctionReturn(0); 14645cd7cf9dSHong Zhang } 14655cd7cf9dSHong Zhang 1466a5e57a09SHong Zhang /* Note Petsc r(=c) permutation is used when mumps->id.ICNTL(7)==1 with centralized assembled matrix input; otherwise r and c are ignored */ 14670481f469SBarry Smith PetscErrorCode MatLUFactorSymbolic_AIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1468b24902e0SBarry Smith { 1469e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1470dcd589f8SShri Abhyankar PetscErrorCode ierr; 147167877ebaSShri Abhyankar Vec b; 147267877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1473397b6df1SKris Buschelman 1474397b6df1SKris Buschelman PetscFunctionBegin; 1475a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1476dcd589f8SShri Abhyankar 14779a2535b5SHong Zhang /* Set MUMPS options from the options database */ 14789a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1479dcd589f8SShri Abhyankar 1480a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 14813ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1482dcd589f8SShri Abhyankar 148367877ebaSShri Abhyankar /* analysis phase */ 148467877ebaSShri Abhyankar /*----------------*/ 1485a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1486a5e57a09SHong Zhang mumps->id.n = M; 1487a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 148867877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1489a5e57a09SHong Zhang if (!mumps->myid) { 1490a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1491a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1492940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 149367877ebaSShri Abhyankar } 1494a5e57a09SHong Zhang if (mumps->id.ICNTL(7) == 1) { /* use user-provide matrix ordering - assuming r = c ordering */ 14955248a706SHong Zhang /* 14965248a706SHong Zhang PetscBool flag; 14975248a706SHong Zhang ierr = ISEqual(r,c,&flag);CHKERRQ(ierr); 14985248a706SHong Zhang if (!flag) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"row_perm != col_perm"); 14995248a706SHong Zhang ierr = ISView(r,PETSC_VIEWER_STDOUT_SELF); 15005248a706SHong Zhang */ 1501a5e57a09SHong Zhang if (!mumps->myid) { 1502e0b74bf9SHong Zhang const PetscInt *idx; 1503e0b74bf9SHong Zhang PetscInt i,*perm_in; 15042205254eSKarl Rupp 1505785e854fSJed Brown ierr = PetscMalloc1(M,&perm_in);CHKERRQ(ierr); 1506e0b74bf9SHong Zhang ierr = ISGetIndices(r,&idx);CHKERRQ(ierr); 15072205254eSKarl Rupp 1508a5e57a09SHong Zhang mumps->id.perm_in = perm_in; 1509e0b74bf9SHong Zhang for (i=0; i<M; i++) perm_in[i] = idx[i]+1; /* perm_in[]: start from 1, not 0! */ 1510e0b74bf9SHong Zhang ierr = ISRestoreIndices(r,&idx);CHKERRQ(ierr); 1511e0b74bf9SHong Zhang } 1512e0b74bf9SHong Zhang } 151367877ebaSShri Abhyankar } 151467877ebaSShri Abhyankar break; 151567877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1516a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1517a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1518a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1519940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 152067877ebaSShri Abhyankar } 152167877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 15222a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 1523*94b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 15246bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 152567877ebaSShri Abhyankar break; 152667877ebaSShri Abhyankar } 15273ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 15285cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 152967877ebaSShri Abhyankar 1530719d5645SBarry Smith F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1531dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 153251d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 15334e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 1534eb3ef3b2SHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 1535b24902e0SBarry Smith PetscFunctionReturn(0); 1536b24902e0SBarry Smith } 1537b24902e0SBarry Smith 1538450b117fSShri Abhyankar /* Note the Petsc r and c permutations are ignored */ 1539450b117fSShri Abhyankar PetscErrorCode MatLUFactorSymbolic_BAIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1540450b117fSShri Abhyankar { 1541e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1542dcd589f8SShri Abhyankar PetscErrorCode ierr; 154367877ebaSShri Abhyankar Vec b; 154467877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1545450b117fSShri Abhyankar 1546450b117fSShri Abhyankar PetscFunctionBegin; 1547a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1548dcd589f8SShri Abhyankar 15499a2535b5SHong Zhang /* Set MUMPS options from the options database */ 15509a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1551dcd589f8SShri Abhyankar 1552a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 15533ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 155467877ebaSShri Abhyankar 155567877ebaSShri Abhyankar /* analysis phase */ 155667877ebaSShri Abhyankar /*----------------*/ 1557a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1558a5e57a09SHong Zhang mumps->id.n = M; 1559a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 156067877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1561a5e57a09SHong Zhang if (!mumps->myid) { 1562a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1563a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1564940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 156567877ebaSShri Abhyankar } 156667877ebaSShri Abhyankar } 156767877ebaSShri Abhyankar break; 156867877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1569a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1570a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1571a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1572940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 157367877ebaSShri Abhyankar } 157467877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 15752a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 1576*94b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 15776bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 157867877ebaSShri Abhyankar break; 157967877ebaSShri Abhyankar } 15803ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 15815cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 158267877ebaSShri Abhyankar 1583450b117fSShri Abhyankar F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1584dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 158551d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 1586450b117fSShri Abhyankar PetscFunctionReturn(0); 1587450b117fSShri Abhyankar } 1588b24902e0SBarry Smith 1589141f4205SHong Zhang /* Note the Petsc r permutation and factor info are ignored */ 159067877ebaSShri Abhyankar PetscErrorCode MatCholeskyFactorSymbolic_MUMPS(Mat F,Mat A,IS r,const MatFactorInfo *info) 1591b24902e0SBarry Smith { 1592e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1593dcd589f8SShri Abhyankar PetscErrorCode ierr; 159467877ebaSShri Abhyankar Vec b; 159567877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1596397b6df1SKris Buschelman 1597397b6df1SKris Buschelman PetscFunctionBegin; 1598a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1599dcd589f8SShri Abhyankar 16009a2535b5SHong Zhang /* Set MUMPS options from the options database */ 16019a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1602dcd589f8SShri Abhyankar 1603a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 16043ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1605dcd589f8SShri Abhyankar 160667877ebaSShri Abhyankar /* analysis phase */ 160767877ebaSShri Abhyankar /*----------------*/ 1608a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1609a5e57a09SHong Zhang mumps->id.n = M; 1610a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 161167877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1612a5e57a09SHong Zhang if (!mumps->myid) { 1613a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1614a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1615940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 161667877ebaSShri Abhyankar } 161767877ebaSShri Abhyankar } 161867877ebaSShri Abhyankar break; 161967877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1620a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1621a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1622a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1623940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 162467877ebaSShri Abhyankar } 162567877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 16262a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 1627*94b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 16286bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 162967877ebaSShri Abhyankar break; 163067877ebaSShri Abhyankar } 16313ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 16325cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 16335cd7cf9dSHong Zhang 16342792810eSHong Zhang F->ops->choleskyfactornumeric = MatFactorNumeric_MUMPS; 1635dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 163651d5961aSHong Zhang F->ops->solvetranspose = MatSolve_MUMPS; 16374e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 163823a5080aSHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 16394e34a73bSHong Zhang #if defined(PETSC_USE_COMPLEX) 16400298fd71SBarry Smith F->ops->getinertia = NULL; 16414e34a73bSHong Zhang #else 16424e34a73bSHong Zhang F->ops->getinertia = MatGetInertia_SBAIJMUMPS; 1643db4efbfdSBarry Smith #endif 1644b24902e0SBarry Smith PetscFunctionReturn(0); 1645b24902e0SBarry Smith } 1646b24902e0SBarry Smith 164764e6c443SBarry Smith PetscErrorCode MatView_MUMPS(Mat A,PetscViewer viewer) 164874ed9c26SBarry Smith { 1649f6c57405SHong Zhang PetscErrorCode ierr; 165064e6c443SBarry Smith PetscBool iascii; 165164e6c443SBarry Smith PetscViewerFormat format; 1652e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 1653f6c57405SHong Zhang 1654f6c57405SHong Zhang PetscFunctionBegin; 165564e6c443SBarry Smith /* check if matrix is mumps type */ 165664e6c443SBarry Smith if (A->ops->solve != MatSolve_MUMPS) PetscFunctionReturn(0); 165764e6c443SBarry