11c2a3de1SBarry Smith 2397b6df1SKris Buschelman /* 3c2b5dc30SHong Zhang Provides an interface to the MUMPS sparse solver 4397b6df1SKris Buschelman */ 551d5961aSHong Zhang 6c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> /*I "petscmat.h" I*/ 7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h> 87ee00b23SStefano Zampini #include <../src/mat/impls/sell/mpi/mpisell.h> 9397b6df1SKris Buschelman 10397b6df1SKris Buschelman EXTERN_C_BEGIN 11397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 122907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 132907cef9SHong Zhang #include <cmumps_c.h> 142907cef9SHong Zhang #else 15c6db04a5SJed Brown #include <zmumps_c.h> 162907cef9SHong Zhang #endif 172907cef9SHong Zhang #else 182907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 192907cef9SHong Zhang #include <smumps_c.h> 20397b6df1SKris Buschelman #else 21c6db04a5SJed Brown #include <dmumps_c.h> 22397b6df1SKris Buschelman #endif 232907cef9SHong Zhang #endif 24397b6df1SKris Buschelman EXTERN_C_END 25397b6df1SKris Buschelman #define JOB_INIT -1 263d472b54SHong Zhang #define JOB_FACTSYMBOLIC 1 273d472b54SHong Zhang #define JOB_FACTNUMERIC 2 283d472b54SHong Zhang #define JOB_SOLVE 3 29397b6df1SKris Buschelman #define JOB_END -2 303d472b54SHong Zhang 312907cef9SHong Zhang /* calls to MUMPS */ 322907cef9SHong Zhang #if defined(PETSC_USE_COMPLEX) 332907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 343ab56b82SJunchao Zhang #define MUMPS_c cmumps_c 352907cef9SHong Zhang #else 363ab56b82SJunchao Zhang #define MUMPS_c zmumps_c 372907cef9SHong Zhang #endif 382907cef9SHong Zhang #else 392907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 403ab56b82SJunchao Zhang #define MUMPS_c smumps_c 412907cef9SHong Zhang #else 423ab56b82SJunchao Zhang #define MUMPS_c dmumps_c 432907cef9SHong Zhang #endif 442907cef9SHong Zhang #endif 452907cef9SHong Zhang 46217d3b1eSJunchao Zhang /* if using PETSc OpenMP support, we only call MUMPS on master ranks. Before/after the call, we change/restore CPUs the master ranks can run on */ 473ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 483ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 493ab56b82SJunchao Zhang do { \ 503ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { \ 513ab56b82SJunchao Zhang if (mumps->is_omp_master) { \ 523ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterBegin(mumps->omp_ctrl);CHKERRQ(ierr); \ 533ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 543ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterEnd(mumps->omp_ctrl);CHKERRQ(ierr); \ 553ab56b82SJunchao Zhang } \ 563ab56b82SJunchao Zhang ierr = PetscOmpCtrlBarrier(mumps->omp_ctrl);CHKERRQ(ierr); \ 57c3714a1dSJunchao Zhang /* Global info is same on all processes so we Bcast it within omp_comm. Local info is specific \ 58c3714a1dSJunchao Zhang to processes, so we only Bcast info[1], an error code and leave others (since they do not have \ 59c3714a1dSJunchao Zhang an easy translation between omp_comm and petsc_comm). See MUMPS-5.1.2 manual p82. \ 60c3714a1dSJunchao Zhang omp_comm is a small shared memory communicator, hence doing multiple Bcast as shown below is OK. \ 61c3714a1dSJunchao Zhang */ \ 62c3714a1dSJunchao Zhang ierr = MPI_Bcast(mumps->id.infog, 40,MPI_INT, 0,mumps->omp_comm);CHKERRQ(ierr); \ 63c3714a1dSJunchao Zhang ierr = MPI_Bcast(mumps->id.rinfog,20,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); \ 64c3714a1dSJunchao Zhang ierr = MPI_Bcast(mumps->id.info, 1, MPI_INT, 0,mumps->omp_comm);CHKERRQ(ierr); \ 653ab56b82SJunchao Zhang } else { \ 663ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 673ab56b82SJunchao Zhang } \ 683ab56b82SJunchao Zhang } while(0) 693ab56b82SJunchao