1397b6df1SKris Buschelman /*$Id: mumps.c,v 1.10 2001/08/15 15:56:50 bsmith Exp $*/ 2397b6df1SKris Buschelman /* 3a58c3f20SHong Zhang Provides an interface to the MUMPS_4.3.1 sparse solver 4397b6df1SKris Buschelman */ 5397b6df1SKris Buschelman #include "src/mat/impls/aij/seq/aij.h" 6397b6df1SKris Buschelman #include "src/mat/impls/aij/mpi/mpiaij.h" 7397b6df1SKris Buschelman #include "src/mat/impls/sbaij/seq/sbaij.h" 8397b6df1SKris Buschelman #include "src/mat/impls/sbaij/mpi/mpisbaij.h" 9397b6df1SKris Buschelman 10397b6df1SKris Buschelman EXTERN_C_BEGIN 11397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 12397b6df1SKris Buschelman #include "zmumps_c.h" 13397b6df1SKris Buschelman #else 14397b6df1SKris Buschelman #include "dmumps_c.h" 15397b6df1SKris Buschelman #endif 16397b6df1SKris Buschelman EXTERN_C_END 17397b6df1SKris Buschelman #define JOB_INIT -1 18397b6df1SKris Buschelman #define JOB_END -2 19397b6df1SKris Buschelman /* macros s.t. indices match MUMPS documentation */ 20397b6df1SKris Buschelman #define ICNTL(I) icntl[(I)-1] 21397b6df1SKris Buschelman #define CNTL(I) cntl[(I)-1] 22397b6df1SKris Buschelman #define INFOG(I) infog[(I)-1] 23a7aca84bSHong Zhang #define INFO(I) info[(I)-1] 24397b6df1SKris Buschelman #define RINFOG(I) rinfog[(I)-1] 25adc1d99fSHong Zhang #define RINFO(I) rinfo[(I)-1] 26397b6df1SKris Buschelman 27397b6df1SKris Buschelman typedef struct { 28397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 29397b6df1SKris Buschelman ZMUMPS_STRUC_C id; 30397b6df1SKris Buschelman #else 31397b6df1SKris Buschelman DMUMPS_STRUC_C id; 32397b6df1SKris Buschelman #endif 33397b6df1SKris Buschelman MatStructure matstruc; 34397b6df1SKris Buschelman int myid,size,*irn,*jcn,sym; 35397b6df1SKris Buschelman PetscScalar *val; 36397b6df1SKris Buschelman MPI_Comm comm_mumps; 37397b6df1SKris Buschelman 38c338a77dSKris Buschelman PetscTruth isAIJ,CleanUpMUMPS; 39f0c56d0fSKris Buschelman int (*MatDuplicate)(Mat,MatDuplicateOption,Mat*); 40c338a77dSKris Buschelman int (*MatView)(Mat,PetscViewer); 41c338a77dSKris Buschelman int (*MatAssemblyEnd)(Mat,MatAssemblyType); 42c338a77dSKris Buschelman int (*MatLUFactorSymbolic)(Mat,IS,IS,MatFactorInfo*,Mat*); 43c338a77dSKris Buschelman int (*MatCholeskyFactorSymbolic)(Mat,IS,MatFactorInfo*,Mat*); 44c338a77dSKris Buschelman int (*MatDestroy)(Mat); 45a39386dcSKris Buschelman int (*specialdestroy)(Mat); 46*9c097c71SKris Buschelman int (*MatPreallocate)(Mat,int,int,int*,int,int*); 47f0c56d0fSKris Buschelman } Mat_MUMPS; 48f0c56d0fSKris Buschelman 49f0c56d0fSKris Buschelman EXTERN int MatDuplicate_AIJMUMPS(Mat,MatDuplicateOption,Mat*); 50f0c56d0fSKris Buschelman EXTERN int MatDuplicate_SBAIJMUMPS(Mat,MatDuplicateOption,Mat*); 51*9c097c71SKris Buschelman EXTERN int MatConvert_SBAIJ_SBAIJMUMPS(Mat,const MatType,Mat*); 52397b6df1SKris Buschelman /* convert Petsc mpiaij matrix to triples: row[nz], col[nz], val[nz] */ 53397b6df1SKris Buschelman /* 54397b6df1SKris Buschelman input: 5575747be1SHong Zhang A - matrix in mpiaij or mpisbaij (bs=1) format 56397b6df1SKris Buschelman shift - 0: C style output triple; 1: Fortran style output triple. 57397b6df1SKris Buschelman valOnly - FALSE: spaces are allocated and values are set for the triple 58397b6df1SKris Buschelman TRUE: only the values in v array are updated 59397b6df1SKris Buschelman output: 60397b6df1SKris Buschelman nnz - dim of r, c, and v (number of local nonzero entries of A) 61397b6df1SKris Buschelman r, c, v - row and col index, matrix values (matrix triples) 62397b6df1SKris Buschelman */ 63f0c56d0fSKris Buschelman int MatConvertToTriples(Mat A,int shift,PetscTruth valOnly,int *nnz,int **r, int **c, PetscScalar **v) { 64397b6df1SKris Buschelman int *ai, *aj, *bi, *bj, rstart,nz, *garray; 65397b6df1SKris Buschelman int ierr,i,j,jj,jB,irow,m=A->m,*ajj,*bjj,countA,countB,colA_start,jcol; 66d54de34fSKris Buschelman int *row,*col; 67397b6df1SKris Buschelman PetscScalar *av, *bv,*val; 68f0c56d0fSKris Buschelman Mat_MUMPS *mumps=(Mat_MUMPS*)A->spptr; 69397b6df1SKris Buschelman 70397b6df1SKris Buschelman PetscFunctionBegin; 71397b6df1SKris Buschelman if (mumps->isAIJ){ 72397b6df1SKris Buschelman Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 73397b6df1SKris Buschelman Mat_SeqAIJ *aa=(Mat_SeqAIJ*)(mat->A)->data; 74397b6df1SKris Buschelman Mat_SeqAIJ *bb=(Mat_SeqAIJ*)(mat->B)->data; 75397b6df1SKris Buschelman nz = aa->nz + bb->nz; 76397b6df1SKris Buschelman ai=aa->i; aj=aa->j; bi=bb->i; bj=bb->j; rstart= mat->rstart; 77397b6df1SKris Buschelman garray = mat->garray; 78397b6df1SKris Buschelman av=aa->a; bv=bb->a; 79397b6df1SKris Buschelman 80397b6df1SKris Buschelman } else { 81397b6df1SKris Buschelman Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)A->data; 82397b6df1SKris Buschelman Mat_SeqSBAIJ *aa=(Mat_SeqSBAIJ*)(mat->A)->data; 83397b6df1SKris Buschelman Mat_SeqBAIJ *bb=(Mat_SeqBAIJ*)(mat->B)->data; 84847143adSKris Buschelman if (mat->bs > 1) SETERRQ1(PETSC_ERR_SUP," bs=%d is not supported yet\n", mat->bs); 856c6c5352SBarry Smith nz = aa->nz + bb->nz; 86397b6df1SKris Buschelman ai=aa->i; aj=aa->j; bi=bb->i; bj=bb->j; rstart= mat->rstart; 87397b6df1SKris Buschelman garray = mat->garray; 88397b6df1SKris Buschelman av=aa->a; bv=bb->a; 89397b6df1SKris Buschelman } 90397b6df1SKris Buschelman 91397b6df1SKris Buschelman if (!valOnly){ 92397b6df1SKris Buschelman ierr = PetscMalloc(nz*sizeof(int),&row);CHKERRQ(ierr); 93397b6df1SKris Buschelman ierr = PetscMalloc(nz*sizeof(int),&col);CHKERRQ(ierr); 94397b6df1SKris Buschelman ierr = PetscMalloc(nz*sizeof(PetscScalar),&val);CHKERRQ(ierr); 95397b6df1SKris Buschelman *r = row; *c = col; *v = val; 96397b6df1SKris Buschelman } else { 97397b6df1SKris Buschelman row = *r; col = *c; val = *v; 98397b6df1SKris Buschelman } 99397b6df1SKris Buschelman *nnz = nz; 100397b6df1SKris Buschelman 101028e57e8SHong Zhang jj = 0; irow = rstart; 102397b6df1SKris Buschelman for ( i=0; i<m; i++ ) { 103397b6df1SKris Buschelman ajj = aj + ai[i]; /* ptr to the beginning of this row */ 104397b6df1SKris Buschelman countA = ai[i+1] - ai[i]; 105397b6df1SKris Buschelman countB = bi[i+1] - bi[i]; 106397b6df1SKris Buschelman bjj = bj + bi[i]; 107397b6df1SKris Buschelman 108397b6df1SKris Buschelman /* get jB, the starting local col index for the 2nd B-part */ 109397b6df1SKris Buschelman colA_start = rstart + ajj[0]; /* the smallest col index for A */ 11075747be1SHong Zhang j=-1; 11175747be1SHong Zhang do { 11275747be1SHong Zhang j++; 11375747be1SHong Zhang if (j == countB) break; 114397b6df1SKris Buschelman jcol = garray[bjj[j]]; 11575747be1SHong Zhang } while (jcol < colA_start); 11675747be1SHong Zhang jB = j; 117397b6df1SKris Buschelman 118397b6df1SKris Buschelman /* B-part, smaller col index */ 119397b6df1SKris Buschelman colA_start = rstart + ajj[0]; /* the smallest col index for A */ 120397b6df1SKris Buschelman for (j=0; j<jB; j++){ 121397b6df1SKris Buschelman jcol = garray[bjj[j]]; 122397b6df1SKris Buschelman if (!valOnly){ 123397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = jcol + shift; 12475747be1SHong Zhang 125397b6df1SKris Buschelman } 126397b6df1SKris Buschelman val[jj++] = *bv++; 127397b6df1SKris Buschelman } 128397b6df1SKris Buschelman /* A-part */ 129397b6df1SKris Buschelman for (j=0; j<countA; j++){ 130397b6df1SKris Buschelman if (!valOnly){ 131397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 132397b6df1SKris Buschelman } 133397b6df1SKris Buschelman val[jj++] = *av++; 134397b6df1SKris Buschelman } 135397b6df1SKris Buschelman /* B-part, larger col index */ 136397b6df1SKris Buschelman for (j=jB; j<countB; j++){ 137397b6df1SKris Buschelman if (!valOnly){ 138397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 139397b6df1SKris Buschelman } 140397b6df1SKris Buschelman val[jj++] = *bv++; 141397b6df1SKris Buschelman } 142397b6df1SKris Buschelman irow++; 143397b6df1SKris Buschelman } 144397b6df1SKris Buschelman 145397b6df1SKris Buschelman PetscFunctionReturn(0); 146397b6df1SKris Buschelman } 147397b6df1SKris Buschelman 148c338a77dSKris Buschelman EXTERN_C_BEGIN 149c338a77dSKris Buschelman #undef __FUNCT__ 