Smith 1658251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 165964e6c443SBarry Smith if (iascii) { 166064e6c443SBarry Smith ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 166164e6c443SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO) { 166264e6c443SBarry Smith ierr = PetscViewerASCIIPrintf(viewer,"MUMPS run parameters:\n");CHKERRQ(ierr); 1663a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," SYM (matrix type): %d \n",mumps->id.sym);CHKERRQ(ierr); 1664a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," PAR (host participation): %d \n",mumps->id.par);CHKERRQ(ierr); 1665a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(1) (output for error): %d \n",mumps->id.ICNTL(1));CHKERRQ(ierr); 1666a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(2) (output of diagnostic msg): %d \n",mumps->id.ICNTL(2));CHKERRQ(ierr); 1667a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(3) (output for global info): %d \n",mumps->id.ICNTL(3));CHKERRQ(ierr); 1668a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(4) (level of printing): %d \n",mumps->id.ICNTL(4));CHKERRQ(ierr); 1669a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(5) (input mat struct): %d \n",mumps->id.ICNTL(5));CHKERRQ(ierr); 1670a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(6) (matrix prescaling): %d \n",mumps->id.ICNTL(6));CHKERRQ(ierr); 1671d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(7) (sequential matrix ordering):%d \n",mumps->id.ICNTL(7));CHKERRQ(ierr); 1672d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(8) (scaling strategy): %d \n",mumps->id.ICNTL(8));CHKERRQ(ierr); 1673a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(10) (max num of refinements): %d \n",mumps->id.ICNTL(10));CHKERRQ(ierr); 1674a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(11) (error analysis): %d \n",mumps->id.ICNTL(11));CHKERRQ(ierr); 1675a5e57a09SHong Zhang if (mumps->id.ICNTL(11)>0) { 1676a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(4) (inf norm of input mat): %g\n",mumps->id.RINFOG(4));CHKERRQ(ierr); 1677a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(5) (inf norm of solution): %g\n",mumps->id.RINFOG(5));CHKERRQ(ierr); 1678a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(6) (inf norm of residual): %g\n",mumps->id.RINFOG(6));CHKERRQ(ierr); 1679a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(7),RINFOG(8) (backward error est): %g, %g\n",mumps->id.RINFOG(7),mumps->id.RINFOG(8));CHKERRQ(ierr); 1680a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(9) (error estimate): %g \n",mumps->id.RINFOG(9));CHKERRQ(ierr); 1681a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(10),RINFOG(11)(condition numbers): %g, %g\n",mumps->id.RINFOG(10),mumps->id.RINFOG(11));CHKERRQ(ierr); 1682f6c57405SHong Zhang } 1683a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(12) (efficiency control): %d \n",mumps->id.ICNTL(12));CHKERRQ(ierr); 1684a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(13) (efficiency control): %d \n",mumps->id.ICNTL(13));CHKERRQ(ierr); 1685a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(14) (percentage of estimated workspace increase): %d \n",mumps->id.ICNTL(14));CHKERRQ(ierr); 1686f6c57405SHong Zhang /* ICNTL(15-17) not used */ 1687a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(18) (input mat struct): %d \n",mumps->id.ICNTL(18));CHKERRQ(ierr); 1688d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(19) (Schur complement info): %d \n",mumps->id.ICNTL(19));CHKERRQ(ierr); 1689a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(20) (rhs sparse pattern): %d \n",mumps->id.ICNTL(20));CHKERRQ(ierr); 1690ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," ICNTL(21) (solution struct): %d \n",mumps->id.ICNTL(21));CHKERRQ(ierr); 1691a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(22) (in-core/out-of-core facility): %d \n",mumps->id.ICNTL(22));CHKERRQ(ierr); 1692a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(23) (max size of memory can be allocated locally):%d \n",mumps->id.ICNTL(23));CHKERRQ(ierr); 1693c0165424SHong Zhang 1694a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(24) (detection of null pivot rows): %d \n",mumps->id.ICNTL(24));CHKERRQ(ierr); 1695a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(25) (computation of a null space basis): %d \n",mumps->id.ICNTL(25));CHKERRQ(ierr); 1696a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(26) (Schur options for rhs or solution): %d \n",mumps->id.ICNTL(26));CHKERRQ(ierr); 1697a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(27) (experimental parameter): %d \n",mumps->id.ICNTL(27));CHKERRQ(ierr); 1698a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(28) (use parallel or sequential ordering): %d \n",mumps->id.ICNTL(28));CHKERRQ(ierr); 1699a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(29) (parallel ordering): %d \n",mumps->id.ICNTL(29));CHKERRQ(ierr); 170042179a6aSHong Zhang 1701a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(30) (user-specified set of entries in inv(A)): %d \n",mumps->id.ICNTL(30));CHKERRQ(ierr); 1702a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(31) (factors is discarded in the solve phase): %d \n",mumps->id.ICNTL(31));CHKERRQ(ierr); 1703a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(33) (compute determinant): %d \n",mumps->id.ICNTL(33));CHKERRQ(ierr); 17046e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(35) (activate BLR based factorization): %d \n",mumps->id.ICNTL(35));CHKERRQ(ierr); 1705a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(36) (choice of BLR factorization variant): %d \n",mumps->id.ICNTL(36));CHKERRQ(ierr); 1706a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(38) (estimated compression rate of LU factors): %d \n",mumps->id.ICNTL(38));CHKERRQ(ierr); 1707f6c57405SHong Zhang 1708a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(1) (relative pivoting threshold): %g \n",mumps->id.CNTL(1));CHKERRQ(ierr); 1709a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(2) (stopping criterion of refinement): %g \n",mumps->id.CNTL(2));CHKERRQ(ierr); 1710ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(3) (absolute pivoting threshold): %g \n",mumps->id.CNTL(3));CHKERRQ(ierr); 1711ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(4) (value of static pivoting): %g \n",mumps->id.CNTL(4));CHKERRQ(ierr); 1712a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(5) (fixation for null pivots): %g \n",mumps->id.CNTL(5));CHKERRQ(ierr); 17136e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(7) (dropping parameter for BLR): %g \n",mumps->id.CNTL(7));CHKERRQ(ierr); 1714f6c57405SHong Zhang 1715f6c57405SHong Zhang /* infomation local to each processor */ 171634ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(1) (local estimated flops for the elimination after analysis): \n");CHKERRQ(ierr); 17171575c14dSBarry Smith ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr); 1718a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(1));CHKERRQ(ierr); 17192a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 172034ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(2) (local estimated flops for the assembly after factorization): \n");CHKERRQ(ierr); 1721a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(2));CHKERRQ(ierr); 17222a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 172334ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(3) (local estimated flops for the elimination after factorization): \n");CHKERRQ(ierr); 1724a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(3));CHKERRQ(ierr); 17252a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1726f6c57405SHong Zhang 172734ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(15) (estimated size of (in MB) MUMPS internal data for running numerical factorization): \n");CHKERRQ(ierr); 1728a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(15));CHKERRQ(ierr); 17292a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1730f6c57405SHong Zhang 173134ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(16) (size of (in MB) MUMPS internal data used during numerical factorization): \n");CHKERRQ(ierr); 1732a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(16));CHKERRQ(ierr); 17332a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1734f6c57405SHong Zhang 173534ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(23) (num of pivots eliminated on this processor after factorization): \n");CHKERRQ(ierr); 1736a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(23));CHKERRQ(ierr); 17372a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1738b34f08ffSHong Zhang 1739a0e18203SThibaut Appel if (mumps->ninfo && mumps->ninfo <= 80){ 1740b34f08ffSHong Zhang PetscInt i; 1741b34f08ffSHong Zhang for (i=0; i<mumps->ninfo; i++){ 1742b34f08ffSHong Zhang ierr = PetscViewerASCIIPrintf(viewer, " INFO(%d): \n",mumps->info[i]);CHKERRQ(ierr); 1743b34f08ffSHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(mumps->info[i]));CHKERRQ(ierr); 17442a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1745b34f08ffSHong Zhang } 1746b34f08ffSHong Zhang } 17471575c14dSBarry Smith ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr); 1748f6c57405SHong Zhang 1749a5e57a09SHong Zhang if (!mumps->myid) { /* information from the host */ 1750a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(1) (global estimated flops for the elimination after analysis): %g \n",mumps->id.RINFOG(1));CHKERRQ(ierr); 1751a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(2) (global estimated flops for the assembly after factorization): %g \n",mumps->id.RINFOG(2));CHKERRQ(ierr); 1752a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(3) (global estimated flops for the elimination after factorization): %g \n",mumps->id.RINFOG(3));CHKERRQ(ierr); 1753a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," (RINFOG(12) RINFOG(13))*2^INFOG(34) (determinant): (%g,%g)*(2^%d)\n",mumps->id.RINFOG(12),mumps->id.RINFOG(13),mumps->id.INFOG(34));CHKERRQ(ierr); 1754f6c57405SHong Zhang 1755a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(3) (estimated real workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(3));CHKERRQ(ierr); 1756a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(4) (estimated integer workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(4));CHKERRQ(ierr); 1757a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(5) (estimated maximum front size in the complete tree): %d \n",mumps->id.INFOG(5));CHKERRQ(ierr); 1758a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(6) (number of nodes in the complete tree): %d \n",mumps->id.INFOG(6));CHKERRQ(ierr); 1759a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(7) (ordering option effectively use after analysis): %d \n",mumps->id.INFOG(7));CHKERRQ(ierr); 1760a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(8) (structural symmetry in percent of the permuted matrix after analysis): %d \n",mumps->id.INFOG(8));CHKERRQ(ierr); 1761a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(9) (total real/complex workspace to store the matrix factors after factorization): %d \n",mumps->id.INFOG(9));CHKERRQ(ierr); 1762a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(10) (total integer space store the matrix factors after factorization): %d \n",mumps->id.INFOG(10));CHKERRQ(ierr); 1763a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(11) (order of largest frontal matrix after factorization): %d \n",mumps->id.INFOG(11));CHKERRQ(ierr); 1764a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(12) (number of off-diagonal pivots): %d \n",mumps->id.INFOG(12));CHKERRQ(ierr); 1765a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(13) (number of delayed pivots after factorization): %d \n",mumps->id.INFOG(13));CHKERRQ(ierr); 1766a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(14) (number of memory compress after factorization): %d \n",mumps->id.INFOG(14));CHKERRQ(ierr); 1767a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(15) (number of steps of iterative refinement after solution): %d \n",mumps->id.INFOG(15));CHKERRQ(ierr); 1768a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(16) (estimated size (in MB) of all MUMPS internal data for factorization after analysis: value on the most memory consuming processor): %d \n",mumps->id.INFOG(16));CHKERRQ(ierr); 1769a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(17) (estimated size of all MUMPS internal data for factorization after analysis: sum over all processors): %d \n",mumps->id.INFOG(17));CHKERRQ(ierr); 1770a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(18) (size of all MUMPS internal data allocated during factorization: value on the most memory consuming processor): %d \n",mumps->id.INFOG(18));CHKERRQ(ierr); 1771a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(19) (size of all MUMPS internal data allocated during factorization: sum over all processors): %d \n",mumps->id.INFOG(19));CHKERRQ(ierr); 1772a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(20) (estimated number of entries in the factors): %d \n",mumps->id.INFOG(20));CHKERRQ(ierr); 1773a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(21) (size in MB of memory effectively used during factorization - value on the most memory consuming processor): %d \n",mumps->id.INFOG(21));CHKERRQ(ierr); 1774a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(22) (size in MB of memory effectively used during factorization - sum over all processors): %d \n",mumps->id.INFOG(22));CHKERRQ(ierr); 1775a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(23) (after analysis: value of ICNTL(6) effectively used): %d \n",mumps->id.INFOG(23));CHKERRQ(ierr); 1776a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(24) (after analysis: value of ICNTL(12) effectively used): %d \n",mumps->id.INFOG(24));CHKERRQ(ierr); 1777a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(25) (after factorization: number of pivots modified by static pivoting): %d \n",mumps->id.INFOG(25));CHKERRQ(ierr); 177840d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(28) (after factorization: number of null pivots encountered): %d\n",mumps->id.INFOG(28));CHKERRQ(ierr); 177940d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(29) (after factorization: effective number of entries in the factors (sum over all processors)): %d\n",mumps->id.INFOG(29));CHKERRQ(ierr); 178040d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(30, 31) (after solution: size in Mbytes of memory used during solution phase): %d, %d\n",mumps->id.INFOG(30),mumps->id.INFOG(31));CHKERRQ(ierr); 178140d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(32) (after analysis: type of analysis done): %d\n",mumps->id.INFOG(32));CHKERRQ(ierr); 178240d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(33) (value used for ICNTL(8)): %d\n",mumps->id.INFOG(33));CHKERRQ(ierr); 178340d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(34) (exponent of the determinant if determinant is requested): %d\n",mumps->id.INFOG(34));CHKERRQ(ierr); 1784a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(35) (after factorization: number of entries taking into account BLR factor compression - sum over all processors): %d\n",mumps->id.INFOG(35));CHKERRQ(ierr); 1785a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(36) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(36));CHKERRQ(ierr); 1786a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(37) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - sum over all processors): %d \n",mumps->id.INFOG(37));CHKERRQ(ierr); 1787a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(38) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(38));CHKERRQ(ierr); 1788a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(39) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - sum over all processors): %d \n",mumps->id.INFOG(39));CHKERRQ(ierr); 1789f6c57405SHong Zhang } 1790f6c57405SHong Zhang } 1791cb828f0fSHong Zhang } 1792f6c57405SHong Zhang PetscFunctionReturn(0); 1793f6c57405SHong Zhang } 1794f6c57405SHong Zhang 179535bd34faSBarry Smith PetscErrorCode MatGetInfo_MUMPS(Mat A,MatInfoType flag,MatInfo *info) 179635bd34faSBarry Smith { 1797e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)A->data; 179835bd34faSBarry Smith 179935bd34faSBarry Smith PetscFunctionBegin; 180035bd34faSBarry Smith info->block_size = 1.0; 1801cb828f0fSHong Zhang info->nz_allocated = mumps->id.INFOG(20); 1802cb828f0fSHong Zhang info->nz_used = mumps->id.INFOG(20); 180335bd34faSBarry Smith info->nz_unneeded = 0.0; 180435bd34faSBarry Smith info->assemblies = 0.0; 180535bd34faSBarry Smith info->mallocs = 0.0; 180635bd34faSBarry Smith info->memory = 0.0; 180735bd34faSBarry Smith info->fill_ratio_given = 0; 180835bd34faSBarry Smith info->fill_ratio_needed = 0; 180935bd34faSBarry Smith info->factor_mallocs = 0; 181035bd34faSBarry Smith PetscFunctionReturn(0); 181135bd34faSBarry Smith } 181235bd34faSBarry Smith 18135ccb76cbSHong Zhang /* -------------------------------------------------------------------------------------------*/ 18148e7ba810SStefano Zampini PetscErrorCode MatFactorSetSchurIS_MUMPS(Mat F, IS is) 18156444a565SStefano Zampini { 1816e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 18178e7ba810SStefano Zampini const PetscInt *idxs; 18188e7ba810SStefano Zampini PetscInt size,i; 18196444a565SStefano Zampini PetscErrorCode ierr; 18206444a565SStefano Zampini 18216444a565SStefano Zampini PetscFunctionBegin; 1822b3cb21ddSStefano Zampini ierr = ISGetLocalSize(is,&size);CHKERRQ(ierr); 18232d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 18243ab56b82SJunchao Zhang PetscBool ls,gs; /* gs is false if any rank other than root has non-empty IS */ 1825241dbb5eSStefano Zampini 18263ab56b82SJunchao Zhang ls = mumps->myid ? (size ? PETSC_FALSE : PETSC_TRUE) : PETSC_TRUE; /* always true on root; false on others if their size != 0 */ 18273ab56b82SJunchao Zhang ierr = MPI_Allreduce(&ls,&gs,1,MPIU_BOOL,MPI_LAND,mumps->petsc_comm);CHKERRQ(ierr); 1828241dbb5eSStefano Zampini if (!gs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MUMPS distributed parallel Schur complements not yet supported from PETSc\n"); 1829241dbb5eSStefano Zampini } 18306444a565SStefano Zampini if (mumps->id.size_schur != size) { 18316444a565SStefano Zampini ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr); 18326444a565SStefano Zampini mumps->id.size_schur = size; 18336444a565SStefano Zampini mumps->id.schur_lld = size; 18346444a565SStefano Zampini ierr = PetscMalloc2(size,&mumps->id.listvar_schur,size*size,&mumps->id.schur);CHKERRQ(ierr); 18356444a565SStefano Zampini } 1836b3cb21ddSStefano Zampini 1837b3cb21ddSStefano Zampini /* Schur complement matrix */ 1838b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.size_schur,(PetscScalar*)mumps->id.schur,&F->schur);CHKERRQ(ierr); 1839b3cb21ddSStefano Zampini if (mumps->sym == 1) { 1840b3cb21ddSStefano Zampini ierr = MatSetOption(F->schur,MAT_SPD,PETSC_TRUE);CHKERRQ(ierr); 1841b3cb21ddSStefano Zampini } 1842b3cb21ddSStefano Zampini 1843b3cb21ddSStefano Zampini /* MUMPS expects Fortran style indices */ 18448e7ba810SStefano Zampini ierr = ISGetIndices(is,&idxs);CHKERRQ(ierr); 1845580bdb30SBarry Smith ierr = PetscArraycpy(mumps->id.listvar_schur,idxs,size);CHKERRQ(ierr); 18468e7ba810SStefano Zampini for (i=0;i<size;i++) mumps->id.listvar_schur[i]++; 18478e7ba810SStefano Zampini ierr = ISRestoreIndices(is,&idxs);CHKERRQ(ierr); 18482d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 1849241dbb5eSStefano Zampini mumps->id.ICNTL(19) = 1; /* MUMPS returns Schur centralized on the host */ 1850241dbb5eSStefano Zampini } else { 18516444a565SStefano Zampini if (F->factortype == MAT_FACTOR_LU) { 185259ac8732SStefano Zampini mumps->id.ICNTL(19) = 3; /* MUMPS returns full matrix */ 18536444a565SStefano Zampini } else { 185459ac8732SStefano Zampini mumps->id.ICNTL(19) = 2; /* MUMPS returns lower triangular part */ 18556444a565SStefano Zampini } 1856241dbb5eSStefano Zampini } 185759ac8732SStefano Zampini /* set a special value of ICNTL (not handled my MUMPS) to be used in the solve phase by PETSc */ 1858b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 18596444a565SStefano Zampini