Zhang #else 703ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 713ab56b82SJunchao Zhang do { MUMPS_c(&mumps->id); } while (0) 723ab56b82SJunchao Zhang #endif 733ab56b82SJunchao Zhang 74940cd9d6SSatish Balay /* declare MumpsScalar */ 75940cd9d6SSatish Balay #if defined(PETSC_USE_COMPLEX) 76940cd9d6SSatish Balay #if defined(PETSC_USE_REAL_SINGLE) 77940cd9d6SSatish Balay #define MumpsScalar mumps_complex 78940cd9d6SSatish Balay #else 79940cd9d6SSatish Balay #define MumpsScalar mumps_double_complex 80940cd9d6SSatish Balay #endif 81940cd9d6SSatish Balay #else 82940cd9d6SSatish Balay #define MumpsScalar PetscScalar 83940cd9d6SSatish Balay #endif 843d472b54SHong Zhang 85397b6df1SKris Buschelman /* macros s.t. indices match MUMPS documentation */ 86397b6df1SKris Buschelman #define ICNTL(I) icntl[(I)-1] 87397b6df1SKris Buschelman #define CNTL(I) cntl[(I)-1] 88397b6df1SKris Buschelman #define INFOG(I) infog[(I)-1] 89a7aca84bSHong Zhang #define INFO(I) info[(I)-1] 90397b6df1SKris Buschelman #define RINFOG(I) rinfog[(I)-1] 91adc1d99fSHong Zhang #define RINFO(I) rinfo[(I)-1] 92397b6df1SKris Buschelman 93397b6df1SKris Buschelman typedef struct { 94397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 952907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 962907cef9SHong Zhang CMUMPS_STRUC_C id; 972907cef9SHong Zhang #else 98397b6df1SKris Buschelman ZMUMPS_STRUC_C id; 992907cef9SHong Zhang #endif 1002907cef9SHong Zhang #else 1012907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 1022907cef9SHong Zhang SMUMPS_STRUC_C id; 103397b6df1SKris Buschelman #else 104397b6df1SKris Buschelman DMUMPS_STRUC_C id; 105397b6df1SKris Buschelman #endif 1062907cef9SHong Zhang #endif 1072907cef9SHong Zhang 108397b6df1SKris Buschelman MatStructure matstruc; 1092d4298aeSJunchao Zhang PetscMPIInt myid,petsc_size; 110a5e57a09SHong Zhang PetscInt *irn,*jcn,nz,sym; 111397b6df1SKris Buschelman PetscScalar *val; 1122d4298aeSJunchao Zhang MPI_Comm mumps_comm; 113a5e57a09SHong Zhang PetscInt ICNTL9_pre; /* check if ICNTL(9) is changed from previous MatSolve */ 114801fbe65SHong Zhang VecScatter scat_rhs, scat_sol; /* used by MatSolve() */ 115801fbe65SHong Zhang Vec b_seq,x_seq; 116b34f08ffSHong Zhang PetscInt ninfo,*info; /* display INFO */ 117b5fa320bSStefano Zampini PetscInt sizeredrhs; 11859ac8732SStefano Zampini PetscScalar *schur_sol; 11959ac8732SStefano Zampini PetscInt schur_sizesol; 1202205254eSKarl Rupp 1213ab56b82SJunchao Zhang PetscBool use_petsc_omp_support; 1223ab56b82SJunchao Zhang PetscOmpCtrl omp_ctrl; /* an OpenMP controler that blocked processes will release their CPU (MPI_Barrier does not have this guarantee) */ 1233ab56b82SJunchao Zhang MPI_Comm petsc_comm,omp_comm; /* petsc_comm is petsc matrix's comm */ 1243ab56b82SJunchao Zhang PetscMPIInt mpinz; /* on master rank, nz = sum(mpinz) over omp_comm; on other ranks, mpinz = nz*/ 1253ab56b82SJunchao Zhang PetscMPIInt omp_comm_size; 1263ab56b82SJunchao Zhang PetscBool is_omp_master; /* is this rank the master of omp_comm */ 1273ab56b82SJunchao Zhang PetscMPIInt *recvcount,*displs; 1283ab56b82SJunchao Zhang 129bccb9932SShri Abhyankar PetscErrorCode (*ConvertToTriples)(Mat, int, MatReuse, int*, int**, int**, PetscScalar**); 130f0c56d0fSKris Buschelman } Mat_MUMPS; 131f0c56d0fSKris Buschelman 13209573ac7SBarry Smith extern PetscErrorCode MatDuplicate_MUMPS(Mat,MatDuplicateOption,Mat*); 133b24902e0SBarry Smith 13459ac8732SStefano Zampini static PetscErrorCode MatMumpsResetSchur_Private(Mat_MUMPS* mumps) 135b5fa320bSStefano Zampini { 136b5fa320bSStefano Zampini PetscErrorCode ierr; 137b5fa320bSStefano Zampini 138b5fa320bSStefano Zampini PetscFunctionBegin; 139a3d589ffSStefano Zampini ierr = PetscFree(mumps->id.listvar_schur);CHKERRQ(ierr); 14059ac8732SStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 14159ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 14259ac8732SStefano Zampini mumps->id.size_schur = 0; 143b3cb21ddSStefano Zampini mumps->id.schur_lld = 0; 14459ac8732SStefano Zampini mumps->id.ICNTL(19) = 0; 14559ac8732SStefano Zampini PetscFunctionReturn(0); 14659ac8732SStefano Zampini } 14759ac8732SStefano Zampini 148b3cb21ddSStefano Zampini /* solve with rhs in mumps->id.redrhs and return in the same location */ 149b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsSolveSchur_Private(Mat F) 15059ac8732SStefano Zampini { 151b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 152b3cb21ddSStefano Zampini Mat S,B,X; 153b3cb21ddSStefano Zampini MatFactorSchurStatus schurstatus; 154b3cb21ddSStefano Zampini PetscInt sizesol; 15559ac8732SStefano Zampini PetscErrorCode ierr; 15659ac8732SStefano Zampini 15759ac8732SStefano Zampini PetscFunctionBegin; 158b3cb21ddSStefano Zampini ierr = MatFactorFactorizeSchurComplement(F);CHKERRQ(ierr); 159b3cb21ddSStefano Zampini ierr = MatFactorGetSchurComplement(F,&S,&schurstatus);CHKERRQ(ierr); 160b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&B);CHKERRQ(ierr); 161c4163675SStefano Zampini ierr = MatSetType(B,((PetscObject)S)->type_name);CHKERRQ(ierr); 162a3d589ffSStefano Zampini #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) 163*b470e4b4SRichard Tran Mills ierr = MatBindToCPU(B,S->boundtocpu);CHKERRQ(ierr); 164a3d589ffSStefano Zampini #endif 165b3cb21ddSStefano Zampini switch (schurstatus) { 166b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_FACTORED: 167b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&X);CHKERRQ(ierr); 168c4163675SStefano Zampini ierr = MatSetType(X,((PetscObject)S)->type_name);CHKERRQ(ierr); 169a3d589ffSStefano Zampini #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) 170*b470e4b4SRichard Tran Mills ierr = MatBindToCPU(X,S->boundtocpu);CHKERRQ(ierr); 171a3d589ffSStefano Zampini #endif 172b3cb21ddSStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 173b3cb21ddSStefano Zampini ierr = MatMatSolveTranspose(S,B,X);CHKERRQ(ierr); 17459ac8732SStefano Zampini } else { 175b3cb21ddSStefano Zampini ierr = MatMatSolve(S,B,X);CHKERRQ(ierr); 17659ac8732SStefano Zampini } 177b3cb21ddSStefano Zampini break; 178b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_INVERTED: 179b3cb21ddSStefano Zampini sizesol = mumps->id.nrhs*mumps->id.size_schur; 18059ac8732SStefano Zampini if (!mumps->schur_sol || sizesol > mumps->schur_sizesol) { 18159ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 18259ac8732SStefano Zampini ierr = PetscMalloc1(sizesol,&mumps->schur_sol);CHKERRQ(ierr); 18359ac8732SStefano Zampini mumps->schur_sizesol = sizesol; 184b5fa320bSStefano Zampini } 185b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,mumps->schur_sol,&X);CHKERRQ(ierr); 186c4163675SStefano Zampini ierr = MatSetType(X,((PetscObject)S)->type_name);CHKERRQ(ierr); 187a3d589ffSStefano Zampini #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) 188*b470e4b4SRichard Tran Mills ierr = MatBindToCPU(X,S->boundtocpu);CHKERRQ(ierr); 189a3d589ffSStefano Zampini #endif 19059ac8732SStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 191b3cb21ddSStefano Zampini ierr = MatTransposeMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 192b5fa320bSStefano Zampini } else { 193b3cb21ddSStefano Zampini ierr = MatMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 194b5fa320bSStefano Zampini } 195b3cb21ddSStefano Zampini ierr = MatCopy(X,B,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 196b3cb21ddSStefano Zampini break; 197b3cb21ddSStefano Zampini