150c338a77dSKris Buschelman #define __FUNCT__ "MatConvert_MUMPS_Base" 1518e9aea5cSBarry Smith int MatConvert_MUMPS_Base(Mat A,const MatType type,Mat *newmat) { 152c338a77dSKris Buschelman int ierr; 153c338a77dSKris Buschelman Mat B=*newmat; 154f0c56d0fSKris Buschelman Mat_MUMPS *mumps=(Mat_MUMPS*)A->spptr; 155c338a77dSKris Buschelman 156c338a77dSKris Buschelman PetscFunctionBegin; 157c338a77dSKris Buschelman if (B != A) { 158c338a77dSKris Buschelman ierr = MatDuplicate(A,MAT_COPY_VALUES,&B);CHKERRQ(ierr); 159c338a77dSKris Buschelman } 160f0c56d0fSKris Buschelman B->ops->duplicate = mumps->MatDuplicate; 161f0c56d0fSKris Buschelman B->ops->view = mumps->MatView; 162f0c56d0fSKris Buschelman B->ops->assemblyend = mumps->MatAssemblyEnd; 163f0c56d0fSKris Buschelman B->ops->lufactorsymbolic = mumps->MatLUFactorSymbolic; 164f0c56d0fSKris Buschelman B->ops->choleskyfactorsymbolic = mumps->MatCholeskyFactorSymbolic; 165f0c56d0fSKris Buschelman B->ops->destroy = mumps->MatDestroy; 1663924e44cSKris Buschelman ierr = PetscObjectChangeTypeName((PetscObject)B,type);CHKERRQ(ierr); 167f0c56d0fSKris Buschelman ierr = PetscFree(mumps);CHKERRQ(ierr); 168c338a77dSKris Buschelman *newmat = B; 169c338a77dSKris Buschelman PetscFunctionReturn(0); 170c338a77dSKris Buschelman } 171c338a77dSKris Buschelman EXTERN_C_END 172c338a77dSKris Buschelman 173397b6df1SKris Buschelman #undef __FUNCT__ 1743924e44cSKris Buschelman #define __FUNCT__ "MatDestroy_MUMPS" 1753924e44cSKris Buschelman int MatDestroy_MUMPS(Mat A) { 176f0c56d0fSKris Buschelman Mat_MUMPS *lu=(Mat_MUMPS*)A->spptr; 177c338a77dSKris Buschelman int ierr,size=lu->size; 178a39386dcSKris Buschelman int (*specialdestroy)(Mat); 179397b6df1SKris Buschelman PetscFunctionBegin; 180397b6df1SKris Buschelman if (lu->CleanUpMUMPS) { 181397b6df1SKris Buschelman /* Terminate instance, deallocate memories */ 182397b6df1SKris Buschelman lu->id.job=JOB_END; 183397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 184397b6df1SKris Buschelman zmumps_c(&lu->id); 185397b6df1SKris Buschelman #else 186397b6df1SKris Buschelman dmumps_c(&lu->id); 187397b6df1SKris Buschelman #endif 188c338a77dSKris Buschelman if (lu->irn) { 189c338a77dSKris Buschelman ierr = PetscFree(lu->irn);CHKERRQ(ierr); 190c338a77dSKris Buschelman } 191c338a77dSKris Buschelman if (lu->jcn) { 192c338a77dSKris Buschelman ierr = PetscFree(lu->jcn);CHKERRQ(ierr); 193c338a77dSKris Buschelman } 194c338a77dSKris Buschelman if (size>1 && lu->val) { 195c338a77dSKris Buschelman ierr = PetscFree(lu->val);CHKERRQ(ierr); 196c338a77dSKris Buschelman } 197397b6df1SKris Buschelman ierr = MPI_Comm_free(&(lu->comm_mumps));CHKERRQ(ierr); 198397b6df1SKris Buschelman } 199a39386dcSKris Buschelman specialdestroy = lu->specialdestroy; 200a39386dcSKris Buschelman ierr = (*specialdestroy)(A);CHKERRQ(ierr); 201c338a77dSKris Buschelman ierr = (*A->ops->destroy)(A);CHKERRQ(ierr); 202397b6df1SKris Buschelman PetscFunctionReturn(0); 203397b6df1SKris Buschelman } 204397b6df1SKris Buschelman 205397b6df1SKris Buschelman #undef __FUNCT__ 206a39386dcSKris Buschelman #define __FUNCT__ "MatDestroy_AIJMUMPS" 207a39386dcSKris Buschelman int MatDestroy_AIJMUMPS(Mat A) { 208a39386dcSKris Buschelman int ierr, size; 209a39386dcSKris Buschelman 210a39386dcSKris Buschelman PetscFunctionBegin; 211a39386dcSKris Buschelman ierr = MPI_Comm_size(A->comm,&size);CHKERRQ(ierr); 212a39386dcSKris Buschelman if (size==1) { 213a39386dcSKris Buschelman ierr = MatConvert_MUMPS_Base(A,MATSEQAIJ,&A);CHKERRQ(ierr); 214a39386dcSKris Buschelman } else { 215a39386dcSKris Buschelman ierr = MatConvert_MUMPS_Base(A,MATMPIAIJ,&A);CHKERRQ(ierr); 216a39386dcSKris Buschelman } 217a39386dcSKris Buschelman PetscFunctionReturn(0); 218a39386dcSKris Buschelman } 219a39386dcSKris Buschelman 220a39386dcSKris Buschelman #undef __FUNCT__ 221a39386dcSKris Buschelman #define __FUNCT__ "MatDestroy_SBAIJMUMPS" 222a39386dcSKris Buschelman int MatDestroy_SBAIJMUMPS(Mat A) { 223a39386dcSKris Buschelman int ierr, size; 224a39386dcSKris Buschelman 225a39386dcSKris Buschelman PetscFunctionBegin; 226a39386dcSKris Buschelman ierr = MPI_Comm_size(A->comm,&size);CHKERRQ(ierr); 227a39386dcSKris Buschelman if (size==1) { 228a39386dcSKris Buschelman ierr = MatConvert_MUMPS_Base(A,MATSEQSBAIJ,&A);CHKERRQ(ierr); 229a39386dcSKris Buschelman } else { 230a39386dcSKris Buschelman ierr = MatConvert_MUMPS_Base(A,MATMPISBAIJ,&A);CHKERRQ(ierr); 231a39386dcSKris Buschelman } 232a39386dcSKris Buschelman PetscFunctionReturn(0); 233a39386dcSKris Buschelman } 234a39386dcSKris Buschelman 235a39386dcSKris Buschelman #undef __FUNCT__ 236c338a77dSKris Buschelman #define __FUNCT__ "MatFactorInfo_MUMPS" 237f0c56d0fSKris Buschelman int MatFactorInfo_MUMPS(Mat A,PetscViewer viewer) { 238f0c56d0fSKris Buschelman Mat_MUMPS *lu=(Mat_MUMPS*)A->spptr; 239397b6df1SKris Buschelman int ierr; 240397b6df1SKris Buschelman 241397b6df1SKris Buschelman PetscFunctionBegin; 242c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer,"MUMPS run parameters:\n");CHKERRQ(ierr); 243c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," SYM (matrix type): %d \n",lu->id.sym);CHKERRQ(ierr); 244c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," PAR (host participation): %d \n",lu->id.par);CHKERRQ(ierr); 245c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(4) (level of printing): %d \n",lu->id.ICNTL(4));CHKERRQ(ierr); 246c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(5) (input mat struct): %d \n",lu->id.ICNTL(5));CHKERRQ(ierr); 247c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(6) (matrix prescaling): %d \n",lu->id.ICNTL(6));CHKERRQ(ierr); 248c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(7) (matrix ordering): %d \n",lu->id.ICNTL(7));CHKERRQ(ierr); 249c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(9) (A/A^T x=b is solved): %d \n",lu->id.ICNTL(9));CHKERRQ(ierr); 250c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(10) (max num of refinements): %d \n",lu->id.ICNTL(10));CHKERRQ(ierr); 251c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(11) (error analysis): %d \n",lu->id.ICNTL(11));CHKERRQ(ierr); 252c338a77dSKris Buschelman if (lu->myid == 0 && lu->id.ICNTL(11)>0) { 253c338a77dSKris Buschelman ierr = PetscPrintf(PETSC_COMM_SELF," RINFOG(4) (inf norm of input mat): %g\n",lu->id.RINFOG(4));CHKERRQ(ierr); 254c338a77dSKris Buschelman ierr = PetscPrintf(PETSC_COMM_SELF," RINFOG(5) (inf norm of solution): %g\n",lu->id.RINFOG(5));CHKERRQ(ierr); 255c338a77dSKris Buschelman ierr = PetscPrintf(PETSC_COMM_SELF," RINFOG(6) (inf norm of residual): %g\n",lu->id.RINFOG(6));CHKERRQ(ierr); 256c338a77dSKris Buschelman ierr = PetscPrintf(PETSC_COMM_SELF," RINFOG(7),RINFOG(8) (backward error est): %g, %g\n",lu->id.RINFOG(7),lu->id.RINFOG(8));CHKERRQ(ierr); 257c338a77dSKris Buschelman ierr = PetscPrintf(PETSC_COMM_SELF," RINFOG(9) (error estimate): %g \n",lu->id.RINFOG(9));CHKERRQ(ierr); 258c338a77dSKris Buschelman ierr = PetscPrintf(PETSC_COMM_SELF," RINFOG(10),RINFOG(11)(condition numbers): %g, %g\n",lu->id.RINFOG(10),lu->id.RINFOG(11));CHKERRQ(ierr); 259c338a77dSKris Buschelman 260c338a77dSKris Buschelman } 261c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(12) (efficiency control): %d \n",lu->id.ICNTL(12));CHKERRQ(ierr); 262c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(13) (efficiency control): %d \n",lu->id.ICNTL(13));CHKERRQ(ierr); 263adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(14) (percentage of estimated workspace increase): %d \n",lu->id.ICNTL(14));CHKERRQ(ierr); 264c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(15) (efficiency control): %d \n",lu->id.ICNTL(15));CHKERRQ(ierr); 265c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," ICNTL(18) (input mat struct): %d \n",lu->id.ICNTL(18));CHKERRQ(ierr); 266c338a77dSKris Buschelman 267c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," CNTL(1) (relative pivoting threshold): %g \n",lu->id.CNTL(1));CHKERRQ(ierr); 268c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," CNTL(2) (stopping criterion of refinement): %g \n",lu->id.CNTL(2));CHKERRQ(ierr); 