PetscFunctionReturn(0); 18606444a565SStefano Zampini } 186159ac8732SStefano Zampini 18626444a565SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 18635a05ddb0SStefano Zampini PetscErrorCode MatFactorCreateSchurComplement_MUMPS(Mat F,Mat* S) 18646444a565SStefano Zampini { 18656444a565SStefano Zampini Mat St; 1866e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 18676444a565SStefano Zampini PetscScalar *array; 18686444a565SStefano Zampini #if defined(PETSC_USE_COMPLEX) 18698ac429a0SStefano Zampini PetscScalar im = PetscSqrtScalar((PetscScalar)-1.0); 18706444a565SStefano Zampini #endif 18716444a565SStefano Zampini PetscErrorCode ierr; 18726444a565SStefano Zampini 18736444a565SStefano Zampini PetscFunctionBegin; 18745a05ddb0SStefano Zampini if (!mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it"); 1875241dbb5eSStefano Zampini ierr = MatCreate(PETSC_COMM_SELF,&St);CHKERRQ(ierr); 18766444a565SStefano Zampini ierr = MatSetSizes(St,PETSC_DECIDE,PETSC_DECIDE,mumps->id.size_schur,mumps->id.size_schur);CHKERRQ(ierr); 18776444a565SStefano Zampini ierr = MatSetType(St,MATDENSE);CHKERRQ(ierr); 18786444a565SStefano Zampini ierr = MatSetUp(St);CHKERRQ(ierr); 18796444a565SStefano Zampini ierr = MatDenseGetArray(St,&array);CHKERRQ(ierr); 188059ac8732SStefano Zampini if (!mumps->sym) { /* MUMPS always return a full matrix */ 18816444a565SStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 18826444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 18836444a565SStefano Zampini for (i=0;i<N;i++) { 18846444a565SStefano Zampini for (j=0;j<N;j++) { 18856444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 18866444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 18876444a565SStefano Zampini #else 18886444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 18896444a565SStefano Zampini #endif 18906444a565SStefano Zampini array[j*N+i] = val; 18916444a565SStefano Zampini } 18926444a565SStefano Zampini } 18936444a565SStefano Zampini } else { /* stored by columns */ 1894580bdb30SBarry Smith ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr); 18956444a565SStefano Zampini } 18966444a565SStefano Zampini } else { /* either full or lower-triangular (not packed) */ 18976444a565SStefano Zampini if (mumps->id.ICNTL(19) == 2) { /* lower triangular stored by columns */ 18986444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 18996444a565SStefano Zampini for (i=0;i<N;i++) { 19006444a565SStefano Zampini for (j=i;j<N;j++) { 19016444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19026444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19036444a565SStefano Zampini #else 19046444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19056444a565SStefano Zampini #endif 19066444a565SStefano Zampini array[i*N+j] = val; 19076444a565SStefano Zampini array[j*N+i] = val; 19086444a565SStefano Zampini } 19096444a565SStefano Zampini } 19106444a565SStefano Zampini } else if (mumps->id.ICNTL(19) == 3) { /* full matrix */ 1911580bdb30SBarry Smith ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr); 19126444a565SStefano Zampini } else { /* ICNTL(19) == 1 lower triangular stored by rows */ 19136444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19146444a565SStefano Zampini for (i=0;i<N;i++) { 19156444a565SStefano Zampini for (j=0;j<i+1;j++) { 19166444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19176444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19186444a565SStefano Zampini #else 19196444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19206444a565SStefano Zampini #endif 19216444a565SStefano Zampini array[i*N+j] = val; 19226444a565SStefano Zampini array[j*N+i] = val; 19236444a565SStefano Zampini } 19246444a565SStefano Zampini } 19256444a565SStefano Zampini } 19266444a565SStefano Zampini } 19276444a565SStefano Zampini ierr = MatDenseRestoreArray(St,&array);CHKERRQ(ierr); 19286444a565SStefano Zampini *S = St; 19296444a565SStefano Zampini PetscFunctionReturn(0); 19306444a565SStefano Zampini } 19316444a565SStefano Zampini 193259ac8732SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 19335ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt ival) 19345ccb76cbSHong Zhang { 1935e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 19365ccb76cbSHong Zhang 19375ccb76cbSHong Zhang PetscFunctionBegin; 1938a5e57a09SHong Zhang mumps->id.ICNTL(icntl) = ival; 19395ccb76cbSHong Zhang PetscFunctionReturn(0); 19405ccb76cbSHong Zhang } 19415ccb76cbSHong Zhang 1942bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt *ival) 1943bc6112feSHong Zhang { 1944e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1945bc6112feSHong Zhang 1946bc6112feSHong Zhang PetscFunctionBegin; 1947bc6112feSHong Zhang *ival = mumps->id.ICNTL(icntl); 1948bc6112feSHong Zhang PetscFunctionReturn(0); 1949bc6112feSHong Zhang } 1950bc6112feSHong Zhang 19515ccb76cbSHong Zhang /*@ 19525ccb76cbSHong Zhang MatMumpsSetIcntl - Set MUMPS parameter ICNTL() 19535ccb76cbSHong Zhang 19545ccb76cbSHong Zhang Logically Collective on Mat 19555ccb76cbSHong Zhang 19565ccb76cbSHong Zhang Input Parameters: 19575ccb76cbSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 19585ccb76cbSHong Zhang . icntl - index of MUMPS parameter array ICNTL() 19595ccb76cbSHong Zhang - ival - value of MUMPS ICNTL(icntl) 19605ccb76cbSHong Zhang 19615ccb76cbSHong Zhang Options Database: 19625ccb76cbSHong Zhang . -mat_mumps_icntl_<icntl> <ival> 19635ccb76cbSHong Zhang 19645ccb76cbSHong Zhang Level: beginner 19655ccb76cbSHong Zhang 196696a0c994SBarry Smith References: 196796a0c994SBarry Smith . MUMPS Users' Guide 19685ccb76cbSHong Zhang 19699fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 19705ccb76cbSHong Zhang @*/ 19715ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl(Mat F,PetscInt icntl,PetscInt ival) 19725ccb76cbSHong Zhang { 19735ccb76cbSHong Zhang PetscErrorCode ierr; 19745ccb76cbSHong Zhang 19755ccb76cbSHong Zhang PetscFunctionBegin; 19762989dfd4SHong Zhang PetscValidType(F,1); 19772989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 19785ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 19795ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,ival,3); 19805ccb76cbSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetIcntl_C",(Mat,PetscInt,PetscInt),(F,icntl,ival));CHKERRQ(ierr); 19815ccb76cbSHong Zhang PetscFunctionReturn(0); 19825ccb76cbSHong Zhang } 19835ccb76cbSHong Zhang 1984a21f80fcSHong Zhang /*@ 1985a21f80fcSHong Zhang MatMumpsGetIcntl - Get MUMPS parameter ICNTL() 1986a21f80fcSHong Zhang 1987a21f80fcSHong Zhang Logically Collective on Mat 1988a21f80fcSHong Zhang 1989a21f80fcSHong Zhang Input Parameters: 1990a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 1991a21f80fcSHong Zhang - icntl - index of MUMPS parameter array ICNTL() 1992a21f80fcSHong Zhang 1993a21f80fcSHong Zhang Output Parameter: 1994a21f80fcSHong Zhang . ival - value of MUMPS ICNTL(icntl) 1995a21f80fcSHong Zhang 1996a21f80fcSHong Zhang Level: beginner 1997a21f80fcSHong Zhang 199896a0c994SBarry Smith References: 199996a0c994SBarry Smith . MUMPS Users' Guide 2000a21f80fcSHong Zhang 20019fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2002a21f80fcSHong Zhang @*/ 2003bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl(Mat F,PetscInt icntl,PetscInt *ival) 2004bc6112feSHong Zhang { 2005bc6112feSHong Zhang PetscErrorCode ierr; 2006bc6112feSHong Zhang 2007bc6112feSHong Zhang PetscFunctionBegin; 20082989dfd4SHong Zhang PetscValidType(F,1); 20092989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2010bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2011bc6112feSHong Zhang PetscValidIntPointer(ival,3); 20122989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetIcntl_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2013bc6112feSHong Zhang PetscFunctionReturn(0); 2014bc6112feSHong Zhang } 2015bc6112feSHong Zhang 20168928b65cSHong Zhang /* -------------------------------------------------------------------------------------------*/ 20178928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal val) 20188928b65cSHong Zhang { 2019e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 20208928b65cSHong Zhang 20218928b65cSHong Zhang PetscFunctionBegin; 20228928b65cSHong Zhang mumps->id.CNTL(icntl) = val; 20238928b65cSHong Zhang PetscFunctionReturn(0); 20248928b65cSHong Zhang } 20258928b65cSHong Zhang 2026bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal *val) 2027bc6112feSHong Zhang { 2028e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2029bc6112feSHong Zhang 2030bc6112feSHong Zhang PetscFunctionBegin; 2031bc6112feSHong Zhang *val = mumps->id.CNTL(icntl); 2032bc6112feSHong Zhang PetscFunctionReturn(0); 2033bc6112feSHong Zhang } 2034bc6112feSHong Zhang 20358928b65cSHong Zhang /*@ 20368928b65cSHong Zhang MatMumpsSetCntl - Set MUMPS parameter CNTL() 20378928b65cSHong Zhang 20388928b65cSHong Zhang Logically Collective on Mat 20398928b65cSHong Zhang 20408928b65cSHong Zhang Input Parameters: 20418928b65cSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 20428928b65cSHong Zhang . icntl - index of MUMPS parameter array CNTL() 20438928b65cSHong Zhang - val - value of MUMPS CNTL(icntl) 20448928b65cSHong Zhang 20458928b65cSHong Zhang Options Database: 20468928b65cSHong Zhang . -mat_mumps_cntl_<icntl> <val> 20478928b65cSHong Zhang 20488928b65cSHong Zhang Level: beginner 20498928b65cSHong Zhang 205096a0c994SBarry Smith References: 205196a0c994SBarry Smith . MUMPS Users' Guide 20528928b65cSHong Zhang 20539fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 20548928b65cSHong Zhang @*/ 20558928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl(Mat F,PetscInt icntl,PetscReal val) 20568928b65cSHong Zhang { 20578928b65cSHong Zhang PetscErrorCode ierr; 20588928b65cSHong Zhang 20598928b65cSHong Zhang PetscFunctionBegin; 20602989dfd4SHong Zhang PetscValidType(F,1); 20612989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 20628928b65cSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2063bc6112feSHong Zhang PetscValidLogicalCollectiveReal(F,val,3); 20648928b65cSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetCntl_C",(Mat,PetscInt,PetscReal),(F,icntl,val));CHKERRQ(ierr); 