11c2a3de1SBarry Smith 2397b6df1SKris Buschelman /* 3c2b5dc30SHong Zhang Provides an interface to the MUMPS sparse solver 4397b6df1SKris Buschelman */ 551d5961aSHong Zhang 6c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> /*I "petscmat.h" I*/ 7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h> 87ee00b23SStefano Zampini #include <../src/mat/impls/sell/mpi/mpisell.h> 9397b6df1SKris Buschelman 10397b6df1SKris Buschelman EXTERN_C_BEGIN 11397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 122907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 132907cef9SHong Zhang #include <cmumps_c.h> 142907cef9SHong Zhang #else 15c6db04a5SJed Brown #include <zmumps_c.h> 162907cef9SHong Zhang #endif 172907cef9SHong Zhang #else 182907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 192907cef9SHong Zhang #include <smumps_c.h> 20397b6df1SKris Buschelman #else 21c6db04a5SJed Brown #include <dmumps_c.h> 22397b6df1SKris Buschelman #endif 232907cef9SHong Zhang #endif 24397b6df1SKris Buschelman EXTERN_C_END 25397b6df1SKris Buschelman #define JOB_INIT -1 263d472b54SHong Zhang #define JOB_FACTSYMBOLIC 1 273d472b54SHong Zhang #define JOB_FACTNUMERIC 2 283d472b54SHong Zhang #define JOB_SOLVE 3 29397b6df1SKris Buschelman #define JOB_END -2 303d472b54SHong Zhang 312907cef9SHong Zhang /* calls to MUMPS */ 322907cef9SHong Zhang #if defined(PETSC_USE_COMPLEX) 332907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 343ab56b82SJunchao Zhang #define MUMPS_c cmumps_c 352907cef9SHong Zhang #else 363ab56b82SJunchao Zhang #define MUMPS_c zmumps_c 372907cef9SHong Zhang #endif 382907cef9SHong Zhang #else 392907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 403ab56b82SJunchao Zhang #define MUMPS_c smumps_c 412907cef9SHong Zhang #else 423ab56b82SJunchao Zhang #define MUMPS_c dmumps_c 432907cef9SHong Zhang #endif 442907cef9SHong Zhang #endif 452907cef9SHong Zhang 46217d3b1eSJunchao Zhang /* if using PETSc OpenMP support, we only call MUMPS on master ranks. Before/after the call, we change/restore CPUs the master ranks can run on */ 473ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 483ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 493ab56b82SJunchao Zhang do { \ 503ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { \ 513ab56b82SJunchao Zhang if (mumps->is_omp_master) { \ 523ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterBegin(mumps->omp_ctrl);CHKERRQ(ierr); \ 533ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 543ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterEnd(mumps->omp_ctrl);CHKERRQ(ierr); \ 553ab56b82SJunchao Zhang } \ 563ab56b82SJunchao Zhang ierr = PetscOmpCtrlBarrier(mumps->omp_ctrl);CHKERRQ(ierr); \ 573ab56b82SJunchao Zhang } else { \ 583ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 593ab56b82SJunchao Zhang } \ 603ab56b82SJunchao Zhang } while(0) 613ab56b82SJunchao Zhang #else 623ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 633ab56b82SJunchao Zhang do { MUMPS_c(&mumps->id); } while (0) 643ab56b82SJunchao Zhang #endif 653ab56b82SJunchao Zhang 66940cd9d6SSatish Balay /* declare MumpsScalar */ 67940cd9d6SSatish Balay #if defined(PETSC_USE_COMPLEX) 68940cd9d6SSatish Balay #if defined(PETSC_USE_REAL_SINGLE) 69940cd9d6SSatish Balay #define MumpsScalar mumps_complex 70940cd9d6SSatish Balay #else 71940cd9d6SSatish Balay #define MumpsScalar mumps_double_complex 72940cd9d6SSatish Balay #endif 73940cd9d6SSatish Balay #else 74940cd9d6SSatish Balay #define MumpsScalar PetscScalar 75940cd9d6SSatish Balay #endif 763d472b54SHong Zhang 77397b6df1SKris Buschelman /* macros s.t. indices match MUMPS documentation */ 78397b6df1SKris Buschelman #define ICNTL(I) icntl[(I)-1] 79397b6df1SKris Buschelman #define CNTL(I) cntl[(I)-1] 80397b6df1SKris Buschelman #define INFOG(I) infog[(I)-1] 81a7aca84bSHong Zhang #define INFO(I) info[(I)-1] 82397b6df1SKris Buschelman #define RINFOG(I) rinfog[(I)-1] 83adc1d99fSHong Zhang #define RINFO(I) rinfo[(I)-1] 84397b6df1SKris Buschelman 85397b6df1SKris Buschelman typedef struct { 86397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 872907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 882907cef9SHong Zhang CMUMPS_STRUC_C id; 892907cef9SHong Zhang #else 90397b6df1SKris Buschelman ZMUMPS_STRUC_C id; 912907cef9SHong Zhang #endif 922907cef9SHong Zhang #else 932907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 942907cef9SHong Zhang SMUMPS_STRUC_C id; 95397b6df1SKris Buschelman #else 96397b6df1SKris Buschelman DMUMPS_STRUC_C id; 97397b6df1SKris Buschelman #endif 982907cef9SHong Zhang #endif 992907cef9SHong Zhang 100397b6df1SKris Buschelman MatStructure matstruc; 1012d4298aeSJunchao Zhang PetscMPIInt myid,petsc_size; 102a5e57a09SHong Zhang PetscInt *irn,*jcn,nz,sym; 103397b6df1SKris Buschelman PetscScalar *val; 1042d4298aeSJunchao Zhang MPI_Comm mumps_comm; 105a5e57a09SHong Zhang PetscInt ICNTL9_pre; /* check if ICNTL(9) is changed from previous MatSolve */ 106801fbe65SHong Zhang VecScatter scat_rhs, scat_sol; /* used by MatSolve() */ 107801fbe65SHong Zhang Vec b_seq,x_seq; 108b34f08ffSHong Zhang PetscInt ninfo,*info; /* display INFO */ 109b5fa320bSStefano Zampini PetscInt sizeredrhs; 11059ac8732SStefano Zampini PetscScalar *schur_sol; 11159ac8732SStefano Zampini PetscInt schur_sizesol; 1122205254eSKarl Rupp 1133ab56b82SJunchao Zhang PetscBool use_petsc_omp_support; 1143ab56b82SJunchao Zhang PetscOmpCtrl omp_ctrl; /* an OpenMP controler that blocked processes will release their CPU (MPI_Barrier does not have this guarantee) */ 1153ab56b82SJunchao Zhang MPI_Comm petsc_comm,omp_comm; /* petsc_comm is petsc matrix's comm */ 1163ab56b82SJunchao Zhang PetscMPIInt mpinz; /* on master rank, nz = sum(mpinz) over omp_comm; on other ranks, mpinz = nz*/ 1173ab56b82SJunchao Zhang PetscMPIInt omp_comm_size; 1183ab56b82SJunchao Zhang PetscBool is_omp_master; /* is this rank the master of omp_comm */ 1193ab56b82SJunchao Zhang PetscMPIInt *recvcount,*displs; 1203ab56b82SJunchao Zhang 121bccb9932SShri Abhyankar PetscErrorCode (*ConvertToTriples)(Mat, int, MatReuse, int*, int**, int**, PetscScalar**); 122f0c56d0fSKris Buschelman } Mat_MUMPS; 123f0c56d0fSKris Buschelman 12409573ac7SBarry Smith extern PetscErrorCode MatDuplicate_MUMPS(Mat,MatDuplicateOption,Mat*); 125b24902e0SBarry Smith 12659ac8732SStefano Zampini static PetscErrorCode MatMumpsResetSchur_Private(Mat_MUMPS* mumps) 127b5fa320bSStefano Zampini { 128b5fa320bSStefano Zampini PetscErrorCode ierr; 129b5fa320bSStefano Zampini 130b5fa320bSStefano Zampini PetscFunctionBegin; 13159ac8732SStefano Zampini ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr); 13259ac8732SStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 13359ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 13459ac8732SStefano Zampini mumps->id.size_schur = 0; 135b3cb21ddSStefano Zampini mumps->id.schur_lld = 0; 13659ac8732SStefano Zampini mumps->id.ICNTL(19) = 0; 13759ac8732SStefano Zampini PetscFunctionReturn(0); 13859ac8732SStefano Zampini } 13959ac8732SStefano Zampini 140b3cb21ddSStefano Zampini /* solve with rhs in mumps->id.redrhs and return in the same location */ 141b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsSolveSchur_Private(Mat F) 14259ac8732SStefano Zampini { 143b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 144b3cb21ddSStefano Zampini Mat S,B,X; 145b3cb21ddSStefano Zampini MatFactorSchurStatus schurstatus; 146b3cb21ddSStefano Zampini PetscInt sizesol; 14759ac8732SStefano Zampini PetscErrorCode ierr; 14859ac8732SStefano Zampini 14959ac8732SStefano Zampini PetscFunctionBegin; 150b3cb21ddSStefano Zampini ierr = MatFactorFactorizeSchurComplement(F);CHKERRQ(ierr); 151b3cb21ddSStefano Zampini ierr = MatFactorGetSchurComplement(F,&S,&schurstatus);CHKERRQ(ierr); 152b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&B);CHKERRQ(ierr); 153b3cb21ddSStefano Zampini switch (schurstatus) { 154b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_FACTORED: 155b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&X);CHKERRQ(ierr); 156b3cb21ddSStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 157b3cb21ddSStefano Zampini ierr = MatMatSolveTranspose(S,B,X);CHKERRQ(ierr); 15859ac8732SStefano Zampini } else { 159b3cb21ddSStefano Zampini ierr = MatMatSolve(S,B,X);CHKERRQ(ierr); 16059ac8732SStefano Zampini } 161b3cb21ddSStefano Zampini break; 162b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_INVERTED: 163b3cb21ddSStefano Zampini sizesol = mumps->id.nrhs*mumps->id.size_schur; 16459ac8732SStefano Zampini if (!mumps->schur_sol || sizesol > mumps->schur_sizesol) { 16559ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 16659ac8732SStefano Zampini ierr = PetscMalloc1(sizesol,&mumps->schur_sol);CHKERRQ(ierr); 16759ac8732SStefano Zampini mumps->schur_sizesol = sizesol; 168b5fa320bSStefano Zampini } 169b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,mumps->schur_sol,&X);CHKERRQ(ierr); 17059ac8732SStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 171b3cb21ddSStefano Zampini ierr = MatTransposeMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 172b5fa320bSStefano Zampini } else { 173b3cb21ddSStefano Zampini ierr = MatMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 174b5fa320bSStefano Zampini } 175b3cb21ddSStefano Zampini ierr = MatCopy(X,B,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 176b3cb21ddSStefano Zampini break; 177b3cb21ddSStefano Zampini default: 178b3cb21ddSStefano Zampini SETERRQ1(PetscObjectComm((PetscObject)F),PETSC_ERR_SUP,"Unhandled MatFactorSchurStatus %D",F->schur_status); 179b3cb21ddSStefano Zampini break; 18059ac8732SStefano Zampini } 181b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,&S,schurstatus);CHKERRQ(ierr); 182b3cb21ddSStefano Zampini ierr = MatDestroy(&B);CHKERRQ(ierr); 183b3cb21ddSStefano Zampini ierr = MatDestroy(&X);CHKERRQ(ierr); 184b5fa320bSStefano Zampini PetscFunctionReturn(0); 185b5fa320bSStefano Zampini } 186b5fa320bSStefano Zampini 187b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsHandleSchur_Private(Mat F, PetscBool expansion) 188b5fa320bSStefano Zampini { 189b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 190b5fa320bSStefano Zampini PetscErrorCode ierr; 191b5fa320bSStefano Zampini 192b5fa320bSStefano Zampini PetscFunctionBegin; 193b5fa320bSStefano Zampini if (!mumps->id.ICNTL(19)) { /* do nothing when Schur complement has not been computed */ 194b5fa320bSStefano Zampini PetscFunctionReturn(0); 195b5fa320bSStefano Zampini } 196b8f61ee1SStefano Zampini if (!expansion) { /* prepare for the condensation step */ 197b5fa320bSStefano Zampini PetscInt sizeredrhs = mumps->id.nrhs*mumps->id.size_schur; 198b5fa320bSStefano Zampini /* allocate MUMPS internal array to store reduced right-hand sides */ 199b5fa320bSStefano Zampini if (!mumps->id.redrhs || sizeredrhs > mumps->sizeredrhs) { 200b5fa320bSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 201b5fa320bSStefano Zampini mumps->id.lredrhs = mumps->id.size_schur; 202b5fa320bSStefano Zampini ierr = PetscMalloc1(mumps->id.nrhs*mumps->id.lredrhs,&mumps->id.redrhs);CHKERRQ(ierr); 203b5fa320bSStefano Zampini mumps->sizeredrhs = mumps->id.nrhs*mumps->id.lredrhs; 204b5fa320bSStefano Zampini } 205b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 1; /* condensation phase */ 206b5fa320bSStefano Zampini } else { /* prepare for the expansion step */ 207b8f61ee1SStefano Zampini /* solve Schur complement (this has to be done by the MUMPS user, so basically us) */ 208b3cb21ddSStefano Zampini ierr = MatMumpsSolveSchur_Private(F);CHKERRQ(ierr); 209b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 2; /* expansion phase */ 2103ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 211b5fa320bSStefano Zampini if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 212b5fa320bSStefano Zampini /* restore defaults */ 213b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 214d3d598ffSStefano Zampini /* free MUMPS internal array for redrhs if we have solved for multiple rhs in order to save memory space */ 215d3d598ffSStefano Zampini if (mumps->id.nrhs > 1) { 216d3d598ffSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 217d3d598ffSStefano Zampini mumps->id.lredrhs = 0; 218d3d598ffSStefano Zampini mumps->sizeredrhs = 0; 219d3d598ffSStefano Zampini } 220b5fa320bSStefano Zampini } 221b5fa320bSStefano Zampini PetscFunctionReturn(0); 222b5fa320bSStefano Zampini } 223b5fa320bSStefano Zampini 224397b6df1SKris Buschelman /* 225d341cd04SHong Zhang MatConvertToTriples_A_B - convert Petsc matrix to triples: row[nz], col[nz], val[nz] 226d341cd04SHong Zhang 227397b6df1SKris Buschelman input: 22867877ebaSShri Abhyankar A - matrix in aij,baij or sbaij (bs=1) format 229397b6df1SKris Buschelman shift - 0: C style output triple; 1: Fortran style output triple. 230bccb9932SShri Abhyankar reuse - MAT_INITIAL_MATRIX: spaces are allocated and values are set for the triple 231bccb9932SShri Abhyankar MAT_REUSE_MATRIX: only the values in v array are updated 232397b6df1SKris Buschelman output: 233397b6df1SKris Buschelman nnz - dim of r, c, and v (number of local nonzero entries of A) 234397b6df1SKris Buschelman r, c, v - row and col index, matrix values (matrix triples) 235eb9baa12SBarry Smith 236eb9baa12SBarry Smith The returned values r, c, and sometimes v are obtained in a single PetscMalloc(). Then in MatDestroy_MUMPS() it is 2377ee00b23SStefano Zampini freed with PetscFree(mumps->irn); This is not ideal code, the fact that v is ONLY sometimes part of mumps->irn means 238eb9baa12SBarry Smith that the PetscMalloc() cannot easily be replaced with a PetscMalloc3(). 239eb9baa12SBarry Smith 240397b6df1SKris Buschelman */ 24116ebf90aSShri Abhyankar 242bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 243b24902e0SBarry Smith { 244185f6596SHong Zhang const PetscInt *ai,*aj,*ajj,M=A->rmap->n; 24567877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 246dfbe8321SBarry Smith PetscErrorCode ierr; 247c1490034SHong Zhang PetscInt *row,*col; 24816ebf90aSShri Abhyankar Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 249397b6df1SKris Buschelman 250397b6df1SKris Buschelman PetscFunctionBegin; 25116ebf90aSShri Abhyankar *v=aa->a; 252bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 2532205254eSKarl Rupp nz = aa->nz; 2542205254eSKarl Rupp ai = aa->i; 2552205254eSKarl Rupp aj = aa->j; 25616ebf90aSShri Abhyankar *nnz = nz; 257785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 258185f6596SHong Zhang col = row + nz; 259185f6596SHong Zhang 26016ebf90aSShri Abhyankar nz = 0; 26116ebf90aSShri Abhyankar for (i=0; i<M; i++) { 26216ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 26367877ebaSShri Abhyankar ajj = aj + ai[i]; 26467877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 26567877ebaSShri Abhyankar row[nz] = i+shift; col[nz++] = ajj[j] + shift; 26616ebf90aSShri Abhyankar } 26716ebf90aSShri Abhyankar } 26816ebf90aSShri Abhyankar *r = row; *c = col; 26916ebf90aSShri Abhyankar } 27016ebf90aSShri Abhyankar PetscFunctionReturn(0); 27116ebf90aSShri Abhyankar } 272397b6df1SKris Buschelman 2737ee00b23SStefano Zampini PetscErrorCode MatConvertToTriples_seqsell_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 2747ee00b23SStefano Zampini { 2757ee00b23SStefano Zampini Mat_SeqSELL *a=(Mat_SeqSELL*)A->data; 2767ee00b23SStefano Zampini PetscInt *ptr; 2777ee00b23SStefano Zampini 2787ee00b23SStefano Zampini PetscFunctionBegin; 2797ee00b23SStefano Zampini *v = a->val; 2807ee00b23SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 2817ee00b23SStefano Zampini PetscInt nz,i,j,row; 2827ee00b23SStefano Zampini PetscErrorCode ierr; 2837ee00b23SStefano Zampini 2847ee00b23SStefano Zampini nz = a->sliidx[a->totalslices]; 2857ee00b23SStefano Zampini *nnz = nz; 2867ee00b23SStefano Zampini ierr = PetscMalloc1(2*nz, &ptr);CHKERRQ(ierr); 2877ee00b23SStefano Zampini *r = ptr; 2887ee00b23SStefano Zampini *c = ptr + nz; 2897ee00b23SStefano Zampini 2907ee00b23SStefano Zampini for (i=0; i<a->totalslices; i++) { 2917ee00b23SStefano Zampini for (j=a->sliidx[i],row=0; j<a->sliidx[i+1]; j++,row=((row+1)&0x07)) { 2927ee00b23SStefano Zampini *ptr++ = 8*i + row + shift; 2937ee00b23SStefano Zampini } 2947ee00b23SStefano Zampini } 2957ee00b23SStefano Zampini for (i=0;i<nz;i++) *ptr++ = a->colidx[i] + shift; 2967ee00b23SStefano Zampini } 2977ee00b23SStefano Zampini PetscFunctionReturn(0); 2987ee00b23SStefano Zampini } 2997ee00b23SStefano Zampini 300bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqbaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 30167877ebaSShri Abhyankar { 30267877ebaSShri Abhyankar Mat_SeqBAIJ *aa=(Mat_SeqBAIJ*)A->data; 30333d57670SJed Brown const PetscInt *ai,*aj,*ajj,bs2 = aa->bs2; 30433d57670SJed Brown PetscInt bs,M,nz,idx=0,rnz,i,j,k,m; 30567877ebaSShri Abhyankar PetscErrorCode ierr; 30667877ebaSShri Abhyankar PetscInt *row,*col; 30767877ebaSShri Abhyankar 30867877ebaSShri Abhyankar PetscFunctionBegin; 30933d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 31033d57670SJed Brown M = A->rmap->N/bs; 311cf3759fdSShri Abhyankar *v = aa->a; 312bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 313cf3759fdSShri Abhyankar ai = aa->i; aj = aa->j; 31467877ebaSShri Abhyankar nz = bs2*aa->nz; 31567877ebaSShri Abhyankar *nnz = nz; 316785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 317185f6596SHong Zhang col = row + nz; 318185f6596SHong Zhang 31967877ebaSShri Abhyankar for (i=0; i<M; i++) { 32067877ebaSShri Abhyankar ajj = aj + ai[i]; 32167877ebaSShri Abhyankar rnz = ai[i+1] - ai[i]; 32267877ebaSShri Abhyankar for (k=0; k<rnz; k++) { 32367877ebaSShri Abhyankar for (j=0; j<bs; j++) { 32467877ebaSShri Abhyankar for (m=0; m<bs; m++) { 32567877ebaSShri Abhyankar row[idx] = i*bs + m + shift; 326cf3759fdSShri Abhyankar col[idx++] = bs*(ajj[k]) + j + shift; 32767877ebaSShri Abhyankar } 32867877ebaSShri Abhyankar } 32967877ebaSShri Abhyankar } 33067877ebaSShri Abhyankar } 331cf3759fdSShri Abhyankar *r = row; *c = col; 33267877ebaSShri Abhyankar } 33367877ebaSShri Abhyankar PetscFunctionReturn(0); 33467877ebaSShri Abhyankar } 33567877ebaSShri Abhyankar 336bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqsbaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 33716ebf90aSShri Abhyankar { 33867877ebaSShri Abhyankar const PetscInt *ai, *aj,*ajj,M=A->rmap->n; 33967877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 34016ebf90aSShri Abhyankar PetscErrorCode ierr; 34116ebf90aSShri Abhyankar PetscInt *row,*col; 34216ebf90aSShri Abhyankar Mat_SeqSBAIJ *aa=(Mat_SeqSBAIJ*)A->data; 34316ebf90aSShri Abhyankar 34416ebf90aSShri Abhyankar PetscFunctionBegin; 345882afa5aSHong Zhang *v = aa->a; 346bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 3472205254eSKarl Rupp nz = aa->nz; 3482205254eSKarl Rupp ai = aa->i; 3492205254eSKarl Rupp aj = aa->j; 3502205254eSKarl Rupp *v = aa->a; 35116ebf90aSShri Abhyankar *nnz = nz; 352785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 353185f6596SHong Zhang col = row + nz; 354185f6596SHong Zhang 35516ebf90aSShri Abhyankar nz = 0; 35616ebf90aSShri Abhyankar for (i=0; i<M; i++) { 35716ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 35867877ebaSShri Abhyankar ajj = aj + ai[i]; 35967877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 36067877ebaSShri Abhyankar row[nz] = i+shift; col[nz++] = ajj[j] + shift; 36116ebf90aSShri Abhyankar } 36216ebf90aSShri Abhyankar } 36316ebf90aSShri Abhyankar *r = row; *c = col; 36416ebf90aSShri Abhyankar } 36516ebf90aSShri Abhyankar PetscFunctionReturn(0); 36616ebf90aSShri Abhyankar } 36716ebf90aSShri Abhyankar 368bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 36916ebf90aSShri Abhyankar { 37067877ebaSShri Abhyankar const PetscInt *ai,*aj,*ajj,*adiag,M=A->rmap->n; 37167877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 37267877ebaSShri Abhyankar const PetscScalar *av,*v1; 37316ebf90aSShri Abhyankar PetscScalar *val; 37416ebf90aSShri Abhyankar PetscErrorCode ierr; 37516ebf90aSShri Abhyankar PetscInt *row,*col; 376829b1710SHong Zhang Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 37729b521d4Sstefano_zampini PetscBool missing; 37816ebf90aSShri Abhyankar 37916ebf90aSShri Abhyankar PetscFunctionBegin; 38016ebf90aSShri Abhyankar ai = aa->i; aj = aa->j; av = aa->a; 38116ebf90aSShri Abhyankar adiag = aa->diag; 38229b521d4Sstefano_zampini ierr = MatMissingDiagonal_SeqAIJ(A,&missing,&i);CHKERRQ(ierr); 383bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 3847ee00b23SStefano Zampini /* count nz in the upper triangular part of A */ 385829b1710SHong Zhang nz = 0; 38629b521d4Sstefano_zampini if (missing) { 38729b521d4Sstefano_zampini for (i=0; i<M; i++) { 38829b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 38929b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 39029b521d4Sstefano_zampini if (aj[j] < i) continue; 39129b521d4Sstefano_zampini nz++; 39229b521d4Sstefano_zampini } 39329b521d4Sstefano_zampini } else { 39429b521d4Sstefano_zampini nz += ai[i+1] - adiag[i]; 39529b521d4Sstefano_zampini } 39629b521d4Sstefano_zampini } 39729b521d4Sstefano_zampini } else { 398829b1710SHong Zhang for (i=0; i<M; i++) nz += ai[i+1] - adiag[i]; 39929b521d4Sstefano_zampini } 40016ebf90aSShri Abhyankar *nnz = nz; 401829b1710SHong Zhang 402185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 403185f6596SHong Zhang col = row + nz; 404185f6596SHong Zhang val = (PetscScalar*)(col + nz); 405185f6596SHong Zhang 40616ebf90aSShri Abhyankar nz = 0; 40729b521d4Sstefano_zampini