269c338a77dSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," CNTL(3) (absolute pivoting threshold): %g \n",lu->id.CNTL(3));CHKERRQ(ierr); 27057f0c58bSHong Zhang 27157f0c58bSHong Zhang /* infomation local to each processor */ 27257f0c58bSHong Zhang if (lu->myid == 0) ierr = PetscPrintf(PETSC_COMM_SELF, " RINFO(1) (local estimated flops for the elimination after analysis): \n");CHKERRQ(ierr); 27357f0c58bSHong Zhang ierr = PetscSynchronizedPrintf(A->comm," [%d] %g \n",lu->myid,lu->id.RINFO(1));CHKERRQ(ierr); 27457f0c58bSHong Zhang ierr = PetscSynchronizedFlush(A->comm); 27557f0c58bSHong Zhang if (lu->myid == 0) ierr = PetscPrintf(PETSC_COMM_SELF, " RINFO(2) (local estimated flops for the assembly after factorization): \n");CHKERRQ(ierr); 27657f0c58bSHong Zhang ierr = PetscSynchronizedPrintf(A->comm," [%d] %g \n",lu->myid,lu->id.RINFO(2));CHKERRQ(ierr); 27757f0c58bSHong Zhang ierr = PetscSynchronizedFlush(A->comm); 27857f0c58bSHong Zhang if (lu->myid == 0) ierr = PetscPrintf(PETSC_COMM_SELF, " RINFO(3) (local estimated flops for the elimination after factorization): \n");CHKERRQ(ierr); 27957f0c58bSHong Zhang ierr = PetscSynchronizedPrintf(A->comm," [%d] %g \n",lu->myid,lu->id.RINFO(3));CHKERRQ(ierr); 28057f0c58bSHong Zhang ierr = PetscSynchronizedFlush(A->comm); 281adc1d99fSHong Zhang 282adc1d99fSHong Zhang if (lu->myid == 0){ /* information from the host */ 283adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(1) (global estimated flops for the elimination after analysis): %g \n",lu->id.RINFOG(1));CHKERRQ(ierr); 284adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(2) (global estimated flops for the assembly after factorization): %g \n",lu->id.RINFOG(2));CHKERRQ(ierr); 285adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(3) (global estimated flops for the elimination after factorization): %g \n",lu->id.RINFOG(3));CHKERRQ(ierr); 286adc1d99fSHong Zhang 287adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(3) (estimated real workspace for factors on all processors after analysis): %d \n",lu->id.INFOG(3));CHKERRQ(ierr); 288adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(4) (estimated integer workspace for factors on all processors after analysis): %d \n",lu->id.INFOG(4));CHKERRQ(ierr); 289adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(5) (estimated maximum front size in the complete tree): %d \n",lu->id.INFOG(5));CHKERRQ(ierr); 290adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(6) (number of nodes in the complete tree): %d \n",lu->id.INFOG(6));CHKERRQ(ierr); 291adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(7) (ordering option effectively uese after analysis): %d \n",lu->id.INFOG(7));CHKERRQ(ierr); 292adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(8) (structural symmetry in percent of the permuted matrix after analysis): %d \n",lu->id.INFOG(8));CHKERRQ(ierr); 293adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(9) (total real space store the matrix factors after analysis): %d \n",lu->id.INFOG(9));CHKERRQ(ierr); 294adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(10) (total integer space store the matrix factors after analysis): %d \n",lu->id.INFOG(10));CHKERRQ(ierr); 295adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(11) (order of largest frontal matrix): %d \n",lu->id.INFOG(11));CHKERRQ(ierr); 296adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(12) (number of off-diagonal pivots): %d \n",lu->id.INFOG(12));CHKERRQ(ierr); 297adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(13) (number of delayed pivots after factorization): %d \n",lu->id.INFOG(13));CHKERRQ(ierr); 298adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(14) (number of memory compress after factorization): %d \n",lu->id.INFOG(14));CHKERRQ(ierr); 299adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(15) (number of steps of iterative refinement after solution): %d \n",lu->id.INFOG(15));CHKERRQ(ierr); 300adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(16) (estimated size (in million of bytes) of all MUMPS internal data for factorization after analysis: value on the most memory consuming processor): %d \n",lu->id.INFOG(16));CHKERRQ(ierr); 301adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(17) (estimated size of all MUMPS internal data for factorization after analysis: sum over all processors): %d \n",lu->id.INFOG(17));CHKERRQ(ierr); 302adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(18) (size of all MUMPS internal data allocated during factorization: value on the most memory consuming processor): %d \n",lu->id.INFOG(18));CHKERRQ(ierr); 303adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(19) (size of all MUMPS internal data allocated during factorization: sum over all processors): %d \n",lu->id.INFOG(19));CHKERRQ(ierr); 304adc1d99fSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(20) (estimated number of entries in the factors): %d \n",lu->id.INFOG(20));CHKERRQ(ierr); 305adc1d99fSHong Zhang } 306adc1d99fSHong Zhang 307397b6df1SKris Buschelman PetscFunctionReturn(0); 308397b6df1SKris Buschelman } 309397b6df1SKris Buschelman 310397b6df1SKris Buschelman #undef __FUNCT__ 311f0c56d0fSKris Buschelman #define __FUNCT__ "MatView_AIJMUMPS" 312f0c56d0fSKris Buschelman int MatView_AIJMUMPS(Mat A,PetscViewer viewer) { 313397b6df1SKris Buschelman int ierr; 314397b6df1SKris Buschelman PetscTruth isascii; 315397b6df1SKris Buschelman PetscViewerFormat format; 316f0c56d0fSKris Buschelman Mat_MUMPS *mumps=(Mat_MUMPS*)(A->spptr); 317397b6df1SKris Buschelman 318397b6df1SKris Buschelman PetscFunctionBegin; 319397b6df1SKris Buschelman ierr = (*mumps->MatView)(A,viewer);CHKERRQ(ierr); 320397b6df1SKris Buschelman 321397b6df1SKris Buschelman ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr); 322397b6df1SKris Buschelman if (isascii) { 323397b6df1SKris Buschelman ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 324397b6df1SKris Buschelman if (format == PETSC_VIEWER_ASCII_FACTOR_INFO) { 325397b6df1SKris Buschelman ierr = MatFactorInfo_MUMPS(A,viewer);CHKERRQ(ierr); 326397b6df1SKris Buschelman } 327397b6df1SKris Buschelman } 328397b6df1SKris Buschelman PetscFunctionReturn(0); 329397b6df1SKris Buschelman } 330397b6df1SKris Buschelman 331397b6df1SKris Buschelman #undef __FUNCT__ 332f0c56d0fSKris Buschelman #define __FUNCT__ "MatSolve_AIJMUMPS" 333f0c56d0fSKris Buschelman int MatSolve_AIJMUMPS(Mat A,Vec b,Vec x) { 334f0c56d0fSKris Buschelman Mat_MUMPS *lu=(Mat_MUMPS*)A->spptr; 335d54de34fSKris Buschelman PetscScalar *array; 336397b6df1SKris Buschelman Vec x_seq; 337397b6df1SKris Buschelman IS iden; 338397b6df1SKris Buschelman VecScatter scat; 339397b6df1SKris Buschelman int ierr; 340397b6df1SKris Buschelman 341397b6df1SKris Buschelman PetscFunctionBegin; 342397b6df1SKris Buschelman if (lu->size > 1){ 343397b6df1SKris Buschelman if (!lu->myid){ 344397b6df1SKris Buschelman ierr = VecCreateSeq(PETSC_COMM_SELF,A->N,&x_seq);CHKERRQ(ierr); 345397b6df1SKris Buschelman ierr = ISCreateStride(PETSC_COMM_SELF,A->N,0,1,&iden);CHKERRQ(ierr); 346397b6df1SKris Buschelman } else { 347397b6df1SKris Buschelman ierr = VecCreateSeq(PETSC_COMM_SELF,0,&x_seq);CHKERRQ(ierr); 348397b6df1SKris Buschelman ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&iden);CHKERRQ(ierr); 349397b6df1SKris Buschelman } 350397b6df1SKris Buschelman ierr = VecScatterCreate(b,iden,x_seq,iden,&scat);CHKERRQ(ierr); 351397b6df1SKris Buschelman ierr = ISDestroy(iden);CHKERRQ(ierr); 352397b6df1SKris Buschelman 353397b6df1SKris Buschelman ierr = VecScatterBegin(b,x_seq,INSERT_VALUES,SCATTER_FORWARD,scat);CHKERRQ(ierr); 354397b6df1SKris Buschelman ierr = VecScatterEnd(b,x_seq,INSERT_VALUES,SCATTER_FORWARD,scat);CHKERRQ(ierr); 355397b6df1SKris Buschelman if (!lu->myid) {ierr = VecGetArray(x_seq,&array);CHKERRQ(ierr);} 356397b6df1SKris Buschelman } else { /* size == 1 */ 357397b6df1SKris Buschelman ierr = VecCopy(b,x);CHKERRQ(ierr); 358397b6df1SKris Buschelman ierr = VecGetArray(x,&array);CHKERRQ(ierr); 359397b6df1SKris Buschelman } 360397b6df1SKris Buschelman if (!lu->myid) { /* define rhs on the host */ 