default: 198b3cb21ddSStefano Zampini SETERRQ1(PetscObjectComm((PetscObject)F),PETSC_ERR_SUP,"Unhandled MatFactorSchurStatus %D",F->schur_status); 199b3cb21ddSStefano Zampini break; 20059ac8732SStefano Zampini } 201b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,&S,schurstatus);CHKERRQ(ierr); 202b3cb21ddSStefano Zampini ierr = MatDestroy(&B);CHKERRQ(ierr); 203b3cb21ddSStefano Zampini ierr = MatDestroy(&X);CHKERRQ(ierr); 204b5fa320bSStefano Zampini PetscFunctionReturn(0); 205b5fa320bSStefano Zampini } 206b5fa320bSStefano Zampini 207b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsHandleSchur_Private(Mat F, PetscBool expansion) 208b5fa320bSStefano Zampini { 209b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 210b5fa320bSStefano Zampini PetscErrorCode ierr; 211b5fa320bSStefano Zampini 212b5fa320bSStefano Zampini PetscFunctionBegin; 213b5fa320bSStefano Zampini if (!mumps->id.ICNTL(19)) { /* do nothing when Schur complement has not been computed */ 214b5fa320bSStefano Zampini PetscFunctionReturn(0); 215b5fa320bSStefano Zampini } 216b8f61ee1SStefano Zampini if (!expansion) { /* prepare for the condensation step */ 217b5fa320bSStefano Zampini PetscInt sizeredrhs = mumps->id.nrhs*mumps->id.size_schur; 218b5fa320bSStefano Zampini /* allocate MUMPS internal array to store reduced right-hand sides */ 219b5fa320bSStefano Zampini if (!mumps->id.redrhs || sizeredrhs > mumps->sizeredrhs) { 220b5fa320bSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 221b5fa320bSStefano Zampini mumps->id.lredrhs = mumps->id.size_schur; 222b5fa320bSStefano Zampini ierr = PetscMalloc1(mumps->id.nrhs*mumps->id.lredrhs,&mumps->id.redrhs);CHKERRQ(ierr); 223b5fa320bSStefano Zampini mumps->sizeredrhs = mumps->id.nrhs*mumps->id.lredrhs; 224b5fa320bSStefano Zampini } 225b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 1; /* condensation phase */ 226b5fa320bSStefano Zampini } else { /* prepare for the expansion step */ 227b8f61ee1SStefano Zampini /* solve Schur complement (this has to be done by the MUMPS user, so basically us) */ 228b3cb21ddSStefano Zampini ierr = MatMumpsSolveSchur_Private(F);CHKERRQ(ierr); 229b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 2; /* expansion phase */ 2303ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 231b5fa320bSStefano Zampini if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 232b5fa320bSStefano Zampini /* restore defaults */ 233b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 234d3d598ffSStefano Zampini /* free MUMPS internal array for redrhs if we have solved for multiple rhs in order to save memory space */ 235d3d598ffSStefano Zampini if (mumps->id.nrhs > 1) { 236d3d598ffSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 237d3d598ffSStefano Zampini mumps->id.lredrhs = 0; 238d3d598ffSStefano Zampini mumps->sizeredrhs = 0; 239d3d598ffSStefano Zampini } 240b5fa320bSStefano Zampini } 241b5fa320bSStefano Zampini PetscFunctionReturn(0); 242b5fa320bSStefano Zampini } 243b5fa320bSStefano Zampini 244397b6df1SKris Buschelman /* 245d341cd04SHong Zhang MatConvertToTriples_A_B - convert Petsc matrix to triples: row[nz], col[nz], val[nz] 246d341cd04SHong Zhang 247397b6df1SKris Buschelman input: 24875480915SPierre Jolivet A - matrix in aij,baij or sbaij format 249397b6df1SKris Buschelman shift - 0: C style output triple; 1: Fortran style output triple. 