if (missing) { 40829b521d4Sstefano_zampini for (i=0; i<M; i++) { 40929b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 41029b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 41129b521d4Sstefano_zampini if (aj[j] < i) continue; 41229b521d4Sstefano_zampini row[nz] = i+shift; 41329b521d4Sstefano_zampini col[nz] = aj[j]+shift; 41429b521d4Sstefano_zampini val[nz] = av[j]; 41529b521d4Sstefano_zampini nz++; 41629b521d4Sstefano_zampini } 41729b521d4Sstefano_zampini } else { 41829b521d4Sstefano_zampini rnz = ai[i+1] - adiag[i]; 41929b521d4Sstefano_zampini ajj = aj + adiag[i]; 42029b521d4Sstefano_zampini v1 = av + adiag[i]; 42129b521d4Sstefano_zampini for (j=0; j<rnz; j++) { 42229b521d4Sstefano_zampini row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 42329b521d4Sstefano_zampini } 42429b521d4Sstefano_zampini } 42529b521d4Sstefano_zampini } 42629b521d4Sstefano_zampini } else { 42716ebf90aSShri Abhyankar for (i=0; i<M; i++) { 42816ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 42967877ebaSShri Abhyankar ajj = aj + adiag[i]; 430cf3759fdSShri Abhyankar v1 = av + adiag[i]; 43167877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 43267877ebaSShri Abhyankar row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 43316ebf90aSShri Abhyankar } 43416ebf90aSShri Abhyankar } 43529b521d4Sstefano_zampini } 43616ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 437397b6df1SKris Buschelman } else { 43816ebf90aSShri Abhyankar nz = 0; val = *v; 43929b521d4Sstefano_zampini if (missing) { 44016ebf90aSShri Abhyankar for (i=0; i <M; i++) { 44129b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 44229b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 44329b521d4Sstefano_zampini if (aj[j] < i) continue; 44429b521d4Sstefano_zampini val[nz++] = av[j]; 44529b521d4Sstefano_zampini } 44629b521d4Sstefano_zampini } else { 44716ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 44867877ebaSShri Abhyankar v1 = av + adiag[i]; 44967877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 45067877ebaSShri Abhyankar val[nz++] = v1[j]; 45116ebf90aSShri Abhyankar } 45216ebf90aSShri Abhyankar } 45316ebf90aSShri Abhyankar } 45429b521d4Sstefano_zampini } else { 45516ebf90aSShri Abhyankar for (i=0; i <M; i++) { 45616ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 45716ebf90aSShri Abhyankar v1 = av + adiag[i]; 45816ebf90aSShri Abhyankar for (j=0; j<rnz; j++) { 45916ebf90aSShri Abhyankar val[nz++] = v1[j]; 46016ebf90aSShri Abhyankar } 46116ebf90aSShri Abhyankar } 46216ebf90aSShri Abhyankar } 46329b521d4Sstefano_zampini } 46416ebf90aSShri Abhyankar PetscFunctionReturn(0); 46516ebf90aSShri Abhyankar } 46616ebf90aSShri Abhyankar 467bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpisbaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 46816ebf90aSShri Abhyankar { 46916ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 47016ebf90aSShri Abhyankar PetscErrorCode ierr; 47116ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 47216ebf90aSShri Abhyankar PetscInt *row,*col; 47316ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 47416ebf90aSShri Abhyankar PetscScalar *val; 475397b6df1SKris Buschelman Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)A->data; 476397b6df1SKris Buschelman Mat_SeqSBAIJ *aa = (Mat_SeqSBAIJ*)(mat->A)->data; 477397b6df1SKris Buschelman Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 47816ebf90aSShri Abhyankar 47916ebf90aSShri Abhyankar PetscFunctionBegin; 480d0f46423SBarry Smith ai=aa->i; aj=aa->j; bi=bb->i; bj=bb->j; rstart= A->rmap->rstart; 481397b6df1SKris Buschelman av=aa->a; bv=bb->a; 482397b6df1SKris Buschelman 4832205254eSKarl Rupp garray = mat->garray; 4842205254eSKarl Rupp 485bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 48616ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 48716ebf90aSShri Abhyankar *nnz = nz; 488185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 489185f6596SHong Zhang col = row + nz; 490185f6596SHong Zhang val = (PetscScalar*)(col + nz); 491185f6596SHong Zhang 492397b6df1SKris Buschelman *r = row; *c = col; *v = val; 493397b6df1SKris Buschelman } else { 494397b6df1SKris Buschelman row = *r; col = *c; val = *v; 495397b6df1SKris Buschelman } 496397b6df1SKris Buschelman 497028e57e8SHong Zhang jj = 0; irow = rstart; 498397b6df1SKris Buschelman for (i=0; i<m; i++) { 499397b6df1SKris Buschelman ajj = aj + ai[i]; /* ptr to the beginning of this row */ 500397b6df1SKris Buschelman countA = ai[i+1] - ai[i]; 501397b6df1SKris Buschelman countB = bi[i+1] - bi[i]; 502397b6df1SKris Buschelman bjj = bj + bi[i]; 50316ebf90aSShri Abhyankar v1 = av + ai[i]; 50416ebf90aSShri Abhyankar v2 = bv + bi[i]; 505397b6df1SKris Buschelman 506397b6df1SKris Buschelman /* A-part */ 507397b6df1SKris Buschelman for (j=0; j<countA; j++) { 508bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 509397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 510397b6df1SKris Buschelman } 51116ebf90aSShri Abhyankar val[jj++] = v1[j]; 512397b6df1SKris Buschelman } 51316ebf90aSShri Abhyankar 51416ebf90aSShri Abhyankar /* B-part */ 51516ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 516bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 517397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 518397b6df1SKris Buschelman } 51916ebf90aSShri Abhyankar val[jj++] = v2[j]; 52016ebf90aSShri Abhyankar } 52116ebf90aSShri Abhyankar irow++; 52216ebf90aSShri Abhyankar } 52316ebf90aSShri Abhyankar PetscFunctionReturn(0); 52416ebf90aSShri Abhyankar } 52516ebf90aSShri Abhyankar 526bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 52716ebf90aSShri Abhyankar { 52816ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 52916ebf90aSShri Abhyankar PetscErrorCode ierr; 53016ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 53116ebf90aSShri Abhyankar PetscInt *row,*col; 53216ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 53316ebf90aSShri Abhyankar PetscScalar *val; 53416ebf90aSShri Abhyankar Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 53516ebf90aSShri Abhyankar Mat_SeqAIJ *aa = (Mat_SeqAIJ*)(mat->A)->data; 53616ebf90aSShri Abhyankar Mat_SeqAIJ *bb = (Mat_SeqAIJ*)(mat->B)->data; 53716ebf90aSShri Abhyankar 53816ebf90aSShri Abhyankar PetscFunctionBegin; 53916ebf90aSShri Abhyankar ai=aa->i; aj=aa->j; bi=bb->i; bj=bb->j; rstart= A->rmap->rstart; 54016ebf90aSShri Abhyankar av=aa->a; bv=bb->a; 54116ebf90aSShri Abhyankar 5422205254eSKarl Rupp garray = mat->garray; 5432205254eSKarl Rupp 544bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 54516ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 54616ebf90aSShri Abhyankar *nnz = nz; 547185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 548185f6596SHong Zhang col = row + nz; 549185f6596SHong Zhang val = (PetscScalar*)(col + nz); 550185f6596SHong Zhang 55116ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 55216ebf90aSShri Abhyankar } else { 55316ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 55416ebf90aSShri Abhyankar } 55516ebf90aSShri Abhyankar 55616ebf90aSShri Abhyankar jj = 0; irow = rstart; 55716ebf90aSShri Abhyankar for (i=0; i<m; i++) { 55816ebf90aSShri Abhyankar ajj = aj + ai[i]; /* ptr to the beginning of this row */ 55916ebf90aSShri Abhyankar countA = ai[i+1] - ai[i]; 56016ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 56116ebf90aSShri Abhyankar bjj = bj + bi[i]; 56216ebf90aSShri Abhyankar v1 = av + ai[i]; 56316ebf90aSShri Abhyankar v2 = bv + bi[i]; 56416ebf90aSShri Abhyankar 56516ebf90aSShri Abhyankar /* A-part */ 56616ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 567bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 56816ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 56916ebf90aSShri Abhyankar } 57016ebf90aSShri Abhyankar val[jj++] = v1[j]; 57116ebf90aSShri Abhyankar } 57216ebf90aSShri Abhyankar 57316ebf90aSShri Abhyankar /* B-part */ 57416ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 575bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 57616ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 57716ebf90aSShri Abhyankar } 57816ebf90aSShri Abhyankar val[jj++] = v2[j]; 57916ebf90aSShri Abhyankar } 58016ebf90aSShri Abhyankar irow++; 58116ebf90aSShri Abhyankar } 58216ebf90aSShri Abhyankar PetscFunctionReturn(0); 58316ebf90aSShri Abhyankar } 58416ebf90aSShri Abhyankar 585bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpibaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 58667877ebaSShri Abhyankar { 58767877ebaSShri Abhyankar Mat_MPIBAIJ *mat = (Mat_MPIBAIJ*)A->data; 58867877ebaSShri Abhyankar Mat_SeqBAIJ *aa = (Mat_SeqBAIJ*)(mat->A)->data; 58967877ebaSShri Abhyankar Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 59067877ebaSShri Abhyankar const PetscInt *ai = aa->i, *bi = bb->i, *aj = aa->j, *bj = bb->j,*ajj, *bjj; 591d985c460SShri Abhyankar const PetscInt *garray = mat->garray,mbs=mat->mbs,rstart=A->rmap->rstart; 59233d57670SJed Brown const PetscInt bs2=mat->bs2; 59367877ebaSShri Abhyankar PetscErrorCode ierr; 59433d57670SJed Brown PetscInt bs,nz,i,j,k,n,jj,irow,countA,countB,idx; 59567877ebaSShri Abhyankar PetscInt *row,*col; 59667877ebaSShri Abhyankar const PetscScalar *av=aa->a, *bv=bb->a,*v1,*v2; 59767877ebaSShri Abhyankar PetscScalar *val; 59867877ebaSShri Abhyankar 59967877ebaSShri Abhyankar PetscFunctionBegin; 60033d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 601bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 60267877ebaSShri Abhyankar nz = bs2*(aa->nz + bb->nz); 60367877ebaSShri Abhyankar *nnz = nz; 604185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 605185f6596SHong Zhang col = row + nz; 606185f6596SHong Zhang val = (PetscScalar*)(col + nz); 607185f6596SHong Zhang 60867877ebaSShri Abhyankar *r = row; *c = col; *v = val; 60967877ebaSShri Abhyankar } else { 61067877ebaSShri Abhyankar row = *r; col = *c; val = *v; 61167877ebaSShri Abhyankar } 61267877ebaSShri Abhyankar 613d985c460SShri Abhyankar jj = 0; irow = rstart; 61467877ebaSShri Abhyankar for (i=0; i<mbs; i++) { 61567877ebaSShri Abhyankar countA = ai[i+1] - ai[i]; 61667877ebaSShri Abhyankar countB = bi[i+1] - bi[i]; 61767877ebaSShri Abhyankar ajj = aj + ai[i]; 61867877ebaSShri Abhyankar bjj = bj + bi[i]; 61967877ebaSShri Abhyankar v1 = av + bs2*ai[i]; 62067877ebaSShri Abhyankar v2 = bv + bs2*bi[i]; 62167877ebaSShri Abhyankar 62267877ebaSShri Abhyankar idx = 0; 62367877ebaSShri Abhyankar /* A-part */ 62467877ebaSShri Abhyankar for (k=0; k<countA; k++) { 62567877ebaSShri Abhyankar for (j=0; j<bs; j++) { 62667877ebaSShri Abhyankar for (n=0; n<bs; n++) { 627bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 628d985c460SShri Abhyankar row[jj] = irow + n + shift; 629d985c460SShri Abhyankar col[jj] = rstart + bs*ajj[k] + j + shift; 63067877ebaSShri Abhyankar } 63167877ebaSShri Abhyankar val[jj++] = v1[idx++]; 63267877ebaSShri Abhyankar } 63367877ebaSShri Abhyankar } 63467877ebaSShri Abhyankar } 63567877ebaSShri Abhyankar 63667877ebaSShri Abhyankar idx = 0; 63767877ebaSShri Abhyankar /* B-part */ 63867877ebaSShri Abhyankar for (k=0; k<countB; k++) { 63967877ebaSShri Abhyankar for (j=0; j<bs; j++) { 64067877ebaSShri Abhyankar for (n=0; n<bs; n++) { 641bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 642d985c460SShri Abhyankar row[jj] = irow + n + shift; 643d985c460SShri Abhyankar col[jj] = bs*garray[bjj[k]] + j + shift; 64467877ebaSShri Abhyankar } 645d985c460SShri Abhyankar val[jj++] = v2[idx++]; 64667877ebaSShri Abhyankar } 64767877ebaSShri Abhyankar } 64867877ebaSShri Abhyankar } 649d985c460SShri Abhyankar irow += bs; 65067877ebaSShri Abhyankar } 65167877ebaSShri Abhyankar PetscFunctionReturn(0); 65267877ebaSShri Abhyankar } 65367877ebaSShri Abhyankar 654bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 65516ebf90aSShri Abhyankar { 65616ebf90aSShri Abhyankar const PetscInt *ai, *aj,*adiag, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 65716ebf90aSShri Abhyankar PetscErrorCode ierr; 658e0bace9bSHong Zhang PetscInt rstart,nz,nza,nzb,i,j,jj,irow,countA,countB; 65916ebf90aSShri Abhyankar PetscInt *row,*col; 66016ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 66116ebf90aSShri Abhyankar PetscScalar *val; 66216ebf90aSShri Abhyankar Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 66316ebf90aSShri Abhyankar Mat_SeqAIJ *aa =(Mat_SeqAIJ*)(mat->A)->data; 66416ebf90aSShri Abhyankar Mat_SeqAIJ *bb =(Mat_SeqAIJ*)(mat->B)->data; 66516ebf90aSShri Abhyankar 66616ebf90aSShri Abhyankar PetscFunctionBegin; 66716ebf90aSShri Abhyankar ai=aa->i; aj=aa->j; adiag=aa->diag; 66816ebf90aSShri Abhyankar bi=bb->i; bj=bb->j; garray = mat->garray; 66916ebf90aSShri Abhyankar av=aa->a; bv=bb->a; 6702205254eSKarl Rupp 67116ebf90aSShri Abhyankar rstart = A->rmap->rstart; 67216ebf90aSShri Abhyankar 673bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 674e0bace9bSHong Zhang nza = 0; /* num of upper triangular entries in mat->A, including diagonals */ 675e0bace9bSHong Zhang nzb = 0; /* num of upper triangular entries in mat->B */ 67616ebf90aSShri Abhyankar for (i=0; i<m; i++) { 677e0bace9bSHong Zhang nza += (ai[i+1] - adiag[i]); 67816ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 67916ebf90aSShri Abhyankar bjj = bj + bi[i]; 680e0bace9bSHong Zhang for (j=0; j<countB; j++) { 681e0bace9bSHong Zhang if (garray[bjj[j]] > rstart) nzb++; 682e0bace9bSHong Zhang } 683e0bace9bSHong Zhang } 68416ebf90aSShri Abhyankar 685e0bace9bSHong Zhang nz = nza + nzb; /* total nz of upper triangular part of mat */ 68616ebf90aSShri Abhyankar *nnz = nz; 687185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 688185f6596SHong Zhang col = row + nz; 689185f6596SHong Zhang val = (PetscScalar*)(col + nz); 690185f6596SHong Zhang 69116ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 69216ebf90aSShri Abhyankar } else { 69316ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 69416ebf90aSShri Abhyankar } 69516ebf90aSShri Abhyankar 69616ebf90aSShri Abhyankar jj = 0; irow = rstart; 69716ebf90aSShri Abhyankar for (i=0; i<m; i++) { 69816ebf90aSShri Abhyankar ajj = aj + adiag[i]; /* ptr to the beginning of the diagonal of this row */ 69916ebf90aSShri Abhyankar v1 = av + adiag[i]; 70016ebf90aSShri Abhyankar countA = ai[i+1] - adiag[i]; 70116ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 70216ebf90aSShri Abhyankar bjj = bj + bi[i]; 70316ebf90aSShri Abhyankar v2 = bv + bi[i]; 70416ebf90aSShri Abhyankar 70516ebf90aSShri Abhyankar /* A-part */ 70616ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 707bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 70816ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 70916ebf90aSShri Abhyankar } 71016ebf90aSShri Abhyankar val[jj++] = v1[j]; 71116ebf90aSShri Abhyankar } 71216ebf90aSShri Abhyankar 71316ebf90aSShri Abhyankar /* B-part */ 71416ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 71516ebf90aSShri Abhyankar if (garray[bjj[j]] > rstart) { 716bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 71716ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 71816ebf90aSShri Abhyankar } 71916ebf90aSShri Abhyankar val[jj++] = v2[j]; 72016ebf90aSShri Abhyankar } 721397b6df1SKris Buschelman } 722397b6df1SKris Buschelman irow++; 723397b6df1SKris Buschelman } 724397b6df1SKris Buschelman PetscFunctionReturn(0); 725397b6df1SKris Buschelman } 726397b6df1SKris Buschelman 727dfbe8321SBarry Smith PetscErrorCode MatDestroy_MUMPS(Mat A) 728dfbe8321SBarry Smith { 729e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 730dfbe8321SBarry Smith PetscErrorCode ierr; 731b24902e0SBarry Smith 732397b6df1SKris Buschelman PetscFunctionBegin; 733a5e57a09SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 734a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_rhs);CHKERRQ(ierr); 735a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 736801fbe65SHong Zhang ierr = VecDestroy(&mumps->b_seq);CHKERRQ(ierr); 737a5e57a09SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 738a5e57a09SHong Zhang ierr = PetscFree(mumps->id.perm_in);CHKERRQ(ierr); 739a5e57a09SHong Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); 740b34f08ffSHong Zhang ierr = PetscFree(mumps->info);CHKERRQ(ierr); 74159ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 742a5e57a09SHong Zhang mumps->id.job = JOB_END; 7433ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 7443ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 7453ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { ierr = PetscOmpCtrlDestroy(&mumps->omp_ctrl);CHKERRQ(ierr); } 7463ab56b82SJunchao Zhang #endif 7473ab56b82SJunchao Zhang ierr = PetscFree2(mumps->recvcount,mumps->displs);CHKERRQ(ierr); 748e69c285eSBarry Smith ierr = PetscFree(A->data);CHKERRQ(ierr); 749bf0cc555SLisandro Dalcin 75097969023SHong Zhang /* clear composed functions */ 7513ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 7525a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSetSchurIS_C",NULL);CHKERRQ(ierr); 7535a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorCreateSchurComplement_C",NULL);CHKERRQ(ierr); 754bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetIcntl_C",NULL);CHKERRQ(ierr); 755bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetIcntl_C",NULL);CHKERRQ(ierr); 756bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetCntl_C",NULL);CHKERRQ(ierr); 757bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetCntl_C",NULL);CHKERRQ(ierr); 758ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfo_C",NULL);CHKERRQ(ierr); 759ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfog_C",NULL);CHKERRQ(ierr); 760ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfo_C",NULL);CHKERRQ(ierr); 761ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfog_C",NULL);CHKERRQ(ierr); 76289a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverse_C",NULL);CHKERRQ(ierr); 7630e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverseTranspose_C",NULL);CHKERRQ(ierr); 764397b6df1SKris Buschelman PetscFunctionReturn(0); 765397b6df1SKris Buschelman } 766397b6df1SKris Buschelman 767b24902e0SBarry Smith PetscErrorCode MatSolve_MUMPS(Mat A,Vec b,Vec x) 768b24902e0SBarry Smith { 769e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 770d54de34fSKris Buschelman PetscScalar *array; 77167877ebaSShri Abhyankar Vec b_seq; 772329ec9b3SHong Zhang IS is_iden,is_petsc; 773dfbe8321SBarry Smith PetscErrorCode ierr; 774329ec9b3SHong Zhang PetscInt i; 775cc86f929SStefano Zampini PetscBool second_solve = PETSC_FALSE; 776883f2eb9SBarry Smith static PetscBool cite1 = PETSC_FALSE,cite2 = PETSC_FALSE; 777397b6df1SKris Buschelman 778397b6df1SKris Buschelman PetscFunctionBegin; 779883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS01,\n author = {P.~R. Amestoy and I.~S. Duff and J.-Y. L'Excellent and J. Koster},\n title = {A fully asynchronous multifrontal solver using distributed dynamic scheduling},\n journal = {SIAM Journal on Matrix Analysis and Applications},\n volume = {23},\n number = {1},\n pages = {15--41},\n year = {2001}\n}\n",&cite1);CHKERRQ(ierr); 780883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS02,\n author = {P.~R. Amestoy and A. Guermouche and J.-Y. L'Excellent and S. Pralet},\n title = {Hybrid scheduling for the parallel solution of linear systems},\n journal = {Parallel Computing},\n volume = {32},\n number = {2},\n pages = {136--156},\n year = {2006}\n}\n",&cite2);CHKERRQ(ierr); 7812aca8efcSHong Zhang 782603e8f96SBarry Smith if (A->factorerrortype) { 7832aca8efcSHong Zhang ierr = PetscInfo2(A,"MatSolve is called with singular matrix factor, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 7842aca8efcSHong Zhang ierr = VecSetInf(x);CHKERRQ(ierr); 7852aca8efcSHong Zhang PetscFunctionReturn(0); 7862aca8efcSHong Zhang } 7872aca8efcSHong Zhang 788be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 789a5e57a09SHong Zhang mumps->id.nrhs = 1; 790a5e57a09SHong Zhang b_seq = mumps->b_seq; 7912d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 792329ec9b3SHong Zhang /* MUMPS only supports centralized rhs. Scatter b into a seqential rhs vector */ 793a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 794a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 795a5e57a09SHong Zhang if (!mumps->myid) {ierr = VecGetArray(b_seq,&array);CHKERRQ(ierr);} 7963ab56b82SJunchao Zhang } else { /* petsc_size == 1 */ 797397b6df1SKris Buschelman ierr = VecCopy(b,x);CHKERRQ(ierr); 798397b6df1SKris Buschelman ierr = VecGetArray(x,&array);CHKERRQ(ierr); 799397b6df1SKris Buschelman } 800a5e57a09SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 801a5e57a09SHong Zhang mumps->id.nrhs = 1; 802940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)array; 803397b6df1SKris Buschelman } 804397b6df1SKris Buschelman 805cc86f929SStefano Zampini /* 806cc86f929SStefano Zampini handle condensation step of Schur complement (if any) 807cc86f929SStefano Zampini We set by default ICNTL(26) == -1 when Schur indices have been provided by the user. 808cc86f929SStefano Zampini According to MUMPS (5.0.0) manual, any value should be harmful during the factorization phase 809cc86f929SStefano Zampini Unless the user provides a valid value for ICNTL(26), MatSolve and MatMatSolve routines solve the full system. 