11c2a3de1SBarry Smith 2397b6df1SKris Buschelman /* 3c2b5dc30SHong Zhang Provides an interface to the MUMPS sparse solver 4397b6df1SKris Buschelman */ 551d5961aSHong Zhang 6c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> /*I "petscmat.h" I*/ 7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h> 87ee00b23SStefano Zampini #include <../src/mat/impls/sell/mpi/mpisell.h> 9397b6df1SKris Buschelman 10397b6df1SKris Buschelman EXTERN_C_BEGIN 11397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 122907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 132907cef9SHong Zhang #include <cmumps_c.h> 142907cef9SHong Zhang #else 15c6db04a5SJed Brown #include <zmumps_c.h> 162907cef9SHong Zhang #endif 172907cef9SHong Zhang #else 182907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 192907cef9SHong Zhang #include <smumps_c.h> 20397b6df1SKris Buschelman #else 21c6db04a5SJed Brown #include <dmumps_c.h> 22397b6df1SKris Buschelman #endif 232907cef9SHong Zhang #endif 24397b6df1SKris Buschelman EXTERN_C_END 25397b6df1SKris Buschelman #define JOB_INIT -1 263d472b54SHong Zhang #define JOB_FACTSYMBOLIC 1 273d472b54SHong Zhang #define JOB_FACTNUMERIC 2 283d472b54SHong Zhang #define JOB_SOLVE 3 29397b6df1SKris Buschelman #define JOB_END -2 303d472b54SHong Zhang 312907cef9SHong Zhang /* calls to MUMPS */ 322907cef9SHong Zhang #if defined(PETSC_USE_COMPLEX) 332907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 343ab56b82SJunchao Zhang #define MUMPS_c cmumps_c 352907cef9SHong Zhang #else 363ab56b82SJunchao Zhang #define MUMPS_c zmumps_c 372907cef9SHong Zhang #endif 382907cef9SHong Zhang #else 392907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 403ab56b82SJunchao Zhang #define MUMPS_c smumps_c 412907cef9SHong Zhang #else 423ab56b82SJunchao Zhang #define MUMPS_c dmumps_c 432907cef9SHong Zhang #endif 442907cef9SHong Zhang #endif 452907cef9SHong Zhang 46217d3b1eSJunchao Zhang /* if using PETSc OpenMP support, we only call MUMPS on master ranks. Before/after the call, we change/restore CPUs the master ranks can run on */ 473ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 483ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 493ab56b82SJunchao Zhang do { \ 503ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { \ 513ab56b82SJunchao Zhang if (mumps->is_omp_master) { \ 523ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterBegin(mumps->omp_ctrl);CHKERRQ(ierr); \ 533ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 543ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterEnd(mumps->omp_ctrl);CHKERRQ(ierr); \ 553ab56b82SJunchao Zhang } \ 563ab56b82SJunchao Zhang ierr = PetscOmpCtrlBarrier(mumps->omp_ctrl);CHKERRQ(ierr); \ 573ab56b82SJunchao Zhang } else { \ 583ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 593ab56b82SJunchao Zhang } \ 603ab56b82SJunchao Zhang } while(0) 613ab56b82SJunchao Zhang #else 623ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 633ab56b82SJunchao Zhang do { MUMPS_c(&mumps->id); } while (0) 643ab56b82SJunchao Zhang #endif 653ab56b82SJunchao Zhang 66940cd9d6SSatish Balay /* declare MumpsScalar */ 67940cd9d6SSatish Balay #if defined(PETSC_USE_COMPLEX) 68940cd9d6SSatish Balay #if defined(PETSC_USE_REAL_SINGLE) 69940cd9d6SSatish Balay #define MumpsScalar mumps_complex 70940cd9d6SSatish Balay #else 71940cd9d6SSatish Balay #define MumpsScalar mumps_double_complex 72940cd9d6SSatish Balay #endif 73940cd9d6SSatish Balay #else 74940cd9d6SSatish Balay #define MumpsScalar PetscScalar 75940cd9d6SSatish Balay #endif 763d472b54SHong Zhang 77397b6df1SKris Buschelman /* macros s.t. indices match MUMPS documentation */ 78397b6df1SKris Buschelman #define ICNTL(I) icntl[(I)-1] 79397b6df1SKris Buschelman #define CNTL(I) cntl[(I)-1] 80397b6df1SKris Buschelman #define INFOG(I) infog[(I)-1] 81a7aca84bSHong Zhang #define INFO(I) info[(I)-1] 82397b6df1SKris Buschelman #define RINFOG(I) rinfog[(I)-1] 83adc1d99fSHong Zhang #define RINFO(I) rinfo[(I)-1] 84397b6df1SKris Buschelman 85397b6df1SKris Buschelman typedef struct { 86397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 872907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 882907cef9SHong Zhang CMUMPS_STRUC_C id; 892907cef9SHong Zhang #else 90397b6df1SKris Buschelman ZMUMPS_STRUC_C id; 912907cef9SHong Zhang #endif 922907cef9SHong Zhang #else 932907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 942907cef9SHong Zhang SMUMPS_STRUC_C id; 95397b6df1SKris Buschelman #else 96397b6df1SKris Buschelman DMUMPS_STRUC_C id; 97397b6df1SKris Buschelman #endif 982907cef9SHong Zhang #endif 992907cef9SHong Zhang 100397b6df1SKris Buschelman MatStructure matstruc; 1012d4298aeSJunchao Zhang PetscMPIInt myid,petsc_size; 102a5e57a09SHong Zhang PetscInt *irn,*jcn,nz,sym; 103397b6df1SKris Buschelman PetscScalar *val; 1042d4298aeSJunchao Zhang MPI_Comm mumps_comm; 105a5e57a09SHong Zhang PetscInt ICNTL9_pre; /* check if ICNTL(9) is changed from previous MatSolve */ 106801fbe65SHong Zhang VecScatter scat_rhs, scat_sol; /* used by MatSolve() */ 107801fbe65SHong Zhang Vec b_seq,x_seq; 108b34f08ffSHong Zhang PetscInt ninfo,*info; /* display INFO */ 109b5fa320bSStefano Zampini PetscInt sizeredrhs; 11059ac8732SStefano Zampini PetscScalar *schur_sol; 11159ac8732SStefano Zampini PetscInt schur_sizesol; 1122205254eSKarl Rupp 1133ab56b82SJunchao Zhang PetscBool use_petsc_omp_support; 1143ab56b82SJunchao Zhang PetscOmpCtrl omp_ctrl; /* an OpenMP controler that blocked processes will release their CPU (MPI_Barrier does not have this guarantee) */ 1153ab56b82SJunchao Zhang MPI_Comm petsc_comm,omp_comm; /* petsc_comm is petsc matrix's comm */ 1163ab56b82SJunchao Zhang PetscMPIInt mpinz; /* on master rank, nz = sum(mpinz) over omp_comm; on other ranks, mpinz = nz*/ 1173ab56b82SJunchao Zhang PetscMPIInt omp_comm_size; 1183ab56b82SJunchao Zhang PetscBool is_omp_master; /* is this rank the master of omp_comm */ 1193ab56b82SJunchao Zhang PetscMPIInt *recvcount,*displs; 1203ab56b82SJunchao Zhang 121bccb9932SShri Abhyankar PetscErrorCode (*ConvertToTriples)(Mat, int, MatReuse, int*, int**, int**, PetscScalar**); 122f0c56d0fSKris Buschelman } Mat_MUMPS; 123f0c56d0fSKris Buschelman 12409573ac7SBarry Smith extern PetscErrorCode MatDuplicate_MUMPS(Mat,MatDuplicateOption,Mat*); 125b24902e0SBarry Smith 12659ac8732SStefano Zampini static PetscErrorCode MatMumpsResetSchur_Private(Mat_MUMPS* mumps) 127b5fa320bSStefano Zampini { 128b5fa320bSStefano Zampini PetscErrorCode ierr; 129b5fa320bSStefano Zampini 130b5fa320bSStefano Zampini PetscFunctionBegin; 13159ac8732SStefano Zampini ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr); 13259ac8732SStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 13359ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 13459ac8732SStefano Zampini mumps->id.size_schur = 0; 135b3cb21ddSStefano Zampini mumps->id.schur_lld = 0; 13659ac8732SStefano Zampini mumps->id.ICNTL(19) = 0; 13759ac8732SStefano Zampini PetscFunctionReturn(0); 13859ac8732SStefano Zampini } 13959ac8732SStefano Zampini 140b3cb21ddSStefano Zampini /* solve with rhs in mumps->id.redrhs and return in the same location */ 141b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsSolveSchur_Private(Mat F) 14259ac8732SStefano Zampini { 143b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 144b3cb21ddSStefano Zampini Mat S,B,X; 145b3cb21ddSStefano Zampini MatFactorSchurStatus schurstatus; 146b3cb21ddSStefano Zampini PetscInt sizesol; 14759ac8732SStefano Zampini PetscErrorCode ierr; 14859ac8732SStefano Zampini 14959ac8732SStefano Zampini PetscFunctionBegin; 150b3cb21ddSStefano Zampini ierr = MatFactorFactorizeSchurComplement(F);CHKERRQ(ierr); 151b3cb21ddSStefano Zampini ierr = MatFactorGetSchurComplement(F,&S,&schurstatus);CHKERRQ(ierr); 152b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&B);CHKERRQ(ierr); 153b3cb21ddSStefano Zampini switch (schurstatus) { 154b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_FACTORED: 155b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&X);CHKERRQ(ierr); 156b3cb21ddSStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 157b3cb21ddSStefano Zampini ierr = MatMatSolveTranspose(S,B,X);CHKERRQ(ierr); 15859ac8732SStefano Zampini } else { 159b3cb21ddSStefano Zampini ierr = MatMatSolve(S,B,X);CHKERRQ(ierr); 16059ac8732SStefano Zampini } 161b3cb21ddSStefano Zampini break; 162b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_INVERTED: 163b3cb21ddSStefano Zampini sizesol = mumps->id.nrhs*mumps->id.size_schur; 16459ac8732SStefano Zampini if (!mumps->schur_sol || sizesol > mumps->schur_sizesol) { 16559ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 16659ac8732SStefano Zampini ierr = PetscMalloc1(sizesol,&mumps->schur_sol);CHKERRQ(ierr); 16759ac8732SStefano Zampini mumps->schur_sizesol = sizesol; 168b5fa320bSStefano Zampini } 169b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,mumps->schur_sol,&X);CHKERRQ(ierr); 17059ac8732SStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 171b3cb21ddSStefano Zampini ierr = MatTransposeMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 172b5fa320bSStefano Zampini } else { 173b3cb21ddSStefano Zampini ierr = MatMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 174b5fa320bSStefano Zampini } 175b3cb21ddSStefano Zampini ierr = MatCopy(X,B,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 176b3cb21ddSStefano Zampini break; 177b3cb21ddSStefano Zampini default: 178b3cb21ddSStefano Zampini SETERRQ1(PetscObjectComm((PetscObject)F),PETSC_ERR_SUP,"Unhandled MatFactorSchurStatus %D",F->schur_status); 179b3cb21ddSStefano Zampini break; 18059ac8732SStefano Zampini } 181b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,&S,schurstatus);CHKERRQ(ierr); 182b3cb21ddSStefano Zampini ierr = MatDestroy(&B);CHKERRQ(ierr); 183b3cb21ddSStefano Zampini ierr = MatDestroy(&X);CHKERRQ(ierr); 184b5fa320bSStefano Zampini PetscFunctionReturn(0); 185b5fa320bSStefano Zampini } 186b5fa320bSStefano Zampini 187b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsHandleSchur_Private(Mat F, PetscBool expansion) 188b5fa320bSStefano Zampini { 189b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 190b5fa320bSStefano Zampini PetscErrorCode ierr; 191b5fa320bSStefano Zampini 192b5fa320bSStefano Zampini PetscFunctionBegin; 193b5fa320bSStefano Zampini if (!mumps->id.ICNTL(19)) { /* do nothing when Schur complement has not been computed */ 194b5fa320bSStefano Zampini PetscFunctionReturn(0); 195b5fa320bSStefano Zampini } 196b8f61ee1SStefano Zampini if (!expansion) { /* prepare for the condensation step */ 197b5fa320bSStefano Zampini PetscInt sizeredrhs = mumps->id.nrhs*mumps->id.size_schur; 198b5fa320bSStefano Zampini /* allocate MUMPS internal array to store reduced right-hand sides */ 199b5fa320bSStefano Zampini if (!mumps->id.redrhs || sizeredrhs > mumps->sizeredrhs) { 200b5fa320bSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 201b5fa320bSStefano Zampini mumps->id.lredrhs = mumps->id.size_schur; 202b5fa320bSStefano Zampini ierr = PetscMalloc1(mumps->id.nrhs*mumps->id.lredrhs,&mumps->id.redrhs);CHKERRQ(ierr); 203b5fa320bSStefano Zampini mumps->sizeredrhs = mumps->id.nrhs*mumps->id.lredrhs; 204b5fa320bSStefano Zampini } 205b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 1; /* condensation phase */ 206b5fa320bSStefano Zampini } else { /* prepare for the expansion step */ 207b8f61ee1SStefano Zampini /* solve Schur complement (this has to be done by the MUMPS user, so basically us) */ 208b3cb21ddSStefano Zampini ierr = MatMumpsSolveSchur_Private(F);CHKERRQ(ierr); 209b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 2; /* expansion phase */ 2103ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 211b5fa320bSStefano Zampini if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 212b5fa320bSStefano Zampini /* restore defaults */ 213b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 214d3d598ffSStefano Zampini /* free MUMPS internal array for redrhs if we have solved for multiple rhs in order to save memory space */ 215d3d598ffSStefano Zampini if (mumps->id.nrhs > 1) { 216d3d598ffSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 217d3d598ffSStefano Zampini mumps->id.lredrhs = 0; 218d3d598ffSStefano Zampini mumps->sizeredrhs = 0; 219d3d598ffSStefano Zampini } 220b5fa320bSStefano Zampini } 221b5fa320bSStefano Zampini PetscFunctionReturn(0); 222b5fa320bSStefano Zampini } 223b5fa320bSStefano Zampini 224397b6df1SKris Buschelman /* 225d341cd04SHong Zhang MatConvertToTriples_A_B - convert Petsc matrix to triples: row[nz], col[nz], val[nz] 226d341cd04SHong Zhang 227397b6df1SKris Buschelman input: 22875480915SPierre Jolivet A - matrix in aij,baij or sbaij format 229397b6df1SKris Buschelman shift - 0: C style output triple; 1: Fortran style output triple. 230bccb9932SShri Abhyankar reuse - MAT_INITIAL_MATRIX: spaces are allocated and values are set for the triple 231bccb9932SShri Abhyankar MAT_REUSE_MATRIX: only the values in v array are updated 232397b6df1SKris Buschelman output: 233397b6df1SKris Buschelman nnz - dim of r, c, and v (number of local nonzero entries of A) 234397b6df1SKris Buschelman r, c, v - row and col index, matrix values (matrix triples) 235eb9baa12SBarry Smith 236eb9baa12SBarry Smith The returned values r, c, and sometimes v are obtained in a single PetscMalloc(). Then in MatDestroy_MUMPS() it is 2377ee00b23SStefano Zampini freed with PetscFree(mumps->irn); This is not ideal code, the fact that v is ONLY sometimes part of mumps->irn means 238eb9baa12SBarry Smith that the PetscMalloc() cannot easily be replaced with a PetscMalloc3(). 239eb9baa12SBarry Smith 240397b6df1SKris Buschelman */ 24116ebf90aSShri Abhyankar 242bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 243b24902e0SBarry Smith { 244185f6596SHong Zhang const PetscInt *ai,*aj,*ajj,M=A->rmap->n; 24567877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 246dfbe8321SBarry Smith PetscErrorCode ierr; 247c1490034SHong Zhang PetscInt *row,*col; 24816ebf90aSShri Abhyankar Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 249397b6df1SKris Buschelman 250397b6df1SKris Buschelman PetscFunctionBegin; 25116ebf90aSShri Abhyankar *v=aa->a; 252bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 2532205254eSKarl Rupp nz = aa->nz; 2542205254eSKarl Rupp ai = aa->i; 2552205254eSKarl Rupp aj = aa->j; 25616ebf90aSShri Abhyankar *nnz = nz; 257785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 258185f6596SHong Zhang col = row + nz; 259185f6596SHong Zhang 26016ebf90aSShri Abhyankar nz = 0; 26116ebf90aSShri Abhyankar for (i=0; i<M; i++) { 26216ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 26367877ebaSShri Abhyankar ajj = aj + ai[i]; 26467877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 26567877ebaSShri Abhyankar row[nz] = i+shift; col[nz++] = ajj[j] + shift; 26616ebf90aSShri Abhyankar } 26716ebf90aSShri Abhyankar } 26816ebf90aSShri Abhyankar *r = row; *c = col; 26916ebf90aSShri Abhyankar } 27016ebf90aSShri Abhyankar PetscFunctionReturn(0); 27116ebf90aSShri Abhyankar } 272397b6df1SKris Buschelman 2737ee00b23SStefano Zampini PetscErrorCode MatConvertToTriples_seqsell_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 2747ee00b23SStefano Zampini { 2757ee00b23SStefano Zampini Mat_SeqSELL *a=(Mat_SeqSELL*)A->data; 2767ee00b23SStefano Zampini PetscInt *ptr; 2777ee00b23SStefano Zampini 2787ee00b23SStefano Zampini PetscFunctionBegin; 2797ee00b23SStefano Zampini *v = a->val; 2807ee00b23SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 2817ee00b23SStefano Zampini PetscInt nz,i,j,row; 2827ee00b23SStefano Zampini PetscErrorCode ierr; 2837ee00b23SStefano Zampini 2847ee00b23SStefano Zampini nz = a->sliidx[a->totalslices]; 2857ee00b23SStefano Zampini *nnz = nz; 2867ee00b23SStefano Zampini ierr = PetscMalloc1(2*nz, &ptr);CHKERRQ(ierr); 2877ee00b23SStefano Zampini *r = ptr; 2887ee00b23SStefano Zampini *c = ptr + nz; 2897ee00b23SStefano Zampini 2907ee00b23SStefano Zampini for (i=0; i<a->totalslices; i++) { 2917ee00b23SStefano Zampini for (j=a->sliidx[i],row=0; j<a->sliidx[i+1]; j++,row=((row+1)&0x07)) { 2927ee00b23SStefano Zampini *ptr++ = 8*i + row + shift; 2937ee00b23SStefano Zampini } 2947ee00b23SStefano Zampini } 2957ee00b23SStefano Zampini for (i=0;i<nz;i++) *ptr++ = a->colidx[i] + shift; 2967ee00b23SStefano Zampini } 2977ee00b23SStefano Zampini PetscFunctionReturn(0); 2987ee00b23SStefano Zampini } 2997ee00b23SStefano Zampini 300bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqbaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 30167877ebaSShri Abhyankar { 30267877ebaSShri Abhyankar Mat_SeqBAIJ *aa=(Mat_SeqBAIJ*)A->data; 30333d57670SJed Brown const PetscInt *ai,*aj,*ajj,bs2 = aa->bs2; 30433d57670SJed Brown PetscInt bs,M,nz,idx=0,rnz,i,j,k,m; 30567877ebaSShri Abhyankar PetscErrorCode ierr; 30667877ebaSShri Abhyankar PetscInt *row,*col; 30767877ebaSShri Abhyankar 30867877ebaSShri Abhyankar PetscFunctionBegin; 30933d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 31033d57670SJed Brown M = A->rmap->N/bs; 311cf3759fdSShri Abhyankar *v = aa->a; 312bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 313cf3759fdSShri Abhyankar ai = aa->i; aj = aa->j; 31467877ebaSShri Abhyankar nz = bs2*aa->nz; 31567877ebaSShri Abhyankar *nnz = nz; 316785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 317185f6596SHong Zhang col = row + nz; 318185f6596SHong Zhang 31967877ebaSShri Abhyankar for (i=0; i<M; i++) { 32067877ebaSShri Abhyankar ajj = aj + ai[i]; 32167877ebaSShri Abhyankar rnz = ai[i+1] - ai[i]; 32267877ebaSShri Abhyankar for (k=0; k<rnz; k++) { 32367877ebaSShri Abhyankar for (j=0; j<bs; j++) { 32467877ebaSShri Abhyankar for (m=0; m<bs; m++) { 32567877ebaSShri Abhyankar row[idx] = i*bs + m + shift; 326cf3759fdSShri Abhyankar col[idx++] = bs*(ajj[k]) + j + shift; 32767877ebaSShri Abhyankar } 32867877ebaSShri Abhyankar } 32967877ebaSShri Abhyankar } 33067877ebaSShri Abhyankar } 331cf3759fdSShri Abhyankar *r = row; *c = col; 33267877ebaSShri Abhyankar } 33367877ebaSShri Abhyankar PetscFunctionReturn(0); 33467877ebaSShri Abhyankar } 33567877ebaSShri Abhyankar 336bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqsbaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 33716ebf90aSShri Abhyankar { 33875480915SPierre Jolivet const PetscInt *ai, *aj,*ajj; 33975480915SPierre Jolivet PetscInt nz,rnz,i,j,k,m,bs; 34016ebf90aSShri Abhyankar PetscErrorCode ierr; 34116ebf90aSShri Abhyankar PetscInt *row,*col; 34275480915SPierre Jolivet PetscScalar *val; 34316ebf90aSShri Abhyankar Mat_SeqSBAIJ *aa=(Mat_SeqSBAIJ*)A->data; 34475480915SPierre Jolivet const PetscInt bs2=aa->bs2,mbs=aa->mbs; 34538548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 34638548759SBarry Smith PetscBool hermitian; 34738548759SBarry Smith #endif 34816ebf90aSShri Abhyankar 34916ebf90aSShri Abhyankar PetscFunctionBegin; 35038548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 35138548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 35238548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 35338548759SBarry Smith #endif 3542205254eSKarl Rupp ai = aa->i; 3552205254eSKarl Rupp aj = aa->j; 35675480915SPierre Jolivet ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 35775480915SPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) { 35875480915SPierre Jolivet nz = aa->nz; 359*a81fe166SPierre Jolivet ierr = PetscMalloc((2*bs2*nz*sizeof(PetscInt)+(bs>1?bs2*nz*sizeof(PetscScalar):0)), &row);CHKERRQ(ierr); 36075480915SPierre Jolivet col = row + bs2*nz; 361*a81fe166SPierre Jolivet if (bs>1) 36275480915SPierre Jolivet val = (PetscScalar*)(col + bs2*nz); 363*a81fe166SPierre Jolivet else 364*a81fe166SPierre Jolivet val = aa->a; 36575480915SPierre Jolivet 36675480915SPierre Jolivet *r = row; *c = col; *v = val; 36775480915SPierre Jolivet } else { 36875480915SPierre Jolivet row = *r; col = *c; val = *v; 36975480915SPierre Jolivet } 370185f6596SHong Zhang 37116ebf90aSShri Abhyankar nz = 0; 372*a81fe166SPierre Jolivet if (bs>1) { 37375480915SPierre Jolivet for (i=0; i<mbs; i++) { 37416ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 37567877ebaSShri Abhyankar ajj = aj + ai[i]; 37675480915SPierre Jolivet for (j=0; j<rnz; j++) { 37775480915SPierre Jolivet for (k=0; k<bs; k++) { 37875480915SPierre Jolivet for (m=0; m<bs; m++) { 37975480915SPierre Jolivet if (ajj[j]>i || m>=k) { 38075480915SPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) { 38175480915SPierre Jolivet row[nz] = i*bs + m + shift; 38275480915SPierre Jolivet col[nz] = ajj[j]*bs + k + shift; 38375480915SPierre Jolivet } 38475480915SPierre Jolivet val[nz++] = aa->a[(ai[i]+j)*bs2 + m + k*bs]; 38575480915SPierre Jolivet } 38675480915SPierre Jolivet } 38775480915SPierre Jolivet } 38875480915SPierre Jolivet } 38975480915SPierre Jolivet } 390*a81fe166SPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) { 391*a81fe166SPierre Jolivet for (i=0; i<mbs; i++) { 392*a81fe166SPierre Jolivet rnz = ai[i+1] - ai[i]; 393*a81fe166SPierre Jolivet ajj = aj + ai[i]; 394*a81fe166SPierre Jolivet for (j=0; j<rnz; j++) { 395*a81fe166SPierre Jolivet row[nz] = i+shift; col[nz++] = ajj[j] + shift; 396*a81fe166SPierre Jolivet } 397*a81fe166SPierre Jolivet } 398*a81fe166SPierre Jolivet if (nz != aa->nz) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Different numbers of nonzeros %D != %D",nz,aa->nz); 39975480915SPierre Jolivet } 40075480915SPierre Jolivet *nnz = nz; 40116ebf90aSShri Abhyankar PetscFunctionReturn(0); 40216ebf90aSShri Abhyankar } 40316ebf90aSShri Abhyankar 404bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 40516ebf90aSShri Abhyankar { 40667877ebaSShri Abhyankar const PetscInt *ai,*aj,*ajj,*adiag,M=A->rmap->n; 40767877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 40867877ebaSShri Abhyankar const PetscScalar *av,*v1; 40916ebf90aSShri Abhyankar PetscScalar *val; 41016ebf90aSShri Abhyankar PetscErrorCode ierr; 41116ebf90aSShri Abhyankar PetscInt *row,*col; 412829b1710SHong Zhang Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 41329b521d4Sstefano_zampini PetscBool missing; 41438548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 41538548759SBarry Smith PetscBool hermitian; 41638548759SBarry Smith #endif 41716ebf90aSShri Abhyankar 41816ebf90aSShri Abhyankar PetscFunctionBegin; 41938548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 42038548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 42138548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 42238548759SBarry Smith #endif 42316ebf90aSShri Abhyankar ai = aa->i; aj = aa->j; av = aa->a; 42416ebf90aSShri Abhyankar adiag = aa->diag; 42529b521d4Sstefano_zampini ierr = MatMissingDiagonal_SeqAIJ(A,&missing,&i);CHKERRQ(ierr); 426bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 4277ee00b23SStefano Zampini /* count nz in the upper triangular part of A */ 428829b1710SHong Zhang nz = 0; 42929b521d4Sstefano_zampini if (missing) { 43029b521d4Sstefano_zampini for (i=0; i<M; i++) { 43129b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 43229b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 43329b521d4Sstefano_zampini if (aj[j] < i) continue; 43429b521d4Sstefano_zampini nz++; 43529b521d4Sstefano_zampini } 43629b521d4Sstefano_zampini } else { 43729b521d4Sstefano_zampini nz += ai[i+1] - adiag[i]; 43829b521d4Sstefano_zampini } 43929b521d4Sstefano_zampini } 44029b521d4Sstefano_zampini } else { 441829b1710SHong Zhang for (i=0; i<M; i++) nz += ai[i+1] - adiag[i]; 44229b521d4Sstefano_zampini } 44316ebf90aSShri Abhyankar *nnz = nz; 444829b1710SHong Zhang 445185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 446185f6596SHong Zhang col = row + nz; 447185f6596SHong Zhang val = (PetscScalar*)(col + nz); 448185f6596SHong Zhang 44916ebf90aSShri Abhyankar nz = 0; 45029b521d4Sstefano_zampini if (missing) { 45129b521d4Sstefano_zampini for (i=0; i<M; i++) { 45229b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 45329b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 45429b521d4Sstefano_zampini if (aj[j] < i) continue; 45529b521d4Sstefano_zampini row[nz] = i+shift; 45629b521d4Sstefano_zampini col[nz] = aj[j]+shift; 45729b521d4Sstefano_zampini val[nz] = av[j]; 45829b521d4Sstefano_zampini nz++; 45929b521d4Sstefano_zampini } 46029b521d4Sstefano_zampini } else { 46129b521d4Sstefano_zampini rnz = ai[i+1] - adiag[i]; 46229b521d4Sstefano_zampini ajj = aj + adiag[i]; 46329b521d4Sstefano_zampini v1 = av + adiag[i]; 46429b521d4Sstefano_zampini for (j=0; j<rnz; j++) { 46529b521d4Sstefano_zampini row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 46629b521d4Sstefano_zampini } 46729b521d4Sstefano_zampini } 46829b521d4Sstefano_zampini } 46929b521d4Sstefano_zampini } else { 47016ebf90aSShri Abhyankar for (i=0; i<M; i++) { 47116ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 47267877ebaSShri Abhyankar ajj = aj + adiag[i]; 473cf3759fdSShri Abhyankar v1 = av + adiag[i]; 47467877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 47567877ebaSShri Abhyankar row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 47616ebf90aSShri Abhyankar } 47716ebf90aSShri Abhyankar } 47829b521d4Sstefano_zampini } 47916ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 480397b6df1SKris Buschelman } else { 48116ebf90aSShri Abhyankar nz = 0; val = *v; 48229b521d4Sstefano_zampini if (missing) { 48316ebf90aSShri Abhyankar for (i=0; i <M; i++) { 48429b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 48529b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 48629b521d4Sstefano_zampini if (aj[j] < i) continue; 48729b521d4Sstefano_zampini val[nz++] = av[j]; 48829b521d4Sstefano_zampini } 48929b521d4Sstefano_zampini } else { 49016ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 49167877ebaSShri Abhyankar v1 = av + adiag[i]; 49267877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 49367877ebaSShri Abhyankar val[nz++] = v1[j]; 49416ebf90aSShri Abhyankar } 49516ebf90aSShri Abhyankar } 49616ebf90aSShri Abhyankar } 49729b521d4Sstefano_zampini } else { 49816ebf90aSShri Abhyankar for (i=0; i <M; i++) { 49916ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 50016ebf90aSShri Abhyankar v1 = av + adiag[i]; 50116ebf90aSShri Abhyankar for (j=0; j<rnz; j++) { 50216ebf90aSShri Abhyankar val[nz++] = v1[j]; 50316ebf90aSShri Abhyankar } 50416ebf90aSShri Abhyankar } 50516ebf90aSShri Abhyankar } 50629b521d4Sstefano_zampini } 50716ebf90aSShri Abhyankar PetscFunctionReturn(0); 50816ebf90aSShri Abhyankar } 50916ebf90aSShri Abhyankar 510bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpisbaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 51116ebf90aSShri Abhyankar { 51216ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 51316ebf90aSShri Abhyankar PetscErrorCode ierr; 51416ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 51516ebf90aSShri Abhyankar PetscInt *row,*col; 51616ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 51716ebf90aSShri Abhyankar PetscScalar *val; 518397b6df1SKris Buschelman Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)A->data; 519397b6df1SKris Buschelman Mat_SeqSBAIJ *aa = (Mat_SeqSBAIJ*)(mat->A)->data; 520397b6df1SKris Buschelman Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 52138548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 52238548759SBarry Smith PetscBool hermitian; 52338548759SBarry Smith #endif 52416ebf90aSShri Abhyankar 52516ebf90aSShri Abhyankar PetscFunctionBegin; 52638548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 52738548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 52838548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 52938548759SBarry Smith #endif 53038548759SBarry Smith rstart = A->rmap->rstart; 53138548759SBarry Smith ai = aa->i; 53238548759SBarry Smith aj = aa->j; 53338548759SBarry Smith bi = bb->i; 53438548759SBarry Smith bj = bb->j; 53538548759SBarry Smith av = aa->a; 53638548759SBarry Smith bv = bb->a; 537397b6df1SKris Buschelman 5382205254eSKarl Rupp garray = mat->garray; 5392205254eSKarl Rupp 540bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 54116ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 54216ebf90aSShri Abhyankar *nnz = nz; 543185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 544185f6596SHong Zhang col = row + nz; 545185f6596SHong Zhang val = (PetscScalar*)(col + nz); 546185f6596SHong Zhang 547397b6df1SKris Buschelman *r = row; *c = col; *v = val; 548397b6df1SKris Buschelman } else { 549397b6df1SKris Buschelman row = *r; col = *c; val = *v; 550397b6df1SKris Buschelman } 551397b6df1SKris Buschelman 552028e57e8SHong Zhang jj = 0; irow = rstart; 553397b6df1SKris Buschelman for (i=0; i<m; i++) { 554397b6df1SKris Buschelman ajj = aj + ai[i]; /* ptr to the beginning of this row */ 555397b6df1SKris Buschelman countA = ai[i+1] - ai[i]; 556397b6df1SKris Buschelman countB = bi[i+1] - bi[i]; 557397b6df1SKris Buschelman bjj = bj + bi[i]; 55816ebf90aSShri Abhyankar v1 = av + ai[i]; 55916ebf90aSShri Abhyankar v2 = bv + bi[i]; 560397b6df1SKris Buschelman 561397b6df1SKris Buschelman /* A-part */ 562397b6df1SKris Buschelman for (j=0; j<countA; j++) { 563bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 564397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 565397b6df1SKris Buschelman } 56616ebf90aSShri Abhyankar val[jj++] = v1[j]; 567397b6df1SKris Buschelman } 56816ebf90aSShri Abhyankar 56916ebf90aSShri Abhyankar /* B-part */ 57016ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 571bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 572397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 573397b6df1SKris Buschelman } 57416ebf90aSShri Abhyankar val[jj++] = v2[j]; 57516ebf90aSShri Abhyankar } 57616ebf90aSShri Abhyankar irow++; 57716ebf90aSShri Abhyankar } 57816ebf90aSShri Abhyankar PetscFunctionReturn(0); 57916ebf90aSShri Abhyankar } 58016ebf90aSShri Abhyankar 581bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 58216ebf90aSShri Abhyankar { 58316ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 58416ebf90aSShri Abhyankar PetscErrorCode ierr; 58516ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 58616ebf90aSShri Abhyankar PetscInt *row,*col; 58716ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 58816ebf90aSShri Abhyankar PetscScalar *val; 58916ebf90aSShri Abhyankar Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 59016ebf90aSShri Abhyankar Mat_SeqAIJ *aa = (Mat_SeqAIJ*)(mat->A)->data; 59116ebf90aSShri Abhyankar Mat_SeqAIJ *bb = (Mat_SeqAIJ*)(mat->B)->data; 59216ebf90aSShri Abhyankar 59316ebf90aSShri Abhyankar PetscFunctionBegin; 59438548759SBarry Smith rstart = A->rmap->rstart; 59538548759SBarry Smith ai = aa->i; 59638548759SBarry Smith aj = aa->j; 59738548759SBarry Smith bi = bb->i; 59838548759SBarry Smith bj = bb->j; 59938548759SBarry Smith av = aa->a; 60038548759SBarry Smith bv = bb->a; 60116ebf90aSShri Abhyankar 6022205254eSKarl Rupp garray = mat->garray; 6032205254eSKarl Rupp 604bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 60516ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 60616ebf90aSShri Abhyankar *nnz = nz; 607185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 608185f6596SHong Zhang col = row + nz; 609185f6596SHong Zhang val = (PetscScalar*)(col + nz); 610185f6596SHong Zhang 61116ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 61216ebf90aSShri Abhyankar } else { 61316ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 61416ebf90aSShri Abhyankar } 61516ebf90aSShri Abhyankar 61616ebf90aSShri Abhyankar jj = 0; irow = rstart; 61716ebf90aSShri Abhyankar for (i=0; i<m; i++) { 61816ebf90aSShri Abhyankar ajj = aj + ai[i]; /* ptr to the beginning of this row */ 61916ebf90aSShri Abhyankar countA = ai[i+1] - ai[i]; 62016ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 62116ebf90aSShri Abhyankar bjj = bj + bi[i]; 62216ebf90aSShri Abhyankar v1 = av + ai[i]; 62316ebf90aSShri Abhyankar v2 = bv + bi[i]; 62416ebf90aSShri Abhyankar 62516ebf90aSShri Abhyankar /* A-part */ 62616ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 627bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 62816ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 62916ebf90aSShri Abhyankar } 63016ebf90aSShri Abhyankar val[jj++] = v1[j]; 63116ebf90aSShri Abhyankar } 63216ebf90aSShri Abhyankar 63316ebf90aSShri Abhyankar /* B-part */ 63416ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 635bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 63616ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 63716ebf90aSShri Abhyankar } 63816ebf90aSShri Abhyankar val[jj++] = v2[j]; 63916ebf90aSShri Abhyankar } 64016ebf90aSShri Abhyankar irow++; 64116ebf90aSShri Abhyankar } 64216ebf90aSShri Abhyankar PetscFunctionReturn(0); 64316ebf90aSShri Abhyankar } 64416ebf90aSShri Abhyankar 645bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpibaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 64667877ebaSShri Abhyankar { 64767877ebaSShri Abhyankar Mat_MPIBAIJ *mat = (Mat_MPIBAIJ*)A->data; 64867877ebaSShri Abhyankar Mat_SeqBAIJ *aa = (Mat_SeqBAIJ*)(mat->A)->data; 64967877ebaSShri Abhyankar Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 65067877ebaSShri Abhyankar const PetscInt *ai = aa->i, *bi = bb->i, *aj = aa->j, *bj = bb->j,*ajj, *bjj; 651d985c460SShri Abhyankar const PetscInt *garray = mat->garray,mbs=mat->mbs,rstart=A->rmap->rstart; 65233d57670SJed Brown const PetscInt bs2=mat->bs2; 65367877ebaSShri Abhyankar PetscErrorCode ierr; 65433d57670SJed Brown PetscInt bs,nz,i,j,k,n,jj,irow,countA,countB,idx; 65567877ebaSShri Abhyankar PetscInt *row,*col; 65667877ebaSShri Abhyankar const PetscScalar *av=aa->a, *bv=bb->a,*v1,*v2; 65767877ebaSShri Abhyankar PetscScalar *val; 65867877ebaSShri Abhyankar 65967877ebaSShri Abhyankar PetscFunctionBegin; 66033d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 661bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 66267877ebaSShri Abhyankar nz = bs2*(aa->nz + bb->nz); 66367877ebaSShri Abhyankar *nnz = nz; 664185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 665185f6596SHong Zhang col = row + nz; 666185f6596SHong Zhang val = (PetscScalar*)(col + nz); 667185f6596SHong Zhang 66867877ebaSShri Abhyankar *r = row; *c = col; *v = val; 66967877ebaSShri Abhyankar } else { 67067877ebaSShri Abhyankar row = *r; col = *c; val = *v; 67167877ebaSShri Abhyankar } 67267877ebaSShri Abhyankar 673d985c460SShri Abhyankar jj = 0; irow = rstart; 67467877ebaSShri Abhyankar for (i=0; i<mbs; i++) { 67567877ebaSShri Abhyankar countA = ai[i+1] - ai[i]; 67667877ebaSShri Abhyankar countB = bi[i+1] - bi[i]; 67767877ebaSShri Abhyankar ajj = aj + ai[i]; 67867877ebaSShri Abhyankar bjj = bj + bi[i]; 67967877ebaSShri Abhyankar v1 = av + bs2*ai[i]; 68067877ebaSShri Abhyankar v2 = bv + bs2*bi[i]; 68167877ebaSShri Abhyankar 68267877ebaSShri Abhyankar idx = 0; 68367877ebaSShri Abhyankar /* A-part */ 68467877ebaSShri Abhyankar for (k=0; k<countA; k++) { 68567877ebaSShri Abhyankar for (j=0; j<bs; j++) { 68667877ebaSShri Abhyankar for (n=0; n<bs; n++) { 687bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 688d985c460SShri Abhyankar row[jj] = irow + n + shift; 689d985c460SShri Abhyankar col[jj] = rstart + bs*ajj[k] + j + shift; 69067877ebaSShri Abhyankar } 69167877ebaSShri Abhyankar val[jj++] = v1[idx++]; 69267877ebaSShri Abhyankar } 69367877ebaSShri Abhyankar } 69467877ebaSShri Abhyankar } 69567877ebaSShri Abhyankar 69667877ebaSShri Abhyankar idx = 0; 69767877ebaSShri Abhyankar /* B-part */ 69867877ebaSShri Abhyankar for (k=0; k<countB; k++) { 69967877ebaSShri Abhyankar for (j=0; j<bs; j++) { 70067877ebaSShri Abhyankar for (n=0; n<bs; n++) { 701bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 702d985c460SShri Abhyankar row[jj] = irow + n + shift; 703d985c460SShri Abhyankar col[jj] = bs*garray[bjj[k]] + j + shift; 70467877ebaSShri Abhyankar } 705d985c460SShri Abhyankar val[jj++] = v2[idx++]; 70667877ebaSShri Abhyankar } 70767877ebaSShri Abhyankar } 70867877ebaSShri Abhyankar } 709d985c460SShri Abhyankar irow += bs; 71067877ebaSShri Abhyankar } 71167877ebaSShri Abhyankar PetscFunctionReturn(0); 71267877ebaSShri Abhyankar } 71367877ebaSShri Abhyankar 714bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 71516ebf90aSShri Abhyankar { 71616ebf90aSShri Abhyankar const PetscInt *ai, *aj,*adiag, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 71716ebf90aSShri Abhyankar PetscErrorCode ierr; 718e0bace9bSHong Zhang PetscInt rstart,nz,nza,nzb,i,j,jj,irow,countA,countB; 71916ebf90aSShri Abhyankar PetscInt *row,*col; 72016ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 72116ebf90aSShri Abhyankar PetscScalar *val; 72216ebf90aSShri Abhyankar Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 72316ebf90aSShri Abhyankar Mat_SeqAIJ *aa =(Mat_SeqAIJ*)(mat->A)->data; 72416ebf90aSShri Abhyankar Mat_SeqAIJ *bb =(Mat_SeqAIJ*)(mat->B)->data; 72538548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 72638548759SBarry Smith PetscBool hermitian; 72738548759SBarry Smith #endif 72816ebf90aSShri Abhyankar 72916ebf90aSShri Abhyankar PetscFunctionBegin; 73038548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 73138548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 73238548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 73338548759SBarry Smith #endif 73438548759SBarry Smith ai = aa->i; 73538548759SBarry Smith aj = aa->j; 73638548759SBarry Smith adiag = aa->diag; 73738548759SBarry Smith bi = bb->i; 73838548759SBarry Smith bj = bb->j; 73938548759SBarry Smith garray = mat->garray; 74038548759SBarry Smith av = aa->a; 74138548759SBarry Smith bv = bb->a; 7422205254eSKarl Rupp 74316ebf90aSShri Abhyankar rstart = A->rmap->rstart; 74416ebf90aSShri Abhyankar 745bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 746e0bace9bSHong Zhang nza = 0; /* num of upper triangular entries in mat->A, including diagonals */ 747e0bace9bSHong Zhang nzb = 0; /* num of upper triangular entries in mat->B */ 74816ebf90aSShri Abhyankar for (i=0; i<m; i++) { 749e0bace9bSHong Zhang nza += (ai[i+1] - adiag[i]); 75016ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 75116ebf90aSShri Abhyankar bjj = bj + bi[i]; 752e0bace9bSHong Zhang for (j=0; j<countB; j++) { 753e0bace9bSHong Zhang if (garray[bjj[j]] > rstart) nzb++; 754e0bace9bSHong Zhang } 755e0bace9bSHong Zhang } 75616ebf90aSShri Abhyankar 757e0bace9bSHong Zhang nz = nza + nzb; /* total nz of upper triangular part of mat */ 75816ebf90aSShri Abhyankar *nnz = nz; 759185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 760185f6596SHong Zhang col = row + nz; 761185f6596SHong Zhang val = (PetscScalar*)(col + nz); 762185f6596SHong Zhang 76316ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 76416ebf90aSShri Abhyankar } else { 76516ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 76616ebf90aSShri Abhyankar } 76716ebf90aSShri Abhyankar 76816ebf90aSShri Abhyankar jj = 0; irow = rstart; 76916ebf90aSShri Abhyankar for (i=0; i<m; i++) { 77016ebf90aSShri Abhyankar ajj = aj + adiag[i]; /* ptr to the beginning of the diagonal of this row */ 77116ebf90aSShri Abhyankar v1 = av + adiag[i]; 77216ebf90aSShri Abhyankar countA = ai[i+1] - adiag[i]; 77316ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 77416ebf90aSShri Abhyankar bjj = bj + bi[i]; 77516ebf90aSShri Abhyankar v2 = bv + bi[i]; 77616ebf90aSShri Abhyankar 77716ebf90aSShri Abhyankar /* A-part */ 77816ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 779bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 78016ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 78116ebf90aSShri Abhyankar } 78216ebf90aSShri Abhyankar val[jj++] = v1[j]; 78316ebf90aSShri Abhyankar } 78416ebf90aSShri Abhyankar 78516ebf90aSShri Abhyankar /* B-part */ 78616ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 78716ebf90aSShri Abhyankar if (garray[bjj[j]] > rstart) { 788bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 78916ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 79016ebf90aSShri Abhyankar } 79116ebf90aSShri Abhyankar val[jj++] = v2[j]; 79216ebf90aSShri Abhyankar } 793397b6df1SKris Buschelman } 794397b6df1SKris Buschelman irow++; 795397b6df1SKris Buschelman } 796397b6df1SKris Buschelman PetscFunctionReturn(0); 797397b6df1SKris Buschelman } 798397b6df1SKris Buschelman 799dfbe8321SBarry Smith PetscErrorCode MatDestroy_MUMPS(Mat A) 800dfbe8321SBarry Smith { 801e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 802dfbe8321SBarry Smith PetscErrorCode ierr; 803b24902e0SBarry Smith 804397b6df1SKris Buschelman PetscFunctionBegin; 805a5e57a09SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 806a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_rhs);CHKERRQ(ierr); 807a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 808801fbe65SHong Zhang ierr = VecDestroy(&mumps->b_seq);CHKERRQ(ierr); 809a5e57a09SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 810a5e57a09SHong Zhang ierr = PetscFree(mumps->id.perm_in);CHKERRQ(ierr); 811a5e57a09SHong Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); 812b34f08ffSHong Zhang ierr = PetscFree(mumps->info);CHKERRQ(ierr); 81359ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 814a5e57a09SHong Zhang mumps->id.job = JOB_END; 8153ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 8163ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 8173ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { ierr = PetscOmpCtrlDestroy(&mumps->omp_ctrl);CHKERRQ(ierr); } 8183ab56b82SJunchao Zhang #endif 8193ab56b82SJunchao Zhang ierr = PetscFree2(mumps->recvcount,mumps->displs);CHKERRQ(ierr); 820e69c285eSBarry Smith ierr = PetscFree(A->data);CHKERRQ(ierr); 821bf0cc555SLisandro Dalcin 82297969023SHong Zhang /* clear composed functions */ 8233ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 8245a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSetSchurIS_C",NULL);CHKERRQ(ierr); 8255a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorCreateSchurComplement_C",NULL);CHKERRQ(ierr); 826bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetIcntl_C",NULL);CHKERRQ(ierr); 827bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetIcntl_C",NULL);CHKERRQ(ierr); 828bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetCntl_C",NULL);CHKERRQ(ierr); 829bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetCntl_C",NULL);CHKERRQ(ierr); 830ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfo_C",NULL);CHKERRQ(ierr); 831ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfog_C",NULL);CHKERRQ(ierr); 832ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfo_C",NULL);CHKERRQ(ierr); 833ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfog_C",NULL);CHKERRQ(ierr); 83489a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverse_C",NULL);CHKERRQ(ierr); 8350e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverseTranspose_C",NULL);CHKERRQ(ierr); 836397b6df1SKris Buschelman PetscFunctionReturn(0); 837397b6df1SKris Buschelman } 838397b6df1SKris Buschelman 839b24902e0SBarry Smith PetscErrorCode MatSolve_MUMPS(Mat A,Vec b,Vec x) 840b24902e0SBarry Smith { 841e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 842d54de34fSKris Buschelman PetscScalar *array; 84367877ebaSShri Abhyankar Vec b_seq; 844329ec9b3SHong Zhang IS is_iden,is_petsc; 845dfbe8321SBarry Smith PetscErrorCode ierr; 846329ec9b3SHong Zhang PetscInt i; 847cc86f929SStefano Zampini PetscBool second_solve = PETSC_FALSE; 848883f2eb9SBarry Smith static PetscBool cite1 = PETSC_FALSE,cite2 = PETSC_FALSE; 849397b6df1SKris Buschelman 850397b6df1SKris Buschelman PetscFunctionBegin; 851883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS01,\n author = {P.