361397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 362397b6df1SKris Buschelman lu->id.rhs = (mumps_double_complex*)array; 363397b6df1SKris Buschelman #else 364397b6df1SKris Buschelman lu->id.rhs = array; 365397b6df1SKris Buschelman #endif 366397b6df1SKris Buschelman } 367397b6df1SKris Buschelman 368397b6df1SKris Buschelman /* solve phase */ 369397b6df1SKris Buschelman lu->id.job=3; 370397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 371397b6df1SKris Buschelman zmumps_c(&lu->id); 372397b6df1SKris Buschelman #else 373397b6df1SKris Buschelman dmumps_c(&lu->id); 374397b6df1SKris Buschelman #endif 375397b6df1SKris Buschelman if (lu->id.INFOG(1) < 0) { 376397b6df1SKris Buschelman SETERRQ1(1,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",lu->id.INFOG(1)); 377397b6df1SKris Buschelman } 378397b6df1SKris Buschelman 379397b6df1SKris Buschelman /* convert mumps solution x_seq to petsc mpi x */ 380397b6df1SKris Buschelman if (lu->size > 1) { 381397b6df1SKris Buschelman if (!lu->myid){ 382397b6df1SKris Buschelman ierr = VecRestoreArray(x_seq,&array);CHKERRQ(ierr); 383397b6df1SKris Buschelman } 384397b6df1SKris Buschelman ierr = VecScatterBegin(x_seq,x,INSERT_VALUES,SCATTER_REVERSE,scat);CHKERRQ(ierr); 385397b6df1SKris Buschelman ierr = VecScatterEnd(x_seq,x,INSERT_VALUES,SCATTER_REVERSE,scat);CHKERRQ(ierr); 386397b6df1SKris Buschelman ierr = VecScatterDestroy(scat);CHKERRQ(ierr); 387397b6df1SKris Buschelman ierr = VecDestroy(x_seq);CHKERRQ(ierr); 388397b6df1SKris Buschelman } else { 389397b6df1SKris Buschelman ierr = VecRestoreArray(x,&array);CHKERRQ(ierr); 390397b6df1SKris Buschelman } 391397b6df1SKris Buschelman 392397b6df1SKris Buschelman PetscFunctionReturn(0); 393397b6df1SKris Buschelman } 394397b6df1SKris Buschelman 395a58c3f20SHong Zhang /* 396a58c3f20SHong Zhang input: 397a58c3f20SHong Zhang F: numeric factor 398a58c3f20SHong Zhang output: 399a58c3f20SHong Zhang nneg: total number of negative pivots 400a58c3f20SHong Zhang nzero: 0 401a58c3f20SHong Zhang npos: (global dimension of F) - nneg 402a58c3f20SHong Zhang */ 403a58c3f20SHong Zhang 404a58c3f20SHong Zhang #undef __FUNCT__ 405a58c3f20SHong Zhang #define __FUNCT__ "MatGetInertia_SBAIJMUMPS" 406a58c3f20SHong Zhang int MatGetInertia_SBAIJMUMPS(Mat F,int *nneg,int *nzero,int *npos) 407a58c3f20SHong Zhang { 408a58c3f20SHong Zhang Mat_MUMPS *lu =(Mat_MUMPS*)F->spptr; 409bcb30aebSHong Zhang int ierr,neg,zero,pos,size; 410a58c3f20SHong Zhang 411a58c3f20SHong Zhang PetscFunctionBegin; 412bcb30aebSHong Zhang ierr = MPI_Comm_size(F->comm,&size);CHKERRQ(ierr); 413bcb30aebSHong Zhang /* MUMPS 4.3.1 calls ScaLAPACK when ICNTL(13)=0 (default), which does not offer the possibility to compute the inertia of a dense matrix. Set ICNTL(13)=1 to skip ScaLAPACK */ 414bcb30aebSHong Zhang if (size > 1 && lu->id.ICNTL(13) != 1){ 415bcb30aebSHong Zhang SETERRQ1(1,"ICNTL(13)=%d. -mat_mumps_icntl_13 must be set as 1 for correct global matrix inertia\n",lu->id.INFOG(13)); 416bcb30aebSHong Zhang } 417a58c3f20SHong Zhang if (nneg){ 418a58c3f20SHong Zhang if (!lu->myid){ 419a58c3f20SHong Zhang *nneg = lu->id.INFOG(12); 420a58c3f20SHong Zhang } 421bcb30aebSHong Zhang ierr = MPI_Bcast(nneg,1,MPI_INT,0,lu->comm_mumps);CHKERRQ(ierr); 422a58c3f20SHong Zhang } 423a58c3f20SHong Zhang if (nzero) *nzero = 0; 424a58c3f20SHong Zhang if (npos) *npos = F->M - (*nneg); 425a58c3f20SHong Zhang PetscFunctionReturn(0); 426a58c3f20SHong Zhang } 427a58c3f20SHong Zhang 428397b6df1SKris Buschelman #undef __FUNCT__ 429f0c56d0fSKris Buschelman #define __FUNCT__ "MatFactorNumeric_MPIAIJMUMPS" 430f0c56d0fSKris Buschelman int MatFactorNumeric_AIJMUMPS(Mat A,Mat *F) { 431f0c56d0fSKris Buschelman Mat_MUMPS *lu =(Mat_MUMPS*)(*F)->spptr; 432f0c56d0fSKris Buschelman Mat_MUMPS *lua=(Mat_MUMPS*)(A)->spptr; 433397b6df1SKris Buschelman int rnz,nnz,ierr,nz,i,M=A->M,*ai,*aj,icntl; 434397b6df1SKris Buschelman PetscTruth valOnly,flg; 435397b6df1SKris Buschelman 436397b6df1SKris Buschelman PetscFunctionBegin; 437397b6df1SKris Buschelman if (lu->matstruc == DIFFERENT_NONZERO_PATTERN){ 438f0c56d0fSKris Buschelman (*F)->ops->solve = MatSolve_AIJMUMPS; 439397b6df1SKris Buschelman 440397b6df1SKris Buschelman /* Initialize a MUMPS instance */ 441397b6df1SKris Buschelman ierr = MPI_Comm_rank(A->comm, &lu->myid); 442397b6df1SKris Buschelman ierr = MPI_Comm_size(A->comm,&lu->size);CHKERRQ(ierr); 44375747be1SHong Zhang lua->myid = lu->myid; lua->size = lu->size; 444397b6df1SKris Buschelman lu->id.job = JOB_INIT; 445397b6df1SKris Buschelman ierr = MPI_Comm_dup(A->comm,&(lu->comm_mumps));CHKERRQ(ierr); 446397b6df1SKris Buschelman lu->id.comm_fortran = lu->comm_mumps; 447397b6df1SKris Buschelman 448397b6df1SKris Buschelman /* Set mumps options */ 449397b6df1SKris Buschelman ierr = PetscOptionsBegin(A->comm,A->prefix,"MUMPS Options","Mat");CHKERRQ(ierr); 450397b6df1SKris Buschelman lu->id.par=1; /* host participates factorizaton and solve */ 451397b6df1SKris Buschelman lu->id.sym=lu->sym; 452397b6df1SKris Buschelman if (lu->sym == 2){ 453397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_sym","SYM: (1,2)","None",lu->id.sym,&icntl,&flg);CHKERRQ(ierr); 454397b6df1SKris Buschelman if (flg && icntl == 1) lu->id.sym=icntl; /* matrix is spd */ 455397b6df1SKris Buschelman } 456397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 457397b6df1SKris Buschelman zmumps_c(&lu->id); 458397b6df1SKris Buschelman #else 459397b6df1SKris Buschelman dmumps_c(&lu->id); 460397b6df1SKris Buschelman #endif 461397b6df1SKris Buschelman 462397b6df1SKris Buschelman if (lu->size == 1){ 463397b6df1SKris Buschelman lu->id.ICNTL(18) = 0; /* centralized assembled matrix input */ 464397b6df1SKris Buschelman } else { 465397b6df1SKris Buschelman lu->id.ICNTL(18) = 3; /* distributed assembled matrix input */ 466397b6df1SKris Buschelman } 467397b6df1SKris Buschelman 468397b6df1SKris Buschelman icntl=-1; 469397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_4","ICNTL(4): level of printing (0 to 4)","None",lu->id.ICNTL(4),&icntl,&flg);CHKERRQ(ierr); 470397b6df1SKris Buschelman if (flg && icntl > 0) { 471397b6df1SKris Buschelman lu->id.ICNTL(4)=icntl; /* and use mumps default icntl(i), i=1,2,3 */ 472397b6df1SKris Buschelman } else { /* no output */ 473397b6df1SKris Buschelman lu->id.ICNTL(1) = 0; /* error message, default= 6 */ 474397b6df1SKris Buschelman lu->id.ICNTL(2) = -1; /* output stream for diagnostic printing, statistics, and warning. default=0 */ 475397b6df1SKris Buschelman lu->id.ICNTL(3) = -1; /* output stream for global information, default=6 */ 476397b6df1SKris Buschelman lu->id.ICNTL(4) = 0; /* level of printing, 0,1,2,3,4, default=2 */ 477397b6df1SKris Buschelman } 478397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_6","ICNTL(6): matrix prescaling (0 to 7)","None",lu->id.ICNTL(6),&lu->id.ICNTL(6),PETSC_NULL);CHKERRQ(ierr); 479397b6df1SKris Buschelman icntl=-1; 480397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_7","ICNTL(7): matrix ordering (0 to 7)","None",lu->id.ICNTL(7),&icntl,&flg);CHKERRQ(ierr); 481397b6df1SKris Buschelman if (flg) { 482397b6df1SKris Buschelman if (icntl== 1){ 483397b6df1SKris Buschelman SETERRQ(PETSC_ERR_SUP,"pivot order be set by the user in PERM_IN -- not supported by the PETSc/MUMPS interface\n"); 484397b6df1SKris Buschelman } else { 485397b6df1SKris Buschelman lu->id.ICNTL(7) = icntl; 486397b6df1SKris Buschelman } 487397b6df1SKris Buschelman } 488397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_9","ICNTL(9): A or A^T x=b to be solved. 