810cc86f929SStefano Zampini This requires an extra call to PetscMUMPS_c and the computation of the factors for S 811cc86f929SStefano Zampini */ 812583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 8132d4298aeSJunchao Zhang if (mumps->petsc_size > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 814cc86f929SStefano Zampini second_solve = PETSC_TRUE; 815b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 816cc86f929SStefano Zampini } 817397b6df1SKris Buschelman /* solve phase */ 818329ec9b3SHong Zhang /*-------------*/ 819a5e57a09SHong Zhang mumps->id.job = JOB_SOLVE; 8203ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 821a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 822397b6df1SKris Buschelman 823b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 824cc86f929SStefano Zampini if (second_solve) { 825b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 826cc86f929SStefano Zampini } 827b5fa320bSStefano Zampini 8282d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { /* convert mumps distributed solution to petsc mpi x */ 829a5e57a09SHong Zhang if (mumps->scat_sol && mumps->ICNTL9_pre != mumps->id.ICNTL(9)) { 830a5e57a09SHong Zhang /* when id.ICNTL(9) changes, the contents of lsol_loc may change (not its size, lsol_loc), recreates scat_sol */ 831a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 832397b6df1SKris Buschelman } 833a5e57a09SHong Zhang if (!mumps->scat_sol) { /* create scatter scat_sol */ 834a5e57a09SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,mumps->id.lsol_loc,0,1,&is_iden);CHKERRQ(ierr); /* from */ 835a5e57a09SHong Zhang for (i=0; i<mumps->id.lsol_loc; i++) { 836a5e57a09SHong Zhang mumps->id.isol_loc[i] -= 1; /* change Fortran style to C style */ 837a5e57a09SHong Zhang } 838a5e57a09SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,mumps->id.lsol_loc,mumps->id.isol_loc,PETSC_COPY_VALUES,&is_petsc);CHKERRQ(ierr); /* to */ 8399448b7f1SJunchao Zhang ierr = VecScatterCreate(mumps->x_seq,is_iden,x,is_petsc,&mumps->scat_sol);CHKERRQ(ierr); 8406bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 8416bf464f9SBarry Smith ierr = ISDestroy(&is_petsc);CHKERRQ(ierr); 8422205254eSKarl Rupp 843a5e57a09SHong Zhang mumps->ICNTL9_pre = mumps->id.ICNTL(9); /* save current value of id.ICNTL(9) */ 844397b6df1SKris Buschelman } 845a5e57a09SHong Zhang 846a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 847a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 848329ec9b3SHong Zhang } 849353d7d71SJunchao Zhang 850353d7d71SJunchao Zhang if (mumps->petsc_size > 1) {if (!mumps->myid) {ierr = VecRestoreArray(b_seq,&array);CHKERRQ(ierr);}} 851353d7d71SJunchao Zhang else {ierr = VecRestoreArray(x,&array);CHKERRQ(ierr);} 852353d7d71SJunchao Zhang 8539880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*mumps->id.RINFO(3));CHKERRQ(ierr); 854397b6df1SKris Buschelman PetscFunctionReturn(0); 855397b6df1SKris Buschelman } 856397b6df1SKris Buschelman 85751d5961aSHong Zhang PetscErrorCode MatSolveTranspose_MUMPS(Mat A,Vec b,Vec x) 85851d5961aSHong Zhang { 859e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 86051d5961aSHong Zhang PetscErrorCode ierr; 86151d5961aSHong Zhang 86251d5961aSHong Zhang PetscFunctionBegin; 863a5e57a09SHong Zhang mumps->id.ICNTL(9) = 0; 8640ad0caddSJed Brown ierr = MatSolve_MUMPS(A,b,x);CHKERRQ(ierr); 865a5e57a09SHong Zhang mumps->id.ICNTL(9) = 1; 86651d5961aSHong Zhang PetscFunctionReturn(0); 86751d5961aSHong Zhang } 86851d5961aSHong Zhang 869e0b74bf9SHong Zhang PetscErrorCode MatMatSolve_MUMPS(Mat A,Mat B,Mat X) 870e0b74bf9SHong Zhang { 871bda8bf91SBarry Smith PetscErrorCode ierr; 872b8491c3eSStefano Zampini Mat Bt = NULL; 873b8491c3eSStefano Zampini PetscBool flg, flgT; 874e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 875334c5f61SHong Zhang PetscInt i,nrhs,M; 8761683a169SBarry Smith PetscScalar *array; 8771683a169SBarry Smith const PetscScalar *rbray; 8785b7de3c2SKarl Rupp PetscInt lsol_loc,nlsol_loc,*isol_loc,*idxx,*isol_loc_save,iidx = 0; 8791683a169SBarry Smith PetscScalar *bray,*sol_loc,*sol_loc_save; 880be818407SHong Zhang IS is_to,is_from; 881beae5ec0SHong Zhang PetscInt k,proc,j,m,myrstart; 882be818407SHong Zhang const PetscInt *rstart; 883beae5ec0SHong Zhang Vec v_mpi,b_seq,msol_loc; 884be818407SHong Zhang VecScatter scat_rhs,scat_sol; 885be818407SHong Zhang PetscScalar *aa; 886be818407SHong Zhang PetscInt spnr,*ia,*ja; 887d56c302dSHong Zhang Mat_MPIAIJ *b = NULL; 888bda8bf91SBarry Smith 889e0b74bf9SHong Zhang PetscFunctionBegin; 890be818407SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)X,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 891be818407SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_ARG_WRONG,"Matrix X must be MATDENSE matrix"); 892be818407SHong Zhang 8930298fd71SBarry Smith ierr = PetscObjectTypeCompareAny((PetscObject)B,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 894be818407SHong Zhang if (flg) { /* dense B */ 895c0be3364SHong Zhang if (B->rmap->n != X->rmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Matrix B and X must have same row distribution"); 896be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 8970e6b8875SHong Zhang } else { /* sparse B */ 898be818407SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)B,MATTRANSPOSEMAT,&flgT);CHKERRQ(ierr); 8990e6b8875SHong Zhang if (flgT) { /* input B is transpose of actural RHS matrix, 9000e6b8875SHong Zhang because mumps requires sparse compressed COLUMN storage! See MatMatTransposeSolve_MUMPS() */ 901be818407SHong Zhang ierr = MatTransposeGetMat(B,&Bt);CHKERRQ(ierr); 9020f52d626SJunchao Zhang } else SETERRQ(PetscObjectComm((PetscObject)B),PETSC_ERR_ARG_WRONG,"Matrix B must be MATTRANSPOSEMAT matrix"); 903be818407SHong Zhang mumps->id.ICNTL(20)= 1; /* sparse RHS */ 904b8491c3eSStefano Zampini } 90587b22cf4SHong Zhang 9069481e6e9SHong Zhang ierr = MatGetSize(B,&M,&nrhs);CHKERRQ(ierr); 9079481e6e9SHong Zhang mumps->id.nrhs = nrhs; 9089481e6e9SHong Zhang mumps->id.lrhs = M; 9092b691707SHong Zhang mumps->id.rhs = NULL; 9109481e6e9SHong Zhang 9112d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 912b8491c3eSStefano Zampini PetscScalar *aa; 913b8491c3eSStefano Zampini PetscInt spnr,*ia,*ja; 914e94cce23SStefano Zampini PetscBool second_solve = PETSC_FALSE; 915b8491c3eSStefano Zampini 9162cd7d884SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 917b8491c3eSStefano Zampini mumps->id.rhs = (MumpsScalar*)array; 9182b691707SHong Zhang 9192b691707SHong Zhang if (!Bt) { /* dense B */ 9202b691707SHong Zhang /* copy B to X */ 9211683a169SBarry Smith ierr = MatDenseGetArrayRead(B,&rbray);CHKERRQ(ierr); 9221683a169SBarry Smith ierr = PetscMemcpy(array,rbray,M*nrhs*sizeof(PetscScalar));CHKERRQ(ierr); 9231683a169SBarry Smith ierr = MatDenseRestoreArrayRead(B,&rbray);CHKERRQ(ierr); 9242b691707SHong Zhang } else { /* sparse B */ 925b8491c3eSStefano Zampini ierr = MatSeqAIJGetArray(Bt,&aa);CHKERRQ(ierr); 926be818407SHong Zhang ierr = MatGetRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 927c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 9282b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 929b8491c3eSStefano Zampini mumps->id.irhs_ptr = ia; 930b8491c3eSStefano Zampini mumps->id.irhs_sparse = ja; 931b8491c3eSStefano Zampini mumps->id.nz_rhs = ia[spnr] - 1; 932b8491c3eSStefano Zampini mumps->id.rhs_sparse = (MumpsScalar*)aa; 933b8491c3eSStefano Zampini } 934e94cce23SStefano Zampini /* handle condensation step of Schur complement (if any) */ 935583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 936e94cce23SStefano Zampini second_solve = PETSC_TRUE; 937b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 938e94cce23SStefano Zampini } 9392cd7d884SHong Zhang /* solve phase */ 9402cd7d884SHong Zhang /*-------------*/ 9412cd7d884SHong Zhang mumps->id.job = JOB_SOLVE; 9423ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 9432cd7d884SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 944b5fa320bSStefano Zampini 945b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 946e94cce23SStefano Zampini if (second_solve) { 947b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 948e94cce23SStefano Zampini } 9492b691707SHong Zhang if (Bt) { /* sparse B */ 950b8491c3eSStefano Zampini ierr = MatSeqAIJRestoreArray(Bt,&aa);CHKERRQ(ierr); 951be818407SHong Zhang ierr = MatRestoreRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 952c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 953b8491c3eSStefano Zampini } 9542cd7d884SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 955be818407SHong Zhang PetscFunctionReturn(0); 956be818407SHong Zhang } 957801fbe65SHong Zhang 958be818407SHong Zhang /*--------- parallel case: MUMPS requires rhs B to be centralized on the host! --------*/ 9592d4298aeSJunchao Zhang if (mumps->petsc_size > 1 && mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 960241dbb5eSStefano Zampini 961beae5ec0SHong Zhang /* create msol_loc to hold mumps local solution */ 9621683a169SBarry Smith isol_loc_save = mumps->id.isol_loc; /* save it for MatSolve() */ 9631683a169SBarry Smith sol_loc_save = (PetscScalar*)mumps->id.sol_loc; 964801fbe65SHong Zhang 965a1dfcbd9SJunchao Zhang lsol_loc = mumps->id.lsol_loc; 96671aed81dSHong Zhang nlsol_loc = nrhs*lsol_loc; /* length of sol_loc */ 967a1dfcbd9SJunchao Zhang ierr = PetscMalloc2(nlsol_loc,&sol_loc,lsol_loc,&isol_loc);CHKERRQ(ierr); 968940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 969801fbe65SHong Zhang mumps->id.isol_loc = isol_loc; 970801fbe65SHong Zhang 971beae5ec0SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,nlsol_loc,(PetscScalar*)sol_loc,&msol_loc);CHKERRQ(ierr); 9722cd7d884SHong Zhang 9732b691707SHong Zhang if (!Bt) { /* dense B */ 974beae5ec0SHong Zhang /* scatter v_mpi to b_seq because MUMPS only supports centralized rhs */ 975be818407SHong Zhang /* wrap dense rhs matrix B into a vector v_mpi */ 9762b691707SHong Zhang ierr = MatGetLocalSize(B,&m,NULL);CHKERRQ(ierr); 9772b691707SHong Zhang ierr = MatDenseGetArray(B,&bray);CHKERRQ(ierr); 9782b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)B),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 9792b691707SHong Zhang ierr = MatDenseRestoreArray(B,&bray);CHKERRQ(ierr); 9802b691707SHong Zhang 981be818407SHong Zhang /* scatter v_mpi to b_seq in proc[0]. MUMPS requires rhs to be centralized on the host! */ 982801fbe65SHong Zhang if (!mumps->myid) { 983beae5ec0SHong Zhang PetscInt *idx; 984beae5ec0SHong Zhang /* idx: maps from k-th index of v_mpi to (i,j)-th global entry of B */ 985beae5ec0SHong Zhang ierr = PetscMalloc1(nrhs*M,&idx);CHKERRQ(ierr); 986be818407SHong Zhang ierr = MatGetOwnershipRanges(B,&rstart);CHKERRQ(ierr); 987be818407SHong Zhang k = 0; 9882d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 989be818407SHong Zhang for (j=0; j<nrhs; j++){ 990beae5ec0SHong Zhang for (i=rstart[proc]; i<rstart[proc+1]; i++) idx[k++] = j*M + i; 991be818407SHong Zhang } 992be818407SHong Zhang } 993be818407SHong Zhang 994334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,nrhs*M,&b_seq);CHKERRQ(ierr); 995beae5ec0SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nrhs*M,idx,PETSC_OWN_POINTER,&is_to);CHKERRQ(ierr); 996801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nrhs*M,0,1,&is_from);CHKERRQ(ierr); 997801fbe65SHong Zhang } else { 998334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&b_seq);CHKERRQ(ierr); 999801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_to);CHKERRQ(ierr); 1000801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_from);CHKERRQ(ierr); 1001801fbe65SHong Zhang } 10029448b7f1SJunchao Zhang ierr = VecScatterCreate(v_mpi,is_from,b_seq,is_to,&scat_rhs);CHKERRQ(ierr); 1003334c5f61SHong Zhang ierr = VecScatterBegin(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1004801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1005801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1006334c5f61SHong Zhang ierr = VecScatterEnd(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1007801fbe65SHong Zhang 1008801fbe65SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 1009334c5f61SHong Zhang ierr = VecGetArray(b_seq,&bray);CHKERRQ(ierr); 1010940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)bray; 1011334c5f61SHong Zhang ierr = VecRestoreArray(b_seq,&bray);CHKERRQ(ierr); 1012801fbe65SHong Zhang } 1013801fbe65SHong Zhang 10142b691707SHong Zhang } else { /* sparse B */ 10152b691707SHong Zhang b = (Mat_MPIAIJ*)Bt->data; 10162b691707SHong Zhang 1017be818407SHong Zhang /* wrap dense X into a vector v_mpi */ 10182b691707SHong Zhang ierr = MatGetLocalSize(X,&m,NULL);CHKERRQ(ierr); 10192b691707SHong Zhang ierr = MatDenseGetArray(X,&bray);CHKERRQ(ierr); 10202b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)X),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 10212b691707SHong Zhang ierr = MatDenseRestoreArray(X,&bray);CHKERRQ(ierr); 10222b691707SHong Zhang 10232b691707SHong Zhang if (!mumps->myid) { 10242b691707SHong Zhang ierr = MatSeqAIJGetArray(b->A,&aa);CHKERRQ(ierr); 1025be818407SHong Zhang ierr = MatGetRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1026c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 10272b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 10282b691707SHong Zhang mumps->id.irhs_ptr = ia; 10292b691707SHong Zhang mumps->id.irhs_sparse = ja; 10302b691707SHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 10312b691707SHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 10322b691707SHong Zhang } else { 10332b691707SHong Zhang mumps->id.irhs_ptr = NULL; 10342b691707SHong Zhang mumps->id.irhs_sparse = NULL; 10352b691707SHong Zhang mumps->id.nz_rhs = 0; 10362b691707SHong Zhang mumps->id.rhs_sparse = NULL; 10372b691707SHong Zhang } 10382b691707SHong Zhang } 10392b691707SHong Zhang 1040801fbe65SHong Zhang /* solve phase */ 1041801fbe65SHong Zhang /*-------------*/ 1042801fbe65SHong Zhang mumps->id.job = JOB_SOLVE; 10433ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1044801fbe65SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 1045801fbe65SHong Zhang 1046334c5f61SHong Zhang /* scatter mumps distributed solution to petsc vector v_mpi, which shares local arrays with solution matrix X */ 104774f0fcc7SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 104874f0fcc7SHong Zhang ierr = VecPlaceArray(v_mpi,array);CHKERRQ(ierr); 1049801fbe65SHong Zhang 1050334c5f61SHong Zhang /* create scatter scat_sol */ 1051be818407SHong Zhang ierr = MatGetOwnershipRanges(X,&rstart);CHKERRQ(ierr); 1052beae5ec0SHong Zhang /* iidx: index for scatter mumps solution to petsc X */ 1053beae5ec0SHong Zhang 1054beae5ec0SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nlsol_loc,0,1,&is_from);CHKERRQ(ierr); 1055beae5ec0SHong Zhang ierr = PetscMalloc1(nlsol_loc,&idxx);CHKERRQ(ierr); 1056beae5ec0SHong Zhang for (i=0; i<lsol_loc; i++) { 1057beae5ec0SHong Zhang isol_loc[i] -= 1; /* change Fortran style to C style. isol_loc[i+j*lsol_loc] contains x[isol_loc[i]] in j-th vector */ 1058beae5ec0SHong Zhang 10592d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 1060beae5ec0SHong Zhang if (isol_loc[i] >= rstart[proc] && isol_loc[i] < rstart[proc+1]) { 1061beae5ec0SHong Zhang myrstart = rstart[proc]; 1062beae5ec0SHong Zhang k = isol_loc[i] - myrstart; /* local index on 1st column of petsc vector X */ 1063beae5ec0SHong Zhang iidx = k + myrstart*nrhs; /* maps mumps isol_loc[i] to petsc index in X */ 1064beae5ec0SHong Zhang m = rstart[proc+1] - rstart[proc]; /* rows of X for this proc */ 1065beae5ec0SHong Zhang break; 1066be818407SHong Zhang } 1067be818407SHong Zhang } 1068be818407SHong Zhang 1069beae5ec0SHong Zhang for (j=0; j<nrhs; j++) idxx[i+j*lsol_loc] = iidx + j*m; 1070801fbe65SHong Zhang } 1071be818407SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nlsol_loc,idxx,PETSC_COPY_VALUES,&is_to);CHKERRQ(ierr); 1072beae5ec0SHong Zhang ierr = VecScatterCreate(msol_loc,is_from,v_mpi,is_to,&scat_sol);CHKERRQ(ierr); 1073beae5ec0SHong Zhang ierr = VecScatterBegin(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1074801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1075801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1076beae5ec0SHong Zhang ierr = VecScatterEnd(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1077801fbe65SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 107871aed81dSHong Zhang 107971aed81dSHong Zhang /* free spaces */ 10801683a169SBarry Smith mumps->id.sol_loc = (MumpsScalar*)sol_loc_save; 108171aed81dSHong Zhang mumps->id.isol_loc = isol_loc_save; 108271aed81dSHong Zhang 108371aed81dSHong Zhang ierr = PetscFree2(sol_loc,isol_loc);CHKERRQ(ierr); 1084801fbe65SHong Zhang ierr = PetscFree(idxx);CHKERRQ(ierr); 1085beae5ec0SHong Zhang ierr = VecDestroy(&msol_loc);CHKERRQ(ierr); 108674f0fcc7SHong Zhang ierr = VecDestroy(&v_mpi);CHKERRQ(ierr); 10872b691707SHong Zhang if (Bt) { 10882b691707SHong Zhang if (!mumps->myid) { 1089d56c302dSHong Zhang b = (Mat_MPIAIJ*)Bt->data; 10902b691707SHong Zhang ierr = MatSeqAIJRestoreArray(b->A,&aa);CHKERRQ(ierr); 1091be818407SHong Zhang ierr = MatRestoreRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1092c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 10932b691707SHong Zhang } 10942b691707SHong Zhang } else { 1095334c5f61SHong Zhang ierr = VecDestroy(&b_seq);CHKERRQ(ierr); 1096334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_rhs);CHKERRQ(ierr); 10972b691707SHong Zhang } 1098334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_sol);CHKERRQ(ierr); 10999880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*nrhs*mumps->id.RINFO(3));CHKERRQ(ierr); 1100e0b74bf9SHong Zhang PetscFunctionReturn(0); 1101e0b74bf9SHong Zhang } 1102e0b74bf9SHong Zhang 1103eb3ef3b2SHong Zhang PetscErrorCode MatMatTransposeSolve_MUMPS(Mat A,Mat Bt,Mat X) 1104eb3ef3b2SHong Zhang { 1105eb3ef3b2SHong Zhang PetscErrorCode ierr; 1106eb3ef3b2SHong Zhang PetscBool flg; 1107eb3ef3b2SHong Zhang Mat B; 1108eb3ef3b2SHong Zhang 1109eb3ef3b2SHong Zhang PetscFunctionBegin; 1110eb3ef3b2SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)Bt,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 1111eb3ef3b2SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)Bt),PETSC_ERR_ARG_WRONG,"Matrix Bt must be MATAIJ matrix"); 1112eb3ef3b2SHong Zhang 1113eb3ef3b2SHong Zhang /* Create B=Bt^T that uses Bt's data structure */ 1114eb3ef3b2SHong Zhang ierr = MatCreateTranspose(Bt,&B);CHKERRQ(ierr); 1115eb3ef3b2SHong Zhang 11160e6b8875SHong Zhang ierr = MatMatSolve_MUMPS(A,B,X);CHKERRQ(ierr); 1117eb3ef3b2SHong Zhang ierr = MatDestroy(&B);CHKERRQ(ierr); 1118eb3ef3b2SHong Zhang PetscFunctionReturn(0); 1119eb3ef3b2SHong Zhang } 1120eb3ef3b2SHong Zhang 1121ace3df97SHong Zhang #if !defined(PETSC_USE_COMPLEX) 1122a58c3f20SHong Zhang /* 1123a58c3f20SHong Zhang input: 1124a58c3f20SHong Zhang F: numeric factor 1125a58c3f20SHong Zhang output: 1126a58c3f20SHong Zhang nneg: total number of negative pivots 112719d49a3bSHong Zhang nzero: total number of zero pivots 112819d49a3bSHong Zhang npos: (global dimension of F) - nneg - nzero 1129a58c3f20SHong Zhang */ 1130dfbe8321SBarry Smith PetscErrorCode MatGetInertia_SBAIJMUMPS(Mat F,int *nneg,int *nzero,int *npos) 1131a58c3f20SHong Zhang { 1132e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1133dfbe8321SBarry Smith PetscErrorCode ierr; 1134c1490034SHong Zhang PetscMPIInt size; 1135a58c3f20SHong Zhang 1136a58c3f20SHong Zhang PetscFunctionBegin; 1137ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)F),&size);CHKERRQ(ierr); 1138bcb30aebSHong Zhang /* MUMPS 4.3.1 calls ScaLAPACK when ICNTL(13)=0 (default), which does not offer the possibility to compute the inertia of a dense matrix. Set ICNTL(13)=1 to skip ScaLAPACK */ 1139a5e57a09SHong Zhang if (size > 1 && mumps->id.ICNTL(13) != 1) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"ICNTL(13)=%d. -mat_mumps_icntl_13 must be set as 1 for correct global matrix inertia\n",mumps->id.INFOG(13)); 1140ed85ac9fSHong Zhang 1141710ac8efSHong Zhang if (nneg) *nneg = mumps->id.INFOG(12); 1142ed85ac9fSHong Zhang if (nzero || npos) { 1143ed85ac9fSHong Zhang if (mumps->id.ICNTL(24) != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"-mat_mumps_icntl_24 must be set as 1 for null pivot row detection"); 1144710ac8efSHong Zhang if (nzero) *nzero = mumps->id.INFOG(28); 1145710ac8efSHong Zhang if (npos) *npos = F->rmap->N - (mumps->id.INFOG(12) + mumps->id.INFOG(28)); 1146a58c3f20SHong Zhang } 1147a58c3f20SHong Zhang PetscFunctionReturn(0); 1148a58c3f20SHong Zhang } 114919d49a3bSHong Zhang #endif 1150a58c3f20SHong Zhang 11513ab56b82SJunchao Zhang PetscErrorCode MatMumpsGatherNonzerosOnMaster(MatReuse reuse,Mat_MUMPS *mumps) 11523ab56b82SJunchao Zhang { 11533ab56b82SJunchao Zhang PetscErrorCode ierr; 11546ac9f4daSSatish Balay PetscInt i,nz=0,*irn,*jcn=0; 11556ac9f4daSSatish Balay PetscScalar *val=0; 11563ab56b82SJunchao Zhang PetscMPIInt mpinz,*recvcount=NULL,*displs=NULL; 11573ab56b82SJunchao Zhang 11583ab56b82SJunchao Zhang PetscFunctionBegin; 11593ab56b82SJunchao Zhang if (mumps->omp_comm_size > 1) { 11603ab56b82SJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { 11613ab56b82SJunchao Zhang /* master first gathers counts of nonzeros to receive */ 11623ab56b82SJunchao Zhang if (mumps->is_omp_master) { ierr = PetscMalloc2(mumps->omp_comm_size,&recvcount,mumps->omp_comm_size,&displs);CHKERRQ(ierr); } 11633ab56b82SJunchao Zhang ierr = PetscMPIIntCast(mumps->nz,&mpinz);CHKERRQ(ierr); 11643ab56b82SJunchao Zhang ierr = MPI_Gather(&mpinz,1,MPI_INT,recvcount,1,MPI_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11653ab56b82SJunchao Zhang 11663ab56b82SJunchao Zhang /* master allocates memory to receive nonzeros */ 11673ab56b82SJunchao Zhang if (mumps->is_omp_master) { 11683ab56b82SJunchao Zhang displs[0] = 0; 11693ab56b82SJunchao Zhang for (i=1; i<mumps->omp_comm_size; i++) displs[i] = displs[i-1] + recvcount[i-1]; 11703ab56b82SJunchao Zhang nz = displs[mumps->omp_comm_size-1] + recvcount[mumps->omp_comm_size-1]; 11713ab56b82SJunchao Zhang ierr = PetscMalloc(2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar),&irn);CHKERRQ(ierr); 11723ab56b82SJunchao Zhang jcn = irn + nz; 11733ab56b82SJunchao Zhang val = (PetscScalar*)(jcn + nz); 11743ab56b82SJunchao Zhang } 11753ab56b82SJunchao Zhang 11763ab56b82SJunchao Zhang /* save the gatherv plan */ 11773ab56b82SJunchao Zhang mumps->mpinz = mpinz; /* used as send count */ 11783ab56b82SJunchao Zhang mumps->recvcount = recvcount; 11793ab56b82SJunchao Zhang mumps->displs = displs; 11803ab56b82SJunchao Zhang 11813ab56b82SJunchao Zhang /* master gathers nonzeros */ 11823ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->irn,mpinz,MPIU_INT,irn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11833ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->jcn,mpinz,MPIU_INT,jcn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11843ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->val,mpinz,MPIU_SCALAR,val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11853ab56b82SJunchao Zhang 11863ab56b82SJunchao Zhang /* master frees its row/col/val and replaces them with bigger arrays */ 11873ab56b82SJunchao Zhang if (mumps->is_omp_master) { 11883ab56b82SJunchao Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); /* irn/jcn/val are allocated together so free only irn */ 11893ab56b82SJunchao Zhang mumps->nz = nz; /* it is a sum of mpinz over omp_comm */ 11903ab56b82SJunchao Zhang mumps->irn = irn; 11913ab56b82SJunchao Zhang mumps->jcn = jcn; 11923ab56b82SJunchao Zhang mumps->val = val; 11933ab56b82SJunchao Zhang } 11943ab56b82SJunchao Zhang } else { 11953ab56b82SJunchao Zhang ierr = MPI_Gatherv((mumps->is_omp_master?MPI_IN_PLACE:mumps->val),mumps->mpinz,MPIU_SCALAR,mumps->val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11963ab56b82SJunchao Zhang } 11973ab56b82SJunchao Zhang } 11983ab56b82SJunchao Zhang PetscFunctionReturn(0); 11993ab56b82SJunchao Zhang } 12003ab56b82SJunchao Zhang 12010481f469SBarry Smith PetscErrorCode MatFactorNumeric_MUMPS(Mat F,Mat A,const MatFactorInfo *info) 1202af281ebdSHong Zhang { 1203e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)(F)->data; 12046849ba73SBarry Smith PetscErrorCode ierr; 1205ace3abfcSBarry Smith PetscBool isMPIAIJ; 1206397b6df1SKris Buschelman 1207397b6df1SKris Buschelman PetscFunctionBegin; 12086baea169SHong Zhang if (mumps->id.INFOG(1) < 0) { 12092aca8efcSHong Zhang if (mumps->id.INFOG(1) == -6) { 12102aca8efcSHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called with singular matrix structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 12116baea169SHong Zhang } 12126baea169SHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called after analysis phase fails, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 12132aca8efcSHong Zhang PetscFunctionReturn(0); 12142aca8efcSHong Zhang } 12156baea169SHong Zhang 1216a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_REUSE_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 12173ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_REUSE_MATRIX,mumps);CHKERRQ(ierr); 1218397b6df1SKris Buschelman 1219397b6df1SKris Buschelman /* numerical factorization phase */ 1220329ec9b3SHong Zhang /*-------------------------------*/ 1221a5e57a09SHong Zhang mumps->id.job = JOB_FACTNUMERIC; 12224e34a73bSHong Zhang if (!mumps->id.ICNTL(18)) { /* A is centralized */ 1223a5e57a09SHong Zhang if (!mumps->myid) { 1224940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 1225397b6df1SKris Buschelman } 1226397b6df1SKris Buschelman } else { 1227940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 1228397b6df1SKris Buschelman } 12293ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1230a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) { 1231c0d63f2fSHong Zhang if (A->erroriffailure) { 1232c0d63f2fSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 1233151787a6SHong Zhang } else { 1234c0d63f2fSHong Zhang if (mumps->id.INFOG(1) == -10) { /* numerically singular matrix */ 12352aca8efcSHong Zhang ierr = PetscInfo2(F,"matrix is numerically singular, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1236603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 1237c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -13) { 1238c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, cannot allocate required memory %d megabytes\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1239603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 1240c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -8 || mumps->id.INFOG(1) == -9 || (-16 < mumps->id.INFOG(1) && mumps->id.INFOG(1) < -10) ) { 1241c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d, problem with workarray \n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1242603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 12432aca8efcSHong Zhang } else { 1244c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1245603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 1246151787a6SHong Zhang } 12472aca8efcSHong Zhang } 1248397b6df1SKris Buschelman } 1249a5e57a09SHong Zhang if (!mumps->myid && mumps->id.ICNTL(16) > 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB," mumps->id.ICNTL(16):=%d\n",mumps->id.INFOG(16)); 1250397b6df1SKris Buschelman 1251b3cb21ddSStefano Zampini F->assembled = PETSC_TRUE; 1252a5e57a09SHong Zhang mumps->matstruc = SAME_NONZERO_PATTERN; 1253b3cb21ddSStefano Zampini if (F->schur) { /* reset Schur status to unfactored */ 1254b3cb21ddSStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 1255b3cb21ddSStefano Zampini mumps->id.ICNTL(19) = 2; 1256b3cb21ddSStefano Zampini ierr = MatTranspose(F->schur,MAT_INPLACE_MATRIX,&F->schur);CHKERRQ(ierr); 1257b3cb21ddSStefano Zampini } 1258b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,NULL,MAT_FACTOR_SCHUR_UNFACTORED);CHKERRQ(ierr); 1259b3cb21ddSStefano Zampini } 126067877ebaSShri Abhyankar 1261066565c5SStefano Zampini /* just to be sure that ICNTL(19) value returned by a call from MatMumpsGetIcntl is always consistent */ 1262066565c5SStefano Zampini if (!mumps->sym && mumps->id.ICNTL(19) && mumps->id.ICNTL(19) != 1) mumps->id.ICNTL(19) = 3; 1263066565c5SStefano Zampini 12643ab56b82SJunchao Zhang if (!mumps->is_omp_master) mumps->id.INFO(23) = 0; 12652d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 126667877ebaSShri Abhyankar PetscInt lsol_loc; 126767877ebaSShri Abhyankar PetscScalar *sol_loc; 12682205254eSKarl Rupp 1269c2093ab7SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&isMPIAIJ);CHKERRQ(ierr); 1270c2093ab7SHong Zhang 1271c2093ab7SHong Zhang /* distributed solution; Create x_seq=sol_loc for repeated use */ 1272c2093ab7SHong Zhang if (mumps->x_seq) { 1273c2093ab7SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 1274c2093ab7SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 1275c2093ab7SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 1276c2093ab7SHong Zhang } 1277a5e57a09SHong Zhang lsol_loc = mumps->id.INFO(23); /* length of sol_loc */ 1278dcca6d9dSJed Brown ierr = PetscMalloc2(lsol_loc,&sol_loc,lsol_loc,&mumps->id.isol_loc);CHKERRQ(ierr); 1279a5e57a09SHong Zhang mumps->id.lsol_loc = lsol_loc; 1280940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 1281a5e57a09SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,lsol_loc,sol_loc,&mumps->x_seq);CHKERRQ(ierr); 128267877ebaSShri Abhyankar } 12839880c9b4SStefano Zampini ierr = PetscLogFlops(mumps->id.RINFO(2));CHKERRQ(ierr); 1284397b6df1SKris Buschelman PetscFunctionReturn(0); 1285397b6df1SKris Buschelman } 1286397b6df1SKris Buschelman 12879a2535b5SHong Zhang /* Sets MUMPS options from the options database */ 12889a2535b5SHong Zhang PetscErrorCode PetscSetMUMPSFromOptions(Mat F, Mat A) 1289dcd589f8SShri Abhyankar { 1290e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1291dcd589f8SShri Abhyankar PetscErrorCode ierr; 1292*a0e18203SThibaut Appel PetscInt icntl,info[80],i,ninfo=80; 1293ace3abfcSBarry Smith PetscBool flg; 1294dcd589f8SShri Abhyankar 1295dcd589f8SShri Abhyankar PetscFunctionBegin; 1296ce94432eSBarry Smith ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MUMPS Options","Mat");CHKERRQ(ierr); 12979a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_1","ICNTL(1): output stream for error messages","None",mumps->id.ICNTL(1),&icntl,&flg);CHKERRQ(ierr); 12989a2535b5SHong Zhang if (flg) mumps->id.ICNTL(1) = icntl; 12999a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_2","ICNTL(2): output stream for diagnostic printing, statistics, and warning","None",mumps->id.ICNTL(2),&icntl,&flg);CHKERRQ(ierr); 13009a2535b5SHong Zhang if (flg) mumps->id.ICNTL(2) = icntl; 13019a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_3","ICNTL(3): output stream for global information, collected on the host","None",mumps->id.ICNTL(3),&icntl,&flg);CHKERRQ(ierr); 13029a2535b5SHong Zhang if (flg) mumps->id.ICNTL(3) = icntl; 1303dcd589f8SShri Abhyankar 13049a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_4","ICNTL(4): level of printing (0 to 4)","None",mumps->id.ICNTL(4),&icntl,&flg);CHKERRQ(ierr); 13059a2535b5SHong Zhang if (flg) mumps->id.ICNTL(4) = icntl; 13069a2535b5SHong Zhang if (mumps->id.ICNTL(4) || PetscLogPrintInfo) mumps->id.ICNTL(3) = 6; /* resume MUMPS default id.ICNTL(3) = 6 */ 13079a2535b5SHong Zhang 1308d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_6","ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7)","None",mumps->id.ICNTL(6),&icntl,&flg);CHKERRQ(ierr); 13099a2535b5SHong Zhang if (flg) mumps->id.ICNTL(6) = icntl; 13109a2535b5SHong Zhang 1311d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_7","ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis","None",mumps->id.ICNTL(7),&icntl,&flg);CHKERRQ(ierr); 1312dcd589f8SShri Abhyankar if (flg) { 13132d4298aeSJunchao Zhang if (icntl== 1 && mumps->petsc_size > 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"pivot order be set by the user in PERM_IN -- not supported by the PETSc/MUMPS interface\n"); 13142205254eSKarl Rupp else mumps->id.ICNTL(7) = icntl; 1315dcd589f8SShri Abhyankar } 1316e0b74bf9SHong Zhang 13170298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_8","ICNTL(8): scaling strategy (-2 to 8 or 77)","None",mumps->id.ICNTL(8),&mumps->id.ICNTL(8),NULL);CHKERRQ(ierr); 1318d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_9","ICNTL(9): computes the solution using A or A^T","None",mumps->id.ICNTL(9),&mumps->id.ICNTL(9),NULL);CHKERRQ(ierr); handled by MatSolveTranspose_MUMPS() */ 13190298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_10","ICNTL(10): max num of refinements","None",mumps->id.ICNTL(10),&mumps->id.ICNTL(10),NULL);CHKERRQ(ierr); 1320d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_11","ICNTL(11): statistics related to an error analysis (via -ksp_view)","None",mumps->id.ICNTL(11),&mumps->id.ICNTL(11),NULL);CHKERRQ(ierr); 1321d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_12","ICNTL(12): an ordering strategy for symmetric matrices (0 to 3)","None",mumps->id.ICNTL(12),&mumps->id.ICNTL(12),NULL);CHKERRQ(ierr); 1322d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_13","ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting","None",mumps->id.ICNTL(13),&mumps->id.ICNTL(13),NULL);CHKERRQ(ierr); 1323d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_14","ICNTL(14): percentage increase in the estimated working space","None",mumps->id.ICNTL(14),&mumps->id.ICNTL(14),NULL);CHKERRQ(ierr); 1324d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_19","ICNTL(19): computes the Schur complement","None",mumps->id.ICNTL(19),&mumps->id.ICNTL(19),NULL);CHKERRQ(ierr); 132559ac8732SStefano Zampini if (mumps->id.ICNTL(19) <= 0 || mumps->id.ICNTL(19) > 3) { /* reset any schur data (if any) */ 1326b3cb21ddSStefano Zampini ierr = MatDestroy(&F->schur);CHKERRQ(ierr); 132759ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 132859ac8732SStefano Zampini } 13294e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_20","ICNTL(20): the format (dense or sparse) of the right-hand sides","None",mumps->id.ICNTL(20),&mumps->id.ICNTL(20),NULL);CHKERRQ(ierr); -- sparse rhs is not supported in PETSc API */ 1330d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_21","ICNTL(21): the distribution (centralized or distributed) of the solution vectors","None",mumps->id.ICNTL(21),&mumps->id.ICNTL(21),NULL);CHKERRQ(ierr); we only use distributed solution vector */ 13319a2535b5SHong Zhang 1332d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_22","ICNTL(22): in-core/out-of-core factorization and solve (0 or 1)","None",mumps->id.ICNTL(22),&mumps->id.ICNTL(22),NULL);CHKERRQ(ierr); 13330298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_23","ICNTL(23): max size of the working memory (MB) that can allocate per processor","None",mumps->id.ICNTL(23),&mumps->id.ICNTL(23),NULL);CHKERRQ(ierr); 13340298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_24","ICNTL(24): detection of null pivot rows (0 or 1)","None",mumps->id.ICNTL(24),&mumps->id.ICNTL(24),NULL);CHKERRQ(ierr); 13359a2535b5SHong Zhang if (mumps->id.ICNTL(24)) { 13369a2535b5SHong Zhang mumps->id.ICNTL(13) = 1; /* turn-off ScaLAPACK to help with the correct detection of null pivots */ 1337d7ebd59bSHong Zhang } 1338d7ebd59bSHong Zhang 1339b4ed93dbSHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_25","ICNTL(25): computes a solution of a deficient matrix and a null space basis","None",mumps->id.ICNTL(25),&mumps->id.ICNTL(25),NULL);CHKERRQ(ierr); 1340d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_26","ICNTL(26): drives the solution phase if a Schur complement matrix","None",mumps->id.ICNTL(26),&mumps->id.ICNTL(26),NULL);CHKERRQ(ierr); 13412cd7d884SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_27","ICNTL(27): the blocking size for multiple right-hand sides","None",mumps->id.ICNTL(27),&mumps->id.ICNTL(27),NULL);CHKERRQ(ierr); 13420298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_28","ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering","None",mumps->id.ICNTL(28),&mumps->id.ICNTL(28),NULL);CHKERRQ(ierr); 1343d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_29","ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis","None",mumps->id.ICNTL(29),&mumps->id.ICNTL(29),NULL);CHKERRQ(ierr); 134489a9c03aSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_30","ICNTL(30): compute user-specified set of entries in inv(A)","None",mumps->id.ICNTL(30),&mumps->id.ICNTL(30),NULL);CHKERRQ(ierr); */ /* call MatMumpsGetInverse() directly */ 1345d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_31","ICNTL(31): indicates which factors may be discarded during factorization","None",mumps->id.ICNTL(31),&mumps->id.ICNTL(31),NULL);CHKERRQ(ierr); 13464e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_32","ICNTL(32): performs the forward elemination of the right-hand sides during factorization","None",mumps->id.ICNTL(32),&mumps->id.ICNTL(32),NULL);CHKERRQ(ierr); -- not supported by PETSc API */ 13470298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_33","ICNTL(33): compute determinant","None",mumps->id.ICNTL(33),&mumps->id.ICNTL(33),NULL);CHKERRQ(ierr); 1348*a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_35","ICNTL(35): activates Block Low Rank (BLR) based factorization","None",mumps->id.ICNTL(35),&mumps->id.ICNTL(35),NULL);CHKERRQ(ierr); 1349*a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_36","ICNTL(36): choice of BLR factorization variant","None",mumps->id.ICNTL(36),&mumps->id.ICNTL(36),NULL);CHKERRQ(ierr); 1350*a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_38","ICNTL(38): estimated compression rate of LU factors with BLR","None",mumps->id.ICNTL(38),&mumps->id.ICNTL(38),NULL);CHKERRQ(ierr); 1351dcd589f8SShri Abhyankar 13520298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr); 13530298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr); 13540298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr); 13550298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr); 13560298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_5","CNTL(5): fixation for null pivots","None",mumps->id.CNTL(5),&mumps->id.CNTL(5),NULL);CHKERRQ(ierr); 1357b4ed93dbSHong Zhang ierr = PetscOptionsReal("-mat_mumps_cntl_7","CNTL(7): dropping parameter used during BLR","None",mumps->id.CNTL(7),&mumps->id.CNTL(7),NULL);CHKERRQ(ierr); 1358e5bb22a1SHong Zhang 13592a808120SBarry Smith ierr = PetscOptionsString("-mat_mumps_ooc_tmpdir", "out of core directory", "None", mumps->id.ooc_tmpdir, mumps->id.ooc_tmpdir, 256, NULL);CHKERRQ(ierr); 1360b34f08ffSHong Zhang 136116d797efSHong Zhang ierr = PetscOptionsIntArray("-mat_mumps_view_info","request INFO local to each processor","",info,&ninfo,NULL);CHKERRQ(ierr); 1362b34f08ffSHong Zhang if (ninfo) { 1363*a0e18203SThibaut Appel if (ninfo > 80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"number of INFO %d must <= 80\n",ninfo); 1364b34f08ffSHong Zhang ierr = PetscMalloc1(ninfo,&mumps->info);CHKERRQ(ierr); 1365b34f08ffSHong Zhang mumps->ninfo = ninfo; 1366b34f08ffSHong Zhang for (i=0; i<ninfo; i++) { 1367*a0e18203SThibaut Appel if (info[i] < 0 || info[i]>80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"index of INFO %d must between 1 and 80\n",ninfo); 13682a808120SBarry Smith else mumps->info[i] = info[i]; 1369b34f08ffSHong Zhang } 1370b34f08ffSHong Zhang } 1371b34f08ffSHong Zhang 13722a808120SBarry Smith ierr = PetscOptionsEnd();CHKERRQ(ierr); 1373dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1374dcd589f8SShri Abhyankar } 1375dcd589f8SShri Abhyankar 1376f697e70eSHong Zhang PetscErrorCode PetscInitializeMUMPS(Mat A,Mat_MUMPS *mumps) 1377dcd589f8SShri Abhyankar { 1378dcd589f8SShri Abhyankar PetscErrorCode ierr; 13797c405c4aSJunchao Zhang PetscInt nthreads=0; 1380dcd589f8SShri Abhyankar 1381dcd589f8SShri Abhyankar PetscFunctionBegin; 13823ab56b82SJunchao Zhang mumps->petsc_comm = PetscObjectComm((PetscObject)A); 13833ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->petsc_comm,&mumps->petsc_size);CHKERRQ(ierr); 13843ab56b82SJunchao Zhang ierr = MPI_Comm_rank(mumps->petsc_comm,&mumps->myid);CHKERRQ(ierr); /* so that code like "if (!myid)" still works even if mumps_comm is different */ 13853ab56b82SJunchao Zhang 13867c405c4aSJunchao Zhang ierr = PetscOptionsHasName(NULL,NULL,"-mat_mumps_use_omp_threads",&mumps->use_petsc_omp_support);CHKERRQ(ierr); 13877c405c4aSJunchao Zhang if (mumps->use_petsc_omp_support) nthreads = -1; /* -1 will let PetscOmpCtrlCreate() guess a proper value when user did not supply one */ 13887c405c4aSJunchao Zhang ierr = PetscOptionsGetInt(NULL,NULL,"-mat_mumps_use_omp_threads",&nthreads,NULL);CHKERRQ(ierr); 13893ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { 13903ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 13913ab56b82SJunchao Zhang ierr = PetscOmpCtrlCreate(mumps->petsc_comm,nthreads,&mumps->omp_ctrl);CHKERRQ(ierr); 13923ab56b82SJunchao Zhang ierr = PetscOmpCtrlGetOmpComms(mumps->omp_ctrl,&mumps->omp_comm,&mumps->mumps_comm,&mumps->is_omp_master);CHKERRQ(ierr); 13933ab56b82SJunchao Zhang #else 1394217d3b1eSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP_SYS,"the system does not have PETSc OpenMP support but you added the -mat_mumps_use_omp_threads option. Configure PETSc with --with-openmp --download-hwloc (or --with-hwloc) to enable it, see more in MATSOLVERMUMPS manual\n"); 13953ab56b82SJunchao Zhang #endif 13963ab56b82SJunchao Zhang } else { 13973ab56b82SJunchao Zhang mumps->omp_comm = PETSC_COMM_SELF; 13983ab56b82SJunchao Zhang mumps->mumps_comm = mumps->petsc_comm; 13993ab56b82SJunchao Zhang mumps->is_omp_master = PETSC_TRUE; 14003ab56b82SJunchao Zhang } 14013ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->omp_comm,&mumps->omp_comm_size);CHKERRQ(ierr); 14022205254eSKarl Rupp 14032d4298aeSJunchao Zhang mumps->id.comm_fortran = MPI_Comm_c2f(mumps->mumps_comm); 1404f697e70eSHong Zhang mumps->id.job = JOB_INIT; 1405f697e70eSHong Zhang mumps->id.par = 1; /* host participates factorizaton and solve */ 1406f697e70eSHong Zhang mumps->id.sym = mumps->sym; 14073ab56b82SJunchao Zhang 14083ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 14093ab56b82SJunchao Zhang 14103ab56b82SJunchao Zhang /* copy MUMPS default control values from master to slaves. Although slaves do not call MUMPS, they may access these values in code. 14113ab56b82SJunchao Zhang For example, ICNTL(9) is initialized to 1 by MUMPS and slaves check ICNTL(9) in MatSolve_MUMPS. 