~R. Amestoy and I.~S. Duff and J.-Y. L'Excellent and J. Koster},\n title = {A fully asynchronous multifrontal solver using distributed dynamic scheduling},\n journal = {SIAM Journal on Matrix Analysis and Applications},\n volume = {23},\n number = {1},\n pages = {15--41},\n year = {2001}\n}\n",&cite1);CHKERRQ(ierr); 852883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS02,\n author = {P.~R. Amestoy and A. Guermouche and J.-Y. L'Excellent and S. Pralet},\n title = {Hybrid scheduling for the parallel solution of linear systems},\n journal = {Parallel Computing},\n volume = {32},\n number = {2},\n pages = {136--156},\n year = {2006}\n}\n",&cite2);CHKERRQ(ierr); 8532aca8efcSHong Zhang 854603e8f96SBarry Smith if (A->factorerrortype) { 8552aca8efcSHong Zhang ierr = PetscInfo2(A,"MatSolve is called with singular matrix factor, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 8562aca8efcSHong Zhang ierr = VecSetInf(x);CHKERRQ(ierr); 8572aca8efcSHong Zhang PetscFunctionReturn(0); 8582aca8efcSHong Zhang } 8592aca8efcSHong Zhang 860be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 861a5e57a09SHong Zhang mumps->id.nrhs = 1; 862a5e57a09SHong Zhang b_seq = mumps->b_seq; 8632d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 864329ec9b3SHong Zhang /* MUMPS only supports centralized rhs. Scatter b into a seqential rhs vector */ 865a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 866a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 867a5e57a09SHong Zhang if (!mumps->myid) {ierr = VecGetArray(b_seq,&array);CHKERRQ(ierr);} 8683ab56b82SJunchao Zhang } else { /* petsc_size == 1 */ 869397b6df1SKris Buschelman ierr = VecCopy(b,x);CHKERRQ(ierr); 870397b6df1SKris Buschelman ierr = VecGetArray(x,&array);CHKERRQ(ierr); 871397b6df1SKris Buschelman } 872a5e57a09SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 873a5e57a09SHong Zhang mumps->id.nrhs = 1; 874940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)array; 875397b6df1SKris Buschelman } 876397b6df1SKris Buschelman 877cc86f929SStefano Zampini /* 878cc86f929SStefano Zampini handle condensation step of Schur complement (if any) 879cc86f929SStefano Zampini We set by default ICNTL(26) == -1 when Schur indices have been provided by the user. 880cc86f929SStefano Zampini According to MUMPS (5.0.0) manual, any value should be harmful during the factorization phase 881cc86f929SStefano Zampini Unless the user provides a valid value for ICNTL(26), MatSolve and MatMatSolve routines solve the full system. 882cc86f929SStefano Zampini This requires an extra call to PetscMUMPS_c and the computation of the factors for S 883cc86f929SStefano Zampini */ 884583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 8852d4298aeSJunchao Zhang if (mumps->petsc_size > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 886cc86f929SStefano Zampini second_solve = PETSC_TRUE; 887b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 888cc86f929SStefano Zampini } 889397b6df1SKris Buschelman /* solve phase */ 890329ec9b3SHong Zhang /*-------------*/ 891a5e57a09SHong Zhang mumps->id.job = JOB_SOLVE; 8923ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 893a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 894397b6df1SKris Buschelman 895b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 896cc86f929SStefano Zampini if (second_solve) { 897b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 898cc86f929SStefano Zampini } 899b5fa320bSStefano Zampini 9002d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { /* convert mumps distributed solution to petsc mpi x */ 901a5e57a09SHong Zhang if (mumps->scat_sol && mumps->ICNTL9_pre != mumps->id.ICNTL(9)) { 902a5e57a09SHong Zhang /* when id.ICNTL(9) changes, the contents of lsol_loc may change (not its size, lsol_loc), recreates scat_sol */ 903a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 904397b6df1SKris Buschelman } 905a5e57a09SHong Zhang if (!mumps->scat_sol) { /* create scatter scat_sol */ 906a5e57a09SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,mumps->id.lsol_loc,0,1,&is_iden);CHKERRQ(ierr); /* from */ 907a5e57a09SHong Zhang for (i=0; i<mumps->id.lsol_loc; i++) { 908a5e57a09SHong Zhang mumps->id.isol_loc[i] -= 1; /* change Fortran style to C style */ 909a5e57a09SHong Zhang } 910a5e57a09SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,mumps->id.lsol_loc,mumps->id.isol_loc,PETSC_COPY_VALUES,&is_petsc);CHKERRQ(ierr); /* to */ 9119448b7f1SJunchao Zhang ierr = VecScatterCreate(mumps->x_seq,is_iden,x,is_petsc,&mumps->scat_sol);CHKERRQ(ierr); 9126bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 9136bf464f9SBarry Smith ierr = ISDestroy(&is_petsc);CHKERRQ(ierr); 9142205254eSKarl Rupp 915a5e57a09SHong Zhang mumps->ICNTL9_pre = mumps->id.ICNTL(9); /* save current value of id.ICNTL(9) */ 916397b6df1SKris Buschelman } 917a5e57a09SHong Zhang 918a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 919a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 920329ec9b3SHong Zhang } 921353d7d71SJunchao Zhang 922353d7d71SJunchao Zhang if (mumps->petsc_size > 1) {if (!mumps->myid) {ierr = VecRestoreArray(b_seq,&array);CHKERRQ(ierr);}} 923353d7d71SJunchao Zhang else {ierr = VecRestoreArray(x,&array);CHKERRQ(ierr);} 924353d7d71SJunchao Zhang 9259880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*mumps->id.RINFO(3));CHKERRQ(ierr); 926397b6df1SKris Buschelman PetscFunctionReturn(0); 927397b6df1SKris Buschelman } 928397b6df1SKris Buschelman 92951d5961aSHong Zhang PetscErrorCode MatSolveTranspose_MUMPS(Mat A,Vec b,Vec x) 93051d5961aSHong Zhang { 931e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 93251d5961aSHong Zhang PetscErrorCode ierr; 93351d5961aSHong Zhang 93451d5961aSHong Zhang PetscFunctionBegin; 935a5e57a09SHong Zhang mumps->id.ICNTL(9) = 0; 9360ad0caddSJed Brown ierr = MatSolve_MUMPS(A,b,x);CHKERRQ(ierr); 937a5e57a09SHong Zhang mumps->id.ICNTL(9) = 1; 93851d5961aSHong Zhang PetscFunctionReturn(0); 93951d5961aSHong Zhang } 94051d5961aSHong Zhang 941e0b74bf9SHong Zhang PetscErrorCode MatMatSolve_MUMPS(Mat A,Mat B,Mat X) 942e0b74bf9SHong Zhang { 943bda8bf91SBarry Smith PetscErrorCode ierr; 944b8491c3eSStefano Zampini Mat Bt = NULL; 945b8491c3eSStefano Zampini PetscBool flg, flgT; 946e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 947334c5f61SHong Zhang PetscInt i,nrhs,M; 9481683a169SBarry Smith PetscScalar *array; 9491683a169SBarry Smith const PetscScalar *rbray; 9505b7de3c2SKarl Rupp PetscInt lsol_loc,nlsol_loc,*isol_loc,*idxx,*isol_loc_save,iidx = 0; 9511683a169SBarry Smith PetscScalar *bray,*sol_loc,*sol_loc_save; 952be818407SHong Zhang IS is_to,is_from; 953beae5ec0SHong Zhang PetscInt k,proc,j,m,myrstart; 954be818407SHong Zhang const PetscInt *rstart; 955beae5ec0SHong Zhang Vec v_mpi,b_seq,msol_loc; 956be818407SHong Zhang VecScatter scat_rhs,scat_sol; 957be818407SHong Zhang PetscScalar *aa; 958be818407SHong Zhang PetscInt spnr,*ia,*ja; 959d56c302dSHong Zhang Mat_MPIAIJ *b = NULL; 960bda8bf91SBarry Smith 961e0b74bf9SHong Zhang PetscFunctionBegin; 962be818407SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)X,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 963be818407SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_ARG_WRONG,"Matrix X must be MATDENSE matrix"); 964be818407SHong Zhang 9650298fd71SBarry Smith ierr = PetscObjectTypeCompareAny((PetscObject)B,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 966be818407SHong Zhang if (flg) { /* dense B */ 967c0be3364SHong Zhang if (B->rmap->n != X->rmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Matrix B and X must have same row distribution"); 968be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 9690e6b8875SHong Zhang } else { /* sparse B */ 970be818407SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)B,MATTRANSPOSEMAT,&flgT);CHKERRQ(ierr); 9710e6b8875SHong Zhang if (flgT) { /* input B is transpose of actural RHS matrix, 9720e6b8875SHong Zhang because mumps requires sparse compressed COLUMN storage! See MatMatTransposeSolve_MUMPS() */ 973be818407SHong Zhang ierr = MatTransposeGetMat(B,&Bt);CHKERRQ(ierr); 9740f52d626SJunchao Zhang } else SETERRQ(PetscObjectComm((PetscObject)B),PETSC_ERR_ARG_WRONG,"Matrix B must be MATTRANSPOSEMAT matrix"); 975be818407SHong Zhang mumps->id.ICNTL(20)= 1; /* sparse RHS */ 976b8491c3eSStefano Zampini } 97787b22cf4SHong Zhang 9789481e6e9SHong Zhang ierr = MatGetSize(B,&M,&nrhs);CHKERRQ(ierr); 9799481e6e9SHong Zhang mumps->id.nrhs = nrhs; 9809481e6e9SHong Zhang mumps->id.lrhs = M; 9812b691707SHong Zhang mumps->id.rhs = NULL; 9829481e6e9SHong Zhang 9832d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 984b8491c3eSStefano Zampini PetscScalar *aa; 985b8491c3eSStefano Zampini PetscInt spnr,*ia,*ja; 986e94cce23SStefano Zampini PetscBool second_solve = PETSC_FALSE; 987b8491c3eSStefano Zampini 9882cd7d884SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 989b8491c3eSStefano Zampini mumps->id.rhs = (MumpsScalar*)array; 9902b691707SHong Zhang 9912b691707SHong Zhang if (!Bt) { /* dense B */ 9922b691707SHong Zhang /* copy B to X */ 9931683a169SBarry Smith ierr = MatDenseGetArrayRead(B,&rbray);CHKERRQ(ierr); 994580bdb30SBarry Smith ierr = PetscArraycpy(array,rbray,M*nrhs);CHKERRQ(ierr); 9951683a169SBarry Smith ierr = MatDenseRestoreArrayRead(B,&rbray);CHKERRQ(ierr); 9962b691707SHong Zhang } else { /* sparse B */ 997b8491c3eSStefano Zampini ierr = MatSeqAIJGetArray(Bt,&aa);CHKERRQ(ierr); 998be818407SHong Zhang ierr = MatGetRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 999c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 10002b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 1001b8491c3eSStefano Zampini mumps->id.irhs_ptr = ia; 1002b8491c3eSStefano Zampini mumps->id.irhs_sparse = ja; 1003b8491c3eSStefano Zampini mumps->id.nz_rhs = ia[spnr] - 1; 1004b8491c3eSStefano Zampini mumps->id.rhs_sparse = (MumpsScalar*)aa; 1005b8491c3eSStefano Zampini } 1006e94cce23SStefano Zampini /* handle condensation step of Schur complement (if any) */ 1007583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 1008e94cce23SStefano Zampini second_solve = PETSC_TRUE; 1009b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 1010e94cce23SStefano Zampini } 10112cd7d884SHong Zhang /* solve phase */ 10122cd7d884SHong Zhang /*-------------*/ 10132cd7d884SHong Zhang mumps->id.job = JOB_SOLVE; 10143ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 10152cd7d884SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 1016b5fa320bSStefano Zampini 1017b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 1018e94cce23SStefano Zampini if (second_solve) { 1019b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 1020e94cce23SStefano Zampini } 10212b691707SHong Zhang if (Bt) { /* sparse B */ 1022b8491c3eSStefano Zampini ierr = MatSeqAIJRestoreArray(Bt,&aa);CHKERRQ(ierr); 1023be818407SHong Zhang ierr = MatRestoreRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1024c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 1025b8491c3eSStefano Zampini } 10262cd7d884SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 1027be818407SHong Zhang PetscFunctionReturn(0); 1028be818407SHong Zhang } 1029801fbe65SHong Zhang 1030be818407SHong Zhang /*--------- parallel case: MUMPS requires rhs B to be centralized on the host! --------*/ 10312d4298aeSJunchao Zhang if (mumps->petsc_size > 1 && mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 1032241dbb5eSStefano Zampini 1033beae5ec0SHong Zhang /* create msol_loc to hold mumps local solution */ 10341683a169SBarry Smith isol_loc_save = mumps->id.isol_loc; /* save it for MatSolve() */ 10351683a169SBarry Smith sol_loc_save = (PetscScalar*)mumps->id.sol_loc; 1036801fbe65SHong Zhang 1037a1dfcbd9SJunchao Zhang lsol_loc = mumps->id.lsol_loc; 103871aed81dSHong Zhang nlsol_loc = nrhs*lsol_loc; /* length of sol_loc */ 1039a1dfcbd9SJunchao Zhang ierr = PetscMalloc2(nlsol_loc,&sol_loc,lsol_loc,&isol_loc);CHKERRQ(ierr); 1040940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 1041801fbe65SHong Zhang mumps->id.isol_loc = isol_loc; 1042801fbe65SHong Zhang 1043beae5ec0SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,nlsol_loc,(PetscScalar*)sol_loc,&msol_loc);CHKERRQ(ierr); 10442cd7d884SHong Zhang 10452b691707SHong Zhang if (!Bt) { /* dense B */ 104680577c12SJunchao Zhang /* TODO: Because of non-contiguous indices, the created vecscatter scat_rhs is not done in MPI_Gather, resulting in 104780577c12SJunchao Zhang very inefficient communication. An optimization is to use VecScatterCreateToZero to gather B to rank 0. Then on rank 104880577c12SJunchao Zhang 0, re-arrange B into desired order, which is a local operation. 104980577c12SJunchao Zhang */ 105080577c12SJunchao Zhang 1051beae5ec0SHong Zhang /* scatter v_mpi to b_seq because MUMPS only supports centralized rhs */ 1052be818407SHong Zhang /* wrap dense rhs matrix B into a vector v_mpi */ 10532b691707SHong Zhang ierr = MatGetLocalSize(B,&m,NULL);CHKERRQ(ierr); 10542b691707SHong Zhang ierr = MatDenseGetArray(B,&bray);CHKERRQ(ierr); 10552b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)B),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 10562b691707SHong Zhang ierr = MatDenseRestoreArray(B,&bray);CHKERRQ(ierr); 10572b691707SHong Zhang 1058be818407SHong Zhang /* scatter v_mpi to b_seq in proc[0]. MUMPS requires rhs to be centralized on the host! */ 1059801fbe65SHong Zhang if (!mumps->myid) { 1060beae5ec0SHong Zhang PetscInt *idx; 1061beae5ec0SHong Zhang /* idx: maps from k-th index of v_mpi to (i,j)-th global entry of B */ 1062beae5ec0SHong Zhang ierr = PetscMalloc1(nrhs*M,&idx);CHKERRQ(ierr); 1063be818407SHong Zhang ierr = MatGetOwnershipRanges(B,&rstart);CHKERRQ(ierr); 1064be818407SHong Zhang k = 0; 10652d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 1066be818407SHong Zhang for (j=0; j<nrhs; j++){ 1067beae5ec0SHong Zhang for (i=rstart[proc]; i<rstart[proc+1]; i++) idx[k++] = j*M + i; 1068be818407SHong Zhang } 1069be818407SHong Zhang } 1070be818407SHong Zhang 1071334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,nrhs*M,&b_seq);CHKERRQ(ierr); 1072beae5ec0SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nrhs*M,idx,PETSC_OWN_POINTER,&is_to);CHKERRQ(ierr); 1073801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nrhs*M,0,1,&is_from);CHKERRQ(ierr); 1074801fbe65SHong Zhang } else { 1075334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&b_seq);CHKERRQ(ierr); 1076801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_to);CHKERRQ(ierr); 1077801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_from);CHKERRQ(ierr); 1078801fbe65SHong Zhang } 10799448b7f1SJunchao Zhang ierr = VecScatterCreate(v_mpi,is_from,b_seq,is_to,&scat_rhs);CHKERRQ(ierr); 1080334c5f61SHong Zhang ierr = VecScatterBegin(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1081801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1082801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1083334c5f61SHong Zhang ierr = VecScatterEnd(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1084801fbe65SHong Zhang 1085801fbe65SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 1086334c5f61SHong Zhang ierr = VecGetArray(b_seq,&bray);CHKERRQ(ierr); 1087940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)bray; 1088334c5f61SHong Zhang ierr = VecRestoreArray(b_seq,&bray);CHKERRQ(ierr); 1089801fbe65SHong Zhang } 1090801fbe65SHong Zhang 10912b691707SHong Zhang } else { /* sparse B */ 10922b691707SHong Zhang b = (Mat_MPIAIJ*)Bt->data; 10932b691707SHong Zhang 1094be818407SHong Zhang /* wrap dense X into a vector v_mpi */ 10952b691707SHong Zhang ierr = MatGetLocalSize(X,&m,NULL);CHKERRQ(ierr); 10962b691707SHong Zhang ierr = MatDenseGetArray(X,&bray);CHKERRQ(ierr); 10972b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)X),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 10982b691707SHong Zhang ierr = MatDenseRestoreArray(X,&bray);CHKERRQ(ierr); 10992b691707SHong Zhang 11002b691707SHong Zhang if (!mumps->myid) { 11012b691707SHong Zhang ierr = MatSeqAIJGetArray(b->A,&aa);CHKERRQ(ierr); 1102be818407SHong Zhang ierr = MatGetRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1103c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 11042b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 11052b691707SHong Zhang mumps->id.irhs_ptr = ia; 11062b691707SHong Zhang mumps->id.irhs_sparse = ja; 11072b691707SHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 11082b691707SHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 11092b691707SHong Zhang } else { 11102b691707SHong Zhang mumps->id.irhs_ptr = NULL; 11112b691707SHong Zhang mumps->id.irhs_sparse = NULL; 11122b691707SHong Zhang mumps->id.nz_rhs = 0; 11132b691707SHong Zhang mumps->id.rhs_sparse = NULL; 11142b691707SHong Zhang } 11152b691707SHong Zhang } 11162b691707SHong Zhang 1117801fbe65SHong Zhang /* solve phase */ 1118801fbe65SHong Zhang /*-------------*/ 1119801fbe65SHong Zhang mumps->id.job = JOB_SOLVE; 11203ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1121801fbe65SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 1122801fbe65SHong Zhang 1123334c5f61SHong Zhang /* scatter mumps distributed solution to petsc vector v_mpi, which shares local arrays with solution matrix X */ 112474f0fcc7SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 112574f0fcc7SHong Zhang ierr = VecPlaceArray(v_mpi,array);CHKERRQ(ierr); 1126801fbe65SHong Zhang 1127334c5f61SHong Zhang /* create scatter scat_sol */ 1128be818407SHong Zhang ierr = MatGetOwnershipRanges(X,&rstart);CHKERRQ(ierr); 1129beae5ec0SHong Zhang /* iidx: index for scatter mumps solution to petsc X */ 1130beae5ec0SHong Zhang 1131beae5ec0SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nlsol_loc,0,1,&is_from);CHKERRQ(ierr); 1132beae5ec0SHong Zhang ierr = PetscMalloc1(nlsol_loc,&idxx);CHKERRQ(ierr); 1133beae5ec0SHong Zhang for (i=0; i<lsol_loc; i++) { 1134beae5ec0SHong Zhang isol_loc[i] -= 1; /* change Fortran style to C style. isol_loc[i+j*lsol_loc] contains x[isol_loc[i]] in j-th vector */ 1135beae5ec0SHong Zhang 11362d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 1137beae5ec0SHong Zhang if (isol_loc[i] >= rstart[proc] && isol_loc[i] < rstart[proc+1]) { 1138beae5ec0SHong Zhang myrstart = rstart[proc]; 1139beae5ec0SHong Zhang k = isol_loc[i] - myrstart; /* local index on 1st column of petsc vector X */ 1140beae5ec0SHong Zhang iidx = k + myrstart*nrhs; /* maps mumps isol_loc[i] to petsc index in X */ 1141beae5ec0SHong Zhang m = rstart[proc+1] - rstart[proc]; /* rows of X for this proc */ 1142beae5ec0SHong Zhang break; 1143be818407SHong Zhang } 1144be818407SHong Zhang } 1145be818407SHong Zhang 1146beae5ec0SHong Zhang for (j=0; j<nrhs; j++) idxx[i+j*lsol_loc] = iidx + j*m; 1147801fbe65SHong Zhang } 1148be818407SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nlsol_loc,idxx,PETSC_COPY_VALUES,&is_to);CHKERRQ(ierr); 1149beae5ec0SHong Zhang ierr = VecScatterCreate(msol_loc,is_from,v_mpi,is_to,&scat_sol);CHKERRQ(ierr); 1150beae5ec0SHong Zhang ierr = VecScatterBegin(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1151801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1152801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1153beae5ec0SHong Zhang ierr = VecScatterEnd(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1154801fbe65SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 115571aed81dSHong Zhang 115671aed81dSHong Zhang /* free spaces */ 11571683a169SBarry Smith mumps->id.sol_loc = (MumpsScalar*)sol_loc_save; 115871aed81dSHong Zhang mumps->id.isol_loc = isol_loc_save; 115971aed81dSHong Zhang 116071aed81dSHong Zhang ierr = PetscFree2(sol_loc,isol_loc);CHKERRQ(ierr); 1161801fbe65SHong Zhang ierr = PetscFree(idxx);CHKERRQ(ierr); 1162beae5ec0SHong Zhang ierr = VecDestroy(&msol_loc);CHKERRQ(ierr); 116374f0fcc7SHong Zhang ierr = VecDestroy(&v_mpi);CHKERRQ(ierr); 11642b691707SHong Zhang if (Bt) { 11652b691707SHong Zhang if (!mumps->myid) { 1166d56c302dSHong Zhang b = (Mat_MPIAIJ*)Bt->data; 11672b691707SHong Zhang ierr = MatSeqAIJRestoreArray(b->A,&aa);CHKERRQ(ierr); 1168be818407SHong Zhang ierr = MatRestoreRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1169c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 11702b691707SHong Zhang } 11712b691707SHong Zhang } else { 1172334c5f61SHong Zhang ierr = VecDestroy(&b_seq);CHKERRQ(ierr); 1173334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_rhs);CHKERRQ(ierr); 11742b691707SHong Zhang } 1175334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_sol);CHKERRQ(ierr); 11769880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*nrhs*mumps->id.RINFO(3));CHKERRQ(ierr); 1177e0b74bf9SHong Zhang PetscFunctionReturn(0); 1178e0b74bf9SHong Zhang } 1179e0b74bf9SHong Zhang 1180eb3ef3b2SHong Zhang PetscErrorCode MatMatTransposeSolve_MUMPS(Mat A,Mat Bt,Mat X) 1181eb3ef3b2SHong Zhang { 1182eb3ef3b2SHong Zhang PetscErrorCode ierr; 1183eb3ef3b2SHong Zhang PetscBool flg; 1184eb3ef3b2SHong Zhang Mat B; 1185eb3ef3b2SHong Zhang 1186eb3ef3b2SHong Zhang PetscFunctionBegin; 1187eb3ef3b2SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)Bt,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 1188eb3ef3b2SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)Bt),PETSC_ERR_ARG_WRONG,"Matrix Bt must be MATAIJ matrix"); 1189eb3ef3b2SHong Zhang 1190eb3ef3b2SHong Zhang /* Create B=Bt^T that uses Bt's data structure */ 1191eb3ef3b2SHong Zhang ierr = MatCreateTranspose(Bt,&B);CHKERRQ(ierr); 1192eb3ef3b2SHong Zhang 11930e6b8875SHong Zhang ierr = MatMatSolve_MUMPS(A,B,X);CHKERRQ(ierr); 1194eb3ef3b2SHong Zhang ierr = MatDestroy(&B);CHKERRQ(ierr); 1195eb3ef3b2SHong Zhang PetscFunctionReturn(0); 1196eb3ef3b2SHong Zhang } 1197eb3ef3b2SHong Zhang 1198ace3df97SHong Zhang #if !defined(PETSC_USE_COMPLEX) 1199a58c3f20SHong Zhang /* 1200a58c3f20SHong Zhang input: 1201a58c3f20SHong Zhang F: numeric factor 1202a58c3f20SHong Zhang output: 1203a58c3f20SHong Zhang nneg: total number of negative pivots 120419d49a3bSHong Zhang nzero: total number of zero pivots 120519d49a3bSHong Zhang npos: (global dimension of F) - nneg - nzero 1206a58c3f20SHong Zhang */ 1207dfbe8321SBarry Smith PetscErrorCode MatGetInertia_SBAIJMUMPS(Mat F,int *nneg,int *nzero,int *npos) 1208a58c3f20SHong Zhang { 1209e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1210dfbe8321SBarry Smith PetscErrorCode ierr; 1211c1490034SHong Zhang PetscMPIInt size; 1212a58c3f20SHong Zhang 1213a58c3f20SHong Zhang PetscFunctionBegin; 1214ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)F),&size);CHKERRQ(ierr); 1215bcb30aebSHong Zhang /* MUMPS 4.3.1 calls ScaLAPACK when ICNTL(13)=0 (default), which does not offer the possibility to compute the inertia of a dense matrix. Set ICNTL(13)=1 to skip ScaLAPACK */ 1216a5e57a09SHong Zhang if (size > 1 && mumps->id.ICNTL(13) != 1) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"ICNTL(13)=%d. -mat_mumps_icntl_13 must be set as 1 for correct global matrix inertia\n",mumps->id.INFOG(13)); 1217ed85ac9fSHong Zhang 1218710ac8efSHong Zhang if (nneg) *nneg = mumps->id.INFOG(12); 1219ed85ac9fSHong Zhang if (nzero || npos) { 1220ed85ac9fSHong Zhang if (mumps->id.ICNTL(24) != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"-mat_mumps_icntl_24 must be set as 1 for null pivot row detection"); 1221710ac8efSHong Zhang if (nzero) *nzero = mumps->id.INFOG(28); 1222710ac8efSHong Zhang if (npos) *npos = F->rmap->N - (mumps->id.INFOG(12) + mumps->id.INFOG(28)); 1223a58c3f20SHong Zhang } 1224a58c3f20SHong Zhang PetscFunctionReturn(0); 1225a58c3f20SHong Zhang } 122619d49a3bSHong Zhang #endif 1227a58c3f20SHong Zhang 12283ab56b82SJunchao Zhang PetscErrorCode MatMumpsGatherNonzerosOnMaster(MatReuse reuse,Mat_MUMPS *mumps) 12293ab56b82SJunchao Zhang { 12303ab56b82SJunchao Zhang PetscErrorCode ierr; 12316ac9f4daSSatish Balay PetscInt i,nz=0,*irn,*jcn=0; 12326ac9f4daSSatish Balay PetscScalar *val=0; 12333ab56b82SJunchao Zhang PetscMPIInt mpinz,*recvcount=NULL,*displs=NULL; 12343ab56b82SJunchao Zhang 12353ab56b82SJunchao Zhang PetscFunctionBegin; 12363ab56b82SJunchao Zhang if (mumps->omp_comm_size > 1) { 12373ab56b82SJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { 12383ab56b82SJunchao Zhang /* master first gathers counts of nonzeros to receive */ 12393ab56b82SJunchao Zhang if (mumps->is_omp_master) { ierr = PetscMalloc2(mumps->omp_comm_size,&recvcount,mumps->omp_comm_size,&displs);CHKERRQ(ierr); } 12403ab56b82SJunchao Zhang ierr = PetscMPIIntCast(mumps->nz,&mpinz);CHKERRQ(ierr); 12413ab56b82SJunchao Zhang ierr = MPI_Gather(&mpinz,1,MPI_INT,recvcount,1,MPI_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12423ab56b82SJunchao Zhang 12433ab56b82SJunchao Zhang /* master allocates memory to receive nonzeros */ 12443ab56b82SJunchao Zhang if (mumps->is_omp_master) { 12453ab56b82SJunchao Zhang displs[0] = 0; 12463ab56b82SJunchao Zhang for (i=1; i<mumps->omp_comm_size; i++) displs[i] = displs[i-1] + recvcount[i-1]; 12473ab56b82SJunchao Zhang nz = displs[mumps->omp_comm_size-1] + recvcount[mumps->omp_comm_size-1]; 12483ab56b82SJunchao Zhang ierr = PetscMalloc(2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar),&irn);CHKERRQ(ierr); 12493ab56b82SJunchao Zhang jcn = irn + nz; 12503ab56b82SJunchao Zhang val = (PetscScalar*)(jcn + nz); 12513ab56b82SJunchao Zhang } 12523ab56b82SJunchao Zhang 12533ab56b82SJunchao Zhang /* save the gatherv plan */ 12543ab56b82SJunchao Zhang mumps->mpinz = mpinz; /* used as send count */ 12553ab56b82SJunchao Zhang mumps->recvcount = recvcount; 12563ab56b82SJunchao Zhang mumps->displs = displs; 12573ab56b82SJunchao Zhang 12583ab56b82SJunchao Zhang /* master gathers nonzeros */ 12593ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->irn,mpinz,MPIU_INT,irn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12603ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->jcn,mpinz,MPIU_INT,jcn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12613ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->val,mpinz,MPIU_SCALAR,val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12623ab56b82SJunchao Zhang 12633ab56b82SJunchao Zhang /* master frees its row/col/val and replaces them with bigger arrays */ 12643ab56b82SJunchao Zhang if (mumps->is_omp_master) { 12653ab56b82SJunchao Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); /* irn/jcn/val are allocated together so free only irn */ 12663ab56b82SJunchao Zhang mumps->nz = nz; /* it is a sum of mpinz over omp_comm */ 12673ab56b82SJunchao Zhang mumps->irn = irn; 12683ab56b82SJunchao Zhang mumps->jcn = jcn; 12693ab56b82SJunchao Zhang mumps->val = val; 12703ab56b82SJunchao Zhang } 12713ab56b82SJunchao Zhang } else { 12723ab56b82SJunchao Zhang ierr = MPI_Gatherv((mumps->is_omp_master?MPI_IN_PLACE:mumps->val),mumps->mpinz,MPIU_SCALAR,mumps->val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 12733ab56b82SJunchao Zhang } 12743ab56b82SJunchao Zhang } 12753ab56b82SJunchao Zhang PetscFunctionReturn(0); 12763ab56b82SJunchao Zhang } 12773ab56b82SJunchao Zhang 12780481f469SBarry Smith PetscErrorCode MatFactorNumeric_MUMPS(Mat F,Mat A,const MatFactorInfo *info) 1279af281ebdSHong Zhang { 1280e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)(F)->data; 12816849ba73SBarry Smith PetscErrorCode ierr; 1282ace3abfcSBarry Smith PetscBool isMPIAIJ; 1283397b6df1SKris Buschelman 1284397b6df1SKris Buschelman PetscFunctionBegin; 12856baea169SHong Zhang if (mumps->id.INFOG(1) < 0) { 12862aca8efcSHong Zhang if (mumps->id.INFOG(1) == -6) { 12872aca8efcSHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called with singular matrix structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 12886baea169SHong Zhang } 12896baea169SHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called after analysis phase fails, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 12902aca8efcSHong Zhang PetscFunctionReturn(0); 12912aca8efcSHong Zhang } 12926baea169SHong Zhang 1293a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_REUSE_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 12943ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_REUSE_MATRIX,mumps);CHKERRQ(ierr); 1295397b6df1SKris Buschelman 1296397b6df1SKris Buschelman /* numerical factorization phase */ 1297329ec9b3SHong Zhang /*-------------------------------*/ 1298a5e57a09SHong Zhang mumps->id.job = JOB_FACTNUMERIC; 12994e34a73bSHong Zhang if (!mumps->id.ICNTL(18)) { /* A is centralized */ 1300a5e57a09SHong Zhang if (!mumps->myid) { 1301940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 1302397b6df1SKris Buschelman } 1303397b6df1SKris Buschelman } else { 1304940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 1305397b6df1SKris Buschelman } 13063ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1307a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) { 1308c0d63f2fSHong Zhang if (A->erroriffailure) { 1309c0d63f2fSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 1310151787a6SHong Zhang } else { 1311c0d63f2fSHong Zhang if (mumps->id.INFOG(1) == -10) { /* numerically singular matrix */ 13122aca8efcSHong Zhang ierr = PetscInfo2(F,"matrix is numerically singular, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1313603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 1314c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -13) { 1315c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, cannot allocate required memory %d megabytes\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1316603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 1317c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -8 || mumps->id.INFOG(1) == -9 || (-16 < mumps->id.INFOG(1) && mumps->id.INFOG(1) < -10) ) { 1318c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d, problem with workarray \n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1319603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 13202aca8efcSHong Zhang } else { 1321c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1322603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 1323151787a6SHong Zhang } 13242aca8efcSHong Zhang } 1325397b6df1SKris Buschelman } 1326a5e57a09SHong Zhang if (!mumps->myid && mumps->id.ICNTL(16) > 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB," mumps->id.ICNTL(16):=%d\n",mumps->id.INFOG(16)); 1327397b6df1SKris Buschelman 1328b3cb21ddSStefano Zampini F->assembled = PETSC_TRUE; 1329a5e57a09SHong Zhang mumps->matstruc = SAME_NONZERO_PATTERN; 1330b3cb21ddSStefano Zampini if (F->schur) { /* reset Schur status to unfactored */ 13313cb7dd0eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 13323cb7dd0eSStefano Zampini F->schur->valid_GPU_matrix = PETSC_OFFLOAD_CPU; 13333cb7dd0eSStefano Zampini #endif 1334b3cb21ddSStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 1335b3cb21ddSStefano Zampini mumps->id.ICNTL(19) = 2; 1336b3cb21ddSStefano Zampini ierr = MatTranspose(F->schur,MAT_INPLACE_MATRIX,&F->schur);CHKERRQ(ierr); 1337b3cb21ddSStefano Zampini } 1338b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,NULL,MAT_FACTOR_SCHUR_UNFACTORED);CHKERRQ(ierr); 1339b3cb21ddSStefano Zampini } 134067877ebaSShri Abhyankar 1341066565c5SStefano Zampini /* just to be sure that ICNTL(19) value returned by a call from MatMumpsGetIcntl is always consistent */ 1342066565c5SStefano Zampini if (!mumps->sym && mumps->id.ICNTL(19) && mumps->id.ICNTL(19) != 1) mumps->id.ICNTL(19) = 3; 1343066565c5SStefano Zampini 13443ab56b82SJunchao Zhang if (!mumps->is_omp_master) mumps->id.INFO(23) = 0; 13452d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 134667877ebaSShri Abhyankar PetscInt lsol_loc; 134767877ebaSShri Abhyankar PetscScalar *sol_loc; 13482205254eSKarl Rupp 1349c2093ab7SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&isMPIAIJ);CHKERRQ(ierr); 1350c2093ab7SHong Zhang 1351c2093ab7SHong Zhang /* distributed solution; Create x_seq=sol_loc for repeated use */ 1352c2093ab7SHong Zhang if (mumps->x_seq) { 1353c2093ab7SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 1354c2093ab7SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 1355c2093ab7SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 1356c2093ab7SHong Zhang } 1357a5e57a09SHong Zhang lsol_loc = mumps->id.INFO(23); /* length of sol_loc */ 1358dcca6d9dSJed Brown ierr = PetscMalloc2(lsol_loc,&sol_loc,lsol_loc,&mumps->id.isol_loc);CHKERRQ(ierr); 1359a5e57a09SHong Zhang mumps->id.lsol_loc = lsol_loc; 1360940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 1361a5e57a09SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,lsol_loc,sol_loc,&mumps->x_seq);CHKERRQ(ierr); 136267877ebaSShri Abhyankar } 13639880c9b4SStefano Zampini ierr = PetscLogFlops(mumps->id.RINFO(2));CHKERRQ(ierr); 1364397b6df1SKris Buschelman PetscFunctionReturn(0); 1365397b6df1SKris Buschelman } 1366397b6df1SKris Buschelman 13679a2535b5SHong Zhang /* Sets MUMPS options from the options database */ 13689a2535b5SHong Zhang PetscErrorCode PetscSetMUMPSFromOptions(Mat F, Mat A) 1369dcd589f8SShri Abhyankar { 1370e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1371dcd589f8SShri Abhyankar PetscErrorCode ierr; 1372a0e18203SThibaut Appel PetscInt icntl,info[80],i,ninfo=80; 1373ace3abfcSBarry Smith PetscBool flg; 1374dcd589f8SShri Abhyankar 1375dcd589f8SShri Abhyankar PetscFunctionBegin; 1376ce94432eSBarry Smith ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MUMPS Options","Mat");CHKERRQ(ierr); 13779a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_1","ICNTL(1): output stream for error messages","None",mumps->id.ICNTL(1),&icntl,&flg);CHKERRQ(ierr); 13789a2535b5SHong Zhang if (flg) mumps->id.ICNTL(1) = icntl; 13799a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_2","ICNTL(2): output stream for diagnostic printing, statistics, and warning","None",mumps->id.ICNTL(2),&icntl,&flg);CHKERRQ(ierr); 13809a2535b5SHong Zhang if (flg) mumps->id.ICNTL(2) = icntl; 13819a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_3","ICNTL(3): output stream for global information, collected on the host","None",mumps->id.ICNTL(3),&icntl,&flg);CHKERRQ(ierr); 13829a2535b5SHong Zhang if (flg) mumps->id.ICNTL(3) = icntl; 1383dcd589f8SShri Abhyankar 13849a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_4","ICNTL(4): level of printing (0 to 4)","None",mumps->id.ICNTL(4),&icntl,&flg);CHKERRQ(ierr); 13859a2535b5SHong Zhang if (flg) mumps->id.ICNTL(4) = icntl; 13869a2535b5SHong Zhang if (mumps->id.ICNTL(4) || PetscLogPrintInfo) mumps->id.ICNTL(3) = 6; /* resume MUMPS default id.ICNTL(3) = 6 */ 13879a2535b5SHong Zhang 1388d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_6","ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7)","None",mumps->id.ICNTL(6),&icntl,&flg);CHKERRQ(ierr); 13899a2535b5SHong Zhang if (flg) mumps->id.ICNTL(6) = icntl; 13909a2535b5SHong Zhang 1391d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_7","ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis","None",mumps->id.ICNTL(7),&icntl,&flg);CHKERRQ(ierr); 1392dcd589f8SShri Abhyankar if (flg) { 13932d4298aeSJunchao Zhang if (icntl== 1 && mumps->petsc_size > 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"pivot order be set by the user in PERM_IN -- not supported by the PETSc/MUMPS interface\n"); 13942205254eSKarl Rupp else mumps->id.ICNTL(7) = icntl; 1395dcd589f8SShri Abhyankar } 1396e0b74bf9SHong Zhang 13970298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_8","ICNTL(8): scaling strategy (-2 to 8 or 77)","None",mumps->id.ICNTL(8),&mumps->id.ICNTL(8),NULL);CHKERRQ(ierr); 1398d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_9","ICNTL(9): computes the solution using A or A^T","None",mumps->id.ICNTL(9),&mumps->id.ICNTL(9),NULL);CHKERRQ(ierr); handled by MatSolveTranspose_MUMPS() */ 13990298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_10","ICNTL(10): max num of refinements","None",mumps->id.ICNTL(10),&mumps->id.ICNTL(10),NULL);CHKERRQ(ierr); 1400d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_11","ICNTL(11): statistics related to an error analysis (via -ksp_view)","None",mumps->id.ICNTL(11),&mumps->id.ICNTL(11),NULL);CHKERRQ(ierr); 1401d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_12","ICNTL(12): an ordering strategy for symmetric matrices (0 to 3)","None",mumps->id.ICNTL(12),&mumps->id.ICNTL(12),NULL);CHKERRQ(ierr); 1402d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_13","ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting","None",mumps->id.ICNTL(13),&mumps->id.ICNTL(13),NULL);CHKERRQ(ierr); 1403d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_14","ICNTL(14): percentage increase in the estimated working space","None",mumps->id.ICNTL(14),&mumps->id.ICNTL(14),NULL);CHKERRQ(ierr); 1404d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_19","ICNTL(19): computes the Schur complement","None",mumps->id.ICNTL(19),&mumps->id.ICNTL(19),NULL);CHKERRQ(ierr); 140559ac8732SStefano Zampini if (mumps->id.ICNTL(19) <= 0 || mumps->id.ICNTL(19) > 3) { /* reset any schur data (if any) */ 1406b3cb21ddSStefano Zampini ierr = MatDestroy(&F->schur);CHKERRQ(ierr); 140759ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 140859ac8732SStefano Zampini } 14094e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_20","ICNTL(20): the format (dense or sparse) of the right-hand sides","None",mumps->id.ICNTL(20),&mumps->id.ICNTL(20),NULL);CHKERRQ(ierr); -- sparse rhs is not supported in PETSc API */ 1410d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_21","ICNTL(21): the distribution (centralized or distributed) of the solution vectors","None",mumps->id.ICNTL(21),&mumps->id.ICNTL(21),NULL);CHKERRQ(ierr); we only use distributed solution vector */ 14119a2535b5SHong Zhang 1412d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_22","ICNTL(22): in-core/out-of-core factorization and solve (0 or 1)","None",mumps->id.ICNTL(22),&mumps->id.ICNTL(22),NULL);CHKERRQ(ierr); 14130298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_23","ICNTL(23): max size of the working memory (MB) that can allocate per processor","None",mumps->id.ICNTL(23),&mumps->id.ICNTL(23),NULL);CHKERRQ(ierr); 14140298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_24","ICNTL(24): detection of null pivot rows (0 or 1)","None",mumps->id.ICNTL(24),&mumps->id.ICNTL(24),NULL);CHKERRQ(ierr); 14159a2535b5SHong Zhang if (mumps->id.ICNTL(24)) { 14169a2535b5SHong Zhang mumps->id.ICNTL(13) = 1; /* turn-off ScaLAPACK to help with the correct detection of null pivots */ 1417d7ebd59bSHong Zhang } 1418d7ebd59bSHong Zhang 1419b4ed93dbSHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_25","ICNTL(25): computes a solution of a deficient matrix and a null space basis","None",mumps->id.ICNTL(25),&mumps->id.ICNTL(25),NULL);CHKERRQ(ierr); 1420d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_26","ICNTL(26): drives the solution phase if a Schur complement matrix","None",mumps->id.ICNTL(26),&mumps->id.ICNTL(26),NULL);CHKERRQ(ierr); 14212cd7d884SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_27","ICNTL(27): the blocking size for multiple right-hand sides","None",mumps->id.ICNTL(27),&mumps->id.ICNTL(27),NULL);CHKERRQ(ierr); 14220298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_28","ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering","None",mumps->id.ICNTL(28),&mumps->id.ICNTL(28),NULL);CHKERRQ(ierr); 1423d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_29","ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis","None",mumps->id.ICNTL(29),&mumps->id.ICNTL(29),NULL);CHKERRQ(ierr); 142489a9c03aSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_30","ICNTL(30): compute user-specified set of entries in inv(A)","None",mumps->id.ICNTL(30),&mumps->id.ICNTL(30),NULL);CHKERRQ(ierr); */ /* call MatMumpsGetInverse() directly */ 1425d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_31","ICNTL(31): indicates which factors may be discarded during factorization","None",mumps->id.ICNTL(31),&mumps->id.ICNTL(31),NULL);CHKERRQ(ierr); 14264e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_32","ICNTL(32): performs the forward elemination of the right-hand sides during factorization","None",mumps->id.ICNTL(32),&mumps->id.ICNTL(32),NULL);CHKERRQ(ierr); -- not supported by PETSc API */ 14270298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_33","ICNTL(33): compute determinant","None",mumps->id.ICNTL(33),&mumps->id.ICNTL(33),NULL);CHKERRQ(ierr); 1428a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_35","ICNTL(35): activates Block Low Rank (BLR) based factorization","None",mumps->id.ICNTL(35),&mumps->id.ICNTL(35),NULL);CHKERRQ(ierr); 1429a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_36","ICNTL(36): choice of BLR factorization variant","None",mumps->id.ICNTL(36),&mumps->id.ICNTL(36),NULL);CHKERRQ(ierr); 1430a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_38","ICNTL(38): estimated compression rate of LU factors with BLR","None",mumps->id.ICNTL(38),&mumps->id.ICNTL(38),NULL);CHKERRQ(ierr); 1431dcd589f8SShri Abhyankar 14320298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr); 14330298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr); 14340298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr); 14350298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr); 14360298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_5","CNTL(5): fixation for null pivots","None",mumps->id.CNTL(5),&mumps->id.CNTL(5),NULL);CHKERRQ(ierr); 1437b4ed93dbSHong Zhang ierr = PetscOptionsReal("-mat_mumps_cntl_7","CNTL(7): dropping parameter used during BLR","None",mumps->id.CNTL(7),&mumps->id.CNTL(7),NULL);CHKERRQ(ierr); 1438e5bb22a1SHong Zhang 14392a808120SBarry Smith ierr = PetscOptionsString("-mat_mumps_ooc_tmpdir", "out of core directory", "None", mumps->id.ooc_tmpdir, mumps->id.ooc_tmpdir, 256, NULL);CHKERRQ(ierr); 1440b34f08ffSHong Zhang 144116d797efSHong Zhang ierr = PetscOptionsIntArray("-mat_mumps_view_info","request INFO local to each processor","",info,&ninfo,NULL);CHKERRQ(ierr); 1442b34f08ffSHong Zhang if (ninfo) { 1443a0e18203SThibaut Appel if (ninfo > 80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"number of INFO %d must <= 80\n",ninfo); 1444b34f08ffSHong Zhang ierr = PetscMalloc1(ninfo,&mumps->info);CHKERRQ(ierr); 1445b34f08ffSHong Zhang mumps->ninfo = ninfo; 1446b34f08ffSHong Zhang for (i=0; i<ninfo; i++) { 1447a0e18203SThibaut Appel if (info[i] < 0 || info[i]>80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"index of INFO %d must between 1 and 80\n",ninfo); 14482a808120SBarry Smith else mumps->info[i] = info[i]; 1449b34f08ffSHong Zhang } 1450b34f08ffSHong Zhang } 1451b34f08ffSHong Zhang 14522a808120SBarry Smith ierr = PetscOptionsEnd();CHKERRQ(ierr); 1453dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1454dcd589f8SShri Abhyankar } 1455dcd589f8SShri Abhyankar 1456f697e70eSHong Zhang PetscErrorCode PetscInitializeMUMPS(Mat A,Mat_MUMPS *mumps) 1457dcd589f8SShri Abhyankar { 1458dcd589f8SShri Abhyankar PetscErrorCode ierr; 14597c405c4aSJunchao Zhang PetscInt nthreads=0; 1460dcd589f8SShri Abhyankar 1461dcd589f8SShri Abhyankar PetscFunctionBegin; 14623ab56b82SJunchao Zhang mumps->petsc_comm = PetscObjectComm((PetscObject)A); 14633ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->petsc_comm,&mumps->petsc_size);CHKERRQ(ierr); 14643ab56b82SJunchao Zhang ierr = MPI_Comm_rank(mumps->petsc_comm,&mumps->myid);CHKERRQ(ierr); /* so that code like "if (!myid)" still works even if mumps_comm is different */ 14653ab56b82SJunchao Zhang 14667c405c4aSJunchao Zhang ierr = PetscOptionsHasName(NULL,NULL,"-mat_mumps_use_omp_threads",&mumps->use_petsc_omp_support);CHKERRQ(ierr); 14677c405c4aSJunchao Zhang if (mumps->use_petsc_omp_support) nthreads = -1; /* -1 will let PetscOmpCtrlCreate() guess a proper value when user did not supply one */ 14687c405c4aSJunchao Zhang ierr = PetscOptionsGetInt(NULL,NULL,"-mat_mumps_use_omp_threads",&nthreads,NULL);CHKERRQ(ierr); 14693ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { 14703ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 14713ab56b82SJunchao Zhang ierr = PetscOmpCtrlCreate(mumps->petsc_comm,nthreads,&mumps->omp_ctrl);CHKERRQ(ierr); 14723ab56b82SJunchao Zhang ierr = PetscOmpCtrlGetOmpComms(mumps->omp_ctrl,&mumps->omp_comm,&mumps->mumps_comm,&mumps->is_omp_master);CHKERRQ(ierr); 14733ab56b82SJunchao Zhang #else 1474217d3b1eSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP_SYS,"the system does not have PETSc OpenMP support but you added the -mat_mumps_use_omp_threads option. Configure PETSc with --with-openmp --download-hwloc (or --with-hwloc) to enable it, see more in MATSOLVERMUMPS manual\n"); 14753ab56b82SJunchao Zhang #endif 14763ab56b82SJunchao Zhang } else { 14773ab56b82SJunchao Zhang mumps->omp_comm = PETSC_COMM_SELF; 14783ab56b82SJunchao Zhang mumps->mumps_comm = mumps->petsc_comm; 14793ab56b82SJunchao Zhang mumps->is_omp_master = PETSC_TRUE; 14803ab56b82SJunchao Zhang } 14813ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->omp_comm,&mumps->omp_comm_size);CHKERRQ(ierr); 14822205254eSKarl Rupp 14832d4298aeSJunchao Zhang mumps->id.comm_fortran = MPI_Comm_c2f(mumps->mumps_comm); 1484f697e70eSHong Zhang mumps->id.job = JOB_INIT; 1485f697e70eSHong Zhang mumps->id.par = 1; /* host participates factorizaton and solve */ 1486f697e70eSHong Zhang mumps->id.sym = mumps->sym; 14873ab56b82SJunchao Zhang 14883ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 14893ab56b82SJunchao Zhang 14903ab56b82SJunchao Zhang /* copy MUMPS default control values from master to slaves. Although slaves do not call MUMPS, they may access these values in code. 14913ab56b82SJunchao Zhang For example, ICNTL(9) is initialized to 1 by MUMPS and slaves check ICNTL(9) in MatSolve_MUMPS. 