1: A; otherwise: A^T","None",lu->id.ICNTL(9),&lu->id.ICNTL(9),PETSC_NULL);CHKERRQ(ierr); 489397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_10","ICNTL(10): max num of refinements","None",lu->id.ICNTL(10),&lu->id.ICNTL(10),PETSC_NULL);CHKERRQ(ierr); 49094b7f48cSBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_11","ICNTL(11): error analysis, a positive value returns statistics (by -ksp_view)","None",lu->id.ICNTL(11),&lu->id.ICNTL(11),PETSC_NULL);CHKERRQ(ierr); 491397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_12","ICNTL(12): efficiency control","None",lu->id.ICNTL(12),&lu->id.ICNTL(12),PETSC_NULL);CHKERRQ(ierr); 492397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_13","ICNTL(13): efficiency control","None",lu->id.ICNTL(13),&lu->id.ICNTL(13),PETSC_NULL);CHKERRQ(ierr); 493adc1d99fSHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_14","ICNTL(14): percentage of estimated workspace increase","None",lu->id.ICNTL(14),&lu->id.ICNTL(14),PETSC_NULL);CHKERRQ(ierr); 494397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_15","ICNTL(15): efficiency control","None",lu->id.ICNTL(15),&lu->id.ICNTL(15),PETSC_NULL);CHKERRQ(ierr); 495397b6df1SKris Buschelman 496397b6df1SKris Buschelman /* 497397b6df1SKris Buschelman ierr = PetscOptionsInt("-mat_mumps_icntl_16","ICNTL(16): 1: rank detection; 2: rank detection and nullspace","None",lu->id.ICNTL(16),&icntl,&flg);CHKERRQ(ierr); 498397b6df1SKris Buschelman if (flg){ 499397b6df1SKris Buschelman if (icntl >-1 && icntl <3 ){ 500397b6df1SKris Buschelman if (lu->myid==0) lu->id.ICNTL(16) = icntl; 501397b6df1SKris Buschelman } else { 502397b6df1SKris Buschelman SETERRQ1(PETSC_ERR_SUP,"ICNTL(16)=%d -- not supported\n",icntl); 503397b6df1SKris Buschelman } 504397b6df1SKris Buschelman } 505397b6df1SKris Buschelman */ 506397b6df1SKris Buschelman 507397b6df1SKris Buschelman ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",lu->id.CNTL(1),&lu->id.CNTL(1),PETSC_NULL);CHKERRQ(ierr); 508397b6df1SKris Buschelman ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",lu->id.CNTL(2),&lu->id.CNTL(2),PETSC_NULL);CHKERRQ(ierr); 509397b6df1SKris Buschelman ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",lu->id.CNTL(3),&lu->id.CNTL(3),PETSC_NULL);CHKERRQ(ierr); 510397b6df1SKris Buschelman PetscOptionsEnd(); 511397b6df1SKris Buschelman } 512397b6df1SKris Buschelman 513397b6df1SKris Buschelman /* define matrix A */ 514397b6df1SKris Buschelman switch (lu->id.ICNTL(18)){ 515397b6df1SKris Buschelman case 0: /* centralized assembled matrix input (size=1) */ 516397b6df1SKris Buschelman if (!lu->myid) { 517c36ead0aSKris Buschelman if (lua->isAIJ){ 518397b6df1SKris Buschelman Mat_SeqAIJ *aa = (Mat_SeqAIJ*)A->data; 519397b6df1SKris Buschelman nz = aa->nz; 520397b6df1SKris Buschelman ai = aa->i; aj = aa->j; lu->val = aa->a; 521397b6df1SKris Buschelman } else { 522397b6df1SKris Buschelman Mat_SeqSBAIJ *aa = (Mat_SeqSBAIJ*)A->data; 5236c6c5352SBarry Smith nz = aa->nz; 524397b6df1SKris Buschelman ai = aa->i; aj = aa->j; lu->val = aa->a; 525397b6df1SKris Buschelman } 526397b6df1SKris Buschelman if (lu->matstruc == DIFFERENT_NONZERO_PATTERN){ /* first numeric factorization, get irn and jcn */ 527397b6df1SKris Buschelman ierr = PetscMalloc(nz*sizeof(int),&lu->irn);CHKERRQ(ierr); 528397b6df1SKris Buschelman ierr = PetscMalloc(nz*sizeof(int),&lu->jcn);CHKERRQ(ierr); 529397b6df1SKris Buschelman nz = 0; 530397b6df1SKris Buschelman for (i=0; i<M; i++){ 531397b6df1SKris Buschelman rnz = ai[i+1] - ai[i]; 532397b6df1SKris Buschelman while (rnz--) { /* Fortran row/col index! */ 533397b6df1SKris Buschelman lu->irn[nz] = i+1; lu->jcn[nz] = (*aj)+1; aj++; nz++; 534397b6df1SKris Buschelman } 535397b6df1SKris Buschelman } 536397b6df1SKris Buschelman } 537397b6df1SKris Buschelman } 538397b6df1SKris Buschelman break; 539397b6df1SKris Buschelman case 3: /* distributed assembled matrix input (size>1) */ 540397b6df1SKris Buschelman if (lu->matstruc == DIFFERENT_NONZERO_PATTERN){ 541397b6df1SKris Buschelman valOnly = PETSC_FALSE; 542397b6df1SKris Buschelman } else { 543397b6df1SKris Buschelman valOnly = PETSC_TRUE; /* only update mat values, not row and col index */ 544397b6df1SKris Buschelman } 545397b6df1SKris Buschelman ierr = MatConvertToTriples(A,1,valOnly, &nnz, &lu->irn, &lu->jcn, &lu->val);CHKERRQ(ierr); 546397b6df1SKris Buschelman break; 547397b6df1SKris Buschelman default: SETERRQ(PETSC_ERR_SUP,"Matrix input format is not supported by MUMPS."); 548397b6df1SKris Buschelman } 549397b6df1SKris Buschelman 550397b6df1SKris Buschelman /* analysis phase */ 551397b6df1SKris Buschelman if (lu->matstruc == DIFFERENT_NONZERO_PATTERN){ 552397b6df1SKris Buschelman lu->id.n = M; 553397b6df1SKris Buschelman switch (lu->id.ICNTL(18)){ 554397b6df1SKris Buschelman case 0: /* centralized assembled matrix input */ 555397b6df1SKris Buschelman if (!lu->myid) { 556397b6df1SKris Buschelman lu->id.nz =nz; lu->id.irn=lu->irn; lu->id.jcn=lu->jcn; 557397b6df1SKris Buschelman if (lu->id.ICNTL(6)>1){ 558397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 559397b6df1SKris Buschelman lu->id.a = (mumps_double_complex*)lu->val; 560397b6df1SKris Buschelman #else 561397b6df1SKris Buschelman lu->id.a = lu->val; 562397b6df1SKris Buschelman #endif 563397b6df1SKris Buschelman } 564397b6df1SKris Buschelman } 565397b6df1SKris Buschelman break; 566397b6df1SKris Buschelman case 3: /* distributed assembled matrix input (size>1) */ 567397b6df1SKris Buschelman lu->id.nz_loc = nnz; 568397b6df1SKris Buschelman lu->id.irn_loc=lu->irn; lu->id.jcn_loc=lu->jcn; 569397b6df1SKris Buschelman if (lu->id.ICNTL(6)>1) { 570397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 571397b6df1SKris Buschelman lu->id.a_loc = (mumps_double_complex*)lu->val; 572397b6df1SKris Buschelman #else 573397b6df1SKris Buschelman lu->id.a_loc = lu->val; 574397b6df1SKris Buschelman #endif 575397b6df1SKris Buschelman } 576397b6df1SKris Buschelman break; 577397b6df1SKris Buschelman } 578397b6df1SKris Buschelman lu->id.job=1; 579397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 580397b6df1SKris Buschelman zmumps_c(&lu->id); 581397b6df1SKris Buschelman #else 582397b6df1SKris Buschelman dmumps_c(&lu->id); 583397b6df1SKris Buschelman #endif 584397b6df1SKris Buschelman if (lu->id.INFOG(1) < 0) { 585397b6df1SKris Buschelman SETERRQ1(1,"Error reported by MUMPS in analysis phase: INFOG(1)=%d\n",lu->id.INFOG(1)); 586397b6df1SKris Buschelman } 587397b6df1SKris Buschelman } 588397b6df1SKris Buschelman 589397b6df1SKris Buschelman /* numerical factorization phase */ 590397b6df1SKris Buschelman if(lu->id.ICNTL(18) == 0) { 591a7aca84bSHong Zhang if (!lu->myid) { 592397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 593397b6df1SKris Buschelman lu->id.a = (mumps_double_complex*)lu->val; 594397b6df1SKris Buschelman #else 595397b6df1SKris Buschelman lu->id.a = lu->val; 596397b6df1SKris Buschelman #endif 597397b6df1SKris Buschelman } 598397b6df1SKris Buschelman } else { 599397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 600397b6df1SKris Buschelman lu->id.a_loc = (mumps_double_complex*)lu->val; 601397b6df1SKris Buschelman #else 602397b6df1SKris Buschelman lu->id.a_loc = lu->val; 603397b6df1SKris Buschelman #endif 604397b6df1SKris Buschelman } 605397b6df1SKris Buschelman lu->id.job=2; 606397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 607397b6df1SKris Buschelman zmumps_c(&lu->id); 608397b6df1SKris Buschelman #else 609397b6df1SKris Buschelman dmumps_c(&lu->id); 610397b6df1SKris Buschelman #endif 611397b6df1SKris Buschelman if (lu->id.INFOG(1) < 0) { 612a7aca84bSHong Zhang SETERRQ2(1,"Error reported by MUMPS in numerical factorization phase: INFO(1)=%d, INFO(2)=%d\n",lu->id.INFO(1),lu->id.INFO(2)); 613397b6df1SKris Buschelman } 614397b6df1SKris Buschelman 615397b6df1SKris Buschelman if (lu->myid==0 && lu->id.ICNTL(16) > 0){ 616397b6df1SKris Buschelman SETERRQ1(1," lu->id.ICNTL(16):=%d\n",lu->id.INFOG(16)); 617397b6df1SKris Buschelman } 618397b6df1SKris Buschelman 619397b6df1SKris Buschelman (*F)->assembled = PETSC_TRUE; 620397b6df1SKris Buschelman lu->matstruc = SAME_NONZERO_PATTERN; 621ace87b0dSHong Zhang lu->CleanUpMUMPS = PETSC_TRUE; 622397b6df1SKris Buschelman PetscFunctionReturn(0); 623397b6df1SKris Buschelman } 624397b6df1SKris Buschelman 625397b6df1SKris Buschelman /* Note the Petsc r and c permutations are ignored */ 626397b6df1SKris Buschelman #undef __FUNCT__ 627f0c56d0fSKris Buschelman #define __FUNCT__ "MatLUFactorSymbolic_AIJMUMPS" 628f0c56d0fSKris Buschelman int MatLUFactorSymbolic_AIJMUMPS(Mat A,IS r,IS c,MatFactorInfo *info,Mat *F) { 629397b6df1SKris Buschelman Mat B; 630f0c56d0fSKris Buschelman Mat_MUMPS *lu; 631397b6df1SKris Buschelman int ierr; 