20658928b65cSHong Zhang PetscFunctionReturn(0); 20668928b65cSHong Zhang } 20678928b65cSHong Zhang 2068a21f80fcSHong Zhang /*@ 2069a21f80fcSHong Zhang MatMumpsGetCntl - Get MUMPS parameter CNTL() 2070a21f80fcSHong Zhang 2071a21f80fcSHong Zhang Logically Collective on Mat 2072a21f80fcSHong Zhang 2073a21f80fcSHong Zhang Input Parameters: 2074a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2075a21f80fcSHong Zhang - icntl - index of MUMPS parameter array CNTL() 2076a21f80fcSHong Zhang 2077a21f80fcSHong Zhang Output Parameter: 2078a21f80fcSHong Zhang . val - value of MUMPS CNTL(icntl) 2079a21f80fcSHong Zhang 2080a21f80fcSHong Zhang Level: beginner 2081a21f80fcSHong Zhang 208296a0c994SBarry Smith References: 208396a0c994SBarry Smith . MUMPS Users' Guide 2084a21f80fcSHong Zhang 20859fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2086a21f80fcSHong Zhang @*/ 2087bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl(Mat F,PetscInt icntl,PetscReal *val) 2088bc6112feSHong Zhang { 2089bc6112feSHong Zhang PetscErrorCode ierr; 2090bc6112feSHong Zhang 2091bc6112feSHong Zhang PetscFunctionBegin; 20922989dfd4SHong Zhang PetscValidType(F,1); 20932989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2094bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2095bc6112feSHong Zhang PetscValidRealPointer(val,3); 20962989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetCntl_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2097bc6112feSHong Zhang PetscFunctionReturn(0); 2098bc6112feSHong Zhang } 2099bc6112feSHong Zhang 2100ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo_MUMPS(Mat F,PetscInt icntl,PetscInt *info) 2101bc6112feSHong Zhang { 2102e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2103bc6112feSHong Zhang 2104bc6112feSHong Zhang PetscFunctionBegin; 2105bc6112feSHong Zhang *info = mumps->id.INFO(icntl); 2106bc6112feSHong Zhang PetscFunctionReturn(0); 2107bc6112feSHong Zhang } 2108bc6112feSHong Zhang 2109ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog_MUMPS(Mat F,PetscInt icntl,PetscInt *infog) 2110bc6112feSHong Zhang { 2111e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2112bc6112feSHong Zhang 2113bc6112feSHong Zhang PetscFunctionBegin; 2114bc6112feSHong Zhang *infog = mumps->id.INFOG(icntl); 2115bc6112feSHong Zhang PetscFunctionReturn(0); 2116bc6112feSHong Zhang } 2117bc6112feSHong Zhang 2118ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfo) 2119bc6112feSHong Zhang { 2120e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2121bc6112feSHong Zhang 2122bc6112feSHong Zhang PetscFunctionBegin; 2123bc6112feSHong Zhang *rinfo = mumps->id.RINFO(icntl); 2124bc6112feSHong Zhang PetscFunctionReturn(0); 2125bc6112feSHong Zhang } 2126bc6112feSHong Zhang 2127ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfog) 2128bc6112feSHong Zhang { 2129e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2130bc6112feSHong Zhang 2131bc6112feSHong Zhang PetscFunctionBegin; 2132bc6112feSHong Zhang *rinfog = mumps->id.RINFOG(icntl); 2133bc6112feSHong Zhang PetscFunctionReturn(0); 2134bc6112feSHong Zhang } 2135bc6112feSHong Zhang 213689a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse_MUMPS(Mat F,Mat spRHS) 2137bb599dfdSHong Zhang { 2138bb599dfdSHong Zhang PetscErrorCode ierr; 21390e6b8875SHong Zhang Mat Bt = NULL,Btseq = NULL; 21400e6b8875SHong Zhang PetscBool flg; 2141bb599dfdSHong Zhang Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2142bb599dfdSHong Zhang PetscScalar *aa; 2143bb599dfdSHong Zhang PetscInt spnr,*ia,*ja; 2144bb599dfdSHong Zhang 2145bb599dfdSHong Zhang PetscFunctionBegin; 2146e3f2db6aSHong Zhang PetscValidIntPointer(spRHS,2); 21470e6b8875SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)spRHS,MATTRANSPOSEMAT,&flg);CHKERRQ(ierr); 21480e6b8875SHong Zhang if (flg) { 2149bb599dfdSHong Zhang ierr = MatTransposeGetMat(spRHS,&Bt);CHKERRQ(ierr); 21500e6b8875SHong Zhang } else SETERRQ(PetscObjectComm((PetscObject)spRHS),PETSC_ERR_ARG_WRONG,"Matrix spRHS must be type MATTRANSPOSEMAT matrix"); 2151bb599dfdSHong Zhang 2152bb599dfdSHong Zhang ierr = MatMumpsSetIcntl(F,30,1);CHKERRQ(ierr); 2153bb599dfdSHong Zhang 21542d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 21550e6b8875SHong Zhang Mat_MPIAIJ *b = (Mat_MPIAIJ*)Bt->data; 21560e6b8875SHong Zhang Btseq = b->A; 21570e6b8875SHong Zhang } else { 21580e6b8875SHong Zhang Btseq = Bt; 21590e6b8875SHong Zhang } 21600e6b8875SHong Zhang 2161e3f2db6aSHong Zhang if (!mumps->myid) { 21620e6b8875SHong Zhang ierr = MatSeqAIJGetArray(Btseq,&aa);CHKERRQ(ierr); 21630e6b8875SHong Zhang ierr = MatGetRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 21640e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2165bb599dfdSHong Zhang 2166bb599dfdSHong Zhang mumps->id.irhs_ptr = ia; 2167bb599dfdSHong Zhang mumps->id.irhs_sparse = ja; 2168bb599dfdSHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 2169bb599dfdSHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 2170e3f2db6aSHong Zhang } else { 2171e3f2db6aSHong Zhang mumps->id.irhs_ptr = NULL; 2172e3f2db6aSHong Zhang mumps->id.irhs_sparse = NULL; 2173e3f2db6aSHong Zhang mumps->id.nz_rhs = 0; 2174e3f2db6aSHong Zhang mumps->id.rhs_sparse = NULL; 2175e3f2db6aSHong Zhang } 2176bb599dfdSHong Zhang mumps->id.ICNTL(20) = 1; /* rhs is sparse */ 2177e3f2db6aSHong Zhang mumps->id.ICNTL(21) = 0; /* solution is in assembled centralized format */ 2178bb599dfdSHong Zhang 2179bb599dfdSHong Zhang /* solve phase */ 2180bb599dfdSHong Zhang /*-------------*/ 2181bb599dfdSHong Zhang mumps->id.job = JOB_SOLVE; 21823ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 2183e3f2db6aSHong Zhang if (mumps->id.INFOG(1) < 0) 2184e3f2db6aSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 218514267174SHong Zhang 2186e3f2db6aSHong Zhang if (!mumps->myid) { 21870e6b8875SHong Zhang ierr = MatSeqAIJRestoreArray(Btseq,&aa);CHKERRQ(ierr); 21880e6b8875SHong Zhang ierr = MatRestoreRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 21890e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2190e3f2db6aSHong Zhang } 2191bb599dfdSHong Zhang PetscFunctionReturn(0); 2192bb599dfdSHong Zhang } 2193bb599dfdSHong Zhang 2194bb599dfdSHong Zhang /*@ 219589a9c03aSHong Zhang MatMumpsGetInverse - Get user-specified set of entries in inverse of A 2196bb599dfdSHong Zhang 2197bb599dfdSHong Zhang Logically Collective on Mat 2198bb599dfdSHong Zhang 2199bb599dfdSHong Zhang Input Parameters: 2200bb599dfdSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2201e3f2db6aSHong Zhang - spRHS - sequential sparse matrix in MATTRANSPOSEMAT format holding specified indices in processor[0] 2202bb599dfdSHong Zhang 2203bb599dfdSHong Zhang Output Parameter: 2204e3f2db6aSHong Zhang . spRHS - requested entries of inverse of A 2205bb599dfdSHong Zhang 2206bb599dfdSHong Zhang Level: beginner 2207bb599dfdSHong Zhang 2208bb599dfdSHong Zhang References: 2209bb599dfdSHong Zhang . MUMPS Users' Guide 2210bb599dfdSHong Zhang 2211bb599dfdSHong Zhang .seealso: MatGetFactor(), MatCreateTranspose() 2212bb599dfdSHong Zhang @*/ 221389a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse(Mat F,Mat spRHS) 2214bb599dfdSHong Zhang { 2215bb599dfdSHong Zhang PetscErrorCode ierr; 2216bb599dfdSHong Zhang 2217bb599dfdSHong Zhang PetscFunctionBegin; 2218bb599dfdSHong Zhang PetscValidType(F,1); 2219bb599dfdSHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 222089a9c03aSHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverse_C",(Mat,Mat),(F,spRHS));CHKERRQ(ierr); 2221bb599dfdSHong Zhang PetscFunctionReturn(0); 2222bb599dfdSHong Zhang } 2223bb599dfdSHong Zhang 22240e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose_MUMPS(Mat F,Mat spRHST) 22250e6b8875SHong Zhang { 22260e6b8875SHong Zhang PetscErrorCode ierr; 22270e6b8875SHong Zhang Mat spRHS; 22280e6b8875SHong Zhang 22290e6b8875SHong Zhang PetscFunctionBegin; 22300e6b8875SHong Zhang ierr = MatCreateTranspose(spRHST,&spRHS);CHKERRQ(ierr); 22310e6b8875SHong Zhang ierr = MatMumpsGetInverse_MUMPS(F,spRHS);CHKERRQ(ierr); 22320e6b8875SHong Zhang ierr = MatDestroy(&spRHS);CHKERRQ(ierr); 22330e6b8875SHong Zhang PetscFunctionReturn(0); 22340e6b8875SHong Zhang } 22350e6b8875SHong Zhang 22360e6b8875SHong Zhang /*@ 2237eef1237cSHong Zhang MatMumpsGetInverseTranspose - Get user-specified set of entries in inverse of matrix A^T 22380e6b8875SHong Zhang 22390e6b8875SHong Zhang Logically Collective on Mat 22400e6b8875SHong Zhang 22410e6b8875SHong Zhang Input Parameters: 22420e6b8875SHong Zhang + F - the factored matrix of A obtained by calling MatGetFactor() from PETSc-MUMPS interface 22430e6b8875SHong Zhang - spRHST - sequential sparse matrix in MATAIJ format holding specified indices of A^T in processor[0] 22440e6b8875SHong Zhang 22450e6b8875SHong Zhang Output Parameter: 22460e6b8875SHong Zhang . spRHST - requested entries of inverse of A^T 22470e6b8875SHong Zhang 22480e6b8875SHong Zhang Level: beginner 22490e6b8875SHong Zhang 22500e6b8875SHong Zhang References: 22510e6b8875SHong Zhang . MUMPS Users' Guide 22520e6b8875SHong Zhang 22530e6b8875SHong Zhang .seealso: MatGetFactor(), MatCreateTranspose(), MatMumpsGetInverse() 22540e6b8875SHong Zhang @*/ 22550e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose(Mat F,Mat spRHST) 22560e6b8875SHong Zhang { 22570e6b8875SHong Zhang PetscErrorCode ierr; 22580e6b8875SHong Zhang PetscBool flg; 22590e6b8875SHong Zhang 22600e6b8875SHong Zhang PetscFunctionBegin; 22610e6b8875SHong Zhang PetscValidType(F,1); 22620e6b8875SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 22630e6b8875SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)spRHST,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 22640e6b8875SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)spRHST),PETSC_ERR_ARG_WRONG,"Matrix spRHST must be MATAIJ matrix"); 22650e6b8875SHong Zhang 22660e6b8875SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverseTranspose_C",(Mat,Mat),(F,spRHST));CHKERRQ(ierr); 22670e6b8875SHong Zhang PetscFunctionReturn(0); 22680e6b8875SHong Zhang } 22690e6b8875SHong Zhang 2270a21f80fcSHong Zhang /*@ 2271a21f80fcSHong Zhang MatMumpsGetInfo - Get MUMPS