14923ab56b82SJunchao Zhang */ 1493a0e18203SThibaut Appel ierr = MPI_Bcast(mumps->id.icntl,60,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 Manual Section 9 */ 14943ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.cntl, 15,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 1495f697e70eSHong Zhang 14960298fd71SBarry Smith mumps->scat_rhs = NULL; 14970298fd71SBarry Smith mumps->scat_sol = NULL; 14989a2535b5SHong Zhang 149970544d5fSHong Zhang /* set PETSc-MUMPS default options - override MUMPS default */ 15009a2535b5SHong Zhang mumps->id.ICNTL(3) = 0; 15019a2535b5SHong Zhang mumps->id.ICNTL(4) = 0; 15022d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 15039a2535b5SHong Zhang mumps->id.ICNTL(18) = 0; /* centralized assembled matrix input */ 15049a2535b5SHong Zhang } else { 15059a2535b5SHong Zhang mumps->id.ICNTL(18) = 3; /* distributed assembled matrix input */ 15064e34a73bSHong Zhang mumps->id.ICNTL(20) = 0; /* rhs is in dense format */ 150770544d5fSHong Zhang mumps->id.ICNTL(21) = 1; /* distributed solution */ 15089a2535b5SHong Zhang } 15096444a565SStefano Zampini 15106444a565SStefano Zampini /* schur */ 15116444a565SStefano Zampini mumps->id.size_schur = 0; 15126444a565SStefano Zampini mumps->id.listvar_schur = NULL; 15136444a565SStefano Zampini mumps->id.schur = NULL; 1514b5fa320bSStefano Zampini mumps->sizeredrhs = 0; 151559ac8732SStefano Zampini mumps->schur_sol = NULL; 151659ac8732SStefano Zampini mumps->schur_sizesol = 0; 1517dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1518dcd589f8SShri Abhyankar } 1519dcd589f8SShri Abhyankar 15209a625307SHong Zhang PetscErrorCode MatFactorSymbolic_MUMPS_ReportIfError(Mat F,Mat A,const MatFactorInfo *info,Mat_MUMPS *mumps) 15215cd7cf9dSHong Zhang { 15225cd7cf9dSHong Zhang PetscErrorCode ierr; 15235cd7cf9dSHong Zhang 15245cd7cf9dSHong Zhang PetscFunctionBegin; 1525a0e18203SThibaut Appel ierr = MPI_Bcast(mumps->id.infog, 80,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 manual p82 */ 15263ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.rinfog,20,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 15275cd7cf9dSHong Zhang if (mumps->id.INFOG(1) < 0) { 15285cd7cf9dSHong Zhang if (A->erroriffailure) { 15295cd7cf9dSHong Zhang SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in analysis phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 15305cd7cf9dSHong Zhang } else { 15315cd7cf9dSHong Zhang if (mumps->id.INFOG(1) == -6) { 15325cd7cf9dSHong Zhang ierr = PetscInfo2(F,"matrix is singular in structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1533603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_STRUCT_ZEROPIVOT; 15345cd7cf9dSHong Zhang } else if (mumps->id.INFOG(1) == -5 || mumps->id.INFOG(1) == -7) { 15355cd7cf9dSHong Zhang ierr = PetscInfo2(F,"problem of workspace, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1536603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 15375cd7cf9dSHong Zhang } else { 15385cd7cf9dSHong Zhang ierr = PetscInfo2(F,"Error reported by MUMPS in analysis phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1539603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 15405cd7cf9dSHong Zhang } 15415cd7cf9dSHong Zhang } 15425cd7cf9dSHong Zhang } 15435cd7cf9dSHong Zhang PetscFunctionReturn(0); 15445cd7cf9dSHong Zhang } 15455cd7cf9dSHong Zhang 1546a5e57a09SHong Zhang /* Note Petsc r(=c) permutation is used when mumps->id.ICNTL(7)==1 with centralized assembled matrix input; otherwise r and c are ignored */ 15470481f469SBarry Smith PetscErrorCode MatLUFactorSymbolic_AIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1548b24902e0SBarry Smith { 1549e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1550dcd589f8SShri Abhyankar PetscErrorCode ierr; 155167877ebaSShri Abhyankar Vec b; 155267877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1553397b6df1SKris Buschelman 1554397b6df1SKris Buschelman PetscFunctionBegin; 1555a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1556dcd589f8SShri Abhyankar 15579a2535b5SHong Zhang /* Set MUMPS options from the options database */ 15589a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1559dcd589f8SShri Abhyankar 1560a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 15613ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1562dcd589f8SShri Abhyankar 156367877ebaSShri Abhyankar /* analysis phase */ 156467877ebaSShri Abhyankar /*----------------*/ 1565a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1566a5e57a09SHong Zhang mumps->id.n = M; 1567a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 156867877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1569a5e57a09SHong Zhang if (!mumps->myid) { 1570a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1571a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1572940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 157367877ebaSShri Abhyankar } 1574a5e57a09SHong Zhang if (mumps->id.ICNTL(7) == 1) { /* use user-provide matrix ordering - assuming r = c ordering */ 15755248a706SHong Zhang /* 15765248a706SHong Zhang PetscBool flag; 15775248a706SHong Zhang ierr = ISEqual(r,c,&flag);CHKERRQ(ierr); 15785248a706SHong Zhang if (!flag) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"row_perm != col_perm"); 15795248a706SHong Zhang ierr = ISView(r,PETSC_VIEWER_STDOUT_SELF); 15805248a706SHong Zhang */ 1581a5e57a09SHong Zhang if (!mumps->myid) { 1582e0b74bf9SHong Zhang const PetscInt *idx; 1583e0b74bf9SHong Zhang PetscInt i,*perm_in; 15842205254eSKarl Rupp 1585785e854fSJed Brown ierr = PetscMalloc1(M,&perm_in);CHKERRQ(ierr); 1586e0b74bf9SHong Zhang ierr = ISGetIndices(r,&idx);CHKERRQ(ierr); 15872205254eSKarl Rupp 1588a5e57a09SHong Zhang mumps->id.perm_in = perm_in; 1589e0b74bf9SHong Zhang for (i=0; i<M; i++) perm_in[i] = idx[i]+1; /* perm_in[]: start from 1, not 0! */ 1590e0b74bf9SHong Zhang ierr = ISRestoreIndices(r,&idx);CHKERRQ(ierr); 1591e0b74bf9SHong Zhang } 1592e0b74bf9SHong Zhang } 159367877ebaSShri Abhyankar } 159467877ebaSShri Abhyankar break; 159567877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1596a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1597a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1598a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1599940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 160067877ebaSShri Abhyankar } 160167877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 16022a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 160394b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 16046bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 160567877ebaSShri Abhyankar break; 160667877ebaSShri Abhyankar } 16073ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 16085cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 160967877ebaSShri Abhyankar 1610719d5645SBarry Smith F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1611dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 161251d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 16134e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 1614eb3ef3b2SHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 1615b24902e0SBarry Smith PetscFunctionReturn(0); 1616b24902e0SBarry Smith } 1617b24902e0SBarry Smith 1618450b117fSShri Abhyankar /* Note the Petsc r and c permutations are ignored */ 1619450b117fSShri Abhyankar PetscErrorCode MatLUFactorSymbolic_BAIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1620450b117fSShri Abhyankar { 1621e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1622dcd589f8SShri Abhyankar PetscErrorCode ierr; 162367877ebaSShri Abhyankar Vec b; 162467877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1625450b117fSShri Abhyankar 1626450b117fSShri Abhyankar PetscFunctionBegin; 1627a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1628dcd589f8SShri Abhyankar 16299a2535b5SHong Zhang /* Set MUMPS options from the options database */ 16309a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1631dcd589f8SShri Abhyankar 1632a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 16333ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 163467877ebaSShri Abhyankar 163567877ebaSShri Abhyankar /* analysis phase */ 163667877ebaSShri Abhyankar /*----------------*/ 1637a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1638a5e57a09SHong Zhang mumps->id.n = M; 1639a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 164067877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1641a5e57a09SHong Zhang if (!mumps->myid) { 1642a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1643a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1644940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 164567877ebaSShri Abhyankar } 164667877ebaSShri Abhyankar } 164767877ebaSShri Abhyankar break; 164867877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1649a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1650a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1651a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1652940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 165367877ebaSShri Abhyankar } 165467877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 16552a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 165694b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 16576bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 165867877ebaSShri Abhyankar break; 165967877ebaSShri Abhyankar } 16603ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 16615cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 166267877ebaSShri Abhyankar 1663450b117fSShri Abhyankar F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1664dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 166551d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 1666450b117fSShri Abhyankar PetscFunctionReturn(0); 1667450b117fSShri Abhyankar } 1668b24902e0SBarry Smith 1669141f4205SHong Zhang /* Note the Petsc r permutation and factor info are ignored */ 167067877ebaSShri Abhyankar PetscErrorCode MatCholeskyFactorSymbolic_MUMPS(Mat F,Mat A,IS r,const MatFactorInfo *info) 1671b24902e0SBarry Smith { 1672e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1673dcd589f8SShri Abhyankar PetscErrorCode ierr; 167467877ebaSShri Abhyankar Vec b; 167567877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1676397b6df1SKris Buschelman 1677397b6df1SKris Buschelman PetscFunctionBegin; 1678a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1679dcd589f8SShri Abhyankar 16809a2535b5SHong Zhang /* Set MUMPS options from the options database */ 16819a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1682dcd589f8SShri Abhyankar 1683a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 16843ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1685dcd589f8SShri Abhyankar 168667877ebaSShri Abhyankar /* analysis phase */ 168767877ebaSShri Abhyankar /*----------------*/ 1688a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1689a5e57a09SHong Zhang mumps->id.n = M; 1690a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 169167877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1692a5e57a09SHong Zhang if (!mumps->myid) { 1693a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1694a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1695940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 169667877ebaSShri Abhyankar } 169767877ebaSShri Abhyankar } 169867877ebaSShri Abhyankar break; 169967877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1700a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1701a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1702a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1703940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 170467877ebaSShri Abhyankar } 170567877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 17062a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 170794b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 17086bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 170967877ebaSShri Abhyankar break; 171067877ebaSShri Abhyankar } 17113ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 17125cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 17135cd7cf9dSHong Zhang 17142792810eSHong Zhang F->ops->choleskyfactornumeric = MatFactorNumeric_MUMPS; 1715dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 171651d5961aSHong Zhang F->ops->solvetranspose = MatSolve_MUMPS; 17174e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 171823a5080aSHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 17194e34a73bSHong Zhang #if defined(PETSC_USE_COMPLEX) 17200298fd71SBarry Smith F->ops->getinertia = NULL; 17214e34a73bSHong Zhang #else 17224e34a73bSHong Zhang F->ops->getinertia = MatGetInertia_SBAIJMUMPS; 1723db4efbfdSBarry Smith #endif 1724b24902e0SBarry Smith PetscFunctionReturn(0); 1725b24902e0SBarry Smith } 1726b24902e0SBarry Smith 172764e6c443SBarry Smith PetscErrorCode MatView_MUMPS(Mat A,PetscViewer viewer) 172874ed9c26SBarry Smith { 1729f6c57405SHong Zhang PetscErrorCode ierr; 173064e6c443SBarry Smith PetscBool iascii; 173164e6c443SBarry Smith PetscViewerFormat format; 1732e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 1733f6c57405SHong Zhang 1734f6c57405SHong Zhang PetscFunctionBegin; 173564e6c443SBarry Smith /* check if matrix is mumps type */ 173664e6c443SBarry Smith if (A->ops->solve != MatSolve_MUMPS) PetscFunctionReturn(0); 173764e6c443SBarry Smith 1738251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 173964e6c443SBarry Smith if (iascii) { 174064e6c443SBarry Smith ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 174164e6c443SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO) { 174264e6c443SBarry Smith ierr = PetscViewerASCIIPrintf(viewer,"MUMPS run parameters:\n");CHKERRQ(ierr); 1743a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," SYM (matrix type): %d \n",mumps->id.sym);CHKERRQ(ierr); 1744a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," PAR (host participation): %d \n",mumps->id.par);CHKERRQ(ierr); 1745a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(1) (output for error): %d \n",mumps->id.ICNTL(1));CHKERRQ(ierr); 1746a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(2) (output of diagnostic msg): %d \n",mumps->id.ICNTL(2));CHKERRQ(ierr); 1747a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(3) (output for global info): %d \n",mumps->id.ICNTL(3));CHKERRQ(ierr); 1748a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(4) (level of printing): %d \n",mumps->id.ICNTL(4));CHKERRQ(ierr); 1749a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(5) (input mat struct): %d \n",mumps->id.ICNTL(5));CHKERRQ(ierr); 1750a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(6) (matrix prescaling): %d \n",mumps->id.ICNTL(6));CHKERRQ(ierr); 1751d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(7) (sequential matrix ordering):%d \n",mumps->id.ICNTL(7));CHKERRQ(ierr); 1752d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(8) (scaling strategy): %d \n",mumps->id.ICNTL(8));CHKERRQ(ierr); 1753a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(10) (max num of refinements): %d \n",mumps->id.ICNTL(10));CHKERRQ(ierr); 1754a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(11) (error analysis): %d \n",mumps->id.ICNTL(11));CHKERRQ(ierr); 1755a5e57a09SHong Zhang if (mumps->id.ICNTL(11)>0) { 1756a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(4) (inf norm of input mat): %g\n",mumps->id.RINFOG(4));CHKERRQ(ierr); 1757a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(5) (inf norm of solution): %g\n",mumps->id.RINFOG(5));CHKERRQ(ierr); 1758a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(6) (inf norm of residual): %g\n",mumps->id.RINFOG(6));CHKERRQ(ierr); 1759a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(7),RINFOG(8) (backward error est): %g, %g\n",mumps->id.RINFOG(7),mumps->id.RINFOG(8));CHKERRQ(ierr); 1760a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(9) (error estimate): %g \n",mumps->id.RINFOG(9));CHKERRQ(ierr); 1761a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(10),RINFOG(11)(condition numbers): %g, %g\n",mumps->id.RINFOG(10),mumps->id.RINFOG(11));CHKERRQ(ierr); 1762f6c57405SHong Zhang } 1763a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(12) (efficiency control): %d \n",mumps->id.ICNTL(12));CHKERRQ(ierr); 1764a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(13) (efficiency control): %d \n",mumps->id.ICNTL(13));CHKERRQ(ierr); 1765a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(14) (percentage of estimated workspace increase): %d \n",mumps->id.ICNTL(14));CHKERRQ(ierr); 1766f6c57405SHong Zhang /* ICNTL(15-17) not used */ 1767a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(18) (input mat struct): %d \n",mumps->id.ICNTL(18));CHKERRQ(ierr); 1768d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(19) (Schur complement info): %d \n",mumps->id.ICNTL(19));CHKERRQ(ierr); 1769a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(20) (rhs sparse pattern): %d \n",mumps->id.ICNTL(20));CHKERRQ(ierr); 1770ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," ICNTL(21) (solution struct): %d \n",mumps->id.ICNTL(21));CHKERRQ(ierr); 1771a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(22) (in-core/out-of-core facility): %d \n",mumps->id.ICNTL(22));CHKERRQ(ierr); 1772a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(23) (max size of memory can be allocated locally):%d \n",mumps->id.ICNTL(23));CHKERRQ(ierr); 1773c0165424SHong Zhang 1774a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(24) (detection of null pivot rows): %d \n",mumps->id.ICNTL(24));CHKERRQ(ierr); 1775a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(25) (computation of a null space basis): %d \n",mumps->id.ICNTL(25));CHKERRQ(ierr); 1776a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(26) (Schur options for rhs or solution): %d \n",mumps->id.ICNTL(26));CHKERRQ(ierr); 1777a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(27) (experimental parameter): %d \n",mumps->id.ICNTL(27));CHKERRQ(ierr); 1778a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(28) (use parallel or sequential ordering): %d \n",mumps->id.ICNTL(28));CHKERRQ(ierr); 1779a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(29) (parallel ordering): %d \n",mumps->id.ICNTL(29));CHKERRQ(ierr); 178042179a6aSHong Zhang 1781a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(30) (user-specified set of entries in inv(A)): %d \n",mumps->id.ICNTL(30));CHKERRQ(ierr); 1782a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(31) (factors is discarded in the solve phase): %d \n",mumps->id.ICNTL(31));CHKERRQ(ierr); 1783a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(33) (compute determinant): %d \n",mumps->id.ICNTL(33));CHKERRQ(ierr); 17846e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(35) (activate BLR