632397b6df1SKris Buschelman 633397b6df1SKris Buschelman PetscFunctionBegin; 634397b6df1SKris Buschelman 635397b6df1SKris Buschelman /* Create the factorization matrix */ 636397b6df1SKris Buschelman ierr = MatCreate(A->comm,A->m,A->n,A->M,A->N,&B);CHKERRQ(ierr); 637397b6df1SKris Buschelman ierr = MatSetType(B,MATAIJMUMPS);CHKERRQ(ierr); 638397b6df1SKris Buschelman ierr = MatSeqAIJSetPreallocation(B,0,PETSC_NULL);CHKERRQ(ierr); 639397b6df1SKris Buschelman ierr = MatMPIAIJSetPreallocation(B,0,PETSC_NULL,0,PETSC_NULL);CHKERRQ(ierr); 640397b6df1SKris Buschelman 641f0c56d0fSKris Buschelman B->ops->lufactornumeric = MatFactorNumeric_AIJMUMPS; 642397b6df1SKris Buschelman B->factor = FACTOR_LU; 643f0c56d0fSKris Buschelman lu = (Mat_MUMPS*)B->spptr; 644397b6df1SKris Buschelman lu->sym = 0; 645397b6df1SKris Buschelman lu->matstruc = DIFFERENT_NONZERO_PATTERN; 646397b6df1SKris Buschelman 647397b6df1SKris Buschelman *F = B; 648397b6df1SKris Buschelman PetscFunctionReturn(0); 649397b6df1SKris Buschelman } 650397b6df1SKris Buschelman 651397b6df1SKris Buschelman /* Note the Petsc r permutation is ignored */ 652397b6df1SKris Buschelman #undef __FUNCT__ 653f0c56d0fSKris Buschelman #define __FUNCT__ "MatCholeskyFactorSymbolic_SBAIJMUMPS" 654f0c56d0fSKris Buschelman int MatCholeskyFactorSymbolic_SBAIJMUMPS(Mat A,IS r,MatFactorInfo *info,Mat *F) { 655397b6df1SKris Buschelman Mat B; 656f0c56d0fSKris Buschelman Mat_MUMPS *lu; 657397b6df1SKris Buschelman int ierr; 658397b6df1SKris Buschelman 659397b6df1SKris Buschelman PetscFunctionBegin; 660397b6df1SKris Buschelman 661397b6df1SKris Buschelman /* Create the factorization matrix */ 662397b6df1SKris Buschelman ierr = MatCreate(A->comm,A->m,A->n,A->M,A->N,&B);CHKERRQ(ierr); 663397b6df1SKris Buschelman ierr = MatSetType(B,MATAIJMUMPS);CHKERRQ(ierr); 664397b6df1SKris Buschelman ierr = MatSeqAIJSetPreallocation(B,0,PETSC_NULL);CHKERRQ(ierr); 665397b6df1SKris Buschelman ierr = MatMPIAIJSetPreallocation(B,0,PETSC_NULL,0,PETSC_NULL);CHKERRQ(ierr); 666397b6df1SKris Buschelman 667f0c56d0fSKris Buschelman B->ops->choleskyfactornumeric = MatFactorNumeric_AIJMUMPS; 668a58c3f20SHong Zhang B->ops->getinertia = MatGetInertia_SBAIJMUMPS; 669397b6df1SKris Buschelman B->factor = FACTOR_CHOLESKY; 670f0c56d0fSKris Buschelman lu = (Mat_MUMPS*)B->spptr; 671397b6df1SKris Buschelman lu->sym = 2; 672397b6df1SKris Buschelman lu->matstruc = DIFFERENT_NONZERO_PATTERN; 673397b6df1SKris Buschelman 674397b6df1SKris Buschelman *F = B; 675397b6df1SKris Buschelman PetscFunctionReturn(0); 676397b6df1SKris Buschelman } 677397b6df1SKris Buschelman 678397b6df1SKris Buschelman #undef __FUNCT__ 679f0c56d0fSKris Buschelman #define __FUNCT__ "MatAssemblyEnd_AIJMUMPS" 680f0c56d0fSKris Buschelman int MatAssemblyEnd_AIJMUMPS(Mat A,MatAssemblyType mode) { 681c338a77dSKris Buschelman int ierr; 682f0c56d0fSKris Buschelman Mat_MUMPS *mumps=(Mat_MUMPS*)A->spptr; 683c338a77dSKris Buschelman 684397b6df1SKris Buschelman PetscFunctionBegin; 685c338a77dSKris Buschelman ierr = (*mumps->MatAssemblyEnd)(A,mode);CHKERRQ(ierr); 686f0c56d0fSKris Buschelman 687c338a77dSKris Buschelman mumps->MatLUFactorSymbolic = A->ops->lufactorsymbolic; 688c338a77dSKris Buschelman mumps->MatCholeskyFactorSymbolic = A->ops->choleskyfactorsymbolic; 689f0c56d0fSKris Buschelman A->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 690397b6df1SKris Buschelman PetscFunctionReturn(0); 691397b6df1SKris Buschelman } 692397b6df1SKris Buschelman 693c338a77dSKris Buschelman EXTERN_C_BEGIN 694c338a77dSKris Buschelman #undef __FUNCT__ 695f0c56d0fSKris Buschelman #define __FUNCT__ "MatConvert_AIJ_AIJMUMPS" 6968e9aea5cSBarry Smith int MatConvert_AIJ_AIJMUMPS(Mat A,const MatType newtype,Mat *newmat) { 697c338a77dSKris Buschelman int ierr,size; 698c338a77dSKris Buschelman MPI_Comm comm; 699c338a77dSKris Buschelman Mat B=*newmat; 700f0c56d0fSKris Buschelman Mat_MUMPS *mumps; 701397b6df1SKris Buschelman 702397b6df1SKris Buschelman PetscFunctionBegin; 703c338a77dSKris Buschelman if (B != A) { 704c338a77dSKris Buschelman ierr = MatDuplicate(A,MAT_COPY_VALUES,&B);CHKERRQ(ierr); 705397b6df1SKris Buschelman } 706397b6df1SKris Buschelman 707c338a77dSKris Buschelman ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr); 708f0c56d0fSKris Buschelman ierr = PetscNew(Mat_MUMPS,&mumps);CHKERRQ(ierr); 709c338a77dSKris Buschelman 710f0c56d0fSKris Buschelman mumps->MatDuplicate = A->ops->duplicate; 711c338a77dSKris Buschelman mumps->MatView = A->ops->view; 712c338a77dSKris Buschelman mumps->MatAssemblyEnd = A->ops->assemblyend; 713c338a77dSKris Buschelman mumps->MatLUFactorSymbolic = A->ops->lufactorsymbolic; 714c338a77dSKris Buschelman mumps->MatCholeskyFactorSymbolic = A->ops->choleskyfactorsymbolic; 715c338a77dSKris Buschelman mumps->MatDestroy = A->ops->destroy; 716a39386dcSKris Buschelman mumps->specialdestroy = MatDestroy_AIJMUMPS; 717c338a77dSKris Buschelman mumps->CleanUpMUMPS = PETSC_FALSE; 718f579278aSKris Buschelman mumps->isAIJ = PETSC_TRUE; 719c338a77dSKris Buschelman 7204b68dd72SKris Buschelman B->spptr = (void *)mumps; 721f0c56d0fSKris Buschelman B->ops->duplicate = MatDuplicate_AIJMUMPS; 722f0c56d0fSKris Buschelman B->ops->view = MatView_AIJMUMPS; 723f0c56d0fSKris Buschelman B->ops->assemblyend = MatAssemblyEnd_AIJMUMPS; 724f0c56d0fSKris Buschelman B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 7253924e44cSKris Buschelman B->ops->destroy = MatDestroy_MUMPS; 726c338a77dSKris Buschelman 727c338a77dSKris Buschelman ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);CHKERRQ(ierr); 728c338a77dSKris Buschelman if (size == 1) { 729c338a77dSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_seqaij_aijmumps_C", 730f0c56d0fSKris Buschelman "MatConvert_AIJ_AIJMUMPS",MatConvert_AIJ_AIJMUMPS);CHKERRQ(ierr); 731c338a77dSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_aijmumps_seqaij_C", 732c338a77dSKris Buschelman "MatConvert_MUMPS_Base",MatConvert_MUMPS_Base);CHKERRQ(ierr); 733c338a77dSKris Buschelman } else { 734c338a77dSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_mpiaij_aijmumps_C", 735f0c56d0fSKris Buschelman "MatConvert_AIJ_AIJMUMPS",MatConvert_AIJ_AIJMUMPS);CHKERRQ(ierr); 736c338a77dSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_aijmumps_mpiaij_C", 737c338a77dSKris Buschelman "MatConvert_MUMPS_Base",MatConvert_MUMPS_Base);CHKERRQ(ierr); 738c338a77dSKris Buschelman } 739c338a77dSKris Buschelman 740f579278aSKris Buschelman PetscLogInfo(0,"Using MUMPS for LU factorization and solves."); 741c338a77dSKris Buschelman ierr = PetscObjectChangeTypeName((PetscObject)B,newtype);CHKERRQ(ierr); 742c338a77dSKris Buschelman *newmat = B; 743397b6df1SKris Buschelman PetscFunctionReturn(0); 744397b6df1SKris Buschelman } 745c338a77dSKris Buschelman EXTERN_C_END 746397b6df1SKris Buschelman 747f0c56d0fSKris Buschelman #undef __FUNCT__ 748f0c56d0fSKris Buschelman #define __FUNCT__ "MatDuplicate_AIJMUMPS" 749f0c56d0fSKris Buschelman int MatDuplicate_AIJMUMPS(Mat A, MatDuplicateOption op, Mat *M) { 750f0c56d0fSKris Buschelman int ierr; 7518f340917SKris Buschelman Mat_MUMPS *lu=(Mat_MUMPS *)A->spptr; 7528f340917SKris Buschelman 753f0c56d0fSKris Buschelman PetscFunctionBegin; 7548f340917SKris Buschelman ierr = (*lu->MatDuplicate)(A,op,M);CHKERRQ(ierr); 755f0c56d0fSKris Buschelman ierr = MatConvert_AIJ_AIJMUMPS(*M,MATAIJMUMPS,M);CHKERRQ(ierr); 756a39386dcSKris Buschelman ierr = PetscMemcpy((*M)->spptr,lu,sizeof(Mat_MUMPS));CHKERRQ(ierr); 757f0c56d0fSKris Buschelman PetscFunctionReturn(0); 758f0c56d0fSKris Buschelman } 759f0c56d0fSKris Buschelman 76024b6179bSKris Buschelman /*MC 761fafad747SKris Buschelman MATAIJMUMPS - MATAIJMUMPS = "aijmumps" - A matrix type providing direct solvers (LU) for distributed 76224b6179bSKris Buschelman and sequential matrices via the external package MUMPS. 76324b6179bSKris Buschelman 76424b6179bSKris Buschelman If MUMPS is installed (see the manual for instructions 76524b6179bSKris Buschelman on how to declare the existence of external packages), 76624b6179bSKris Buschelman a matrix type can be constructed which invokes MUMPS solvers. 