250bccb9932SShri Abhyankar reuse - MAT_INITIAL_MATRIX: spaces are allocated and values are set for the triple 251bccb9932SShri Abhyankar MAT_REUSE_MATRIX: only the values in v array are updated 252397b6df1SKris Buschelman output: 253397b6df1SKris Buschelman nnz - dim of r, c, and v (number of local nonzero entries of A) 254397b6df1SKris Buschelman r, c, v - row and col index, matrix values (matrix triples) 255eb9baa12SBarry Smith 256eb9baa12SBarry Smith The returned values r, c, and sometimes v are obtained in a single PetscMalloc(). Then in MatDestroy_MUMPS() it is 2577ee00b23SStefano Zampini freed with PetscFree(mumps->irn); This is not ideal code, the fact that v is ONLY sometimes part of mumps->irn means 258eb9baa12SBarry Smith that the PetscMalloc() cannot easily be replaced with a PetscMalloc3(). 259eb9baa12SBarry Smith 260397b6df1SKris Buschelman */ 26116ebf90aSShri Abhyankar 262bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 263b24902e0SBarry Smith { 264a3d589ffSStefano Zampini const PetscScalar *av; 265185f6596SHong Zhang const PetscInt *ai,*aj,*ajj,M=A->rmap->n; 26667877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 267dfbe8321SBarry Smith PetscErrorCode ierr; 268c1490034SHong Zhang PetscInt *row,*col; 26916ebf90aSShri Abhyankar Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 270397b6df1SKris Buschelman 271397b6df1SKris Buschelman PetscFunctionBegin; 272a3d589ffSStefano Zampini ierr = MatSeqAIJGetArrayRead(A,&av);CHKERRQ(ierr); 273a3d589ffSStefano Zampini *v = (PetscScalar*)av; 274bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 2752205254eSKarl Rupp nz = aa->nz; 2762205254eSKarl Rupp ai = aa->i; 2772205254eSKarl Rupp aj = aa->j; 27816ebf90aSShri Abhyankar *nnz = nz; 279785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 280185f6596SHong Zhang col = row + nz; 281185f6596SHong Zhang 28216ebf90aSShri Abhyankar nz = 0; 28316ebf90aSShri Abhyankar for (i=0; i<M; i++) { 28416ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 28567877ebaSShri Abhyankar ajj = aj + ai[i]; 28667877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 28767877ebaSShri Abhyankar row[nz] = i+shift; col[nz++] = ajj[j] + shift; 28816ebf90aSShri Abhyankar } 28916ebf90aSShri Abhyankar } 29016ebf90aSShri Abhyankar *r = row; *c = col; 29116ebf90aSShri Abhyankar } 292a3d589ffSStefano Zampini ierr = MatSeqAIJRestoreArrayRead(A,&av);CHKERRQ(ierr); 29316ebf90aSShri Abhyankar PetscFunctionReturn(0); 29416ebf90aSShri Abhyankar } 295397b6df1SKris Buschelman 2967ee00b23SStefano Zampini PetscErrorCode MatConvertToTriples_seqsell_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 2977ee00b23SStefano Zampini { 2987ee00b23SStefano Zampini Mat_SeqSELL *a=(Mat_SeqSELL*)A->data; 2997ee00b23SStefano Zampini PetscInt *ptr; 3007ee00b23SStefano Zampini 3017ee00b23SStefano Zampini PetscFunctionBegin; 3027ee00b23SStefano Zampini *v = a->val; 3037ee00b23SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 3047ee00b23SStefano Zampini PetscInt nz,i,j,row; 3057ee00b23SStefano Zampini PetscErrorCode ierr; 3067ee00b23SStefano Zampini 3077ee00b23SStefano Zampini nz = a->sliidx[a->totalslices]; 3087ee00b23SStefano Zampini *nnz = nz; 3097ee00b23SStefano Zampini ierr = PetscMalloc1(2*nz, &ptr);CHKERRQ(ierr); 3107ee00b23SStefano Zampini *r = ptr; 3117ee00b23SStefano Zampini *c = ptr + nz; 3127ee00b23SStefano Zampini 3137ee00b23SStefano Zampini for (i=0; i<a->totalslices; i++) { 3147ee00b23SStefano Zampini for (j=a->sliidx[i],row=0; j<a->sliidx[i+1]; j++,row=((row+1)&0x07)) { 3157ee00b23SStefano Zampini *ptr++ = 8*i + row + shift; 3167ee00b23SStefano Zampini } 3177ee00b23SStefano Zampini } 3187ee00b23SStefano Zampini for (i=0;i<nz;i++) *ptr++ = a->colidx[i] + shift; 3197ee00b23SStefano Zampini } 3207ee00b23SStefano Zampini PetscFunctionReturn(0); 3217ee00b23SStefano Zampini } 3227ee00b23SStefano Zampini 323bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqbaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 32467877ebaSShri Abhyankar { 32567877ebaSShri Abhyankar Mat_SeqBAIJ *aa=(Mat_SeqBAIJ*)A->data; 