14123ab56b82SJunchao Zhang */ 1413*a0e18203SThibaut Appel ierr = MPI_Bcast(mumps->id.icntl,60,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 Manual Section 9 */ 14143ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.cntl, 15,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 1415f697e70eSHong Zhang 14160298fd71SBarry Smith mumps->scat_rhs = NULL; 14170298fd71SBarry Smith mumps->scat_sol = NULL; 14189a2535b5SHong Zhang 141970544d5fSHong Zhang /* set PETSc-MUMPS default options - override MUMPS default */ 14209a2535b5SHong Zhang mumps->id.ICNTL(3) = 0; 14219a2535b5SHong Zhang mumps->id.ICNTL(4) = 0; 14222d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 14239a2535b5SHong Zhang mumps->id.ICNTL(18) = 0; /* centralized assembled matrix input */ 14249a2535b5SHong Zhang } else { 14259a2535b5SHong Zhang mumps->id.ICNTL(18) = 3; /* distributed assembled matrix input */ 14264e34a73bSHong Zhang mumps->id.ICNTL(20) = 0; /* rhs is in dense format */ 142770544d5fSHong Zhang mumps->id.ICNTL(21) = 1; /* distributed solution */ 14289a2535b5SHong Zhang } 14296444a565SStefano Zampini 14306444a565SStefano Zampini /* schur */ 14316444a565SStefano Zampini mumps->id.size_schur = 0; 14326444a565SStefano Zampini mumps->id.listvar_schur = NULL; 14336444a565SStefano Zampini mumps->id.schur = NULL; 1434b5fa320bSStefano Zampini mumps->sizeredrhs = 0; 143559ac8732SStefano Zampini mumps->schur_sol = NULL; 143659ac8732SStefano Zampini mumps->schur_sizesol = 0; 1437dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1438dcd589f8SShri Abhyankar } 1439dcd589f8SShri Abhyankar 14409a625307SHong Zhang PetscErrorCode MatFactorSymbolic_MUMPS_ReportIfError(Mat F,Mat A,const MatFactorInfo *info,Mat_MUMPS *mumps) 14415cd7cf9dSHong Zhang { 14425cd7cf9dSHong Zhang PetscErrorCode ierr; 14435cd7cf9dSHong Zhang 14445cd7cf9dSHong Zhang PetscFunctionBegin; 1445*a0e18203SThibaut Appel ierr = MPI_Bcast(mumps->id.infog, 80,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 manual p82 */ 14463ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.rinfog,20,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 14475cd7cf9dSHong Zhang if (mumps->id.INFOG(1) < 0) { 14485cd7cf9dSHong Zhang if (A->erroriffailure) { 14495cd7cf9dSHong Zhang SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in analysis phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 14505cd7cf9dSHong Zhang } else { 14515cd7cf9dSHong Zhang if (mumps->id.INFOG(1) == -6) { 14525cd7cf9dSHong Zhang ierr = PetscInfo2(F,"matrix is singular in structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1453603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_STRUCT_ZEROPIVOT; 14545cd7cf9dSHong Zhang } else if (mumps->id.INFOG(1) == -5 || mumps->id.INFOG(1) == -7) { 14555cd7cf9dSHong Zhang ierr = PetscInfo2(F,"problem of workspace, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1456603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 14575cd7cf9dSHong Zhang } else { 14585cd7cf9dSHong Zhang ierr = PetscInfo2(F,"Error reported by MUMPS in analysis phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1459603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 14605cd7cf9dSHong Zhang } 14615cd7cf9dSHong Zhang } 14625cd7cf9dSHong Zhang } 14635cd7cf9dSHong Zhang PetscFunctionReturn(0); 14645cd7cf9dSHong Zhang } 14655cd7cf9dSHong Zhang 1466a5e57a09SHong Zhang /* Note Petsc r(=c) permutation is used when mumps->id.ICNTL(7)==1 with centralized assembled matrix input; otherwise r and c are ignored */ 14670481f469SBarry Smith PetscErrorCode MatLUFactorSymbolic_AIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1468b24902e0SBarry Smith { 1469e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1470dcd589f8SShri Abhyankar PetscErrorCode ierr; 147167877ebaSShri Abhyankar Vec b; 147267877ebaSShri Abhyankar IS is_iden; 147367877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1474397b6df1SKris Buschelman 1475397b6df1SKris Buschelman PetscFunctionBegin; 1476a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1477dcd589f8SShri Abhyankar 14789a2535b5SHong Zhang /* Set MUMPS options from the options database */ 14799a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1480dcd589f8SShri Abhyankar 1481a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 14823ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1483dcd589f8SShri Abhyankar 148467877ebaSShri Abhyankar /* analysis phase */ 148567877ebaSShri Abhyankar /*----------------*/ 1486a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1487a5e57a09SHong Zhang mumps->id.n = M; 1488a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 148967877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1490a5e57a09SHong Zhang if (!mumps->myid) { 1491a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1492a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1493940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 149467877ebaSShri Abhyankar } 1495a5e57a09SHong Zhang if (mumps->id.ICNTL(7) == 1) { /* use user-provide matrix ordering - assuming r = c ordering */ 14965248a706SHong Zhang /* 14975248a706SHong Zhang PetscBool flag; 14985248a706SHong Zhang ierr = ISEqual(r,c,&flag);CHKERRQ(ierr); 14995248a706SHong Zhang if (!flag) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"row_perm != col_perm"); 15005248a706SHong Zhang ierr = ISView(r,PETSC_VIEWER_STDOUT_SELF); 15015248a706SHong Zhang */ 1502a5e57a09SHong Zhang if (!mumps->myid) { 1503e0b74bf9SHong Zhang const PetscInt *idx; 1504e0b74bf9SHong Zhang PetscInt i,*perm_in; 15052205254eSKarl Rupp 1506785e854fSJed Brown ierr = PetscMalloc1(M,&perm_in);CHKERRQ(ierr); 1507e0b74bf9SHong Zhang ierr = ISGetIndices(r,&idx);CHKERRQ(ierr); 15082205254eSKarl Rupp 1509a5e57a09SHong Zhang mumps->id.perm_in = perm_in; 1510e0b74bf9SHong Zhang for (i=0; i<M; i++) perm_in[i] = idx[i]+1; /* perm_in[]: start from 1, not 0! */ 1511e0b74bf9SHong Zhang ierr = ISRestoreIndices(r,&idx);CHKERRQ(ierr); 1512e0b74bf9SHong Zhang } 1513e0b74bf9SHong Zhang } 151467877ebaSShri Abhyankar } 151567877ebaSShri Abhyankar break; 151667877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1517a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1518a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1519a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1520940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 152167877ebaSShri Abhyankar } 152267877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 1523a5e57a09SHong Zhang if (!mumps->myid) { 15242cd7d884SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,A->rmap->N,&mumps->b_seq);CHKERRQ(ierr); 15252cd7d884SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,A->rmap->N,0,1,&is_iden);CHKERRQ(ierr); 152667877ebaSShri Abhyankar } else { 1527a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&mumps->b_seq);CHKERRQ(ierr); 152867877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_iden);CHKERRQ(ierr); 152967877ebaSShri Abhyankar } 15302a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 15319448b7f1SJunchao Zhang ierr = VecScatterCreate(b,is_iden,mumps->b_seq,is_iden,&mumps->scat_rhs);CHKERRQ(ierr); 15326bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 15336bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 153467877ebaSShri Abhyankar break; 153567877ebaSShri Abhyankar } 15363ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 15375cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 153867877ebaSShri Abhyankar 1539719d5645SBarry Smith F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1540dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 154151d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 15424e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 1543eb3ef3b2SHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 1544b24902e0SBarry Smith PetscFunctionReturn(0); 1545b24902e0SBarry Smith } 1546b24902e0SBarry Smith 1547450b117fSShri Abhyankar /* Note the Petsc r and c permutations are ignored */ 1548450b117fSShri Abhyankar PetscErrorCode MatLUFactorSymbolic_BAIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1549450b117fSShri Abhyankar { 1550e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1551dcd589f8SShri Abhyankar PetscErrorCode ierr; 155267877ebaSShri Abhyankar Vec b; 155367877ebaSShri Abhyankar IS is_iden; 155467877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1555450b117fSShri Abhyankar 1556450b117fSShri Abhyankar PetscFunctionBegin; 1557a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1558dcd589f8SShri Abhyankar 15599a2535b5SHong Zhang /* Set MUMPS options from the options database */ 15609a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1561dcd589f8SShri Abhyankar 1562a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 15633ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 156467877ebaSShri Abhyankar 156567877ebaSShri Abhyankar /* analysis phase */ 156667877ebaSShri Abhyankar /*----------------*/ 1567a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1568a5e57a09SHong Zhang mumps->id.n = M; 1569a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 157067877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1571a5e57a09SHong Zhang if (!mumps->myid) { 1572a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1573a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1574940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 157567877ebaSShri Abhyankar } 157667877ebaSShri Abhyankar } 157767877ebaSShri Abhyankar break; 157867877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1579a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1580a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1581a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1582940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 158367877ebaSShri Abhyankar } 158467877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 1585a5e57a09SHong Zhang if (!mumps->myid) { 1586a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,A->cmap->N,&mumps->b_seq);CHKERRQ(ierr); 158767877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,A->cmap->N,0,1,&is_iden);CHKERRQ(ierr); 158867877ebaSShri Abhyankar } else { 1589a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&mumps->b_seq);CHKERRQ(ierr); 159067877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_iden);CHKERRQ(ierr); 159167877ebaSShri Abhyankar } 15922a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 15939448b7f1SJunchao Zhang ierr = VecScatterCreate(b,is_iden,mumps->b_seq,is_iden,&mumps->scat_rhs);CHKERRQ(ierr); 15946bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 15956bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 159667877ebaSShri Abhyankar break; 159767877ebaSShri Abhyankar } 15983ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 15995cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 160067877ebaSShri Abhyankar 1601450b117fSShri Abhyankar F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1602dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 160351d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 1604450b117fSShri Abhyankar PetscFunctionReturn(0); 1605450b117fSShri Abhyankar } 1606b24902e0SBarry Smith 1607141f4205SHong Zhang /* Note the Petsc r permutation and factor info are ignored */ 160867877ebaSShri Abhyankar PetscErrorCode MatCholeskyFactorSymbolic_MUMPS(Mat F,Mat A,IS r,const MatFactorInfo *info) 1609b24902e0SBarry Smith { 1610e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1611dcd589f8SShri Abhyankar PetscErrorCode ierr; 161267877ebaSShri Abhyankar Vec b; 161367877ebaSShri Abhyankar IS is_iden; 161467877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1615397b6df1SKris Buschelman 1616397b6df1SKris Buschelman PetscFunctionBegin; 1617a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1618dcd589f8SShri Abhyankar 16199a2535b5SHong Zhang /* Set MUMPS options from the options database */ 16209a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1621dcd589f8SShri Abhyankar 1622a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 16233ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1624dcd589f8SShri Abhyankar 162567877ebaSShri Abhyankar /* analysis phase */ 162667877ebaSShri Abhyankar /*----------------*/ 1627a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1628a5e57a09SHong Zhang mumps->id.n = M; 1629a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 163067877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1631a5e57a09SHong Zhang if (!mumps->myid) { 1632a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1633a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1634940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 163567877ebaSShri Abhyankar } 163667877ebaSShri Abhyankar } 163767877ebaSShri Abhyankar break; 163867877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1639a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1640a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1641a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1642940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 164367877ebaSShri Abhyankar } 164467877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 1645a5e57a09SHong Zhang if (!mumps->myid) { 1646a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,A->cmap->N,&mumps->b_seq);CHKERRQ(ierr); 164767877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,A->cmap->N,0,1,&is_iden);CHKERRQ(ierr); 164867877ebaSShri Abhyankar } else { 1649a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&mumps->b_seq);CHKERRQ(ierr); 165067877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_iden);CHKERRQ(ierr); 165167877ebaSShri Abhyankar } 16522a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 16539448b7f1SJunchao Zhang ierr = VecScatterCreate(b,is_iden,mumps->b_seq,is_iden,&mumps->scat_rhs);CHKERRQ(ierr); 16546bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 16556bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 165667877ebaSShri Abhyankar break; 165767877ebaSShri Abhyankar } 16583ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 16595cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 16605cd7cf9dSHong Zhang 16612792810eSHong Zhang F->ops->choleskyfactornumeric = MatFactorNumeric_MUMPS; 1662dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 166351d5961aSHong Zhang F->ops->solvetranspose = MatSolve_MUMPS; 16644e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 166523a5080aSHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 16664e34a73bSHong Zhang #if defined(PETSC_USE_COMPLEX) 16670298fd71SBarry Smith F->ops->getinertia = NULL; 16684e34a73bSHong Zhang #else 16694e34a73bSHong Zhang F->ops->getinertia = MatGetInertia_SBAIJMUMPS; 1670db4efbfdSBarry Smith #endif 1671b24902e0SBarry Smith PetscFunctionReturn(0); 1672b24902e0SBarry Smith } 1673b24902e0SBarry Smith 167464e6c443SBarry Smith PetscErrorCode MatView_MUMPS(Mat A,PetscViewer viewer) 167574ed9c26SBarry Smith { 1676f6c57405SHong Zhang PetscErrorCode ierr; 167764e6c443SBarry Smith PetscBool iascii; 167864e6c443SBarry Smith PetscViewerFormat format; 1679e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 1680f6c57405SHong Zhang 1681f6c57405SHong Zhang PetscFunctionBegin; 168264e6c443SBarry Smith /* check if matrix is mumps type */ 168364e6c443SBarry Smith if (A->ops->solve != MatSolve_MUMPS) PetscFunctionReturn(0); 168464e6c443SBarry Smith 1685251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 168664e6c443SBarry Smith if (iascii) { 168764e6c443SBarry Smith ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 168864e6c443SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO) { 168964e6c443SBarry Smith ierr = PetscViewerASCIIPrintf(viewer,"MUMPS run parameters:\n");CHKERRQ(ierr); 1690a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," SYM (matrix type): %d \n",mumps->id.sym);CHKERRQ(ierr); 1691a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," PAR (host participation): %d \n",mumps->id.par);CHKERRQ(ierr); 1692a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(1) (output for error): %d \n",mumps->id.ICNTL(1));CHKERRQ(ierr); 1693a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(2) (output of diagnostic msg): %d \n",mumps->id.ICNTL(2));CHKERRQ(ierr); 1694a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(3) (output for global info): %d \n",mumps->id.ICNTL(3));CHKERRQ(ierr); 1695a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(4) (level of printing): %d \n",mumps->id.ICNTL(4));CHKERRQ(ierr); 1696a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(5) (input mat struct): %d \n",mumps->id.ICNTL(5));CHKERRQ(ierr); 1697a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(6) (matrix prescaling): %d \n",mumps->id.ICNTL(6));CHKERRQ(ierr); 1698d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(7) (sequential matrix ordering):%d \n",mumps->id.ICNTL(7));CHKERRQ(ierr); 1699d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(8) (scaling strategy): %d \n",mumps->id.ICNTL(8));CHKERRQ(ierr); 1700a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(10) (max num of refinements): %d \n",mumps->id.ICNTL(10));CHKERRQ(ierr); 1701a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(11) (error analysis): %d \n",mumps->id.ICNTL(11));CHKERRQ(ierr); 1702a5e57a09SHong Zhang if (mumps->id.ICNTL(11)>0) { 1703a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(4) (inf norm of input mat): %g\n",mumps->id.RINFOG(4));CHKERRQ(ierr); 1704a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(5) (inf norm of solution): %g\n",mumps->id.RINFOG(5));CHKERRQ(ierr); 1705a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(6) (inf norm of residual): %g\n",mumps->id.RINFOG(6));CHKERRQ(ierr); 1706a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(7),RINFOG(8) (backward error est): %g, %g\n",mumps->id.RINFOG(7),mumps->id.RINFOG(8));CHKERRQ(ierr); 1707a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(9) (error estimate): %g \n",mumps->id.RINFOG(9));CHKERRQ(ierr); 1708a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(10),RINFOG(11)(condition numbers): %g, %g\n",mumps->id.RINFOG(10),mumps->id.RINFOG(11));CHKERRQ(ierr); 1709f6c57405SHong Zhang } 1710a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(12) (efficiency control): %d \n",mumps->id.ICNTL(12));CHKERRQ(ierr); 1711a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(13) (efficiency control): %d \n",mumps->id.ICNTL(13));CHKERRQ(ierr); 1712a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(14) (percentage of estimated workspace increase): %d \n",mumps->id.ICNTL(14));CHKERRQ(ierr); 1713f6c57405SHong Zhang /* ICNTL(15-17) not used */ 1714a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(18) (input mat struct): %d \n",mumps->id.ICNTL(18));CHKERRQ(ierr); 1715d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(19) (Schur complement info): %d \n",mumps->id.ICNTL(19));CHKERRQ(ierr); 1716a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(20) (rhs sparse pattern): %d \n",mumps->id.ICNTL(20));CHKERRQ(ierr); 1717ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," ICNTL(21) (solution struct): %d \n",mumps->id.ICNTL(21));CHKERRQ(ierr); 1718a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(22) (in-core/out-of-core facility): %d \n",mumps->id.ICNTL(22));CHKERRQ(ierr); 1719a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(23) (max size of memory can be allocated locally):%d \n",mumps->id.ICNTL(23));CHKERRQ(ierr); 1720c0165424SHong Zhang 1721a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(24) (detection of null pivot rows): %d \n",mumps->id.ICNTL(24));CHKERRQ(ierr); 1722a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(25) (computation of a null space basis): %d \n",mumps->id.ICNTL(25));CHKERRQ(ierr); 1723a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(26) (Schur options for rhs or solution): %d \n",mumps->id.ICNTL(26));CHKERRQ(ierr); 1724a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(27) (experimental parameter): %d \n",mumps->id.ICNTL(27));CHKERRQ(ierr); 1725a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(28) (use parallel or sequential ordering): %d \n",mumps->id.ICNTL(28));CHKERRQ(ierr); 1726a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(29) (parallel ordering): %d \n",mumps->id.ICNTL(29));CHKERRQ(ierr); 172742179a6aSHong Zhang 1728a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(30) (user-specified set of entries in inv(A)): %d \n",mumps->id.ICNTL(30));CHKERRQ(ierr); 1729a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(31) (factors is discarded in the solve phase): %d \n",mumps->id.ICNTL(31));CHKERRQ(ierr); 1730a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(33) (compute determinant): %d \n",mumps->id.ICNTL(33));CHKERRQ(ierr); 17316e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(35) (activate BLR based factorization): %d \n",mumps->id.ICNTL(35));CHKERRQ(ierr); 1732*a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(36) (choice of BLR factorization variant): %d \n",mumps->id.ICNTL(36));CHKERRQ(ierr); 1733*a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(38) (estimated compression rate of LU factors): %d \n",mumps->id.ICNTL(38));CHKERRQ(ierr); 1734f6c57405SHong Zhang 1735a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(1) (relative pivoting threshold): %g \n",mumps->id.CNTL(1));CHKERRQ(ierr); 1736a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(2) (stopping criterion of refinement): %g \n",mumps->id.CNTL(2));CHKERRQ(ierr); 1737ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(3) (absolute pivoting threshold): %g \n",mumps->id.CNTL(3));CHKERRQ(ierr); 1738ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(4) (value of static pivoting): %g \n",mumps->id.CNTL(4));CHKERRQ(ierr); 1739a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(5) (fixation for null pivots): %g \n",mumps->id.CNTL(5));CHKERRQ(ierr); 17406e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(7) (dropping parameter for BLR): %g \n",mumps->id.CNTL(7));CHKERRQ(ierr); 1741f6c57405SHong Zhang 1742f6c57405SHong Zhang /* infomation local to each processor */ 174334ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(1) (local