76724b6179bSKris Buschelman After calling MatCreate(...,A), simply call MatSetType(A,MATAIJMUMPS). 76824b6179bSKris Buschelman This matrix type is only supported for double precision real. 76924b6179bSKris Buschelman 77024b6179bSKris Buschelman If created with a single process communicator, this matrix type inherits from MATSEQAIJ. 77124b6179bSKris Buschelman Otherwise, this matrix type inherits from MATMPIAIJ. Hence for single process communicators, 77224b6179bSKris Buschelman MatSeqAIJSetPreallocation is supported, and similarly MatMPIAIJSetPreallocation is supported 77324b6179bSKris Buschelman for communicators controlling multiple processes. It is recommended that you call both of 77428b08bd3SKris Buschelman the above preallocation routines for simplicity. One can also call MatConvert for an inplace 77528b08bd3SKris Buschelman conversion to or from the MATSEQAIJ or MATMPIAIJ type (depending on the communicator size) 77628b08bd3SKris Buschelman without data copy. 77724b6179bSKris Buschelman 77824b6179bSKris Buschelman Options Database Keys: 7790bad9183SKris Buschelman + -mat_type aijmumps - sets the matrix type to "aijmumps" during a call to MatSetFromOptions() 78024b6179bSKris Buschelman . -mat_mumps_sym <0,1,2> - 0 the matrix is unsymmetric, 1 symmetric positive definite, 2 symmetric 78124b6179bSKris Buschelman . -mat_mumps_icntl_4 <0,1,2,3,4> - print level 78224b6179bSKris Buschelman . -mat_mumps_icntl_6 <0,...,7> - matrix prescaling options (see MUMPS User's Guide) 78324b6179bSKris Buschelman . -mat_mumps_icntl_7 <0,...,7> - matrix orderings (see MUMPS User's Guide) 78424b6179bSKris Buschelman . -mat_mumps_icntl_9 <1,2> - A or A^T x=b to be solved: 1 denotes A, 2 denotes A^T 78524b6179bSKris Buschelman . -mat_mumps_icntl_10 <n> - maximum number of iterative refinements 78694b7f48cSBarry Smith . -mat_mumps_icntl_11 <n> - error analysis, a positive value returns statistics during -ksp_view 78724b6179bSKris Buschelman . -mat_mumps_icntl_12 <n> - efficiency control (see MUMPS User's Guide) 78824b6179bSKris Buschelman . -mat_mumps_icntl_13 <n> - efficiency control (see MUMPS User's Guide) 78924b6179bSKris Buschelman . -mat_mumps_icntl_14 <n> - efficiency control (see MUMPS User's Guide) 79024b6179bSKris Buschelman . -mat_mumps_icntl_15 <n> - efficiency control (see MUMPS User's Guide) 79124b6179bSKris Buschelman . -mat_mumps_cntl_1 <delta> - relative pivoting threshold 79224b6179bSKris Buschelman . -mat_mumps_cntl_2 <tol> - stopping criterion for refinement 79324b6179bSKris Buschelman - -mat_mumps_cntl_3 <adelta> - absolute pivoting threshold 79424b6179bSKris Buschelman 79524b6179bSKris Buschelman Level: beginner 79624b6179bSKris Buschelman 79724b6179bSKris Buschelman .seealso: MATSBAIJMUMPS 79824b6179bSKris Buschelman M*/ 79924b6179bSKris Buschelman 800397b6df1SKris Buschelman EXTERN_C_BEGIN 801397b6df1SKris Buschelman #undef __FUNCT__ 802f0c56d0fSKris Buschelman #define __FUNCT__ "MatCreate_AIJMUMPS" 803f0c56d0fSKris Buschelman int MatCreate_AIJMUMPS(Mat A) { 804397b6df1SKris Buschelman int ierr,size; 805e2d9671bSKris Buschelman Mat A_diag; 806397b6df1SKris Buschelman MPI_Comm comm; 807397b6df1SKris Buschelman 808397b6df1SKris Buschelman PetscFunctionBegin; 8095441df8eSKris Buschelman /* Change type name before calling MatSetType to force proper construction of SeqAIJ or MPIAIJ */ 8105441df8eSKris Buschelman /* and AIJMUMPS types */ 8115441df8eSKris Buschelman ierr = PetscObjectChangeTypeName((PetscObject)A,MATAIJMUMPS);CHKERRQ(ierr); 812397b6df1SKris Buschelman ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr); 813397b6df1SKris Buschelman ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);CHKERRQ(ierr); 814397b6df1SKris Buschelman if (size == 1) { 815397b6df1SKris Buschelman ierr = MatSetType(A,MATSEQAIJ);CHKERRQ(ierr); 816397b6df1SKris Buschelman } else { 817397b6df1SKris Buschelman ierr = MatSetType(A,MATMPIAIJ);CHKERRQ(ierr); 818e2d9671bSKris Buschelman A_diag = ((Mat_MPIAIJ *)A->data)->A; 819e2d9671bSKris Buschelman ierr = MatConvert_AIJ_AIJMUMPS(A_diag,MATAIJMUMPS,&A_diag);CHKERRQ(ierr); 820397b6df1SKris Buschelman } 821f0c56d0fSKris Buschelman ierr = MatConvert_AIJ_AIJMUMPS(A,MATAIJMUMPS,&A);CHKERRQ(ierr); 822397b6df1SKris Buschelman PetscFunctionReturn(0); 823397b6df1SKris Buschelman } 824397b6df1SKris Buschelman EXTERN_C_END 825397b6df1SKris Buschelman 826f579278aSKris Buschelman #undef __FUNCT__ 827f0c56d0fSKris Buschelman #define __FUNCT__ "MatAssemblyEnd_SBAIJMUMPS" 828f0c56d0fSKris Buschelman int MatAssemblyEnd_SBAIJMUMPS(Mat A,MatAssemblyType mode) { 829f579278aSKris Buschelman int ierr; 830f0c56d0fSKris Buschelman Mat_MUMPS *mumps=(Mat_MUMPS*)A->spptr; 831f579278aSKris Buschelman 832f579278aSKris Buschelman PetscFunctionBegin; 833f579278aSKris Buschelman ierr = (*mumps->MatAssemblyEnd)(A,mode);CHKERRQ(ierr); 834f579278aSKris Buschelman mumps->MatLUFactorSymbolic = A->ops->lufactorsymbolic; 835f579278aSKris Buschelman mumps->MatCholeskyFactorSymbolic = A->ops->choleskyfactorsymbolic; 836f0c56d0fSKris Buschelman A->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SBAIJMUMPS; 837f579278aSKris Buschelman PetscFunctionReturn(0); 838f579278aSKris Buschelman } 839f579278aSKris Buschelman 840f579278aSKris Buschelman EXTERN_C_BEGIN 841f579278aSKris Buschelman #undef __FUNCT__ 842*9c097c71SKris Buschelman #define __FUNCT__ "MatMPISBAIJSetPreallocation_MPISBAIJMUMPS" 843*9c097c71SKris Buschelman int MatMPISBAIJSetPreallocation_MPISBAIJMUMPS(Mat B,int bs,int d_nz,int *d_nnz,int o_nz,int *o_nnz) 844*9c097c71SKris Buschelman { 845*9c097c71SKris Buschelman Mat A; 846*9c097c71SKris Buschelman Mat_MUMPS *mumps; 847*9c097c71SKris Buschelman int ierr; 848*9c097c71SKris Buschelman 849*9c097c71SKris Buschelman PetscFunctionBegin; 850*9c097c71SKris Buschelman /* 851*9c097c71SKris Buschelman After performing the MPISBAIJ Preallocation, we need to convert the local diagonal block matrix 852*9c097c71SKris Buschelman into MUMPS type so that the block jacobi preconditioner (for example) can use MUMPS. I would 853*9c097c71SKris Buschelman like this to be done in the MatCreate routine, but the creation of this inner matrix requires 854*9c097c71SKris Buschelman block size info so that PETSc can determine the local size properly. The block size info is set 855*9c097c71SKris Buschelman in the preallocation routine. 856*9c097c71SKris Buschelman */ 857*9c097c71SKris Buschelman ierr = (*mumps->MatPreallocate)(B,bs,d_nz,d_nnz,o_nz,o_nnz); 858*9c097c71SKris Buschelman A = ((Mat_MPISBAIJ *)B->data)->A; 859*9c097c71SKris Buschelman ierr = MatConvert_SBAIJ_SBAIJMUMPS(A,MATSBAIJMUMPS,&A);CHKERRQ(ierr); 860*9c097c71SKris Buschelman PetscFunctionReturn(0); 861*9c097c71SKris Buschelman } 862*9c097c71SKris Buschelman EXTERN_C_END 863*9c097c71SKris Buschelman 864*9c097c71SKris Buschelman EXTERN_C_BEGIN 865*9c097c71SKris Buschelman #undef __FUNCT__ 866f0c56d0fSKris Buschelman #define __FUNCT__ "MatConvert_SBAIJ_SBAIJMUMPS" 8678e9aea5cSBarry Smith int MatConvert_SBAIJ_SBAIJMUMPS(Mat A,const MatType newtype,Mat *newmat) { 868f579278aSKris Buschelman int ierr,size; 869f579278aSKris Buschelman MPI_Comm comm; 870f579278aSKris Buschelman Mat B=*newmat; 871f0c56d0fSKris Buschelman Mat_MUMPS *mumps; 872*9c097c71SKris Buschelman void (*f)(void); 873f579278aSKris Buschelman 874f579278aSKris Buschelman PetscFunctionBegin; 875f579278aSKris Buschelman if (B != A) { 876f579278aSKris Buschelman ierr = MatDuplicate(A,MAT_COPY_VALUES,&B);CHKERRQ(ierr); 877f579278aSKris Buschelman } 878f579278aSKris Buschelman 879f579278aSKris Buschelman ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr); 880f0c56d0fSKris Buschelman ierr = PetscNew(Mat_MUMPS,&mumps);CHKERRQ(ierr); 881f579278aSKris Buschelman 882f0c56d0fSKris Buschelman mumps->MatDuplicate = A->ops->duplicate; 883f579278aSKris Buschelman mumps->MatView = A->ops->view; 884f579278aSKris Buschelman mumps->MatAssemblyEnd = A->ops->assemblyend; 885f579278aSKris Buschelman mumps->MatLUFactorSymbolic = A->ops->lufactorsymbolic; 886f579278aSKris Buschelman mumps->MatCholeskyFactorSymbolic = A->ops->choleskyfactorsymbolic; 887f579278aSKris Buschelman