based factorization): %d \n",mumps->id.ICNTL(35));CHKERRQ(ierr); 1785a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(36) (choice of BLR factorization variant): %d \n",mumps->id.ICNTL(36));CHKERRQ(ierr); 1786a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(38) (estimated compression rate of LU factors): %d \n",mumps->id.ICNTL(38));CHKERRQ(ierr); 1787f6c57405SHong Zhang 1788a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(1) (relative pivoting threshold): %g \n",mumps->id.CNTL(1));CHKERRQ(ierr); 1789a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(2) (stopping criterion of refinement): %g \n",mumps->id.CNTL(2));CHKERRQ(ierr); 1790ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(3) (absolute pivoting threshold): %g \n",mumps->id.CNTL(3));CHKERRQ(ierr); 1791ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(4) (value of static pivoting): %g \n",mumps->id.CNTL(4));CHKERRQ(ierr); 1792a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(5) (fixation for null pivots): %g \n",mumps->id.CNTL(5));CHKERRQ(ierr); 17936e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(7) (dropping parameter for BLR): %g \n",mumps->id.CNTL(7));CHKERRQ(ierr); 1794f6c57405SHong Zhang 1795f6c57405SHong Zhang /* infomation local to each processor */ 179634ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(1) (local estimated flops for the elimination after analysis): \n");CHKERRQ(ierr); 17971575c14dSBarry Smith ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr); 1798a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(1));CHKERRQ(ierr); 17992a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 180034ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(2) (local estimated flops for the assembly after factorization): \n");CHKERRQ(ierr); 1801a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(2));CHKERRQ(ierr); 18022a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 180334ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(3) (local estimated flops for the elimination after factorization): \n");CHKERRQ(ierr); 1804a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(3));CHKERRQ(ierr); 18052a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1806f6c57405SHong Zhang 180734ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(15) (estimated size of (in MB) MUMPS internal data for running numerical factorization): \n");CHKERRQ(ierr); 1808a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(15));CHKERRQ(ierr); 18092a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1810f6c57405SHong Zhang 181134ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(16) (size of (in MB) MUMPS internal data used during numerical factorization): \n");CHKERRQ(ierr); 1812a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(16));CHKERRQ(ierr); 18132a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1814f6c57405SHong Zhang 181534ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(23) (num of pivots eliminated on this processor after factorization): \n");CHKERRQ(ierr); 1816a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(23));CHKERRQ(ierr); 18172a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1818b34f08ffSHong Zhang 1819a0e18203SThibaut Appel if (mumps->ninfo && mumps->ninfo <= 80){ 1820b34f08ffSHong Zhang PetscInt i; 1821b34f08ffSHong Zhang for (i=0; i<mumps->ninfo; i++){ 1822b34f08ffSHong Zhang ierr = PetscViewerASCIIPrintf(viewer, " INFO(%d): \n",mumps->info[i]);CHKERRQ(ierr); 1823b34f08ffSHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(mumps->info[i]));CHKERRQ(ierr); 18242a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1825b34f08ffSHong Zhang } 1826b34f08ffSHong Zhang } 18271575c14dSBarry Smith ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr); 1828f6c57405SHong Zhang 1829a5e57a09SHong Zhang if (!mumps->myid) { /* information from the host */ 1830a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(1) (global estimated flops for the elimination after analysis): %g \n",mumps->id.RINFOG(1));CHKERRQ(ierr); 1831a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(2) (global estimated flops for the assembly after factorization): %g \n",mumps->id.RINFOG(2));CHKERRQ(ierr); 1832a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(3) (global estimated flops for the elimination after factorization): %g \n",mumps->id.RINFOG(3));CHKERRQ(ierr); 1833a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," (RINFOG(12) RINFOG(13))*2^INFOG(34) (determinant): (%g,%g)*(2^%d)\n",mumps->id.RINFOG(12),mumps->id.RINFOG(13),mumps->id.INFOG(34));CHKERRQ(ierr); 1834f6c57405SHong Zhang 1835a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(3) (estimated real workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(3));CHKERRQ(ierr); 1836a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(4) (estimated integer workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(4));CHKERRQ(ierr); 1837a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(5) (estimated maximum front size in the complete tree): %d \n",mumps->id.INFOG(5));CHKERRQ(ierr); 1838a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(6) (number of nodes in the complete tree): %d \n",mumps->id.INFOG(6));CHKERRQ(ierr); 1839a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(7) (ordering option effectively use after analysis): %d \n",mumps->id.INFOG(7));CHKERRQ(ierr); 1840a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(8) (structural symmetry in percent of the permuted matrix after analysis): %d \n",mumps->id.INFOG(8));CHKERRQ(ierr); 1841a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(9) (total real/complex workspace to store the matrix factors after factorization): %d \n",mumps->id.INFOG(9));CHKERRQ(ierr); 1842a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(10) (total integer space store the matrix factors after factorization): %d \n",mumps->id.INFOG(10));CHKERRQ(ierr); 1843a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(11) (order of largest frontal matrix after factorization): %d \n",mumps->id.INFOG(11));CHKERRQ(ierr); 1844a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(12) (number of off-diagonal pivots): %d \n",mumps->id.INFOG(12));CHKERRQ(ierr); 1845a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(13) (number of delayed pivots after factorization): %d \n",mumps->id.INFOG(13));CHKERRQ(ierr); 1846a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(14) (number of memory compress after factorization): %d \n",mumps->id.INFOG(14));CHKERRQ(ierr); 1847a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(15) (number of steps of iterative refinement after solution): %d \n",mumps->id.INFOG(15));CHKERRQ(ierr); 1848a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(16) (estimated size (in MB) of all MUMPS internal data for factorization after analysis: value on the most memory consuming processor): %d \n",mumps->id.INFOG(16));CHKERRQ(ierr); 1849a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(17) (estimated size of all MUMPS internal data for factorization after analysis: sum over all processors): %d \n",mumps->id.INFOG(17));CHKERRQ(ierr); 1850a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(18) (size of all MUMPS internal data allocated during factorization: value on the most memory consuming processor): %d \n",mumps->id.INFOG(18));CHKERRQ(ierr); 1851a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(19) (size of all MUMPS internal data allocated during factorization: sum over all processors): %d \n",mumps->id.INFOG(19));CHKERRQ(ierr); 1852a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(20) (estimated number of entries in the factors): %d \n",mumps->id.INFOG(20));CHKERRQ(ierr); 1853a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(21) (size in MB of memory effectively used during factorization - value on the most memory consuming processor): %d \n",mumps->id.INFOG(21));CHKERRQ(ierr); 1854a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(22) (size in MB of memory effectively used during factorization - sum over all processors): %d \n",mumps->id.INFOG(22));CHKERRQ(ierr); 1855a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(23) (after analysis: value of ICNTL(6) effectively used): %d \n",mumps->id.INFOG(23));CHKERRQ(ierr); 1856a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(24) (after analysis: value of ICNTL(12) effectively used): %d \n",mumps->id.INFOG(24));CHKERRQ(ierr); 1857a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(25) (after factorization: number of pivots modified by static pivoting): %d \n",mumps->id.INFOG(25));CHKERRQ(ierr); 185840d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(28) (after factorization: number of null pivots encountered): %d\n",mumps->id.INFOG(28));CHKERRQ(ierr); 185940d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(29) (after factorization: effective number of entries in the factors (sum over all processors)): %d\n",mumps->id.INFOG(29));CHKERRQ(ierr); 186040d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(30, 31) (after solution: size in Mbytes of memory used during solution phase): %d, %d\n",mumps->id.INFOG(30),mumps->id.INFOG(31));CHKERRQ(ierr); 186140d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(32) (after analysis: type of analysis done): %d\n",mumps->id.INFOG(32));CHKERRQ(ierr); 186240d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(33) (value used for ICNTL(8)): %d\n",mumps->id.INFOG(33));CHKERRQ(ierr); 186340d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(34) (exponent of the determinant if determinant is requested): %d\n",mumps->id.INFOG(34));CHKERRQ(ierr); 1864a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(35) (after factorization: number of entries taking into account BLR factor compression - sum over all processors): %d\n",mumps->id.INFOG(35));CHKERRQ(ierr); 1865a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(36) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(36));CHKERRQ(ierr); 1866a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(37) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - sum over all processors): %d \n",mumps->id.INFOG(37));CHKERRQ(ierr); 1867a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(38) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(38));CHKERRQ(ierr); 1868a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(39) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - sum over all processors): %d \n",mumps->id.INFOG(39));CHKERRQ(ierr); 1869f6c57405SHong Zhang } 1870f6c57405SHong Zhang } 1871cb828f0fSHong Zhang } 1872f6c57405SHong Zhang PetscFunctionReturn(0); 1873f6c57405SHong Zhang } 1874f6c57405SHong Zhang 187535bd34faSBarry Smith PetscErrorCode MatGetInfo_MUMPS(Mat A,MatInfoType flag,MatInfo *info) 187635bd34faSBarry Smith { 1877e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)A->data; 187835bd34faSBarry Smith 187935bd34faSBarry Smith PetscFunctionBegin; 188035bd34faSBarry Smith info->block_size = 1.0; 1881cb828f0fSHong Zhang info->nz_allocated = mumps->id.INFOG(20); 1882cb828f0fSHong Zhang info->nz_used = mumps->id.INFOG(20); 188335bd34faSBarry Smith info->nz_unneeded = 0.0; 188435bd34faSBarry Smith info->assemblies = 0.0; 188535bd34faSBarry Smith info->mallocs = 0.0; 188635bd34faSBarry Smith info->memory = 0.0; 188735bd34faSBarry Smith info->fill_ratio_given = 0; 188835bd34faSBarry Smith info->fill_ratio_needed = 0; 188935bd34faSBarry Smith info->factor_mallocs = 0; 189035bd34faSBarry Smith PetscFunctionReturn(0); 189135bd34faSBarry Smith } 189235bd34faSBarry Smith 18935ccb76cbSHong Zhang /* -------------------------------------------------------------------------------------------*/ 18948e7ba810SStefano Zampini PetscErrorCode MatFactorSetSchurIS_MUMPS(Mat F, IS is) 18956444a565SStefano Zampini { 1896e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 18978e7ba810SStefano Zampini const PetscInt *idxs; 18988e7ba810SStefano Zampini PetscInt size,i; 18996444a565SStefano Zampini PetscErrorCode ierr; 19006444a565SStefano Zampini 19016444a565SStefano Zampini PetscFunctionBegin; 1902b3cb21ddSStefano Zampini ierr = ISGetLocalSize(is,&size);CHKERRQ(ierr); 19032d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 19043ab56b82SJunchao Zhang PetscBool ls,gs; /* gs is false if any rank other than root has non-empty IS */ 1905241dbb5eSStefano Zampini 19063ab56b82SJunchao Zhang ls = mumps->myid ? (size ? PETSC_FALSE : PETSC_TRUE) : PETSC_TRUE; /* always true on root; false on others if their size != 0 */ 19073ab56b82SJunchao Zhang ierr = MPI_Allreduce(&ls,&gs,1,MPIU_BOOL,MPI_LAND,mumps->petsc_comm);CHKERRQ(ierr); 1908241dbb5eSStefano Zampini if (!gs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MUMPS distributed parallel Schur complements not yet supported from PETSc\n"); 1909241dbb5eSStefano Zampini } 19106444a565SStefano Zampini if (mumps->id.size_schur != size) { 19116444a565SStefano Zampini ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr); 19126444a565SStefano Zampini mumps->id.size_schur = size; 19136444a565SStefano Zampini mumps->id.schur_lld = size; 19146444a565SStefano Zampini ierr = PetscMalloc2(size,&mumps->id.listvar_schur,size*size,&mumps->id.schur);CHKERRQ(ierr); 19156444a565SStefano Zampini } 1916b3cb21ddSStefano Zampini 1917b3cb21ddSStefano Zampini /* Schur complement matrix */ 1918b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.size_schur,(PetscScalar*)mumps->id.schur,&F->schur);CHKERRQ(ierr); 1919b3cb21ddSStefano Zampini if (mumps->sym == 1) { 1920b3cb21ddSStefano Zampini ierr = MatSetOption(F->schur,MAT_SPD,PETSC_TRUE);CHKERRQ(ierr); 1921b3cb21ddSStefano Zampini } 1922b3cb21ddSStefano Zampini 1923b3cb21ddSStefano Zampini /* MUMPS expects Fortran style indices */ 19248e7ba810SStefano Zampini ierr = ISGetIndices(is,&idxs);CHKERRQ(ierr); 1925580bdb30SBarry Smith ierr = PetscArraycpy(mumps->id.listvar_schur,idxs,size);CHKERRQ(ierr); 19268e7ba810SStefano Zampini for (i=0;i<size;i++) mumps->id.listvar_schur[i]++; 19278e7ba810SStefano Zampini ierr = ISRestoreIndices(is,&idxs);CHKERRQ(ierr); 19282d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 1929241dbb5eSStefano Zampini mumps->id.ICNTL(19) = 1; /* MUMPS returns Schur centralized on the host */ 1930241dbb5eSStefano Zampini } else { 19316444a565SStefano Zampini if (F->factortype == MAT_FACTOR_LU) { 193259ac8732SStefano Zampini mumps->id.ICNTL(19) = 3; /* MUMPS returns full matrix */ 19336444a565SStefano Zampini } else { 193459ac8732SStefano Zampini mumps->id.ICNTL(19) = 2; /* MUMPS returns lower triangular part */ 19356444a565SStefano Zampini } 1936241dbb5eSStefano Zampini } 193759ac8732SStefano Zampini /* set a special value of ICNTL (not handled my MUMPS) to be used in the solve phase by PETSc */ 1938b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 19396444a565SStefano Zampini PetscFunctionReturn(0); 19406444a565SStefano Zampini } 194159ac8732SStefano Zampini 19426444a565SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 19435a05ddb0SStefano Zampini PetscErrorCode MatFactorCreateSchurComplement_MUMPS(Mat F,Mat* S) 19446444a565SStefano Zampini { 19456444a565SStefano Zampini Mat St; 1946e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 19476444a565SStefano Zampini PetscScalar *array; 19486444a565SStefano Zampini #if defined(PETSC_USE_COMPLEX) 19498ac429a0SStefano Zampini PetscScalar im = PetscSqrtScalar((PetscScalar)-1.0); 19506444a565SStefano Zampini #endif 19516444a565SStefano Zampini PetscErrorCode ierr; 19526444a565SStefano Zampini 19536444a565SStefano Zampini PetscFunctionBegin; 19545a05ddb0SStefano Zampini if (!mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it"); 1955241dbb5eSStefano Zampini ierr = MatCreate(PETSC_COMM_SELF,&St);CHKERRQ(ierr); 19566444a565SStefano Zampini ierr = MatSetSizes(St,PETSC_DECIDE,PETSC_DECIDE,mumps->id.size_schur,mumps->id.size_schur);CHKERRQ(ierr); 19576444a565SStefano Zampini ierr = MatSetType(St,MATDENSE);CHKERRQ(ierr); 19586444a565SStefano Zampini ierr = MatSetUp(St);CHKERRQ(ierr); 19596444a565SStefano Zampini ierr = MatDenseGetArray(St,&array);CHKERRQ(ierr); 196059ac8732SStefano Zampini if (!mumps->sym) { /* MUMPS always return a full matrix */ 19616444a565SStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 19626444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19636444a565SStefano Zampini for (i=0;i<N;i++) { 19646444a565SStefano Zampini for (j=0;j<N;j++) { 19656444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19666444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19676444a565SStefano Zampini #else 19686444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19696444a565SStefano Zampini #endif 19706444a565SStefano Zampini array[j*N+i] = val; 19716444a565SStefano Zampini } 19726444a565SStefano Zampini } 19736444a565SStefano Zampini } else { /* stored by columns */ 1974580bdb30SBarry Smith ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr); 19756444a565SStefano Zampini } 19766444a565SStefano Zampini } else { /* either full or lower-triangular (not packed) */ 19776444a565SStefano Zampini if (mumps->id.ICNTL(19) == 2) { /* lower triangular stored by columns */ 19786444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19796444a565SStefano Zampini for (i=0;i<N;i++) { 19806444a565SStefano Zampini for (j=i;j<N;j++) { 19816444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19826444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19836444a565SStefano Zampini #else 19846444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19856444a565SStefano Zampini #endif 19866444a565SStefano Zampini array[i*N+j] = val; 19876444a565SStefano Zampini array[j*N+i] = val; 19886444a565SStefano Zampini } 19896444a565SStefano Zampini } 19906444a565SStefano Zampini } else if (mumps->id.ICNTL(19) == 3) { /* full matrix */ 1991580bdb30SBarry Smith ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr); 19926444a565SStefano Zampini } else { /* ICNTL(19) == 1 lower triangular stored by rows */ 19936444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19946444a565SStefano Zampini for (i=0;i<N;i++) { 19956444a565SStefano Zampini for (j=0;j<i+1;j++) { 19966444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19976444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19986444a565SStefano Zampini #else 19996444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 20006444a565SStefano Zampini #endif 20016444a565SStefano Zampini array[i*N+j] = val; 20026444a565SStefano Zampini array[j*N+i] = val; 20036444a565SStefano Zampini } 20046444a565SStefano Zampini } 20056444a565SStefano Zampini } 20066444a565SStefano Zampini } 20076444a565SStefano Zampini ierr = MatDenseRestoreArray(St,&array);CHKERRQ(ierr); 20086444a565SStefano Zampini *S = St; 20096444a565SStefano Zampini PetscFunctionReturn(0); 20106444a565SStefano Zampini } 20116444a565SStefano Zampini 201259ac8732SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 20135ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt ival) 20145ccb76cbSHong Zhang { 2015e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 20165ccb76cbSHong Zhang 20175ccb76cbSHong Zhang PetscFunctionBegin; 2018a5e57a09SHong Zhang mumps->id.ICNTL(icntl) = ival; 20195ccb76cbSHong Zhang PetscFunctionReturn(0); 20205ccb76cbSHong Zhang } 20215ccb76cbSHong Zhang 2022bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt *ival) 2023bc6112feSHong Zhang { 2024e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2025bc6112feSHong Zhang 2026bc6112feSHong Zhang PetscFunctionBegin; 2027bc6112feSHong Zhang *ival = mumps->id.ICNTL(icntl); 2028bc6112feSHong Zhang PetscFunctionReturn(0); 2029bc6112feSHong Zhang } 2030bc6112feSHong Zhang 20315ccb76cbSHong Zhang /*@ 20325ccb76cbSHong Zhang MatMumpsSetIcntl - Set MUMPS parameter ICNTL() 20335ccb76cbSHong Zhang 20345ccb76cbSHong Zhang Logically Collective on Mat 20355ccb76cbSHong Zhang 20365ccb76cbSHong Zhang Input Parameters: 20375ccb76cbSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 20385ccb76cbSHong Zhang . icntl - index of MUMPS parameter array ICNTL() 20395ccb76cbSHong Zhang - ival - value of MUMPS ICNTL(icntl) 20405ccb76cbSHong Zhang 20415ccb76cbSHong Zhang Options Database: 20425ccb76cbSHong Zhang . -mat_mumps_icntl_<icntl> <ival> 20435ccb76cbSHong Zhang 20445ccb76cbSHong Zhang Level: beginner 20455ccb76cbSHong Zhang 204696a0c994SBarry Smith References: 204796a0c994SBarry Smith . MUMPS Users' Guide 20485ccb76cbSHong Zhang 20499fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 20505ccb76cbSHong Zhang @*/ 20515ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl(Mat F,PetscInt icntl,PetscInt ival) 20525ccb76cbSHong Zhang { 20535ccb76cbSHong Zhang PetscErrorCode ierr; 20545ccb76cbSHong Zhang 20555ccb76cbSHong Zhang PetscFunctionBegin; 20562989dfd4SHong Zhang PetscValidType(F,1); 20572989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 20585ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 20595ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,ival,3); 20605ccb76cbSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetIcntl_C",(Mat,PetscInt,PetscInt),(F,icntl,ival));CHKERRQ(ierr); 20615ccb76cbSHong Zhang PetscFunctionReturn(0); 20625ccb76cbSHong Zhang } 20635ccb76cbSHong Zhang 2064a21f80fcSHong Zhang /*@ 2065a21f80fcSHong Zhang MatMumpsGetIcntl - Get MUMPS parameter ICNTL() 2066a21f80fcSHong Zhang 2067a21f80fcSHong Zhang Logically Collective on Mat 2068a21f80fcSHong Zhang 2069a21f80fcSHong Zhang Input Parameters: 2070a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2071a21f80fcSHong Zhang - icntl - index of MUMPS parameter array ICNTL() 2072a21f80fcSHong