estimated flops for the elimination after analysis): \n");CHKERRQ(ierr); 17441575c14dSBarry Smith ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr); 1745a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(1));CHKERRQ(ierr); 17462a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 174734ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(2) (local estimated flops for the assembly after factorization): \n");CHKERRQ(ierr); 1748a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(2));CHKERRQ(ierr); 17492a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 175034ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(3) (local estimated flops for the elimination after factorization): \n");CHKERRQ(ierr); 1751a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(3));CHKERRQ(ierr); 17522a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1753f6c57405SHong Zhang 175434ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(15) (estimated size of (in MB) MUMPS internal data for running numerical factorization): \n");CHKERRQ(ierr); 1755a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(15));CHKERRQ(ierr); 17562a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1757f6c57405SHong Zhang 175834ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(16) (size of (in MB) MUMPS internal data used during numerical factorization): \n");CHKERRQ(ierr); 1759a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(16));CHKERRQ(ierr); 17602a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1761f6c57405SHong Zhang 176234ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(23) (num of pivots eliminated on this processor after factorization): \n");CHKERRQ(ierr); 1763a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(23));CHKERRQ(ierr); 17642a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1765b34f08ffSHong Zhang 1766*a0e18203SThibaut Appel if (mumps->ninfo && mumps->ninfo <= 80){ 1767b34f08ffSHong Zhang PetscInt i; 1768b34f08ffSHong Zhang for (i=0; i<mumps->ninfo; i++){ 1769b34f08ffSHong Zhang ierr = PetscViewerASCIIPrintf(viewer, " INFO(%d): \n",mumps->info[i]);CHKERRQ(ierr); 1770b34f08ffSHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(mumps->info[i]));CHKERRQ(ierr); 17712a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1772b34f08ffSHong Zhang } 1773b34f08ffSHong Zhang } 17741575c14dSBarry Smith ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr); 1775f6c57405SHong Zhang 1776a5e57a09SHong Zhang if (!mumps->myid) { /* information from the host */ 1777a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(1) (global estimated flops for the elimination after analysis): %g \n",mumps->id.RINFOG(1));CHKERRQ(ierr); 1778a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(2) (global estimated flops for the assembly after factorization): %g \n",mumps->id.RINFOG(2));CHKERRQ(ierr); 1779a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(3) (global estimated flops for the elimination after factorization): %g \n",mumps->id.RINFOG(3));CHKERRQ(ierr); 1780a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," (RINFOG(12) RINFOG(13))*2^INFOG(34) (determinant): (%g,%g)*(2^%d)\n",mumps->id.RINFOG(12),mumps->id.RINFOG(13),mumps->id.INFOG(34));CHKERRQ(ierr); 1781f6c57405SHong Zhang 1782a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(3) (estimated real workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(3));CHKERRQ(ierr); 1783a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(4) (estimated integer workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(4));CHKERRQ(ierr); 1784a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(5) (estimated maximum front size in the complete tree): %d \n",mumps->id.INFOG(5));CHKERRQ(ierr); 1785a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(6) (number of nodes in the complete tree): %d \n",mumps->id.INFOG(6));CHKERRQ(ierr); 1786a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(7) (ordering option effectively use after analysis): %d \n",mumps->id.INFOG(7));CHKERRQ(ierr); 1787a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(8) (structural symmetry in percent of the permuted matrix after analysis): %d \n",mumps->id.INFOG(8));CHKERRQ(ierr); 1788a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(9) (total real/complex workspace to store the matrix factors after factorization): %d \n",mumps->id.INFOG(9));CHKERRQ(ierr); 1789a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(10) (total integer space store the matrix factors after factorization): %d \n",mumps->id.INFOG(10));CHKERRQ(ierr); 1790a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(11) (order of largest frontal matrix after factorization): %d \n",mumps->id.INFOG(11));CHKERRQ(ierr); 1791a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(12) (number of off-diagonal pivots): %d \n",mumps->id.INFOG(12));CHKERRQ(ierr); 1792a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(13) (number of delayed pivots after factorization): %d \n",mumps->id.INFOG(13));CHKERRQ(ierr); 1793a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(14) (number of memory compress after factorization): %d \n",mumps->id.INFOG(14));CHKERRQ(ierr); 1794a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(15) (number of steps of iterative refinement after solution): %d \n",mumps->id.INFOG(15));CHKERRQ(ierr); 1795a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(16) (estimated size (in MB) of all MUMPS internal data for factorization after analysis: value on the most memory consuming processor): %d \n",mumps->id.INFOG(16));CHKERRQ(ierr); 1796a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(17) (estimated size of all MUMPS internal data for factorization after analysis: sum over all processors): %d \n",mumps->id.INFOG(17));CHKERRQ(ierr); 1797a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(18) (size of all MUMPS internal data allocated during factorization: value on the most memory consuming processor): %d \n",mumps->id.INFOG(18));CHKERRQ(ierr); 1798a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(19) (size of all MUMPS internal data allocated during factorization: sum over all processors): %d \n",mumps->id.INFOG(19));CHKERRQ(ierr); 1799a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(20) (estimated number of entries in the factors): %d \n",mumps->id.INFOG(20));CHKERRQ(ierr); 1800a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(21) (size in MB of memory effectively used during factorization - value on the most memory consuming processor): %d \n",mumps->id.INFOG(21));CHKERRQ(ierr); 1801a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(22) (size in MB of memory effectively used during factorization - sum over all processors): %d \n",mumps->id.INFOG(22));CHKERRQ(ierr); 1802a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(23) (after analysis: value of ICNTL(6) effectively used): %d \n",mumps->id.INFOG(23));CHKERRQ(ierr); 1803a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(24) (after analysis: value of ICNTL(12) effectively used): %d \n",mumps->id.INFOG(24));CHKERRQ(ierr); 1804a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(25) (after factorization: number of pivots modified by static pivoting): %d \n",mumps->id.INFOG(25));CHKERRQ(ierr); 180540d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(28) (after factorization: number of null pivots encountered): %d\n",mumps->id.INFOG(28));CHKERRQ(ierr); 180640d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(29) (after factorization: effective number of entries in the factors (sum over all processors)): %d\n",mumps->id.INFOG(29));CHKERRQ(ierr); 180740d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(30, 31) (after solution: size in Mbytes of memory used during solution phase): %d, %d\n",mumps->id.INFOG(30),mumps->id.INFOG(31));CHKERRQ(ierr); 180840d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(32) (after analysis: type of analysis done): %d\n",mumps->id.INFOG(32));CHKERRQ(ierr); 180940d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(33) (value used for ICNTL(8)): %d\n",mumps->id.INFOG(33));CHKERRQ(ierr); 181040d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(34) (exponent of the determinant if determinant is requested): %d\n",mumps->id.INFOG(34));CHKERRQ(ierr); 1811*a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(35) (after factorization: number of entries taking into account BLR factor compression - sum over all processors): %d\n",mumps->id.INFOG(35));CHKERRQ(ierr); 1812*a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(36) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(36));CHKERRQ(ierr); 1813*a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(37) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - sum over all processors): %d \n",mumps->id.INFOG(37));CHKERRQ(ierr); 1814*a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(38) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(38));CHKERRQ(ierr); 1815*a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(39) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - sum over all processors): %d \n",mumps->id.INFOG(39));CHKERRQ(ierr); 1816f6c57405SHong Zhang } 1817f6c57405SHong Zhang } 1818cb828f0fSHong Zhang } 1819f6c57405SHong Zhang PetscFunctionReturn(0); 1820f6c57405SHong Zhang } 1821f6c57405SHong Zhang 182235bd34faSBarry Smith PetscErrorCode MatGetInfo_MUMPS(Mat A,MatInfoType flag,MatInfo *info) 182335bd34faSBarry Smith { 1824e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)A->data; 182535bd34faSBarry Smith 182635bd34faSBarry Smith PetscFunctionBegin; 182735bd34faSBarry Smith info->block_size = 1.0; 1828cb828f0fSHong Zhang info->nz_allocated = mumps->id.INFOG(20); 1829cb828f0fSHong Zhang info->nz_used = mumps->id.INFOG(20); 183035bd34faSBarry Smith info->nz_unneeded = 0.0; 183135bd34faSBarry Smith info->assemblies = 0.0; 183235bd34faSBarry Smith info->mallocs = 0.0; 183335bd34faSBarry Smith info->memory = 0.0; 183435bd34faSBarry Smith info->fill_ratio_given = 0; 183535bd34faSBarry Smith info->fill_ratio_needed = 0; 183635bd34faSBarry Smith info->factor_mallocs = 0; 183735bd34faSBarry Smith PetscFunctionReturn(0); 183835bd34faSBarry Smith } 183935bd34faSBarry Smith 18405ccb76cbSHong Zhang /* -------------------------------------------------------------------------------------------*/ 18418e7ba810SStefano Zampini PetscErrorCode MatFactorSetSchurIS_MUMPS(Mat F, IS is) 18426444a565SStefano Zampini { 1843e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 18448e7ba810SStefano Zampini const PetscInt *idxs; 18458e7ba810SStefano Zampini PetscInt size,i; 18466444a565SStefano Zampini PetscErrorCode ierr; 18476444a565SStefano Zampini 18486444a565SStefano Zampini PetscFunctionBegin; 1849b3cb21ddSStefano Zampini ierr = ISGetLocalSize(is,&size);CHKERRQ(ierr); 18502d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 18513ab56b82SJunchao Zhang PetscBool ls,gs; /* gs is false if any rank other than root has non-empty IS */ 1852241dbb5eSStefano Zampini 18533ab56b82SJunchao Zhang ls = mumps->myid ? (size ? PETSC_FALSE : PETSC_TRUE) : PETSC_TRUE; /* always true on root; false on others if their size != 0 */ 18543ab56b82SJunchao Zhang ierr = MPI_Allreduce(&ls,&gs,1,MPIU_BOOL,MPI_LAND,mumps->petsc_comm);CHKERRQ(ierr); 1855241dbb5eSStefano Zampini if (!gs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MUMPS distributed parallel Schur complements not yet supported from PETSc\n"); 1856241dbb5eSStefano Zampini } 18576444a565SStefano Zampini if (mumps->id.size_schur != size) { 18586444a565SStefano Zampini ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr); 18596444a565SStefano Zampini mumps->id.size_schur = size; 18606444a565SStefano Zampini mumps->id.schur_lld = size; 18616444a565SStefano Zampini ierr = PetscMalloc2(size,&mumps->id.listvar_schur,size*size,&mumps->id.schur);CHKERRQ(ierr); 18626444a565SStefano Zampini } 1863b3cb21ddSStefano Zampini 1864b3cb21ddSStefano Zampini /* Schur complement matrix */ 1865b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.size_schur,(PetscScalar*)mumps->id.schur,&F->schur);CHKERRQ(ierr); 1866b3cb21ddSStefano Zampini if (mumps->sym == 1) { 1867b3cb21ddSStefano Zampini ierr = MatSetOption(F->schur,MAT_SPD,PETSC_TRUE);CHKERRQ(ierr); 1868b3cb21ddSStefano Zampini } 1869b3cb21ddSStefano Zampini 1870b3cb21ddSStefano Zampini /* MUMPS expects Fortran style indices */ 18718e7ba810SStefano Zampini ierr = ISGetIndices(is,&idxs);CHKERRQ(ierr); 18726444a565SStefano Zampini ierr = PetscMemcpy(mumps->id.listvar_schur,idxs,size*sizeof(PetscInt));CHKERRQ(ierr); 18738e7ba810SStefano Zampini for (i=0;i<size;i++) mumps->id.listvar_schur[i]++; 18748e7ba810SStefano Zampini ierr = ISRestoreIndices(is,&idxs);CHKERRQ(ierr); 18752d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 1876241dbb5eSStefano Zampini mumps->id.ICNTL(19) = 1; /* MUMPS returns Schur centralized on the host */ 1877241dbb5eSStefano Zampini } else { 18786444a565SStefano Zampini if (F->factortype == MAT_FACTOR_LU) { 187959ac8732SStefano Zampini mumps->id.ICNTL(19) = 3; /* MUMPS returns full matrix */ 18806444a565SStefano Zampini } else { 188159ac8732SStefano Zampini mumps->id.ICNTL(19) = 2; /* MUMPS returns lower triangular part */ 18826444a565SStefano Zampini } 1883241dbb5eSStefano Zampini } 188459ac8732SStefano Zampini /* set a special value of ICNTL (not handled my MUMPS) to be used in the solve phase by PETSc */ 1885b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 18866444a565SStefano Zampini PetscFunctionReturn(0); 18876444a565SStefano Zampini } 188859ac8732SStefano Zampini 18896444a565SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 18905a05ddb0SStefano Zampini PetscErrorCode MatFactorCreateSchurComplement_MUMPS(Mat F,Mat* S) 18916444a565SStefano Zampini { 18926444a565SStefano Zampini Mat St; 1893e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 18946444a565SStefano Zampini PetscScalar *array; 18956444a565SStefano Zampini #if defined(PETSC_USE_COMPLEX) 18968ac429a0SStefano Zampini PetscScalar im = PetscSqrtScalar((PetscScalar)-1.0); 18976444a565SStefano Zampini #endif 18986444a565SStefano Zampini PetscErrorCode ierr; 18996444a565SStefano Zampini 19006444a565SStefano Zampini PetscFunctionBegin; 19015a05ddb0SStefano Zampini if (!mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it"); 1902241dbb5eSStefano Zampini ierr = MatCreate(PETSC_COMM_SELF,&St);CHKERRQ(ierr); 19036444a565SStefano Zampini ierr = MatSetSizes(St,PETSC_DECIDE,PETSC_DECIDE,mumps->id.size_schur,mumps->id.size_schur);CHKERRQ(ierr); 19046444a565SStefano Zampini ierr = MatSetType(St,MATDENSE);CHKERRQ(ierr); 19056444a565SStefano Zampini ierr = MatSetUp(St);CHKERRQ(ierr); 19066444a565SStefano Zampini ierr = MatDenseGetArray(St,&array);CHKERRQ(ierr); 190759ac8732SStefano Zampini if (!mumps->sym) { /* MUMPS always return a full matrix */ 19086444a565SStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 19096444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19106444a565SStefano Zampini for (i=0;i<N;i++) { 19116444a565SStefano Zampini for (j=0;j<N;j++) { 19126444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19136444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19146444a565SStefano Zampini #else 19156444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19166444a565SStefano Zampini #endif 19176444a565SStefano Zampini array[j*N+i] = val; 19186444a565SStefano Zampini } 19196444a565SStefano Zampini } 19206444a565SStefano Zampini } else { /* stored by columns */ 19216444a565SStefano Zampini ierr = PetscMemcpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur*sizeof(PetscScalar));CHKERRQ(ierr); 19226444a565SStefano Zampini } 19236444a565SStefano Zampini } else { /* either full or lower-triangular (not packed) */ 19246444a565SStefano Zampini if (mumps->id.ICNTL(19) == 2) { /* lower triangular stored by columns */ 19256444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19266444a565SStefano Zampini for (i=0;i<N;i++) { 19276444a565SStefano Zampini for (j=i;j<N;j++) { 19286444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19296444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19306444a565SStefano Zampini #else 19316444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19326444a565SStefano Zampini #endif 19336444a565SStefano Zampini array[i*N+j] = val; 19346444a565SStefano Zampini array[j*N+i] = val; 19356444a565SStefano Zampini } 19366444a565SStefano Zampini } 19376444a565SStefano Zampini } else if (mumps->id.ICNTL(19) == 3) { /* full matrix */ 19386444a565SStefano Zampini ierr = PetscMemcpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur*sizeof(PetscScalar));CHKERRQ(ierr); 19396444a565SStefano Zampini } else { /* ICNTL(19) == 1 lower triangular stored by rows */ 19406444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19416444a565SStefano Zampini for (i=0;i<N;i++) { 19426444a565SStefano Zampini for (j=0;j<i+1;j++) { 19436444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19446444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19456444a565SStefano Zampini #else 19466444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19476444a565SStefano Zampini #endif 19486444a565SStefano Zampini array[i*N+j] = val; 19496444a565SStefano Zampini array[j*N+i] = val; 19506444a565SStefano Zampini } 19516444a565SStefano Zampini } 19526444a565SStefano Zampini } 19536444a565SStefano Zampini } 19546444a565SStefano Zampini ierr = MatDenseRestoreArray(St,&array);CHKERRQ(ierr); 19556444a565SStefano Zampini *S = St; 19566444a565SStefano Zampini PetscFunctionReturn(0); 19576444a565SStefano Zampini } 19586444a565SStefano Zampini 195959ac8732SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 19605ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt ival) 19615ccb76cbSHong Zhang { 1962e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 19635ccb76cbSHong Zhang 19645ccb76cbSHong Zhang PetscFunctionBegin; 1965a5e57a09SHong Zhang mumps->id.ICNTL(icntl) = ival; 19665ccb76cbSHong Zhang PetscFunctionReturn(0); 19675ccb76cbSHong Zhang } 19685ccb76cbSHong Zhang 1969bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt *ival) 1970bc6112feSHong Zhang { 1971e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1972bc6112feSHong Zhang 1973bc6112feSHong Zhang PetscFunctionBegin; 1974bc6112feSHong Zhang *ival = mumps->id.ICNTL(icntl); 1975bc6112feSHong Zhang PetscFunctionReturn(0); 1976bc6112feSHong Zhang } 1977bc6112feSHong Zhang 19785ccb76cbSHong Zhang /*@ 19795ccb76cbSHong Zhang MatMumpsSetIcntl - Set MUMPS parameter ICNTL() 19805ccb76cbSHong Zhang 19815ccb76cbSHong Zhang Logically Collective on Mat 19825ccb76cbSHong Zhang 19835ccb76cbSHong Zhang Input Parameters: 19845ccb76cbSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 19855ccb76cbSHong Zhang . icntl - index of MUMPS parameter array ICNTL() 19865ccb76cbSHong Zhang - ival - value of MUMPS ICNTL(icntl) 19875ccb76cbSHong Zhang 19885ccb76cbSHong Zhang Options Database: 19895ccb76cbSHong Zhang . -mat_mumps_icntl_<icntl> <ival> 19905ccb76cbSHong Zhang 19915ccb76cbSHong Zhang Level: beginner 19925ccb76cbSHong Zhang 199396a0c994SBarry Smith References: 199496a0c994SBarry Smith . MUMPS Users' Guide 19955ccb76cbSHong Zhang 19969fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 19975ccb76cbSHong Zhang @*/ 19985ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl(Mat F,PetscInt icntl,PetscInt ival) 19995ccb76cbSHong Zhang { 20005ccb76cbSHong Zhang PetscErrorCode ierr; 20015ccb76cbSHong Zhang 20025ccb76cbSHong Zhang PetscFunctionBegin; 20032989dfd4SHong Zhang PetscValidType(F,1); 20042989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 20055ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 20065ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,ival,3); 20075ccb76cbSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetIcntl_C",(Mat,PetscInt,PetscInt),(F,icntl,ival));CHKERRQ(ierr); 20085ccb76cbSHong Zhang PetscFunctionReturn(0); 20095ccb76cbSHong Zhang } 20105ccb76cbSHong Zhang 2011a21f80fcSHong Zhang /*@ 2012a21f80fcSHong Zhang MatMumpsGetIcntl - Get MUMPS parameter ICNTL() 2013a21f80fcSHong Zhang 2014a21f80fcSHong Zhang Logically Collective on Mat 2015a21f80fcSHong Zhang 2016a21f80fcSHong Zhang Input Parameters: 2017a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2018a21f80fcSHong Zhang - icntl - index of MUMPS parameter array ICNTL() 2019a21f80fcSHong Zhang 2020a21f80fcSHong Zhang Output Parameter: 2021a21f80fcSHong Zhang . ival - value of MUMPS ICNTL(icntl) 2022a21f80fcSHong Zhang 2023a21f80fcSHong Zhang Level: beginner 2024a21f80fcSHong Zhang 202596a0c994SBarry Smith References: 202696a0c994SBarry Smith . MUMPS Users' Guide 2027a21f80fcSHong Zhang 20289fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2029a21f80fcSHong Zhang @*/ 2030bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl(Mat F,PetscInt icntl,PetscInt *ival) 2031bc6112feSHong Zhang { 2032bc6112feSHong Zhang PetscErrorCode ierr; 2033bc6112feSHong Zhang 2034bc6112feSHong Zhang PetscFunctionBegin; 20352989dfd4SHong Zhang PetscValidType(F,1); 20362989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2037bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2038bc6112feSHong Zhang PetscValidIntPointer(ival,3); 20392989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetIcntl_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2040bc6112feSHong Zhang PetscFunctionReturn(0); 