mumps->MatDestroy = A->ops->destroy; 888a39386dcSKris Buschelman mumps->specialdestroy = MatDestroy_SBAIJMUMPS; 889f579278aSKris Buschelman mumps->CleanUpMUMPS = PETSC_FALSE; 890f579278aSKris Buschelman mumps->isAIJ = PETSC_FALSE; 891f579278aSKris Buschelman 892f579278aSKris Buschelman B->spptr = (void *)mumps; 893f0c56d0fSKris Buschelman B->ops->duplicate = MatDuplicate_SBAIJMUMPS; 894f0c56d0fSKris Buschelman B->ops->view = MatView_AIJMUMPS; 895f0c56d0fSKris Buschelman B->ops->assemblyend = MatAssemblyEnd_SBAIJMUMPS; 896f0c56d0fSKris Buschelman B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SBAIJMUMPS; 8973924e44cSKris Buschelman B->ops->destroy = MatDestroy_MUMPS; 898f579278aSKris Buschelman 899f579278aSKris Buschelman ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);CHKERRQ(ierr); 900f579278aSKris Buschelman if (size == 1) { 901f0c56d0fSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_seqsbaij_sbaijmumps_C", 902f0c56d0fSKris Buschelman "MatConvert_SBAIJ_SBAIJMUMPS",MatConvert_SBAIJ_SBAIJMUMPS);CHKERRQ(ierr); 903f0c56d0fSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_sbaijmumps_seqsbaij_C", 904f579278aSKris Buschelman "MatConvert_MUMPS_Base",MatConvert_MUMPS_Base);CHKERRQ(ierr); 905f579278aSKris Buschelman } else { 906*9c097c71SKris Buschelman /* I really don't like needing to know the tag: MatMPISBAIJSetPreallocation_C */ 907*9c097c71SKris Buschelman ierr = PetscObjectQueryFunction((PetscObject)B,"MatMPISBAIJSetPreallocation_C",&f);CHKERRQ(ierr); 908*9c097c71SKris Buschelman if (f) { 909*9c097c71SKris Buschelman mumps->MatPreallocate = (int (*)(Mat,int,int,int*,int,int*))f; 910*9c097c71SKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatMPISBAIJSetPreallocation_C", 911*9c097c71SKris Buschelman "MatMPISBAIJSetPreallocation_MPISBAIJMUMPS", 912*9c097c71SKris Buschelman MatMPISBAIJSetPreallocation_MPISBAIJMUMPS);CHKERRQ(ierr); 913*9c097c71SKris Buschelman } 914f0c56d0fSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_mpisbaij_sbaijmumps_C", 915f0c56d0fSKris Buschelman "MatConvert_SBAIJ_SBAIJMUMPS",MatConvert_SBAIJ_SBAIJMUMPS);CHKERRQ(ierr); 916f0c56d0fSKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_sbaijmumps_mpisbaij_C", 917f579278aSKris Buschelman "MatConvert_MUMPS_Base",MatConvert_MUMPS_Base);CHKERRQ(ierr); 918f579278aSKris Buschelman } 919f579278aSKris Buschelman 920f579278aSKris Buschelman PetscLogInfo(0,"Using MUMPS for Cholesky factorization and solves."); 921f579278aSKris Buschelman ierr = PetscObjectChangeTypeName((PetscObject)B,newtype);CHKERRQ(ierr); 922f579278aSKris Buschelman *newmat = B; 923f579278aSKris Buschelman PetscFunctionReturn(0); 924f579278aSKris Buschelman } 925f579278aSKris Buschelman EXTERN_C_END 926f579278aSKris Buschelman 927f0c56d0fSKris Buschelman #undef __FUNCT__ 928f0c56d0fSKris Buschelman #define __FUNCT__ "MatDuplicate_SBAIJMUMPS" 929f0c56d0fSKris Buschelman int MatDuplicate_SBAIJMUMPS(Mat A, MatDuplicateOption op, Mat *M) { 930f0c56d0fSKris Buschelman int ierr; 9318f340917SKris Buschelman Mat_MUMPS *lu=(Mat_MUMPS *)A->spptr; 9328f340917SKris Buschelman 933f0c56d0fSKris Buschelman PetscFunctionBegin; 9348f340917SKris Buschelman ierr = (*lu->MatDuplicate)(A,op,M);CHKERRQ(ierr); 935f0c56d0fSKris Buschelman ierr = MatConvert_SBAIJ_SBAIJMUMPS(*M,MATSBAIJMUMPS,M);CHKERRQ(ierr); 9363f953163SKris Buschelman ierr = PetscMemcpy((*M)->spptr,lu,sizeof(Mat_MUMPS));CHKERRQ(ierr); 937f0c56d0fSKris Buschelman PetscFunctionReturn(0); 938f0c56d0fSKris Buschelman } 939f0c56d0fSKris Buschelman 94024b6179bSKris Buschelman /*MC 941fafad747SKris Buschelman MATSBAIJMUMPS - MATSBAIJMUMPS = "sbaijmumps" - A symmetric matrix type providing direct solvers (Cholesky) for 94224b6179bSKris Buschelman distributed and sequential matrices via the external package MUMPS. 94324b6179bSKris Buschelman 94424b6179bSKris Buschelman If MUMPS is installed (see the manual for instructions 94524b6179bSKris Buschelman on how to declare the existence of external packages), 94624b6179bSKris Buschelman a matrix type can be constructed which invokes MUMPS solvers. 94724b6179bSKris Buschelman After calling MatCreate(...,A), simply call MatSetType(A,MATSBAIJMUMPS). 94824b6179bSKris Buschelman This matrix type is only supported for double precision real. 94924b6179bSKris Buschelman 95024b6179bSKris Buschelman If created with a single process communicator, this matrix type inherits from MATSEQSBAIJ. 95124b6179bSKris Buschelman Otherwise, this matrix type inherits from MATMPISBAIJ. Hence for single process communicators, 95224b6179bSKris Buschelman MatSeqSBAIJSetPreallocation is supported, and similarly MatMPISBAIJSetPreallocation is supported 95324b6179bSKris Buschelman for communicators controlling multiple processes. It is recommended that you call both of 95428b08bd3SKris Buschelman the above preallocation routines for simplicity. One can also call MatConvert for an inplace 95528b08bd3SKris Buschelman conversion to or from the MATSEQSBAIJ or MATMPISBAIJ type (depending on the communicator size) 95628b08bd3SKris Buschelman without data copy. 95724b6179bSKris Buschelman 95824b6179bSKris Buschelman Options Database Keys: 9590bad9183SKris Buschelman + -mat_type sbaijmumps - sets the matrix type to "sbaijmumps" during a call to MatSetFromOptions() 96024b6179bSKris Buschelman . -mat_mumps_sym <0,1,2> - 0 the matrix is unsymmetric, 1 symmetric positive definite, 2 symmetric 96124b6179bSKris Buschelman . -mat_mumps_icntl_4 <0,...,4> - print level 96224b6179bSKris Buschelman . -mat_mumps_icntl_6 <0,...,7> - matrix prescaling options (see MUMPS User's Guide) 96324b6179bSKris Buschelman . -mat_mumps_icntl_7 <0,...,7> - matrix orderings (see MUMPS User's Guide) 96424b6179bSKris Buschelman . -mat_mumps_icntl_9 <1,2> - A or A^T x=b to be solved: 1 denotes A, 2 denotes A^T 96524b6179bSKris Buschelman . -mat_mumps_icntl_10 <n> - maximum number of iterative refinements 96694b7f48cSBarry Smith . -mat_mumps_icntl_11 <n> - error analysis, a positive value returns statistics during -ksp_view 96724b6179bSKris Buschelman . -mat_mumps_icntl_12 <n> - efficiency control (see MUMPS User's Guide) 96824b6179bSKris Buschelman . -mat_mumps_icntl_13 <n> - efficiency control (see MUMPS User's Guide) 96924b6179bSKris Buschelman . -mat_mumps_icntl_14 <n> - efficiency control (see MUMPS User's Guide) 97024b6179bSKris Buschelman . -mat_mumps_icntl_15 <n> - efficiency control (see MUMPS User's Guide) 97124b6179bSKris Buschelman . -mat_mumps_cntl_1 <delta> - relative pivoting threshold 97224b6179bSKris Buschelman . -mat_mumps_cntl_2 <tol> - stopping criterion for refinement 97324b6179bSKris Buschelman - -mat_mumps_cntl_3 <adelta> - absolute pivoting threshold 97424b6179bSKris Buschelman 97524b6179bSKris Buschelman Level: beginner 97624b6179bSKris Buschelman 97724b6179bSKris Buschelman .seealso: MATAIJMUMPS 97824b6179bSKris Buschelman M*/ 97924b6179bSKris Buschelman 980397b6df1SKris Buschelman EXTERN_C_BEGIN 981397b6df1SKris Buschelman #undef __FUNCT__ 982f0c56d0fSKris Buschelman #define __FUNCT__ "MatCreate_SBAIJMUMPS" 983f0c56d0fSKris Buschelman int MatCreate_SBAIJMUMPS(Mat A) { 984397b6df1SKris Buschelman int ierr,size; 985397b6df1SKris Buschelman 986397b6df1SKris Buschelman PetscFunctionBegin; 9875441df8eSKris Buschelman /* Change type name before calling MatSetType to force proper construction of SeqSBAIJ or MPISBAIJ */ 9885441df8eSKris Buschelman /* and SBAIJMUMPS types */ 9895441df8eSKris Buschelman ierr = PetscObjectChangeTypeName((PetscObject)A,MATSBAIJMUMPS);CHKERRQ(ierr); 9905441df8eSKris Buschelman ierr = MPI_Comm_size(A->comm,&size);CHKERRQ(ierr);CHKERRQ(ierr); 991397b6df1SKris Buschelman if (size == 1) { 992397b6df1SKris Buschelman ierr = MatSetType(A,MATSEQSBAIJ);CHKERRQ(ierr); 993397b6df1SKris Buschelman } else { 994397b6df1SKris Buschelman ierr = MatSetType(A,MATMPISBAIJ);CHKERRQ(ierr); 995397b6df1SKris Buschelman } 996f0c56d0fSKris Buschelman ierr = MatConvert_SBAIJ_SBAIJMUMPS(A,MATSBAIJMUMPS,&A);CHKERRQ(ierr); 997397b6df1SKris Buschelman PetscFunctionReturn(0); 998397b6df1SKris Buschelman } 999397b6df1SKris Buschelman EXTERN_C_END 1000