parameter INFO() 2272a21f80fcSHong Zhang 2273a21f80fcSHong Zhang Logically Collective on Mat 2274a21f80fcSHong Zhang 2275a21f80fcSHong Zhang Input Parameters: 2276a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2277a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFO() 2278a21f80fcSHong Zhang 2279a21f80fcSHong Zhang Output Parameter: 2280a21f80fcSHong Zhang . ival - value of MUMPS INFO(icntl) 2281a21f80fcSHong Zhang 2282a21f80fcSHong Zhang Level: beginner 2283a21f80fcSHong Zhang 228496a0c994SBarry Smith References: 228596a0c994SBarry Smith . MUMPS Users' Guide 2286a21f80fcSHong Zhang 22879fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2288a21f80fcSHong Zhang @*/ 2289ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo(Mat F,PetscInt icntl,PetscInt *ival) 2290bc6112feSHong Zhang { 2291bc6112feSHong Zhang PetscErrorCode ierr; 2292bc6112feSHong Zhang 2293bc6112feSHong Zhang PetscFunctionBegin; 22942989dfd4SHong Zhang PetscValidType(F,1); 22952989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2296ca810319SHong Zhang PetscValidIntPointer(ival,3); 22972989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfo_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2298bc6112feSHong Zhang PetscFunctionReturn(0); 2299bc6112feSHong Zhang } 2300bc6112feSHong Zhang 2301a21f80fcSHong Zhang /*@ 2302a21f80fcSHong Zhang MatMumpsGetInfog - Get MUMPS parameter INFOG() 2303a21f80fcSHong Zhang 2304a21f80fcSHong Zhang Logically Collective on Mat 2305a21f80fcSHong Zhang 2306a21f80fcSHong Zhang Input Parameters: 2307a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2308a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFOG() 2309a21f80fcSHong Zhang 2310a21f80fcSHong Zhang Output Parameter: 2311a21f80fcSHong Zhang . ival - value of MUMPS INFOG(icntl) 2312a21f80fcSHong Zhang 2313a21f80fcSHong Zhang Level: beginner 2314a21f80fcSHong Zhang 231596a0c994SBarry Smith References: 231696a0c994SBarry Smith . MUMPS Users' Guide 2317a21f80fcSHong Zhang 23189fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2319a21f80fcSHong Zhang @*/ 2320ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog(Mat F,PetscInt icntl,PetscInt *ival) 2321bc6112feSHong Zhang { 2322bc6112feSHong Zhang PetscErrorCode ierr; 2323bc6112feSHong Zhang 2324bc6112feSHong Zhang PetscFunctionBegin; 23252989dfd4SHong Zhang PetscValidType(F,1); 23262989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2327ca810319SHong Zhang PetscValidIntPointer(ival,3); 23282989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfog_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2329bc6112feSHong Zhang PetscFunctionReturn(0); 2330bc6112feSHong Zhang } 2331bc6112feSHong Zhang 2332a21f80fcSHong Zhang /*@ 2333a21f80fcSHong Zhang MatMumpsGetRinfo - Get MUMPS parameter RINFO() 2334a21f80fcSHong Zhang 2335a21f80fcSHong Zhang Logically Collective on Mat 2336a21f80fcSHong Zhang 2337a21f80fcSHong Zhang Input Parameters: 2338a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2339a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFO() 2340a21f80fcSHong Zhang 2341a21f80fcSHong Zhang Output Parameter: 2342a21f80fcSHong Zhang . val - value of MUMPS RINFO(icntl) 2343a21f80fcSHong Zhang 2344a21f80fcSHong Zhang Level: beginner 2345a21f80fcSHong Zhang 234696a0c994SBarry Smith References: 234796a0c994SBarry Smith . MUMPS Users' Guide 2348a21f80fcSHong Zhang 23499fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2350a21f80fcSHong Zhang @*/ 2351ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo(Mat F,PetscInt icntl,PetscReal *val) 2352bc6112feSHong Zhang { 2353bc6112feSHong Zhang PetscErrorCode ierr; 2354bc6112feSHong Zhang 2355bc6112feSHong Zhang PetscFunctionBegin; 23562989dfd4SHong Zhang PetscValidType(F,1); 23572989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2358bc6112feSHong Zhang PetscValidRealPointer(val,3); 23592989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfo_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2360bc6112feSHong Zhang PetscFunctionReturn(0); 2361bc6112feSHong Zhang } 2362bc6112feSHong Zhang 2363a21f80fcSHong Zhang /*@ 2364a21f80fcSHong Zhang MatMumpsGetRinfog - Get MUMPS parameter RINFOG() 2365a21f80fcSHong Zhang 2366a21f80fcSHong Zhang Logically Collective on Mat 2367a21f80fcSHong Zhang 2368a21f80fcSHong Zhang Input Parameters: 2369a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2370a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFOG() 2371a21f80fcSHong Zhang 2372a21f80fcSHong Zhang Output Parameter: 2373a21f80fcSHong Zhang . val - value of MUMPS RINFOG(icntl) 2374a21f80fcSHong Zhang 2375a21f80fcSHong Zhang Level: beginner 2376a21f80fcSHong Zhang 237796a0c994SBarry Smith References: 237896a0c994SBarry Smith . MUMPS Users' Guide 2379a21f80fcSHong Zhang 23809fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2381a21f80fcSHong Zhang @*/ 2382ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog(Mat F,PetscInt icntl,PetscReal *val) 2383bc6112feSHong Zhang { 2384bc6112feSHong Zhang PetscErrorCode ierr; 2385bc6112feSHong Zhang 2386bc6112feSHong Zhang PetscFunctionBegin; 23872989dfd4SHong Zhang PetscValidType(F,1); 23882989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2389bc6112feSHong Zhang PetscValidRealPointer(val,3); 23902989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfog_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2391bc6112feSHong Zhang PetscFunctionReturn(0); 2392bc6112feSHong Zhang } 2393bc6112feSHong Zhang 239424b6179bSKris Buschelman /*MC 23952692d6eeSBarry Smith MATSOLVERMUMPS - A matrix type providing direct solvers (LU and Cholesky) for 239624b6179bSKris Buschelman distributed and sequential matrices via the external package MUMPS. 239724b6179bSKris Buschelman 239841c8de11SBarry Smith Works with MATAIJ and MATSBAIJ matrices 239924b6179bSKris Buschelman 2400c2b89b5dSBarry Smith Use ./configure --download-mumps --download-scalapack --download-parmetis --download-metis --download-ptscotch to have PETSc installed with MUMPS 2401c2b89b5dSBarry Smith 2402217d3b1eSJunchao Zhang Use ./configure --with-openmp --download-hwloc (or --with-hwloc) to enable running MUMPS in MPI+OpenMP hybrid mode and non-MUMPS in flat-MPI mode. See details below. 2403217d3b1eSJunchao Zhang 24043ca39a21SBarry Smith Use -pc_type cholesky or lu -pc_factor_mat_solver_type mumps to use this direct solver 2405c2b89b5dSBarry Smith 240624b6179bSKris Buschelman Options Database Keys: 24074422a9fcSPatrick Sanan + -mat_mumps_icntl_1 - ICNTL(1): output stream for error messages 24084422a9fcSPatrick Sanan . -mat_mumps_icntl_2 - ICNTL(2): output stream for diagnostic printing, statistics, and warning 24094422a9fcSPatrick Sanan . -mat_mumps_icntl_3 - ICNTL(3): output stream for global information, collected on the host 24104422a9fcSPatrick Sanan . -mat_mumps_icntl_4 - ICNTL(4): level of printing (0 to 4) 24114422a9fcSPatrick Sanan . -mat_mumps_icntl_6 - ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7) 24124422a9fcSPatrick Sanan . -mat_mumps_icntl_7 - ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis 24134422a9fcSPatrick Sanan . -mat_mumps_icntl_8 - ICNTL(8): scaling strategy (-2 to 8 or 77) 24144422a9fcSPatrick Sanan . -mat_mumps_icntl_10 - ICNTL(10): max num of refinements 24154422a9fcSPatrick Sanan . -mat_mumps_icntl_11 - ICNTL(11): statistics related to an error analysis (via -ksp_view) 24164422a9fcSPatrick Sanan . -mat_mumps_icntl_12 - ICNTL(12): an ordering strategy for symmetric matrices (0 to 3) 24174422a9fcSPatrick Sanan . -mat_mumps_icntl_13 - ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting 24184422a9fcSPatrick Sanan . -mat_mumps_icntl_14 - ICNTL(14): percentage increase in the estimated working space 24194422a9fcSPatrick Sanan . -mat_mumps_icntl_19 - ICNTL(19): computes the Schur complement 24204422a9fcSPatrick Sanan . -mat_mumps_icntl_22 - ICNTL(22): in-core/out-of-core factorization and solve (0 or 1) 24214422a9fcSPatrick Sanan . -mat_mumps_icntl_23 - ICNTL(23): max size of the working memory (MB) that can allocate per processor 24224422a9fcSPatrick Sanan . -mat_mumps_icntl_24 - ICNTL(24): detection of null pivot rows (0 or 1) 24234422a9fcSPatrick Sanan . -mat_mumps_icntl_25 - ICNTL(25): compute a solution of a deficient matrix and a null space basis 24244422a9fcSPatrick Sanan . -mat_mumps_icntl_26 - ICNTL(26): drives the solution phase if a Schur complement matrix 24254422a9fcSPatrick Sanan . -mat_mumps_icntl_28 - ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering 24264422a9fcSPatrick Sanan . -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis 24274422a9fcSPatrick Sanan . -mat_mumps_icntl_30 - ICNTL(30): compute user-specified set of entries in inv(A) 24284422a9fcSPatrick Sanan . -mat_mumps_icntl_31 - ICNTL(31): indicates which factors may be discarded during factorization 24294422a9fcSPatrick Sanan . -mat_mumps_icntl_33 - ICNTL(33): compute determinant 2430a0e18203SThibaut Appel . -mat_mumps_icntl_35 - ICNTL(35): level of activation of BLR (Block Low-Rank) feature 2431a0e18203SThibaut Appel . -mat_mumps_icntl_36 - ICNTL(36): controls the choice of BLR factorization variant 2432a0e18203SThibaut Appel . -mat_mumps_icntl_38 - ICNTL(38): sets the estimated compression rate of LU factors with BLR 24334422a9fcSPatrick Sanan . -mat_mumps_cntl_1 - CNTL(1): relative pivoting threshold 24344422a9fcSPatrick Sanan . -mat_mumps_cntl_2 - CNTL(2): stopping criterion of refinement 24354422a9fcSPatrick Sanan . -mat_mumps_cntl_3 - CNTL(3): absolute pivoting threshold 24364422a9fcSPatrick Sanan . -mat_mumps_cntl_4 - CNTL(4): value for static pivoting 2437217d3b1eSJunchao Zhang . -mat_mumps_cntl_5 - CNTL(5): fixation for null pivots 2438a0e18203SThibaut Appel . -mat_mumps_cntl_7 - CNTL(7): precision of the dropping parameter used during BLR factorization 2439217d3b1eSJunchao Zhang - -mat_mumps_use_omp_threads [m] - run MUMPS in MPI+OpenMP hybrid mode as if omp_set_num_threads(m) is called before calling MUMPS. 2440217d3b1eSJunchao Zhang Default might be the number of cores per CPU package (socket) as reported by hwloc and suggested by the MUMPS manual. 