2041bc6112feSHong Zhang } 2042bc6112feSHong Zhang 20438928b65cSHong Zhang /* -------------------------------------------------------------------------------------------*/ 20448928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal val) 20458928b65cSHong Zhang { 2046e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 20478928b65cSHong Zhang 20488928b65cSHong Zhang PetscFunctionBegin; 20498928b65cSHong Zhang mumps->id.CNTL(icntl) = val; 20508928b65cSHong Zhang PetscFunctionReturn(0); 20518928b65cSHong Zhang } 20528928b65cSHong Zhang 2053bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal *val) 2054bc6112feSHong Zhang { 2055e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2056bc6112feSHong Zhang 2057bc6112feSHong Zhang PetscFunctionBegin; 2058bc6112feSHong Zhang *val = mumps->id.CNTL(icntl); 2059bc6112feSHong Zhang PetscFunctionReturn(0); 2060bc6112feSHong Zhang } 2061bc6112feSHong Zhang 20628928b65cSHong Zhang /*@ 20638928b65cSHong Zhang MatMumpsSetCntl - Set MUMPS parameter CNTL() 20648928b65cSHong Zhang 20658928b65cSHong Zhang Logically Collective on Mat 20668928b65cSHong Zhang 20678928b65cSHong Zhang Input Parameters: 20688928b65cSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 20698928b65cSHong Zhang . icntl - index of MUMPS parameter array CNTL() 20708928b65cSHong Zhang - val - value of MUMPS CNTL(icntl) 20718928b65cSHong Zhang 20728928b65cSHong Zhang Options Database: 20738928b65cSHong Zhang . -mat_mumps_cntl_<icntl> <val> 20748928b65cSHong Zhang 20758928b65cSHong Zhang Level: beginner 20768928b65cSHong Zhang 207796a0c994SBarry Smith References: 207896a0c994SBarry Smith . MUMPS Users' Guide 20798928b65cSHong Zhang 20809fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 20818928b65cSHong Zhang @*/ 20828928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl(Mat F,PetscInt icntl,PetscReal val) 20838928b65cSHong Zhang { 20848928b65cSHong Zhang PetscErrorCode ierr; 20858928b65cSHong Zhang 20868928b65cSHong Zhang PetscFunctionBegin; 20872989dfd4SHong Zhang PetscValidType(F,1); 20882989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 20898928b65cSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2090bc6112feSHong Zhang PetscValidLogicalCollectiveReal(F,val,3); 20918928b65cSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetCntl_C",(Mat,PetscInt,PetscReal),(F,icntl,val));CHKERRQ(ierr); 20928928b65cSHong Zhang PetscFunctionReturn(0); 20938928b65cSHong Zhang } 20948928b65cSHong Zhang 2095a21f80fcSHong Zhang /*@ 2096a21f80fcSHong Zhang MatMumpsGetCntl - Get MUMPS parameter CNTL() 2097a21f80fcSHong Zhang 2098a21f80fcSHong Zhang Logically Collective on Mat 2099a21f80fcSHong Zhang 2100a21f80fcSHong Zhang Input Parameters: 2101a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2102a21f80fcSHong Zhang - icntl - index of MUMPS parameter array CNTL() 2103a21f80fcSHong Zhang 2104a21f80fcSHong Zhang Output Parameter: 2105a21f80fcSHong Zhang . val - value of MUMPS CNTL(icntl) 2106a21f80fcSHong Zhang 2107a21f80fcSHong Zhang Level: beginner 2108a21f80fcSHong Zhang 210996a0c994SBarry Smith References: 211096a0c994SBarry Smith . MUMPS Users' Guide 2111a21f80fcSHong Zhang 21129fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2113a21f80fcSHong Zhang @*/ 2114bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl(Mat F,PetscInt icntl,PetscReal *val) 2115bc6112feSHong Zhang { 2116bc6112feSHong Zhang PetscErrorCode ierr; 2117bc6112feSHong Zhang 2118bc6112feSHong Zhang PetscFunctionBegin; 21192989dfd4SHong Zhang PetscValidType(F,1); 21202989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2121bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2122bc6112feSHong Zhang PetscValidRealPointer(val,3); 21232989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetCntl_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2124bc6112feSHong Zhang PetscFunctionReturn(0); 2125bc6112feSHong Zhang } 2126bc6112feSHong Zhang 2127ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo_MUMPS(Mat F,PetscInt icntl,PetscInt *info) 2128bc6112feSHong Zhang { 2129e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2130bc6112feSHong Zhang 2131bc6112feSHong Zhang PetscFunctionBegin; 2132bc6112feSHong Zhang *info = mumps->id.INFO(icntl); 2133bc6112feSHong Zhang PetscFunctionReturn(0); 2134bc6112feSHong Zhang } 2135bc6112feSHong Zhang 2136ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog_MUMPS(Mat F,PetscInt icntl,PetscInt *infog) 2137bc6112feSHong Zhang { 2138e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2139bc6112feSHong Zhang 2140bc6112feSHong Zhang PetscFunctionBegin; 2141bc6112feSHong Zhang *infog = mumps->id.INFOG(icntl); 2142bc6112feSHong Zhang PetscFunctionReturn(0); 2143bc6112feSHong Zhang } 2144bc6112feSHong Zhang 2145ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfo) 2146bc6112feSHong Zhang { 2147e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2148bc6112feSHong Zhang 2149bc6112feSHong Zhang PetscFunctionBegin; 2150bc6112feSHong Zhang *rinfo = mumps->id.RINFO(icntl); 2151bc6112feSHong Zhang PetscFunctionReturn(0); 2152bc6112feSHong Zhang } 2153bc6112feSHong Zhang 2154ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfog) 2155bc6112feSHong Zhang { 2156e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2157bc6112feSHong Zhang 2158bc6112feSHong Zhang PetscFunctionBegin; 2159bc6112feSHong Zhang *rinfog = mumps->id.RINFOG(icntl); 2160bc6112feSHong Zhang PetscFunctionReturn(0); 2161bc6112feSHong Zhang } 2162bc6112feSHong Zhang 216389a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse_MUMPS(Mat F,Mat spRHS) 2164bb599dfdSHong Zhang { 2165bb599dfdSHong Zhang PetscErrorCode ierr; 21660e6b8875SHong Zhang Mat Bt = NULL,Btseq = NULL; 21670e6b8875SHong Zhang PetscBool flg; 2168bb599dfdSHong Zhang Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2169bb599dfdSHong Zhang PetscScalar *aa; 2170bb599dfdSHong Zhang PetscInt spnr,*ia,*ja; 2171bb599dfdSHong Zhang 2172bb599dfdSHong Zhang PetscFunctionBegin; 2173e3f2db6aSHong Zhang PetscValidIntPointer(spRHS,2); 21740e6b8875SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)spRHS,MATTRANSPOSEMAT,&flg);CHKERRQ(ierr); 21750e6b8875SHong Zhang if (flg) { 2176bb599dfdSHong Zhang ierr = MatTransposeGetMat(spRHS,&Bt);CHKERRQ(ierr); 21770e6b8875SHong Zhang } else SETERRQ(PetscObjectComm((PetscObject)spRHS),PETSC_ERR_ARG_WRONG,"Matrix spRHS must be type MATTRANSPOSEMAT matrix"); 2178bb599dfdSHong Zhang 2179bb599dfdSHong Zhang ierr = MatMumpsSetIcntl(F,30,1);CHKERRQ(ierr); 2180bb599dfdSHong Zhang 21812d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 21820e6b8875SHong Zhang Mat_MPIAIJ *b = (Mat_MPIAIJ*)Bt->data; 21830e6b8875SHong Zhang Btseq = b->A; 21840e6b8875SHong Zhang } else { 21850e6b8875SHong Zhang Btseq = Bt; 21860e6b8875SHong Zhang } 21870e6b8875SHong Zhang 2188e3f2db6aSHong Zhang if (!mumps->myid) { 21890e6b8875SHong Zhang ierr = MatSeqAIJGetArray(Btseq,&aa);CHKERRQ(ierr); 21900e6b8875SHong Zhang ierr = MatGetRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 21910e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2192bb599dfdSHong Zhang 2193bb599dfdSHong Zhang mumps->id.irhs_ptr = ia; 2194bb599dfdSHong Zhang mumps->id.irhs_sparse = ja; 2195bb599dfdSHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 2196bb599dfdSHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 2197e3f2db6aSHong Zhang } else { 2198e3f2db6aSHong Zhang mumps->id.irhs_ptr = NULL; 2199e3f2db6aSHong Zhang mumps->id.irhs_sparse = NULL; 2200e3f2db6aSHong Zhang mumps->id.nz_rhs = 0; 2201e3f2db6aSHong Zhang mumps->id.rhs_sparse = NULL; 2202e3f2db6aSHong Zhang } 2203bb599dfdSHong Zhang mumps->id.ICNTL(20) = 1; /* rhs is sparse */ 2204e3f2db6aSHong Zhang mumps->id.ICNTL(21) = 0; /* solution is in assembled centralized format */ 2205bb599dfdSHong Zhang 2206bb599dfdSHong Zhang /* solve phase */ 2207bb599dfdSHong Zhang /*-------------*/ 2208bb599dfdSHong Zhang mumps->id.job = JOB_SOLVE; 22093ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 2210e3f2db6aSHong Zhang if (mumps->id.INFOG(1) < 0) 2211e3f2db6aSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 221214267174SHong Zhang 2213e3f2db6aSHong Zhang if (!mumps->myid) { 22140e6b8875SHong Zhang ierr = MatSeqAIJRestoreArray(Btseq,&aa);CHKERRQ(ierr); 22150e6b8875SHong Zhang ierr = MatRestoreRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 22160e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2217e3f2db6aSHong Zhang } 2218bb599dfdSHong Zhang PetscFunctionReturn(0); 2219bb599dfdSHong Zhang } 2220bb599dfdSHong Zhang 2221bb599dfdSHong Zhang /*@ 222289a9c03aSHong Zhang MatMumpsGetInverse - Get user-specified set of entries in inverse of A 2223bb599dfdSHong Zhang 2224bb599dfdSHong Zhang Logically Collective on Mat 2225bb599dfdSHong Zhang 2226bb599dfdSHong Zhang Input Parameters: 2227bb599dfdSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2228e3f2db6aSHong Zhang - spRHS - sequential sparse matrix in MATTRANSPOSEMAT format holding specified indices in processor[0] 2229bb599dfdSHong Zhang 2230bb599dfdSHong Zhang Output Parameter: 2231e3f2db6aSHong Zhang . spRHS - requested entries of inverse of A 2232bb599dfdSHong Zhang 2233bb599dfdSHong Zhang Level: beginner 2234bb599dfdSHong Zhang 2235bb599dfdSHong Zhang References: 2236bb599dfdSHong Zhang . MUMPS Users' Guide 2237bb599dfdSHong Zhang 2238bb599dfdSHong Zhang .seealso: MatGetFactor(), MatCreateTranspose() 2239bb599dfdSHong Zhang @*/ 224089a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse(Mat F,Mat spRHS) 2241bb599dfdSHong Zhang { 2242bb599dfdSHong Zhang PetscErrorCode ierr; 2243bb599dfdSHong Zhang 2244bb599dfdSHong Zhang PetscFunctionBegin; 2245bb599dfdSHong Zhang PetscValidType(F,1); 2246bb599dfdSHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 224789a9c03aSHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverse_C",(Mat,Mat),(F,spRHS));CHKERRQ(ierr); 2248bb599dfdSHong Zhang PetscFunctionReturn(0); 2249bb599dfdSHong Zhang } 2250bb599dfdSHong Zhang 22510e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose_MUMPS(Mat F,Mat spRHST) 22520e6b8875SHong Zhang { 22530e6b8875SHong Zhang PetscErrorCode ierr; 22540e6b8875SHong Zhang Mat spRHS; 22550e6b8875SHong Zhang 22560e6b8875SHong Zhang PetscFunctionBegin; 22570e6b8875SHong Zhang ierr = MatCreateTranspose(spRHST,&spRHS);CHKERRQ(ierr); 22580e6b8875SHong Zhang ierr = MatMumpsGetInverse_MUMPS(F,spRHS);CHKERRQ(ierr); 22590e6b8875SHong Zhang ierr = MatDestroy(&spRHS);CHKERRQ(ierr); 22600e6b8875SHong Zhang PetscFunctionReturn(0); 22610e6b8875SHong Zhang } 22620e6b8875SHong Zhang 22630e6b8875SHong Zhang /*@ 2264eef1237cSHong Zhang MatMumpsGetInverseTranspose - Get user-specified set of entries in inverse of matrix A^T 22650e6b8875SHong Zhang 22660e6b8875SHong Zhang Logically Collective on Mat 22670e6b8875SHong Zhang 22680e6b8875SHong Zhang Input Parameters: 22690e6b8875SHong Zhang + F - the factored matrix of A obtained by calling MatGetFactor() from PETSc-MUMPS interface 22700e6b8875SHong Zhang - spRHST - sequential sparse matrix in MATAIJ format holding specified indices of A^T in processor[0] 22710e6b8875SHong Zhang 22720e6b8875SHong Zhang Output Parameter: 22730e6b8875SHong Zhang . spRHST - requested entries of inverse of A^T 22740e6b8875SHong Zhang 22750e6b8875SHong Zhang Level: beginner 22760e6b8875SHong Zhang 22770e6b8875SHong Zhang References: 22780e6b8875SHong Zhang . MUMPS Users' Guide 22790e6b8875SHong Zhang 22800e6b8875SHong Zhang .seealso: MatGetFactor(), MatCreateTranspose(), MatMumpsGetInverse() 22810e6b8875SHong Zhang @*/ 22820e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose(Mat F,Mat spRHST) 22830e6b8875SHong Zhang { 22840e6b8875SHong Zhang PetscErrorCode ierr; 22850e6b8875SHong Zhang PetscBool flg; 22860e6b8875SHong Zhang 22870e6b8875SHong Zhang PetscFunctionBegin; 22880e6b8875SHong Zhang PetscValidType(F,1); 22890e6b8875SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 22900e6b8875SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)spRHST,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 22910e6b8875SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)spRHST),PETSC_ERR_ARG_WRONG,"Matrix spRHST must be MATAIJ matrix"); 22920e6b8875SHong Zhang 22930e6b8875SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverseTranspose_C",(Mat,Mat),(F,spRHST));CHKERRQ(ierr); 22940e6b8875SHong Zhang PetscFunctionReturn(0); 22950e6b8875SHong Zhang } 22960e6b8875SHong Zhang 2297a21f80fcSHong Zhang /*@ 2298a21f80fcSHong Zhang MatMumpsGetInfo - Get MUMPS parameter INFO() 2299a21f80fcSHong Zhang 2300a21f80fcSHong Zhang Logically Collective on Mat 2301a21f80fcSHong Zhang 2302a21f80fcSHong Zhang Input Parameters: 2303a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2304a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFO() 2305a21f80fcSHong Zhang 2306a21f80fcSHong Zhang Output Parameter: 2307a21f80fcSHong Zhang . ival - value of MUMPS INFO(icntl) 2308a21f80fcSHong Zhang 2309a21f80fcSHong Zhang Level: beginner 2310a21f80fcSHong Zhang 231196a0c994SBarry Smith References: 231296a0c994SBarry Smith . MUMPS Users' Guide 2313a21f80fcSHong Zhang 23149fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2315a21f80fcSHong Zhang @*/ 2316ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo(Mat F,PetscInt icntl,PetscInt *ival) 2317bc6112feSHong Zhang { 2318bc6112feSHong Zhang PetscErrorCode ierr; 2319bc6112feSHong Zhang 2320bc6112feSHong Zhang PetscFunctionBegin; 23212989dfd4SHong Zhang PetscValidType(F,1); 23222989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2323ca810319SHong Zhang PetscValidIntPointer(ival,3); 23242989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfo_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2325bc6112feSHong Zhang PetscFunctionReturn(0); 2326bc6112feSHong Zhang } 2327bc6112feSHong Zhang 2328a21f80fcSHong Zhang /*@ 2329a21f80fcSHong Zhang MatMumpsGetInfog - Get MUMPS parameter INFOG() 2330a21f80fcSHong Zhang 2331a21f80fcSHong Zhang Logically Collective on Mat 2332a21f80fcSHong Zhang 2333a21f80fcSHong Zhang Input Parameters: 2334a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2335a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFOG() 2336a21f80fcSHong Zhang 2337a21f80fcSHong Zhang Output Parameter: 2338a21f80fcSHong Zhang . ival - value of MUMPS INFOG(icntl) 2339a21f80fcSHong Zhang 2340a21f80fcSHong Zhang Level: beginner 2341a21f80fcSHong Zhang 234296a0c994SBarry Smith References: 234396a0c994SBarry Smith . MUMPS Users' Guide 2344a21f80fcSHong Zhang 23459fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2346a21f80fcSHong Zhang @*/ 2347ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog(Mat F,PetscInt icntl,PetscInt *ival) 2348bc6112feSHong Zhang { 2349bc6112feSHong Zhang PetscErrorCode ierr; 2350bc6112feSHong Zhang 2351bc6112feSHong Zhang PetscFunctionBegin; 23522989dfd4SHong Zhang PetscValidType(F,1); 23532989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2354ca810319SHong Zhang PetscValidIntPointer(ival,3); 23552989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfog_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2356bc6112feSHong Zhang PetscFunctionReturn(0); 2357bc6112feSHong Zhang } 2358bc6112feSHong Zhang 2359a21f80fcSHong Zhang /*@ 2360a21f80fcSHong Zhang MatMumpsGetRinfo - Get MUMPS parameter RINFO() 2361a21f80fcSHong Zhang 2362a21f80fcSHong Zhang Logically Collective on Mat 2363a21f80fcSHong Zhang 2364a21f80fcSHong Zhang Input Parameters: 2365a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2366a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFO() 2367a21f80fcSHong Zhang 2368a21f80fcSHong Zhang Output Parameter: 2369a21f80fcSHong Zhang . val - value of MUMPS RINFO(icntl) 2370a21f80fcSHong Zhang 2371a21f80fcSHong Zhang Level: beginner 2372a21f80fcSHong Zhang 237396a0c994SBarry Smith References: 237496a0c994SBarry Smith . MUMPS Users' Guide 2375a21f80fcSHong Zhang 23769fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2377a21f80fcSHong Zhang @*/ 2378ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo(Mat F,PetscInt icntl,PetscReal *val) 2379bc6112feSHong Zhang { 2380bc6112feSHong Zhang PetscErrorCode ierr; 2381bc6112feSHong Zhang 2382bc6112feSHong Zhang PetscFunctionBegin; 23832989dfd4SHong Zhang PetscValidType(F,1); 23842989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2385bc6112feSHong Zhang PetscValidRealPointer(val,3); 23862989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfo_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2387bc6112feSHong Zhang PetscFunctionReturn(0); 2388bc6112feSHong Zhang } 2389bc6112feSHong Zhang 2390a21f80fcSHong Zhang /*@ 2391a21f80fcSHong Zhang MatMumpsGetRinfog - Get MUMPS parameter RINFOG() 2392a21f80fcSHong Zhang 2393a21f80fcSHong Zhang Logically Collective on Mat 2394a21f80fcSHong Zhang 2395a21f80fcSHong Zhang Input Parameters: 2396a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2397a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFOG() 2398a21f80fcSHong Zhang 2399a21f80fcSHong Zhang Output Parameter: 2400a21f80fcSHong Zhang . val - value of MUMPS RINFOG(icntl) 2401a21f80fcSHong Zhang 2402a21f80fcSHong Zhang Level: beginner 2403a21f80fcSHong Zhang 240496a0c994SBarry Smith References: 240596a0c994SBarry Smith . MUMPS Users' Guide 2406a21f80fcSHong Zhang 24079fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2408a21f80fcSHong Zhang @*/ 2409ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog(Mat F,PetscInt icntl,PetscReal *val) 2410bc6112feSHong Zhang { 2411bc6112feSHong Zhang PetscErrorCode ierr; 2412bc6112feSHong Zhang 2413bc6112feSHong Zhang PetscFunctionBegin; 24142989dfd4SHong Zhang PetscValidType(F,1); 24152989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2416bc6112feSHong Zhang PetscValidRealPointer(val,3); 24172989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfog_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2418bc6112feSHong Zhang PetscFunctionReturn(0); 2419bc6112feSHong Zhang } 2420bc6112feSHong Zhang 242124b6179bSKris Buschelman /*MC 24222692d6eeSBarry Smith MATSOLVERMUMPS - A matrix type providing direct solvers (LU and Cholesky) for 242324b6179bSKris Buschelman distributed and sequential matrices via the external package MUMPS. 242424b6179bSKris Buschelman 242541c8de11SBarry Smith Works with MATAIJ and MATSBAIJ matrices 242624b6179bSKris Buschelman 2427c2b89b5dSBarry Smith Use ./configure --download-mumps --download-scalapack --download-parmetis --download-metis --download-ptscotch to have PETSc installed with MUMPS 2428c2b89b5dSBarry Smith 2429217d3b1eSJunchao Zhang Use ./configure --with-openmp --download-hwloc (or --with-hwloc) to enable running MUMPS in MPI+OpenMP hybrid mode and non-MUMPS in flat-MPI mode. See details below. 2430217d3b1eSJunchao Zhang 24313ca39a21SBarry Smith Use -pc_type cholesky or lu -pc_factor_mat_solver_type mumps to use this direct solver 2432c2b89b5dSBarry Smith 243324b6179bSKris Buschelman Options Database Keys: 24344422a9fcSPatrick Sanan + -mat_mumps_icntl_1 - ICNTL(1): output stream for error messages 24354422a9fcSPatrick Sanan . -mat_mumps_icntl_2 - ICNTL(2): output stream for diagnostic printing, statistics, and warning 24364422a9fcSPatrick Sanan . -mat_mumps_icntl_3 - ICNTL(3): output stream for global information, collected on the host 24374422a9fcSPatrick Sanan . -mat_mumps_icntl_4 - ICNTL(4): level of printing (0 to 4) 24384422a9fcSPatrick Sanan . -mat_mumps_icntl_6 - ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7) 24394422a9fcSPatrick Sanan . -mat_mumps_icntl_7 - ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis 24404422a9fcSPatrick Sanan . -mat_mumps_icntl_8 - ICNTL(8): scaling strategy (-2 to 8 or 77) 24414422a9fcSPatrick Sanan . -mat_mumps_icntl_10 - ICNTL(10): max num of refinements 24424422a9fcSPatrick Sanan . -mat_mumps_icntl_11 - ICNTL(11): statistics related to an error analysis (via -ksp_view) 24434422a9fcSPatrick Sanan . -mat_mumps_icntl_12 - ICNTL(12): an ordering strategy for symmetric matrices (0 to 3) 24444422a9fcSPatrick Sanan . -mat_mumps_icntl_13 - ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting 24454422a9fcSPatrick Sanan . -mat_mumps_icntl_14 - ICNTL(14): percentage increase in the estimated working space 24464422a9fcSPatrick Sanan . -mat_mumps_icntl_19 - ICNTL(19): computes the Schur complement 24474422a9fcSPatrick Sanan . -mat_mumps_icntl_22 - ICNTL(22): in-core/out-of-core factorization and solve (0 or 1) 24484422a9fcSPatrick Sanan . -mat_mumps_icntl_23 - ICNTL(23): max size of the working memory (MB) that can allocate per processor 24494422a9fcSPatrick Sanan . -mat_mumps_icntl_24 - ICNTL(24): detection of null pivot rows (0 or 1) 24504422a9fcSPatrick Sanan . -mat_mumps_icntl_25 - ICNTL(25): compute a solution of a deficient matrix and a null space basis 24514422a9fcSPatrick Sanan . -mat_mumps_icntl_26 - ICNTL(26): drives the solution phase if a Schur complement matrix 24524422a9fcSPatrick Sanan . -mat_mumps_icntl_28 - ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering 24534422a9fcSPatrick Sanan . -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis 24544422a9fcSPatrick Sanan . -mat_mumps_icntl_30 - ICNTL(30): compute user-specified set of entries in inv(A) 24554422a9fcSPatrick Sanan . -mat_mumps_icntl_31 - ICNTL(31): indicates which factors may be discarded during factorization 24564422a9fcSPatrick Sanan . -mat_mumps_icntl_33 - ICNTL(33): compute determinant 2457*a0e18203SThibaut Appel . -mat_mumps_icntl_35 - ICNTL(35): level of activation of BLR (Block Low-Rank) feature 2458*a0e18203SThibaut Appel . -mat_mumps_icntl_36 - ICNTL(36): controls the choice of BLR factorization variant 2459*a0e18203SThibaut Appel . -mat_mumps_icntl_38 - ICNTL(38): sets the estimated compression rate of LU factors with BLR 24604422a9fcSPatrick Sanan . -mat_mumps_cntl_1 - CNTL(1): relative pivoting threshold 24614422a9fcSPatrick Sanan . -mat_mumps_cntl_2 - CNTL(2): stopping criterion of refinement 24624422a9fcSPatrick Sanan . -mat_mumps_cntl_3 - CNTL(3): absolute pivoting threshold 24634422a9fcSPatrick Sanan . -mat_mumps_cntl_4 - CNTL(4): value for static pivoting 2464217d3b1eSJunchao Zhang . -mat_mumps_cntl_5 - CNTL(5): fixation for null pivots 2465*a0e18203SThibaut Appel . -mat_mumps_cntl_7 - CNTL(7): precision of the dropping parameter used during BLR factorization 2466217d3b1eSJunchao Zhang - -mat_mumps_use_omp_threads [m] - run MUMPS in MPI+OpenMP hybrid mode as if omp_set_num_threads(m) is called before calling MUMPS. 