Zhang 2073a21f80fcSHong Zhang Output Parameter: 2074a21f80fcSHong Zhang . ival - value of MUMPS ICNTL(icntl) 2075a21f80fcSHong Zhang 2076a21f80fcSHong Zhang Level: beginner 2077a21f80fcSHong Zhang 207896a0c994SBarry Smith References: 207996a0c994SBarry Smith . MUMPS Users' Guide 2080a21f80fcSHong Zhang 20819fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2082a21f80fcSHong Zhang @*/ 2083bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl(Mat F,PetscInt icntl,PetscInt *ival) 2084bc6112feSHong Zhang { 2085bc6112feSHong Zhang PetscErrorCode ierr; 2086bc6112feSHong Zhang 2087bc6112feSHong Zhang PetscFunctionBegin; 20882989dfd4SHong Zhang PetscValidType(F,1); 20892989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2090bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2091bc6112feSHong Zhang PetscValidIntPointer(ival,3); 20922989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetIcntl_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2093bc6112feSHong Zhang PetscFunctionReturn(0); 2094bc6112feSHong Zhang } 2095bc6112feSHong Zhang 20968928b65cSHong Zhang /* -------------------------------------------------------------------------------------------*/ 20978928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal val) 20988928b65cSHong Zhang { 2099e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 21008928b65cSHong Zhang 21018928b65cSHong Zhang PetscFunctionBegin; 21028928b65cSHong Zhang mumps->id.CNTL(icntl) = val; 21038928b65cSHong Zhang PetscFunctionReturn(0); 21048928b65cSHong Zhang } 21058928b65cSHong Zhang 2106bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal *val) 2107bc6112feSHong Zhang { 2108e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2109bc6112feSHong Zhang 2110bc6112feSHong Zhang PetscFunctionBegin; 2111bc6112feSHong Zhang *val = mumps->id.CNTL(icntl); 2112bc6112feSHong Zhang PetscFunctionReturn(0); 2113bc6112feSHong Zhang } 2114bc6112feSHong Zhang 21158928b65cSHong Zhang /*@ 21168928b65cSHong Zhang MatMumpsSetCntl - Set MUMPS parameter CNTL() 21178928b65cSHong Zhang 21188928b65cSHong Zhang Logically Collective on Mat 21198928b65cSHong Zhang 21208928b65cSHong Zhang Input Parameters: 21218928b65cSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 21228928b65cSHong Zhang . icntl - index of MUMPS parameter array CNTL() 21238928b65cSHong Zhang - val - value of MUMPS CNTL(icntl) 21248928b65cSHong Zhang 21258928b65cSHong Zhang Options Database: 21268928b65cSHong Zhang . -mat_mumps_cntl_<icntl> <val> 21278928b65cSHong Zhang 21288928b65cSHong Zhang Level: beginner 21298928b65cSHong Zhang 213096a0c994SBarry Smith References: 213196a0c994SBarry Smith . MUMPS Users' Guide 21328928b65cSHong Zhang 21339fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 21348928b65cSHong Zhang @*/ 21358928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl(Mat F,PetscInt icntl,PetscReal val) 21368928b65cSHong Zhang { 21378928b65cSHong Zhang PetscErrorCode ierr; 21388928b65cSHong Zhang 21398928b65cSHong Zhang PetscFunctionBegin; 21402989dfd4SHong Zhang PetscValidType(F,1); 21412989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 21428928b65cSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2143bc6112feSHong Zhang PetscValidLogicalCollectiveReal(F,val,3); 21448928b65cSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetCntl_C",(Mat,PetscInt,PetscReal),(F,icntl,val));CHKERRQ(ierr); 21458928b65cSHong Zhang PetscFunctionReturn(0); 21468928b65cSHong Zhang } 21478928b65cSHong Zhang 2148a21f80fcSHong Zhang /*@ 2149a21f80fcSHong Zhang MatMumpsGetCntl - Get MUMPS parameter CNTL() 2150a21f80fcSHong Zhang 2151a21f80fcSHong Zhang Logically Collective on Mat 2152a21f80fcSHong Zhang 2153a21f80fcSHong Zhang Input Parameters: 2154a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2155a21f80fcSHong Zhang - icntl - index of MUMPS parameter array CNTL() 2156a21f80fcSHong Zhang 2157a21f80fcSHong Zhang Output Parameter: 2158a21f80fcSHong Zhang . val - value of MUMPS CNTL(icntl) 2159a21f80fcSHong Zhang 2160a21f80fcSHong Zhang Level: beginner 2161a21f80fcSHong Zhang 216296a0c994SBarry Smith References: 216396a0c994SBarry Smith . MUMPS Users' Guide 2164a21f80fcSHong Zhang 21659fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2166a21f80fcSHong Zhang @*/ 2167bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl(Mat F,PetscInt icntl,PetscReal *val) 2168bc6112feSHong Zhang { 2169bc6112feSHong Zhang PetscErrorCode ierr; 2170bc6112feSHong Zhang 2171bc6112feSHong Zhang PetscFunctionBegin; 21722989dfd4SHong Zhang PetscValidType(F,1); 21732989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2174bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2175bc6112feSHong Zhang PetscValidRealPointer(val,3); 21762989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetCntl_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2177bc6112feSHong Zhang PetscFunctionReturn(0); 2178bc6112feSHong Zhang } 2179bc6112feSHong Zhang 2180ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo_MUMPS(Mat F,PetscInt icntl,PetscInt *info) 2181bc6112feSHong Zhang { 2182e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2183bc6112feSHong Zhang 2184bc6112feSHong Zhang PetscFunctionBegin; 2185bc6112feSHong Zhang *info = mumps->id.INFO(icntl); 2186bc6112feSHong Zhang PetscFunctionReturn(0); 2187bc6112feSHong Zhang } 2188bc6112feSHong Zhang 2189ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog_MUMPS(Mat F,PetscInt icntl,PetscInt *infog) 2190bc6112feSHong Zhang { 2191e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2192bc6112feSHong Zhang 2193bc6112feSHong Zhang PetscFunctionBegin; 2194bc6112feSHong Zhang *infog = mumps->id.INFOG(icntl); 2195bc6112feSHong Zhang PetscFunctionReturn(0); 2196bc6112feSHong Zhang } 2197bc6112feSHong Zhang 2198ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfo) 2199bc6112feSHong Zhang { 2200e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2201bc6112feSHong Zhang 2202bc6112feSHong Zhang PetscFunctionBegin; 2203bc6112feSHong Zhang *rinfo = mumps->id.RINFO(icntl); 2204bc6112feSHong Zhang PetscFunctionReturn(0); 2205bc6112feSHong Zhang } 2206bc6112feSHong Zhang 2207ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfog) 2208bc6112feSHong Zhang { 2209e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2210bc6112feSHong Zhang 2211bc6112feSHong Zhang PetscFunctionBegin; 2212bc6112feSHong Zhang *rinfog = mumps->id.RINFOG(icntl); 2213bc6112feSHong Zhang PetscFunctionReturn(0); 2214bc6112feSHong Zhang } 2215bc6112feSHong Zhang 221689a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse_MUMPS(Mat F,Mat spRHS) 2217bb599dfdSHong Zhang { 2218bb599dfdSHong Zhang PetscErrorCode ierr; 22190e6b8875SHong Zhang Mat Bt = NULL,Btseq = NULL; 22200e6b8875SHong Zhang PetscBool flg; 2221bb599dfdSHong Zhang Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2222bb599dfdSHong Zhang PetscScalar *aa; 2223bb599dfdSHong Zhang PetscInt spnr,*ia,*ja; 2224bb599dfdSHong Zhang 2225bb599dfdSHong Zhang PetscFunctionBegin; 2226e3f2db6aSHong Zhang PetscValidIntPointer(spRHS,2); 22270e6b8875SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)spRHS,MATTRANSPOSEMAT,&flg);CHKERRQ(ierr); 22280e6b8875SHong Zhang if (flg) { 2229bb599dfdSHong Zhang ierr = MatTransposeGetMat(spRHS,&Bt);CHKERRQ(ierr); 22300e6b8875SHong Zhang } else SETERRQ(PetscObjectComm((PetscObject)spRHS),PETSC_ERR_ARG_WRONG,"Matrix spRHS must be type MATTRANSPOSEMAT matrix"); 2231bb599dfdSHong Zhang 2232bb599dfdSHong Zhang ierr = MatMumpsSetIcntl(F,30,1);CHKERRQ(ierr); 2233bb599dfdSHong Zhang 22342d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 22350e6b8875SHong Zhang Mat_MPIAIJ *b = (Mat_MPIAIJ*)Bt->data; 22360e6b8875SHong Zhang Btseq = b->A; 22370e6b8875SHong Zhang } else { 22380e6b8875SHong Zhang Btseq = Bt; 22390e6b8875SHong Zhang } 22400e6b8875SHong Zhang 2241e3f2db6aSHong Zhang if (!mumps->myid) { 22420e6b8875SHong Zhang ierr = MatSeqAIJGetArray(Btseq,&aa);CHKERRQ(ierr); 22430e6b8875SHong Zhang ierr = MatGetRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 22440e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2245bb599dfdSHong Zhang 2246bb599dfdSHong Zhang mumps->id.irhs_ptr = ia; 2247bb599dfdSHong Zhang mumps->id.irhs_sparse = ja; 2248bb599dfdSHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 2249bb599dfdSHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 2250e3f2db6aSHong Zhang } else { 2251e3f2db6aSHong Zhang mumps->id.irhs_ptr = NULL; 2252e3f2db6aSHong Zhang mumps->id.irhs_sparse = NULL; 2253e3f2db6aSHong Zhang mumps->id.nz_rhs = 0; 2254e3f2db6aSHong Zhang mumps->id.rhs_sparse = NULL; 2255e3f2db6aSHong Zhang } 2256bb599dfdSHong Zhang mumps->id.ICNTL(20) = 1; /* rhs is sparse */ 2257e3f2db6aSHong Zhang mumps->id.ICNTL(21) = 0; /* solution is in assembled centralized format */ 2258bb599dfdSHong Zhang 2259bb599dfdSHong Zhang /* solve phase */ 2260bb599dfdSHong Zhang /*-------------*/ 2261bb599dfdSHong Zhang mumps->id.job = JOB_SOLVE; 22623ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 2263e3f2db6aSHong Zhang if (mumps->id.INFOG(1) < 0) 2264e3f2db6aSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 226514267174SHong Zhang 2266e3f2db6aSHong Zhang if (!mumps->myid) { 22670e6b8875SHong Zhang ierr = MatSeqAIJRestoreArray(Btseq,&aa);CHKERRQ(ierr); 22680e6b8875SHong Zhang ierr = MatRestoreRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 22690e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2270e3f2db6aSHong Zhang } 2271bb599dfdSHong Zhang PetscFunctionReturn(0); 2272bb599dfdSHong Zhang } 2273bb599dfdSHong Zhang 2274bb599dfdSHong Zhang /*@ 227589a9c03aSHong Zhang MatMumpsGetInverse - Get user-specified set of entries in inverse of A 2276bb599dfdSHong Zhang 2277bb599dfdSHong Zhang Logically Collective on Mat 2278bb599dfdSHong Zhang 2279bb599dfdSHong Zhang Input Parameters: 2280bb599dfdSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2281e3f2db6aSHong Zhang - spRHS - sequential sparse matrix in MATTRANSPOSEMAT format holding specified indices in processor[0] 2282bb599dfdSHong Zhang 2283bb599dfdSHong Zhang Output Parameter: 2284e3f2db6aSHong Zhang . spRHS - requested entries of inverse of A 2285bb599dfdSHong Zhang 2286bb599dfdSHong Zhang Level: beginner 2287bb599dfdSHong Zhang 2288bb599dfdSHong Zhang References: 2289bb599dfdSHong Zhang . MUMPS Users' Guide 2290bb599dfdSHong Zhang 2291bb599dfdSHong Zhang .seealso: MatGetFactor(), MatCreateTranspose() 2292bb599dfdSHong Zhang @*/ 229389a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse(Mat F,Mat spRHS) 2294bb599dfdSHong Zhang { 2295bb599dfdSHong Zhang PetscErrorCode ierr; 2296bb599dfdSHong Zhang 2297bb599dfdSHong Zhang PetscFunctionBegin; 2298bb599dfdSHong Zhang PetscValidType(F,1); 2299bb599dfdSHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 230089a9c03aSHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverse_C",(Mat,Mat),(F,spRHS));CHKERRQ(ierr); 2301bb599dfdSHong Zhang PetscFunctionReturn(0); 2302bb599dfdSHong Zhang } 2303bb599dfdSHong Zhang 23040e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose_MUMPS(Mat F,Mat spRHST) 23050e6b8875SHong Zhang { 23060e6b8875SHong Zhang PetscErrorCode ierr; 23070e6b8875SHong Zhang Mat spRHS; 23080e6b8875SHong Zhang 23090e6b8875SHong Zhang PetscFunctionBegin; 23100e6b8875SHong Zhang ierr = MatCreateTranspose(spRHST,&spRHS);CHKERRQ(ierr); 23110e6b8875SHong Zhang ierr = MatMumpsGetInverse_MUMPS(F,spRHS);CHKERRQ(ierr); 23120e6b8875SHong Zhang ierr = MatDestroy(&spRHS);CHKERRQ(ierr); 23130e6b8875SHong Zhang PetscFunctionReturn(0); 23140e6b8875SHong Zhang } 23150e6b8875SHong Zhang 23160e6b8875SHong Zhang /*@ 2317eef1237cSHong Zhang MatMumpsGetInverseTranspose - Get user-specified set of entries in inverse of matrix A^T 23180e6b8875SHong Zhang 23190e6b8875SHong Zhang Logically Collective on Mat 23200e6b8875SHong Zhang 23210e6b8875SHong Zhang Input Parameters: 23220e6b8875SHong Zhang + F - the factored matrix of A obtained by calling MatGetFactor() from PETSc-MUMPS interface 23230e6b8875SHong Zhang - spRHST - sequential sparse matrix in MATAIJ format holding specified indices of A^T in processor[0] 23240e6b8875SHong Zhang 23250e6b8875SHong Zhang Output Parameter: 23260e6b8875SHong Zhang . spRHST - requested entries of inverse of A^T 23270e6b8875SHong Zhang 23280e6b8875SHong Zhang Level: beginner 23290e6b8875SHong Zhang 23300e6b8875SHong Zhang References: 23310e6b8875SHong Zhang . MUMPS Users' Guide 23320e6b8875SHong Zhang 23330e6b8875SHong Zhang .seealso: MatGetFactor(), MatCreateTranspose(), MatMumpsGetInverse() 23340e6b8875SHong Zhang @*/ 23350e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose(Mat F,Mat spRHST) 23360e6b8875SHong Zhang { 23370e6b8875SHong Zhang PetscErrorCode ierr; 23380e6b8875SHong Zhang PetscBool flg; 23390e6b8875SHong Zhang 23400e6b8875SHong Zhang PetscFunctionBegin; 23410e6b8875SHong Zhang PetscValidType(F,1); 23420e6b8875SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 23430e6b8875SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)spRHST,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 23440e6b8875SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)spRHST),PETSC_ERR_ARG_WRONG,"Matrix spRHST must be MATAIJ matrix"); 23450e6b8875SHong Zhang 23460e6b8875SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverseTranspose_C",(Mat,Mat),(F,spRHST));CHKERRQ(ierr); 23470e6b8875SHong Zhang PetscFunctionReturn(0); 23480e6b8875SHong Zhang } 23490e6b8875SHong Zhang 2350a21f80fcSHong Zhang /*@ 2351a21f80fcSHong Zhang MatMumpsGetInfo - Get MUMPS parameter INFO() 2352a21f80fcSHong Zhang 2353a21f80fcSHong Zhang Logically Collective on Mat 2354a21f80fcSHong Zhang 2355a21f80fcSHong Zhang Input Parameters: 2356a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2357a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFO() 2358a21f80fcSHong Zhang 2359a21f80fcSHong Zhang Output Parameter: 2360a21f80fcSHong Zhang . ival - value of MUMPS INFO(icntl) 2361a21f80fcSHong Zhang 2362a21f80fcSHong Zhang Level: beginner 2363a21f80fcSHong Zhang 236496a0c994SBarry Smith References: 236596a0c994SBarry Smith . MUMPS Users' Guide 2366a21f80fcSHong Zhang 23679fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2368a21f80fcSHong Zhang @*/ 2369ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo(Mat F,PetscInt icntl,PetscInt *ival) 2370bc6112feSHong Zhang { 2371bc6112feSHong Zhang PetscErrorCode ierr; 2372bc6112feSHong Zhang 2373bc6112feSHong Zhang PetscFunctionBegin; 23742989dfd4SHong Zhang PetscValidType(F,1); 23752989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2376ca810319SHong Zhang PetscValidIntPointer(ival,3); 23772989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfo_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2378bc6112feSHong Zhang PetscFunctionReturn(0); 2379bc6112feSHong Zhang } 2380bc6112feSHong Zhang 2381a21f80fcSHong Zhang /*@ 2382a21f80fcSHong Zhang MatMumpsGetInfog - Get MUMPS parameter INFOG() 2383a21f80fcSHong Zhang 2384a21f80fcSHong Zhang Logically Collective on Mat 2385a21f80fcSHong Zhang 2386a21f80fcSHong Zhang Input Parameters: 2387a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2388a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFOG() 2389a21f80fcSHong Zhang 2390a21f80fcSHong Zhang Output Parameter: 2391a21f80fcSHong Zhang . ival - value of MUMPS INFOG(icntl) 2392a21f80fcSHong Zhang 2393a21f80fcSHong Zhang Level: beginner 2394a21f80fcSHong Zhang 239596a0c994SBarry Smith References: 239696a0c994SBarry Smith . MUMPS Users' Guide 2397a21f80fcSHong Zhang 23989fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2399a21f80fcSHong Zhang @*/ 2400ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog(Mat F,PetscInt icntl,PetscInt *ival) 2401bc6112feSHong Zhang { 2402bc6112feSHong Zhang PetscErrorCode ierr; 2403bc6112feSHong Zhang 2404bc6112feSHong Zhang PetscFunctionBegin; 24052989dfd4SHong Zhang PetscValidType(F,1); 24062989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2407ca810319SHong Zhang PetscValidIntPointer(ival,3); 24082989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfog_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2409bc6112feSHong Zhang PetscFunctionReturn(0); 2410bc6112feSHong Zhang } 2411bc6112feSHong Zhang 2412a21f80fcSHong Zhang /*@ 2413a21f80fcSHong Zhang MatMumpsGetRinfo - Get MUMPS parameter RINFO() 2414a21f80fcSHong Zhang 2415a21f80fcSHong Zhang Logically Collective on Mat 2416a21f80fcSHong Zhang 2417a21f80fcSHong Zhang Input Parameters: 2418a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2419a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFO() 2420a21f80fcSHong Zhang 2421a21f80fcSHong Zhang Output Parameter: 2422a21f80fcSHong Zhang . val - value of MUMPS RINFO(icntl) 2423a21f80fcSHong Zhang 2424a21f80fcSHong Zhang Level: beginner 2425a21f80fcSHong Zhang 242696a0c994SBarry Smith References: 242796a0c994SBarry Smith . MUMPS Users' Guide 2428a21f80fcSHong Zhang 24299fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2430a21f80fcSHong Zhang @*/ 2431ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo(Mat F,PetscInt icntl,PetscReal *val) 2432bc6112feSHong Zhang { 2433bc6112feSHong Zhang PetscErrorCode ierr; 2434bc6112feSHong Zhang 2435bc6112feSHong Zhang PetscFunctionBegin; 24362989dfd4SHong Zhang PetscValidType(F,1); 24372989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2438bc6112feSHong Zhang PetscValidRealPointer(val,3); 24392989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfo_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2440bc6112feSHong Zhang PetscFunctionReturn(0); 2441bc6112feSHong Zhang } 2442bc6112feSHong Zhang 2443a21f80fcSHong Zhang /*@ 2444a21f80fcSHong Zhang MatMumpsGetRinfog - Get MUMPS parameter RINFOG() 2445a21f80fcSHong Zhang 2446a21f80fcSHong Zhang Logically Collective on Mat 2447a21f80fcSHong Zhang 2448a21f80fcSHong Zhang Input Parameters: 2449a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2450a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFOG() 2451a21f80fcSHong Zhang 2452a21f80fcSHong Zhang Output Parameter: 2453a21f80fcSHong Zhang . val - value of MUMPS RINFOG(icntl) 2454a21f80fcSHong Zhang 2455a21f80fcSHong Zhang Level: beginner 2456a21f80fcSHong Zhang 245796a0c994SBarry Smith References: 245896a0c994SBarry Smith . MUMPS Users' Guide 2459a21f80fcSHong Zhang 24609fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2461a21f80fcSHong Zhang @*/ 2462ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog(Mat F,PetscInt icntl,PetscReal *val) 2463bc6112feSHong Zhang { 2464bc6112feSHong Zhang PetscErrorCode ierr; 2465bc6112feSHong Zhang 2466bc6112feSHong Zhang PetscFunctionBegin; 24672989dfd4SHong Zhang PetscValidType(F,1); 24682989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2469bc6112feSHong Zhang PetscValidRealPointer(val,3); 24702989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfog_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2471bc6112feSHong Zhang PetscFunctionReturn(0); 2472bc6112feSHong Zhang } 2473bc6112feSHong Zhang 247424b6179bSKris Buschelman /*MC 24752692d6eeSBarry Smith MATSOLVERMUMPS - A matrix type providing direct solvers (LU and Cholesky) for 247624b6179bSKris Buschelman distributed and sequential matrices via the external package MUMPS. 247724b6179bSKris Buschelman 247841c8de11SBarry Smith Works with MATAIJ and MATSBAIJ matrices 247924b6179bSKris Buschelman 2480c2b89b5dSBarry Smith Use ./configure --download-mumps --download-scalapack --download-parmetis --download-metis --download-ptscotch to have PETSc installed with MUMPS 2481c2b89b5dSBarry Smith 2482217d3b1eSJunchao Zhang Use ./configure --with-openmp --download-hwloc (or --with-hwloc) to enable running MUMPS in MPI+OpenMP hybrid mode and non-MUMPS in flat-MPI mode. See details below. 2483217d3b1eSJunchao Zhang 24843ca39a21SBarry Smith Use -pc_type cholesky or lu -pc_factor_mat_solver_type mumps to use this direct solver 2485c2b89b5dSBarry Smith 248624b6179bSKris Buschelman Options Database Keys: 24874422a9fcSPatrick Sanan + -mat_mumps_icntl_1 - ICNTL(1): output stream for error messages 24884422a9fcSPatrick Sanan . -mat_mumps_icntl_2 - ICNTL(2): output stream for diagnostic printing, statistics, and warning 24894422a9fcSPatrick Sanan . -mat_mumps_icntl_3 - ICNTL(3): output stream for global information, collected on the host 24904422a9fcSPatrick Sanan . -mat_mumps_icntl_4 - ICNTL(4): level of printing (0 to 4) 24914422a9fcSPatrick Sanan . -mat_mumps_icntl_6 - ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7) 24924422a9fcSPatrick Sanan . -mat_mumps_icntl_7 - ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis 24934422a9fcSPatrick Sanan . -mat_mumps_icntl_8 - ICNTL(8): scaling strategy (-2 to 8 or 77) 24944422a9fcSPatrick Sanan . -mat_mumps_icntl_10 - ICNTL(10): max num of refinements 24954422a9fcSPatrick Sanan . -mat_mumps_icntl_11 - ICNTL(11): statistics related to an error analysis (via -ksp_view) 24964422a9fcSPatrick Sanan . -mat_mumps_icntl_12 - ICNTL(12): an ordering strategy for symmetric matrices (0 to 3) 24974422a9fcSPatrick Sanan . -mat_mumps_icntl_13 - ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting 24984422a9fcSPatrick Sanan . -mat_mumps_icntl_14 - ICNTL(14): percentage increase in the estimated working space 24994422a9fcSPatrick Sanan . -mat_mumps_icntl_19 - ICNTL(19): computes the Schur complement 25004422a9fcSPatrick Sanan . -mat_mumps_icntl_22 - ICNTL(22): in-core/out-of-core factorization and solve (0 or 1) 25014422a9fcSPatrick Sanan . -mat_mumps_icntl_23 - ICNTL(23): max size of the working memory (MB) that can allocate per processor 25024422a9fcSPatrick Sanan . -mat_mumps_icntl_24 - ICNTL(24): detection of null pivot rows (0 or 1) 25034422a9fcSPatrick Sanan . -mat_mumps_icntl_25 - ICNTL(25): compute a solution of a deficient matrix and a null space basis 25044422a9fcSPatrick Sanan . -mat_mumps_icntl_26 - ICNTL(26): drives the solution phase if a Schur complement matrix 25054422a9fcSPatrick Sanan . -mat_mumps_icntl_28 - ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering 25064422a9fcSPatrick Sanan . -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis 25074422a9fcSPatrick Sanan . -mat_mumps_icntl_30 - ICNTL(30): compute user-specified set of entries in inv(A) 25084422a9fcSPatrick Sanan . -mat_mumps_icntl_31 - ICNTL(31): indicates which factors may be discarded during factorization 25094422a9fcSPatrick Sanan . -mat_mumps_icntl_33 - ICNTL(33): compute determinant 2510a0e18203SThibaut Appel . -mat_mumps_icntl_35 - ICNTL(35): level of activation of BLR (Block Low-Rank) feature 2511a0e18203SThibaut Appel . -mat_mumps_icntl_36 - ICNTL(36): controls the choice of BLR factorization variant 2512a0e18203SThibaut Appel . -mat_mumps_icntl_38 - ICNTL(38): sets the estimated compression rate of LU factors with BLR 25134422a9fcSPatrick Sanan . -mat_mumps_cntl_1 - CNTL(1): relative pivoting threshold 25144422a9fcSPatrick Sanan . -mat_mumps_cntl_2 - CNTL(2): stopping criterion of refinement 25154422a9fcSPatrick Sanan . -mat_mumps_cntl_3 - CNTL(3): absolute pivoting threshold 25164422a9fcSPatrick Sanan . -mat_mumps_cntl_4 - CNTL(4): value for static pivoting 2517217d3b1eSJunchao Zhang . -mat_mumps_cntl_5 - CNTL(5): fixation for null pivots 2518a0e18203SThibaut Appel . -mat_mumps_cntl_7 - CNTL(7): precision of the dropping parameter used during BLR factorization 2519217d3b1eSJunchao Zhang - -mat_mumps_use_omp_threads [m] - run MUMPS in MPI+OpenMP hybrid mode as if omp_set_num_threads(m) is called before calling MUMPS. 