244124b6179bSKris Buschelman 244224b6179bSKris Buschelman Level: beginner 244324b6179bSKris Buschelman 244495452b02SPatrick Sanan Notes: 2445c0decd05SBarry Smith When a MUMPS factorization fails inside a KSP solve, for example with a KSP_DIVERGED_PC_FAILED, one can find the MUMPS information about the failure by calling 24469fc87aa7SBarry Smith $ KSPGetPC(ksp,&pc); 24479fc87aa7SBarry Smith $ PCFactorGetMatrix(pc,&mat); 24489fc87aa7SBarry Smith $ MatMumpsGetInfo(mat,....); 24499fc87aa7SBarry Smith $ MatMumpsGetInfog(mat,....); etc. 24509fc87aa7SBarry Smith Or you can run with -ksp_error_if_not_converged and the program will be stopped and the information printed in the error message. 24519fc87aa7SBarry Smith 2452217d3b1eSJunchao Zhang If you want to run MUMPS in MPI+OpenMP hybrid mode (i.e., enable multithreading in MUMPS), but still want to run the non-MUMPS part 2453217d3b1eSJunchao Zhang (i.e., PETSc part) of your code in the so-called flat-MPI (aka pure-MPI) mode, you need to configure PETSc with --with-openmp --download-hwloc 2454217d3b1eSJunchao Zhang (or --with-hwloc), and have an MPI that supports MPI-3.0's process shared memory (which is usually available). Since MUMPS calls BLAS 2455217d3b1eSJunchao Zhang libraries, to really get performance, you should have multithreaded BLAS libraries such as Intel MKL, AMD ACML, Cray libSci or open sourced 2456217d3b1eSJunchao Zhang OpenBLAS (PETSc has configure options to install/specify them). With these conditions met, you can run your program as before but with 2457217d3b1eSJunchao Zhang an extra option -mat_mumps_use_omp_threads [m]. It works as if we set OMP_NUM_THREADS=m to MUMPS, with m defaults to the number of cores 2458217d3b1eSJunchao Zhang per CPU socket (or package, in hwloc term), or number of PETSc MPI processes on a node, whichever is smaller. 2459217d3b1eSJunchao Zhang 2460217d3b1eSJunchao Zhang By flat-MPI or pure-MPI mode, it means you run your code with as many MPI ranks as the number of cores. For example, 2461217d3b1eSJunchao Zhang if a compute node has 32 cores and you run on two nodes, you may use "mpirun -n 64 ./test". To run MPI+OpenMP hybrid MUMPS, 2462217d3b1eSJunchao Zhang the tranditional way is to set OMP_NUM_THREADS and run with fewer MPI ranks than cores. For example, if you want to have 16 OpenMP 2463217d3b1eSJunchao Zhang threads per rank, then you may use "export OMP_NUM_THREADS=16 && mpirun -n 4 ./test". The problem of this approach is that the non-MUMPS 2464217d3b1eSJunchao Zhang part of your code is run with fewer cores and CPUs are wasted. "-mat_mumps_use_omp_threads [m]" provides an alternative such that 2465217d3b1eSJunchao Zhang you can stil run your code with as many MPI ranks as the number of cores, but have MUMPS run in MPI+OpenMP hybrid mode. In our example, 2466217d3b1eSJunchao Zhang you can use "mpirun -n 64 ./test -mat_mumps_use_omp_threads 16". 2467217d3b1eSJunchao Zhang 2468217d3b1eSJunchao Zhang If you run your code through a job submission system, there are caveats in MPI rank mapping. We use MPI_Comm_split_type to get MPI 2469217d3b1eSJunchao Zhang processes on each compute node. Listing the processes in rank ascending order, we split processes on a node into consecutive groups of 2470217d3b1eSJunchao Zhang size m and create a communicator called omp_comm for each group. Rank 0 in an omp_comm is called the master rank, and others in the omp_comm 2471217d3b1eSJunchao Zhang are called slave ranks (or slaves). Only master ranks are seen to MUMPS and slaves are not. We will free CPUs assigned to slaves (might be set 2472217d3b1eSJunchao Zhang by CPU binding policies in job scripts) and make the CPUs available to the master so that OMP threads spawned by MUMPS can run on the CPUs. 2473217d3b1eSJunchao Zhang In a multi-socket compute node, MPI rank mapping is an issue. Still use the above example and suppose your compute node has two sockets, 2474217d3b1eSJunchao Zhang if you interleave MPI ranks on the two sockets, in other words, even ranks are placed on socket 0, and odd ranks are on socket 1, and bind 2475217d3b1eSJunchao Zhang MPI ranks to cores, then with -mat_mumps_use_omp_threads 16, a master rank (and threads it spawns) will use half cores in socket 0, and half 2476217d3b1eSJunchao Zhang cores in socket 1, that definitely hurts locality. On the other hand, if you map MPI ranks consecutively on the two sockets, then the 2477217d3b1eSJunchao Zhang problem will not happen. Therefore, when you use -mat_mumps_use_omp_threads, you need to keep an eye on your MPI rank mapping and CPU binding. 2478217d3b1eSJunchao Zhang For example, with the Slurm job scheduler, one can use srun --cpu-bind=verbsoe -m block:block to map consecutive MPI ranks to sockets and 2479217d3b1eSJunchao Zhang examine the mapping result. 2480217d3b1eSJunchao Zhang 2481217d3b1eSJunchao Zhang PETSc does not control thread binding in MUMPS. So to get best performance, one still has to set OMP_PROC_BIND and OMP_PLACES in job scripts, 2482217d3b1eSJunchao Zhang for example, export OMP_PLACES=threads and export OMP_PROC_BIND=spread. One does not need to export OMP_NUM_THREADS=m in job scripts as PETSc 2483217d3b1eSJunchao Zhang calls omp_set_num_threads(m) internally before calling MUMPS. 2484217d3b1eSJunchao Zhang 2485217d3b1eSJunchao Zhang References: 2486217d3b1eSJunchao Zhang + 1. - Heroux, Michael A., R. Brightwell, and Michael M. Wolf. "Bi-modal MPI and MPI+ threads computing on scalable multicore systems." IJHPCA (Submitted) (2011). 2487217d3b1eSJunchao Zhang - 2. - Gutierrez, Samuel K., et al. "Accommodating Thread-Level Heterogeneity in Coupled Parallel Applications." Parallel and Distributed Processing Symposium (IPDPS), 2017 IEEE International. IEEE, 2017. 2488217d3b1eSJunchao Zhang 24893ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog(), KSPGetPC(), PCGetFactor(), PCFactorGetMatrix() 249041c8de11SBarry Smith 249124b6179bSKris Buschelman M*/ 249224b6179bSKris Buschelman 2493ea799195SBarry Smith static PetscErrorCode MatFactorGetSolverType_mumps(Mat A,MatSolverType *type) 249435bd34faSBarry Smith { 249535bd34faSBarry Smith PetscFunctionBegin; 24962692d6eeSBarry Smith *type = MATSOLVERMUMPS; 249735bd34faSBarry Smith PetscFunctionReturn(0); 249835bd34faSBarry Smith } 249935bd34faSBarry Smith 2500bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI AIJ matrices */ 2501cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_aij_mumps(Mat A,MatFactorType ftype,Mat *F) 25022877fffaSHong Zhang { 25032877fffaSHong Zhang Mat B; 25042877fffaSHong Zhang PetscErrorCode ierr; 25052877fffaSHong Zhang Mat_MUMPS *mumps; 2506ace3abfcSBarry Smith PetscBool isSeqAIJ; 25072877fffaSHong Zhang 25082877fffaSHong Zhang PetscFunctionBegin; 25092877fffaSHong Zhang /* Create the factorization matrix */ 2510251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ);CHKERRQ(ierr); 2511ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 25122877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2513e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2514e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 25152877fffaSHong Zhang 2516b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 25172205254eSKarl Rupp 25182877fffaSHong Zhang B->ops->view = MatView_MUMPS; 251935bd34faSBarry Smith B->ops->getinfo = MatGetInfo_MUMPS; 25202205254eSKarl Rupp 25213ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 25225a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 25235a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2524bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2525bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2526bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2527bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2528ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2529ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2530ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2531ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 253289a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 25330e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 25346444a565SStefano Zampini 2535450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2536450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 2537d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 2538bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqaij; 2539bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpiaij; 2540746480a1SHong Zhang mumps->sym = 0; 2541dcd589f8SShri Abhyankar } else { 254267877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2543450b117fSShri Abhyankar B->factortype = MAT_FACTOR_CHOLESKY; 2544bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqsbaij; 2545bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpisbaij; 254659ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 254759ac8732SStefano Zampini mumps->sym = 2; 254859ac8732SStefano Zampini #else 25496fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 25506fdc2a6dSBarry Smith else mumps->sym = 2; 255159ac8732SStefano Zampini #endif 2552450b117fSShri Abhyankar } 25532877fffaSHong Zhang 255400c67f3bSHong Zhang /* set solvertype */ 255500c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 255600c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 255700c67f3bSHong Zhang 25582877fffaSHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2559e69c285eSBarry Smith B->data = (void*)mumps; 25602205254eSKarl Rupp 2561f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2562746480a1SHong Zhang 25632877fffaSHong Zhang *F = B; 25642877fffaSHong Zhang PetscFunctionReturn(0); 25652877fffaSHong Zhang } 25662877fffaSHong Zhang 2567bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI SBAIJ matrices */ 2568cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_sbaij_mumps(Mat A,MatFactorType ftype,Mat *F) 25692877fffaSHong Zhang { 25702877fffaSHong Zhang Mat B; 25712877fffaSHong Zhang PetscErrorCode ierr; 25722877fffaSHong Zhang Mat_MUMPS *mumps; 2573ace3abfcSBarry Smith PetscBool isSeqSBAIJ; 25742877fffaSHong Zhang 25752877fffaSHong Zhang PetscFunctionBegin; 2576ce94432eSBarry Smith if (ftype != MAT_FACTOR_CHOLESKY) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with MUMPS LU, use AIJ matrix"); 2577ce94432eSBarry Smith if (A->rmap->bs > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with block size > 1 with MUMPS Cholesky, use AIJ matrix instead"); 2578251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ);CHKERRQ(ierr); 25792877fffaSHong Zhang /* Create the factorization matrix */ 2580ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 25812877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2582e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2583e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2584e69c285eSBarry Smith 2585b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2586bccb9932SShri Abhyankar if (isSeqSBAIJ) { 258716ebf90aSShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_seqsbaij_seqsbaij; 2588dcd589f8SShri Abhyankar } else { 2589bccb9932SShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_mpisbaij_mpisbaij; 2590bccb9932SShri Abhyankar } 2591bccb9932SShri Abhyankar 2592e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 259367877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2594bccb9932SShri Abhyankar B->ops->view = MatView_MUMPS; 25952205254eSKarl Rupp 25963ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 25975a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 25985a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2599b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2600b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2601b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2602b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2603ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2604ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2605ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2606ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 260789a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2608eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 26092205254eSKarl Rupp 2610f4762488SHong Zhang B->factortype = MAT_FACTOR_CHOLESKY; 261159ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 261259ac8732SStefano Zampini mumps->sym = 2; 261359ac8732SStefano Zampini #else 26146fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 26156fdc2a6dSBarry Smith else mumps->sym = 2; 261659ac8732SStefano Zampini #endif 2617a214ac2aSShri Abhyankar 261800c67f3bSHong Zhang /* set solvertype */ 261900c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 262000c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 262100c67f3bSHong Zhang 2622f3c0ef26SHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2623e69c285eSBarry Smith B->data = (void*)mumps; 26242205254eSKarl Rupp 2625f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2626746480a1SHong Zhang 26272877fffaSHong Zhang *F = B; 26282877fffaSHong Zhang PetscFunctionReturn(0); 26292877fffaSHong Zhang } 263097969023SHong Zhang 2631cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_baij_mumps(Mat A,MatFactorType ftype,Mat *F) 263267877ebaSShri Abhyankar { 263367877ebaSShri Abhyankar Mat B; 263467877ebaSShri Abhyankar PetscErrorCode ierr; 263567877ebaSShri Abhyankar Mat_MUMPS *mumps; 2636ace3abfcSBarry Smith PetscBool isSeqBAIJ; 263767877ebaSShri Abhyankar 263867877ebaSShri Abhyankar PetscFunctionBegin; 263967877ebaSShri Abhyankar /* Create the factorization matrix */ 2640251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&isSeqBAIJ);CHKERRQ(ierr); 2641ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 264267877ebaSShri Abhyankar ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2643e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2644e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2645450b117fSShri Abhyankar 2646b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2647450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2648450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_BAIJMUMPS; 2649450b117fSShri Abhyankar B->factortype = MAT_FACTOR_LU; 2650bccb9932SShri Abhyankar if (isSeqBAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqbaij_seqaij; 2651bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpibaij_mpiaij; 2652746480a1SHong Zhang mumps->sym = 0; 2653f23aa3ddSBarry Smith } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc BAIJ matrices with MUMPS Cholesky, use SBAIJ or AIJ matrix instead\n"); 2654bccb9932SShri Abhyankar 2655e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 2656450b117fSShri Abhyankar B->ops->view = MatView_MUMPS; 26572205254eSKarl Rupp 26583ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 26595a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 26605a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2661bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2662bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2663bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2664bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2665ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2666ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2667ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2668ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 266989a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2670eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 2671450b117fSShri Abhyankar 267200c67f3bSHong Zhang /* set solvertype */ 267300c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 267400c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 267500c67f3bSHong Zhang 26767ee00b23SStefano Zampini B->ops->destroy = MatDestroy_MUMPS; 26777ee00b23SStefano Zampini B->data = (void*)mumps; 26787ee00b23SStefano Zampini 26797ee00b23SStefano Zampini ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 26807ee00b23SStefano Zampini 26817ee00b23SStefano Zampini *F = B; 26827ee00b23SStefano Zampini PetscFunctionReturn(0); 26837ee00b23SStefano Zampini } 26847ee00b23SStefano Zampini 26857ee00b23SStefano Zampini /* MatGetFactor for Seq and MPI SELL matrices */ 26867ee00b23SStefano Zampini static PetscErrorCode MatGetFactor_sell_mumps(Mat A,MatFactorType ftype,Mat *F) 26877ee00b23SStefano Zampini { 26887ee00b23SStefano Zampini Mat B; 26897ee00b23SStefano Zampini PetscErrorCode ierr; 26907ee00b23SStefano Zampini Mat_MUMPS *mumps; 26917ee00b23SStefano Zampini PetscBool isSeqSELL; 26927ee00b23SStefano Zampini 26937ee00b23SStefano Zampini PetscFunctionBegin; 26947ee00b23SStefano Zampini /* Create the factorization matrix */ 26957ee00b23SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSELL,&isSeqSELL);CHKERRQ(ierr); 26967ee00b23SStefano Zampini ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 26977ee00b23SStefano Zampini ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 26987ee00b23SStefano Zampini ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 26997ee00b23SStefano Zampini ierr = MatSetUp(B);CHKERRQ(ierr); 27007ee00b23SStefano Zampini 27017ee00b23SStefano Zampini ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 27027ee00b23SStefano Zampini 27037ee00b23SStefano Zampini B->ops->view = MatView_MUMPS; 27047ee00b23SStefano Zampini B->ops->getinfo = MatGetInfo_MUMPS; 27057ee00b23SStefano Zampini 27067ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 27077ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 27087ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 27097ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 27107ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 27117ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 27127ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 27137ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 27147ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 27157ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 27167ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 27177ee00b23SStefano Zampini 27187ee00b23SStefano Zampini if (ftype == MAT_FACTOR_LU) { 27197ee00b23SStefano Zampini B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 27207ee00b23SStefano Zampini B->factortype = MAT_FACTOR_LU; 27217ee00b23SStefano Zampini if (isSeqSELL) mumps->ConvertToTriples = MatConvertToTriples_seqsell_seqaij; 27227ee00b23SStefano Zampini else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 27237ee00b23SStefano Zampini mumps->sym = 0; 27247ee00b23SStefano Zampini } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 27257ee00b23SStefano Zampini 27267ee00b23SStefano Zampini /* set solvertype */ 27277ee00b23SStefano Zampini ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 27287ee00b23SStefano Zampini ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 27297ee00b23SStefano Zampini 2730450b117fSShri Abhyankar B->ops->destroy = MatDestroy_MUMPS; 2731e69c285eSBarry Smith B->data = (void*)mumps; 27322205254eSKarl Rupp 2733f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2734746480a1SHong Zhang 2735450b117fSShri Abhyankar *F = B; 2736450b117fSShri Abhyankar PetscFunctionReturn(0); 2737450b117fSShri Abhyankar } 273842c9c57cSBarry Smith 27393ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_MUMPS(void) 274042c9c57cSBarry Smith { 274142c9c57cSBarry Smith PetscErrorCode ierr; 274242c9c57cSBarry Smith 274342c9c57cSBarry Smith PetscFunctionBegin; 27443ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27453ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27463ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27473ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27483ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPISBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 27493ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27503ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27513ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27523ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27533ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 27547ee00b23SStefano Zampini ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSELL,MAT_FACTOR_LU,MatGetFactor_sell_mumps);CHKERRQ(ierr); 275542c9c57cSBarry Smith PetscFunctionReturn(0); 275642c9c57cSBarry Smith } 275742c9c57cSBarry Smith 2758