2467217d3b1eSJunchao Zhang Default might be the number of cores per CPU package (socket) as reported by hwloc and suggested by the MUMPS manual. 246824b6179bSKris Buschelman 246924b6179bSKris Buschelman Level: beginner 247024b6179bSKris Buschelman 247195452b02SPatrick Sanan Notes: 2472c0decd05SBarry Smith When a MUMPS factorization fails inside a KSP solve, for example with a KSP_DIVERGED_PC_FAILED, one can find the MUMPS information about the failure by calling 24739fc87aa7SBarry Smith $ KSPGetPC(ksp,&pc); 24749fc87aa7SBarry Smith $ PCFactorGetMatrix(pc,&mat); 24759fc87aa7SBarry Smith $ MatMumpsGetInfo(mat,....); 24769fc87aa7SBarry Smith $ MatMumpsGetInfog(mat,....); etc. 24779fc87aa7SBarry Smith Or you can run with -ksp_error_if_not_converged and the program will be stopped and the information printed in the error message. 24789fc87aa7SBarry Smith 2479217d3b1eSJunchao Zhang If you want to run MUMPS in MPI+OpenMP hybrid mode (i.e., enable multithreading in MUMPS), but still want to run the non-MUMPS part 2480217d3b1eSJunchao Zhang (i.e., PETSc part) of your code in the so-called flat-MPI (aka pure-MPI) mode, you need to configure PETSc with --with-openmp --download-hwloc 2481217d3b1eSJunchao Zhang (or --with-hwloc), and have an MPI that supports MPI-3.0's process shared memory (which is usually available). Since MUMPS calls BLAS 2482217d3b1eSJunchao Zhang libraries, to really get performance, you should have multithreaded BLAS libraries such as Intel MKL, AMD ACML, Cray libSci or open sourced 2483217d3b1eSJunchao Zhang OpenBLAS (PETSc has configure options to install/specify them). With these conditions met, you can run your program as before but with 2484217d3b1eSJunchao Zhang an extra option -mat_mumps_use_omp_threads [m]. It works as if we set OMP_NUM_THREADS=m to MUMPS, with m defaults to the number of cores 2485217d3b1eSJunchao Zhang per CPU socket (or package, in hwloc term), or number of PETSc MPI processes on a node, whichever is smaller. 2486217d3b1eSJunchao Zhang 2487217d3b1eSJunchao Zhang By flat-MPI or pure-MPI mode, it means you run your code with as many MPI ranks as the number of cores. For example, 2488217d3b1eSJunchao Zhang if a compute node has 32 cores and you run on two nodes, you may use "mpirun -n 64 ./test". To run MPI+OpenMP hybrid MUMPS, 2489217d3b1eSJunchao Zhang the tranditional way is to set OMP_NUM_THREADS and run with fewer MPI ranks than cores. For example, if you want to have 16 OpenMP 2490217d3b1eSJunchao Zhang threads per rank, then you may use "export OMP_NUM_THREADS=16 && mpirun -n 4 ./test". The problem of this approach is that the non-MUMPS 2491217d3b1eSJunchao Zhang part of your code is run with fewer cores and CPUs are wasted. "-mat_mumps_use_omp_threads [m]" provides an alternative such that 2492217d3b1eSJunchao Zhang you can stil run your code with as many MPI ranks as the number of cores, but have MUMPS run in MPI+OpenMP hybrid mode. In our example, 2493217d3b1eSJunchao Zhang you can use "mpirun -n 64 ./test -mat_mumps_use_omp_threads 16". 2494217d3b1eSJunchao Zhang 2495217d3b1eSJunchao Zhang If you run your code through a job submission system, there are caveats in MPI rank mapping. We use MPI_Comm_split_type to get MPI 2496217d3b1eSJunchao Zhang processes on each compute node. Listing the processes in rank ascending order, we split processes on a node into consecutive groups of 2497217d3b1eSJunchao Zhang size m and create a communicator called omp_comm for each group. Rank 0 in an omp_comm is called the master rank, and others in the omp_comm 2498217d3b1eSJunchao Zhang are called slave ranks (or slaves). Only master ranks are seen to MUMPS and slaves are not. We will free CPUs assigned to slaves (might be set 2499217d3b1eSJunchao Zhang by CPU binding policies in job scripts) and make the CPUs available to the master so that OMP threads spawned by MUMPS can run on the CPUs. 2500217d3b1eSJunchao Zhang In a multi-socket compute node, MPI rank mapping is an issue. Still use the above example and suppose your compute node has two sockets, 2501217d3b1eSJunchao Zhang if you interleave MPI ranks on the two sockets, in other words, even ranks are placed on socket 0, and odd ranks are on socket 1, and bind 2502217d3b1eSJunchao Zhang MPI ranks to cores, then with -mat_mumps_use_omp_threads 16, a master rank (and threads it spawns) will use half cores in socket 0, and half 2503217d3b1eSJunchao Zhang cores in socket 1, that definitely hurts locality. On the other hand, if you map MPI ranks consecutively on the two sockets, then the 2504217d3b1eSJunchao Zhang problem will not happen. Therefore, when you use -mat_mumps_use_omp_threads, you need to keep an eye on your MPI rank mapping and CPU binding. 2505217d3b1eSJunchao Zhang For example, with the Slurm job scheduler, one can use srun --cpu-bind=verbsoe -m block:block to map consecutive MPI ranks to sockets and 2506217d3b1eSJunchao Zhang examine the mapping result. 2507217d3b1eSJunchao Zhang 2508217d3b1eSJunchao Zhang PETSc does not control thread binding in MUMPS. So to get best performance, one still has to set OMP_PROC_BIND and OMP_PLACES in job scripts, 2509217d3b1eSJunchao Zhang for example, export OMP_PLACES=threads and export OMP_PROC_BIND=spread. One does not need to export OMP_NUM_THREADS=m in job scripts as PETSc 2510217d3b1eSJunchao Zhang calls omp_set_num_threads(m) internally before calling MUMPS. 2511217d3b1eSJunchao Zhang 2512217d3b1eSJunchao Zhang References: 2513217d3b1eSJunchao Zhang + 1. - Heroux, Michael A., R. Brightwell, and Michael M. Wolf. "Bi-modal MPI and MPI+ threads computing on scalable multicore systems." IJHPCA (Submitted) (2011). 2514217d3b1eSJunchao Zhang - 2. - Gutierrez, Samuel K., et al. "Accommodating Thread-Level Heterogeneity in Coupled Parallel Applications." Parallel and Distributed Processing Symposium (IPDPS), 2017 IEEE International. IEEE, 2017. 2515217d3b1eSJunchao Zhang 25163ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog(), KSPGetPC(), PCGetFactor(), PCFactorGetMatrix() 251741c8de11SBarry Smith 251824b6179bSKris Buschelman M*/ 251924b6179bSKris Buschelman 2520ea799195SBarry Smith static PetscErrorCode MatFactorGetSolverType_mumps(Mat A,MatSolverType *type) 252135bd34faSBarry Smith { 252235bd34faSBarry Smith PetscFunctionBegin; 25232692d6eeSBarry Smith *type = MATSOLVERMUMPS; 252435bd34faSBarry Smith PetscFunctionReturn(0); 252535bd34faSBarry Smith } 252635bd34faSBarry Smith 2527bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI AIJ matrices */ 2528cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_aij_mumps(Mat A,MatFactorType ftype,Mat *F) 25292877fffaSHong Zhang { 25302877fffaSHong Zhang Mat B; 25312877fffaSHong Zhang PetscErrorCode ierr; 25322877fffaSHong Zhang Mat_MUMPS *mumps; 2533ace3abfcSBarry Smith PetscBool isSeqAIJ; 25342877fffaSHong Zhang 25352877fffaSHong Zhang PetscFunctionBegin; 25362877fffaSHong Zhang /* Create the factorization matrix */ 2537251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ);CHKERRQ(ierr); 2538ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 25392877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2540e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2541e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 25422877fffaSHong Zhang 2543b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 25442205254eSKarl Rupp 25452877fffaSHong Zhang B->ops->view = MatView_MUMPS; 254635bd34faSBarry Smith B->ops->getinfo = MatGetInfo_MUMPS; 25472205254eSKarl Rupp 25483ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 25495a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 25505a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2551bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2552bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2553bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2554bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2555ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2556ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2557ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2558ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 255989a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 25600e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 25616444a565SStefano Zampini 2562450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2563450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 2564d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 2565bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqaij; 2566bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpiaij; 2567746480a1SHong Zhang mumps->sym = 0; 2568dcd589f8SShri Abhyankar } else { 256967877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2570450b117fSShri Abhyankar B->factortype = MAT_FACTOR_CHOLESKY; 2571bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqsbaij; 2572bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpisbaij; 257359ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 257459ac8732SStefano Zampini mumps->sym = 2; 257559ac8732SStefano Zampini #else 25766fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 25776fdc2a6dSBarry Smith else mumps->sym = 2; 257859ac8732SStefano Zampini #endif 2579450b117fSShri Abhyankar } 25802877fffaSHong Zhang 258100c67f3bSHong Zhang /* set solvertype */ 258200c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 258300c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 258400c67f3bSHong Zhang 25852877fffaSHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2586e69c285eSBarry Smith B->data = (void*)mumps; 25872205254eSKarl Rupp 2588f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2589746480a1SHong Zhang 25902877fffaSHong Zhang *F = B; 25912877fffaSHong Zhang PetscFunctionReturn(0); 25922877fffaSHong Zhang } 25932877fffaSHong Zhang 2594bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI SBAIJ matrices */ 2595cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_sbaij_mumps(Mat A,MatFactorType ftype,Mat *F) 25962877fffaSHong Zhang { 25972877fffaSHong Zhang Mat B; 25982877fffaSHong Zhang PetscErrorCode ierr; 25992877fffaSHong Zhang Mat_MUMPS *mumps; 2600ace3abfcSBarry Smith PetscBool isSeqSBAIJ; 26012877fffaSHong Zhang 26022877fffaSHong Zhang PetscFunctionBegin; 2603ce94432eSBarry Smith if (ftype != MAT_FACTOR_CHOLESKY) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with MUMPS LU, use AIJ matrix"); 2604ce94432eSBarry Smith if (A->rmap->bs > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with block size > 1 with MUMPS Cholesky, use AIJ matrix instead"); 2605251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ);CHKERRQ(ierr); 26062877fffaSHong Zhang /* Create the factorization matrix */ 2607ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 26082877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2609e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2610e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2611e69c285eSBarry Smith 2612b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2613bccb9932SShri Abhyankar if (isSeqSBAIJ) { 261416ebf90aSShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_seqsbaij_seqsbaij; 2615dcd589f8SShri Abhyankar } else { 2616bccb9932SShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_mpisbaij_mpisbaij; 2617bccb9932SShri Abhyankar } 2618bccb9932SShri Abhyankar 2619e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 262067877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2621bccb9932SShri Abhyankar B->ops->view = MatView_MUMPS; 26222205254eSKarl Rupp 26233ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 26245a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 26255a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2626b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2627b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2628b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2629b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2630ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2631ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2632ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2633ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 263489a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2635eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 26362205254eSKarl Rupp 2637f4762488SHong Zhang B->factortype = MAT_FACTOR_CHOLESKY; 263859ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 263959ac8732SStefano Zampini mumps->sym = 2; 264059ac8732SStefano Zampini #else 26416fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 26426fdc2a6dSBarry Smith else mumps->sym = 2; 264359ac8732SStefano Zampini #endif 2644a214ac2aSShri Abhyankar 264500c67f3bSHong Zhang /* set solvertype */ 264600c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 264700c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 264800c67f3bSHong Zhang 2649f3c0ef26SHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2650e69c285eSBarry Smith B->data = (void*)mumps; 26512205254eSKarl Rupp 2652f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2653746480a1SHong Zhang 26542877fffaSHong Zhang *F = B; 26552877fffaSHong Zhang PetscFunctionReturn(0); 26562877fffaSHong Zhang } 265797969023SHong Zhang 2658cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_baij_mumps(Mat A,MatFactorType ftype,Mat *F) 265967877ebaSShri Abhyankar { 266067877ebaSShri Abhyankar Mat B; 266167877ebaSShri Abhyankar PetscErrorCode ierr; 266267877ebaSShri Abhyankar Mat_MUMPS *mumps; 2663ace3abfcSBarry Smith PetscBool isSeqBAIJ; 266467877ebaSShri Abhyankar 266567877ebaSShri Abhyankar PetscFunctionBegin; 266667877ebaSShri Abhyankar /* Create the factorization matrix */ 2667251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&isSeqBAIJ);CHKERRQ(ierr); 2668ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 266967877ebaSShri Abhyankar ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2670e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2671e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2672450b117fSShri Abhyankar 2673b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2674450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2675450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_BAIJMUMPS; 2676450b117fSShri Abhyankar B->factortype = MAT_FACTOR_LU; 2677bccb9932SShri Abhyankar if (isSeqBAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqbaij_seqaij; 2678bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpibaij_mpiaij; 2679746480a1SHong Zhang mumps->sym = 0; 2680f23aa3ddSBarry Smith } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc BAIJ matrices with MUMPS Cholesky, use SBAIJ or AIJ matrix instead\n"); 2681bccb9932SShri Abhyankar 2682e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 2683450b117fSShri Abhyankar B->ops->view = MatView_MUMPS; 26842205254eSKarl Rupp 26853ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 26865a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 26875a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2688bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2689bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2690bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2691bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2692ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2693ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2694ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2695ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 269689a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2697eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 2698450b117fSShri Abhyankar 269900c67f3bSHong Zhang /* set solvertype */ 270000c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 270100c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 270200c67f3bSHong Zhang 27037ee00b23SStefano Zampini B->ops->destroy = MatDestroy_MUMPS; 27047ee00b23SStefano Zampini B->data = (void*)mumps; 27057ee00b23SStefano Zampini 27067ee00b23SStefano Zampini ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 27077ee00b23SStefano Zampini 27087ee00b23SStefano Zampini *F = B; 27097ee00b23SStefano Zampini PetscFunctionReturn(0); 27107ee00b23SStefano Zampini } 27117ee00b23SStefano Zampini 27127ee00b23SStefano Zampini /* MatGetFactor for Seq and MPI SELL matrices */ 27137ee00b23SStefano Zampini static PetscErrorCode MatGetFactor_sell_mumps(Mat A,MatFactorType ftype,Mat *F) 27147ee00b23SStefano Zampini { 27157ee00b23SStefano Zampini Mat B; 27167ee00b23SStefano Zampini PetscErrorCode ierr; 27177ee00b23SStefano Zampini Mat_MUMPS *mumps; 27187ee00b23SStefano Zampini PetscBool isSeqSELL; 27197ee00b23SStefano Zampini 27207ee00b23SStefano Zampini PetscFunctionBegin; 27217ee00b23SStefano Zampini /* Create the factorization matrix */ 27227ee00b23SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSELL,&isSeqSELL);CHKERRQ(ierr); 27237ee00b23SStefano Zampini ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 27247ee00b23SStefano Zampini ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 27257ee00b23SStefano Zampini ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 27267ee00b23SStefano Zampini ierr = MatSetUp(B);CHKERRQ(ierr); 27277ee00b23SStefano Zampini 27287ee00b23SStefano Zampini ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 27297ee00b23SStefano Zampini 27307ee00b23SStefano Zampini B->ops->view = MatView_MUMPS; 27317ee00b23SStefano Zampini B->ops->getinfo = MatGetInfo_MUMPS; 27327ee00b23SStefano Zampini 27337ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 27347ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 27357ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 27367ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 27377ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 27387ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 27397ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 27407ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 27417ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 27427ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 27437ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 27447ee00b23SStefano Zampini 27457ee00b23SStefano Zampini if (ftype == MAT_FACTOR_LU) { 27467ee00b23SStefano Zampini B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 27477ee00b23SStefano Zampini B->factortype = MAT_FACTOR_LU; 27487ee00b23SStefano Zampini if (isSeqSELL) mumps->ConvertToTriples = MatConvertToTriples_seqsell_seqaij; 27497ee00b23SStefano Zampini else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 27507ee00b23SStefano Zampini mumps->sym = 0; 27517ee00b23SStefano Zampini } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 27527ee00b23SStefano Zampini 27537ee00b23SStefano Zampini /* set solvertype */ 27547ee00b23SStefano Zampini ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 27557ee00b23SStefano Zampini ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 27567ee00b23SStefano Zampini 2757450b117fSShri Abhyankar B->ops->destroy = MatDestroy_MUMPS; 2758e69c285eSBarry Smith B->data = (void*)mumps; 27592205254eSKarl Rupp 2760f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2761746480a1SHong Zhang 2762450b117fSShri Abhyankar *F = B; 2763450b117fSShri Abhyankar PetscFunctionReturn(0); 2764450b117fSShri Abhyankar } 276542c9c57cSBarry Smith 27663ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_MUMPS(void) 276742c9c57cSBarry Smith { 276842c9c57cSBarry Smith PetscErrorCode ierr; 276942c9c57cSBarry Smith 277042c9c57cSBarry Smith PetscFunctionBegin; 27713ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27723ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27733ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27743ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27753ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPISBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 27763ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27773ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27783ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27793ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27803ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 27817ee00b23SStefano Zampini ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSELL,MAT_FACTOR_LU,MatGetFactor_sell_mumps);CHKERRQ(ierr); 278242c9c57cSBarry Smith PetscFunctionReturn(0); 278342c9c57cSBarry Smith } 278442c9c57cSBarry Smith 2785