2520217d3b1eSJunchao Zhang Default might be the number of cores per CPU package (socket) as reported by hwloc and suggested by the MUMPS manual. 252124b6179bSKris Buschelman 252224b6179bSKris Buschelman Level: beginner 252324b6179bSKris Buschelman 252495452b02SPatrick Sanan Notes: 252538548759SBarry Smith MUMPS Cholesky does not handle (complex) Hermitian matrices http://mumps.enseeiht.fr/doc/userguide_5.2.1.pdf so using it will error if the matrix is Hermitian. 252638548759SBarry Smith 2527c0decd05SBarry Smith When a MUMPS factorization fails inside a KSP solve, for example with a KSP_DIVERGED_PC_FAILED, one can find the MUMPS information about the failure by calling 25289fc87aa7SBarry Smith $ KSPGetPC(ksp,&pc); 25299fc87aa7SBarry Smith $ PCFactorGetMatrix(pc,&mat); 25309fc87aa7SBarry Smith $ MatMumpsGetInfo(mat,....); 25319fc87aa7SBarry Smith $ MatMumpsGetInfog(mat,....); etc. 25329fc87aa7SBarry Smith Or you can run with -ksp_error_if_not_converged and the program will be stopped and the information printed in the error message. 25339fc87aa7SBarry Smith 25348fcaa860SBarry Smith Two modes to run MUMPS/PETSc with OpenMP 25358fcaa860SBarry Smith 25368fcaa860SBarry Smith $ Set OMP_NUM_THREADS and run with fewer MPI ranks than cores. For example, if you want to have 16 OpenMP 25378fcaa860SBarry Smith $ threads per rank, then you may use "export OMP_NUM_THREADS=16 && mpirun -n 4 ./test". 25388fcaa860SBarry Smith 25398fcaa860SBarry Smith $ -mat_mumps_use_omp_threads [m] and run your code with as many MPI ranks as the number of cores. For example, 25408fcaa860SBarry Smith $ if a compute node has 32 cores and you run on two nodes, you may use "mpirun -n 64 ./test -mat_mumps_use_omp_threads 16" 25418fcaa860SBarry Smith 25428fcaa860SBarry Smith To run MUMPS in MPI+OpenMP hybrid mode (i.e., enable multithreading in MUMPS), but still run the non-MUMPS part 2543217d3b1eSJunchao Zhang (i.e., PETSc part) of your code in the so-called flat-MPI (aka pure-MPI) mode, you need to configure PETSc with --with-openmp --download-hwloc 2544217d3b1eSJunchao Zhang (or --with-hwloc), and have an MPI that supports MPI-3.0's process shared memory (which is usually available). Since MUMPS calls BLAS 25458fcaa860SBarry Smith libraries, to really get performance, you should have multithreaded BLAS libraries such as Intel MKL, AMD ACML, Cray libSci or OpenBLAS 25468fcaa860SBarry Smith (PETSc will automatically try to utilized a threaded BLAS if --with-openmp is provided). 2547217d3b1eSJunchao Zhang 25488fcaa860SBarry Smith If you run your code through a job submission system, there are caveats in MPI rank mapping. We use MPI_Comm_split_type() to obtain MPI 2549217d3b1eSJunchao Zhang processes on each compute node. Listing the processes in rank ascending order, we split processes on a node into consecutive groups of 2550217d3b1eSJunchao Zhang size m and create a communicator called omp_comm for each group. Rank 0 in an omp_comm is called the master rank, and others in the omp_comm 2551217d3b1eSJunchao Zhang are called slave ranks (or slaves). Only master ranks are seen to MUMPS and slaves are not. We will free CPUs assigned to slaves (might be set 2552217d3b1eSJunchao Zhang by CPU binding policies in job scripts) and make the CPUs available to the master so that OMP threads spawned by MUMPS can run on the CPUs. 2553217d3b1eSJunchao Zhang In a multi-socket compute node, MPI rank mapping is an issue. Still use the above example and suppose your compute node has two sockets, 2554217d3b1eSJunchao Zhang if you interleave MPI ranks on the two sockets, in other words, even ranks are placed on socket 0, and odd ranks are on socket 1, and bind 2555217d3b1eSJunchao Zhang MPI ranks to cores, then with -mat_mumps_use_omp_threads 16, a master rank (and threads it spawns) will use half cores in socket 0, and half 2556217d3b1eSJunchao Zhang cores in socket 1, that definitely hurts locality. On the other hand, if you map MPI ranks consecutively on the two sockets, then the 2557217d3b1eSJunchao Zhang problem will not happen. Therefore, when you use -mat_mumps_use_omp_threads, you need to keep an eye on your MPI rank mapping and CPU binding. 25588fcaa860SBarry Smith For example, with the Slurm job scheduler, one can use srun --cpu-bind=verbose -m block:block to map consecutive MPI ranks to sockets and 2559217d3b1eSJunchao Zhang examine the mapping result. 2560217d3b1eSJunchao Zhang 2561217d3b1eSJunchao Zhang PETSc does not control thread binding in MUMPS. So to get best performance, one still has to set OMP_PROC_BIND and OMP_PLACES in job scripts, 2562217d3b1eSJunchao Zhang for example, export OMP_PLACES=threads and export OMP_PROC_BIND=spread. One does not need to export OMP_NUM_THREADS=m in job scripts as PETSc 2563217d3b1eSJunchao Zhang calls omp_set_num_threads(m) internally before calling MUMPS. 2564217d3b1eSJunchao Zhang 2565217d3b1eSJunchao Zhang References: 2566217d3b1eSJunchao Zhang + 1. - Heroux, Michael A., R. Brightwell, and Michael M. Wolf. "Bi-modal MPI and MPI+ threads computing on scalable multicore systems." IJHPCA (Submitted) (2011). 2567217d3b1eSJunchao Zhang - 2. - Gutierrez, Samuel K., et al. "Accommodating Thread-Level Heterogeneity in Coupled Parallel Applications." Parallel and Distributed Processing Symposium (IPDPS), 2017 IEEE International. IEEE, 2017. 2568217d3b1eSJunchao Zhang 25693ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog(), KSPGetPC(), PCGetFactor(), PCFactorGetMatrix() 257041c8de11SBarry Smith 257124b6179bSKris Buschelman M*/ 257224b6179bSKris Buschelman 2573ea799195SBarry Smith static PetscErrorCode MatFactorGetSolverType_mumps(Mat A,MatSolverType *type) 257435bd34faSBarry Smith { 257535bd34faSBarry Smith PetscFunctionBegin; 25762692d6eeSBarry Smith *type = MATSOLVERMUMPS; 257735bd34faSBarry Smith PetscFunctionReturn(0); 257835bd34faSBarry Smith } 257935bd34faSBarry Smith 2580bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI AIJ matrices */ 2581cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_aij_mumps(Mat A,MatFactorType ftype,Mat *F) 25822877fffaSHong Zhang { 25832877fffaSHong Zhang Mat B; 25842877fffaSHong Zhang PetscErrorCode ierr; 25852877fffaSHong Zhang Mat_MUMPS *mumps; 2586ace3abfcSBarry Smith PetscBool isSeqAIJ; 25872877fffaSHong Zhang 25882877fffaSHong Zhang PetscFunctionBegin; 25892877fffaSHong Zhang /* Create the factorization matrix */ 2590251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ);CHKERRQ(ierr); 2591ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 25922877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2593e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2594e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 25952877fffaSHong Zhang 2596b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 25972205254eSKarl Rupp 25982877fffaSHong Zhang B->ops->view = MatView_MUMPS; 259935bd34faSBarry Smith B->ops->getinfo = MatGetInfo_MUMPS; 26002205254eSKarl Rupp 26013ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 26025a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 26035a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2604bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2605bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2606bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2607bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2608ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2609ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2610ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2611ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 261289a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 26130e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 26146444a565SStefano Zampini 2615450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2616450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 2617d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 2618bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqaij; 2619bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpiaij; 2620746480a1SHong Zhang mumps->sym = 0; 2621dcd589f8SShri Abhyankar } else { 262267877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2623450b117fSShri Abhyankar B->factortype = MAT_FACTOR_CHOLESKY; 2624bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqsbaij; 2625bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpisbaij; 262659ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 262759ac8732SStefano Zampini mumps->sym = 2; 262859ac8732SStefano Zampini #else 26296fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 26306fdc2a6dSBarry Smith else mumps->sym = 2; 263159ac8732SStefano Zampini #endif 2632450b117fSShri Abhyankar } 26332877fffaSHong Zhang 263400c67f3bSHong Zhang /* set solvertype */ 263500c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 263600c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 263700c67f3bSHong Zhang 26382877fffaSHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2639e69c285eSBarry Smith B->data = (void*)mumps; 26402205254eSKarl Rupp 2641f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2642746480a1SHong Zhang 26432877fffaSHong Zhang *F = B; 26442877fffaSHong Zhang PetscFunctionReturn(0); 26452877fffaSHong Zhang } 26462877fffaSHong Zhang 2647bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI SBAIJ matrices */ 2648cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_sbaij_mumps(Mat A,MatFactorType ftype,Mat *F) 26492877fffaSHong Zhang { 26502877fffaSHong Zhang Mat B; 26512877fffaSHong Zhang PetscErrorCode ierr; 26522877fffaSHong Zhang Mat_MUMPS *mumps; 2653ace3abfcSBarry Smith PetscBool isSeqSBAIJ; 26542877fffaSHong Zhang 26552877fffaSHong Zhang PetscFunctionBegin; 2656ce94432eSBarry Smith if (ftype != MAT_FACTOR_CHOLESKY) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with MUMPS LU, use AIJ matrix"); 2657251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ);CHKERRQ(ierr); 26582877fffaSHong Zhang /* Create the factorization matrix */ 2659ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 26602877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2661e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2662e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2663e69c285eSBarry Smith 2664b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2665bccb9932SShri Abhyankar if (isSeqSBAIJ) { 266616ebf90aSShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_seqsbaij_seqsbaij; 2667dcd589f8SShri Abhyankar } else { 2668bccb9932SShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_mpisbaij_mpisbaij; 2669bccb9932SShri Abhyankar } 2670bccb9932SShri Abhyankar 2671e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 267267877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2673bccb9932SShri Abhyankar B->ops->view = MatView_MUMPS; 26742205254eSKarl Rupp 26753ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 26765a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 26775a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2678b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2679b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2680b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2681b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2682ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2683ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2684ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2685ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 268689a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2687eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 26882205254eSKarl Rupp 2689f4762488SHong Zhang B->factortype = MAT_FACTOR_CHOLESKY; 269059ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 269159ac8732SStefano Zampini mumps->sym = 2; 269259ac8732SStefano Zampini #else 26936fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 26946fdc2a6dSBarry Smith else mumps->sym = 2; 269559ac8732SStefano Zampini #endif 2696a214ac2aSShri Abhyankar 269700c67f3bSHong Zhang /* set solvertype */ 269800c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 269900c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 270000c67f3bSHong Zhang 2701f3c0ef26SHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2702e69c285eSBarry Smith B->data = (void*)mumps; 27032205254eSKarl Rupp 2704f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2705746480a1SHong Zhang 27062877fffaSHong Zhang *F = B; 27072877fffaSHong Zhang PetscFunctionReturn(0); 27082877fffaSHong Zhang } 270997969023SHong Zhang 2710cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_baij_mumps(Mat A,MatFactorType ftype,Mat *F) 271167877ebaSShri Abhyankar { 271267877ebaSShri Abhyankar Mat B; 271367877ebaSShri Abhyankar PetscErrorCode ierr; 271467877ebaSShri Abhyankar Mat_MUMPS *mumps; 2715ace3abfcSBarry Smith PetscBool isSeqBAIJ; 271667877ebaSShri Abhyankar 271767877ebaSShri Abhyankar PetscFunctionBegin; 271867877ebaSShri Abhyankar /* Create the factorization matrix */ 2719251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&isSeqBAIJ);CHKERRQ(ierr); 2720ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 272167877ebaSShri Abhyankar ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2722e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2723e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2724450b117fSShri Abhyankar 2725b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2726450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2727450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_BAIJMUMPS; 2728450b117fSShri Abhyankar B->factortype = MAT_FACTOR_LU; 2729bccb9932SShri Abhyankar if (isSeqBAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqbaij_seqaij; 2730bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpibaij_mpiaij; 2731746480a1SHong Zhang mumps->sym = 0; 2732f23aa3ddSBarry Smith } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc BAIJ matrices with MUMPS Cholesky, use SBAIJ or AIJ matrix instead\n"); 2733bccb9932SShri Abhyankar 2734e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 2735450b117fSShri Abhyankar B->ops->view = MatView_MUMPS; 27362205254eSKarl Rupp 27373ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 27385a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 27395a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2740bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2741bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2742bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2743bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2744ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2745ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2746ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2747ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 274889a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2749eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 2750450b117fSShri Abhyankar 275100c67f3bSHong Zhang /* set solvertype */ 275200c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 275300c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 275400c67f3bSHong Zhang 27557ee00b23SStefano Zampini B->ops->destroy = MatDestroy_MUMPS; 27567ee00b23SStefano Zampini B->data = (void*)mumps; 27577ee00b23SStefano Zampini 27587ee00b23SStefano Zampini ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 27597ee00b23SStefano Zampini 27607ee00b23SStefano Zampini *F = B; 27617ee00b23SStefano Zampini PetscFunctionReturn(0); 27627ee00b23SStefano Zampini } 27637ee00b23SStefano Zampini 27647ee00b23SStefano Zampini /* MatGetFactor for Seq and MPI SELL matrices */ 27657ee00b23SStefano Zampini static PetscErrorCode MatGetFactor_sell_mumps(Mat A,MatFactorType ftype,Mat *F) 27667ee00b23SStefano Zampini { 27677ee00b23SStefano Zampini Mat B; 27687ee00b23SStefano Zampini PetscErrorCode ierr; 27697ee00b23SStefano Zampini Mat_MUMPS *mumps; 27707ee00b23SStefano Zampini PetscBool isSeqSELL; 27717ee00b23SStefano Zampini 27727ee00b23SStefano Zampini PetscFunctionBegin; 27737ee00b23SStefano Zampini /* Create the factorization matrix */ 27747ee00b23SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSELL,&isSeqSELL);CHKERRQ(ierr); 27757ee00b23SStefano Zampini ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 27767ee00b23SStefano Zampini ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 27777ee00b23SStefano Zampini ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 27787ee00b23SStefano Zampini ierr = MatSetUp(B);CHKERRQ(ierr); 27797ee00b23SStefano Zampini 27807ee00b23SStefano Zampini ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 27817ee00b23SStefano Zampini 27827ee00b23SStefano Zampini B->ops->view = MatView_MUMPS; 27837ee00b23SStefano Zampini B->ops->getinfo = MatGetInfo_MUMPS; 27847ee00b23SStefano Zampini 27857ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 27867ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 27877ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 27887ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 27897ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 27907ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 27917ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 27927ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 27937ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 27947ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 27957ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 27967ee00b23SStefano Zampini 27977ee00b23SStefano Zampini if (ftype == MAT_FACTOR_LU) { 27987ee00b23SStefano Zampini B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 27997ee00b23SStefano Zampini B->factortype = MAT_FACTOR_LU; 28007ee00b23SStefano Zampini if (isSeqSELL) mumps->ConvertToTriples = MatConvertToTriples_seqsell_seqaij; 28017ee00b23SStefano Zampini else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 28027ee00b23SStefano Zampini mumps->sym = 0; 28037ee00b23SStefano Zampini } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 28047ee00b23SStefano Zampini 28057ee00b23SStefano Zampini /* set solvertype */ 28067ee00b23SStefano Zampini ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 28077ee00b23SStefano Zampini ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 28087ee00b23SStefano Zampini 2809450b117fSShri Abhyankar B->ops->destroy = MatDestroy_MUMPS; 2810e69c285eSBarry Smith B->data = (void*)mumps; 28112205254eSKarl Rupp 2812f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2813746480a1SHong Zhang 2814450b117fSShri Abhyankar *F = B; 2815450b117fSShri Abhyankar PetscFunctionReturn(0); 2816450b117fSShri Abhyankar } 281742c9c57cSBarry Smith 28183ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_MUMPS(void) 281942c9c57cSBarry Smith { 282042c9c57cSBarry Smith PetscErrorCode ierr; 282142c9c57cSBarry Smith 282242c9c57cSBarry Smith PetscFunctionBegin; 28233ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28243ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28253ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28263ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28273ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPISBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 28283ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28293ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28303ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28313ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28323ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 28337ee00b23SStefano Zampini ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSELL,MAT_FACTOR_LU,MatGetFactor_sell_mumps);CHKERRQ(ierr); 283442c9c57cSBarry Smith PetscFunctionReturn(0); 283542c9c57cSBarry Smith } 283642c9c57cSBarry Smith 2837