32633d57670SJed Brown const PetscInt *ai,*aj,*ajj,bs2 = aa->bs2; 32733d57670SJed Brown PetscInt bs,M,nz,idx=0,rnz,i,j,k,m; 32867877ebaSShri Abhyankar PetscErrorCode ierr; 32967877ebaSShri Abhyankar PetscInt *row,*col; 33067877ebaSShri Abhyankar 33167877ebaSShri Abhyankar PetscFunctionBegin; 33233d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 33333d57670SJed Brown M = A->rmap->N/bs; 334cf3759fdSShri Abhyankar *v = aa->a; 335bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 336cf3759fdSShri Abhyankar ai = aa->i; aj = aa->j; 33767877ebaSShri Abhyankar nz = bs2*aa->nz; 33867877ebaSShri Abhyankar *nnz = nz; 339785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 340185f6596SHong Zhang col = row + nz; 341185f6596SHong Zhang 34267877ebaSShri Abhyankar for (i=0; i<M; i++) { 34367877ebaSShri Abhyankar ajj = aj + ai[i]; 34467877ebaSShri Abhyankar rnz = ai[i+1] - ai[i]; 34567877ebaSShri Abhyankar for (k=0; k<rnz; k++) { 34667877ebaSShri Abhyankar for (j=0; j<bs; j++) { 34767877ebaSShri Abhyankar for (m=0; m<bs; m++) { 34867877ebaSShri Abhyankar row[idx] = i*bs + m + shift; 349cf3759fdSShri Abhyankar col[idx++] = bs*(ajj[k]) + j + shift; 35067877ebaSShri Abhyankar } 35167877ebaSShri Abhyankar } 35267877ebaSShri Abhyankar } 35367877ebaSShri Abhyankar } 354cf3759fdSShri Abhyankar *r = row; *c = col; 35567877ebaSShri Abhyankar } 35667877ebaSShri Abhyankar PetscFunctionReturn(0); 35767877ebaSShri Abhyankar } 35867877ebaSShri Abhyankar 359bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqsbaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r,int **c,PetscScalar **v) 36016ebf90aSShri Abhyankar { 36175480915SPierre Jolivet const PetscInt *ai, *aj,*ajj; 36275480915SPierre Jolivet PetscInt nz,rnz,i,j,k,m,bs; 36316ebf90aSShri Abhyankar PetscErrorCode ierr; 36416ebf90aSShri Abhyankar PetscInt *row,*col; 36575480915SPierre Jolivet PetscScalar *val; 36616ebf90aSShri Abhyankar Mat_SeqSBAIJ *aa=(Mat_SeqSBAIJ*)A->data; 36775480915SPierre Jolivet const PetscInt bs2=aa->bs2,mbs=aa->mbs; 36838548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 36938548759SBarry Smith PetscBool hermitian; 37038548759SBarry Smith #endif 37116ebf90aSShri Abhyankar 37216ebf90aSShri Abhyankar PetscFunctionBegin; 37338548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 37438548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 37538548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 37638548759SBarry Smith #endif 3772205254eSKarl Rupp ai = aa->i; 3782205254eSKarl Rupp aj = aa->j; 37975480915SPierre Jolivet ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 38075480915SPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) { 38175480915SPierre Jolivet nz = aa->nz; 382a81fe166SPierre Jolivet ierr = PetscMalloc((2*bs2*nz*sizeof(PetscInt)+(bs>1?bs2*nz*sizeof(PetscScalar):0)), &row);CHKERRQ(ierr); 38375480915SPierre Jolivet col = row + bs2*nz; 384574ea4fdSPierre Jolivet if (bs>1) val = (PetscScalar*)(col + bs2*nz); 385574ea4fdSPierre Jolivet else val = aa->a; 38675480915SPierre Jolivet 38775480915SPierre Jolivet *r = row; *c = col; *v = val; 38875480915SPierre Jolivet } else { 389574ea4fdSPierre Jolivet if (bs == 1) *v = aa->a; 39075480915SPierre Jolivet row = *r; col = *c; val = *v; 39175480915SPierre Jolivet } 392185f6596SHong Zhang 39316ebf90aSShri Abhyankar nz = 0; 394a81fe166SPierre Jolivet if (bs>1) { 39575480915SPierre Jolivet for (i=0; i<mbs; i++) { 39616ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 39767877ebaSShri Abhyankar ajj = aj + ai[i]; 39875480915SPierre Jolivet for (j=0; j<rnz; j++) { 39975480915SPierre Jolivet for (k=0; k<bs; k++) { 40075480915SPierre Jolivet for (m=0; m<bs; m++) { 401ec4f40fdSPierre Jolivet if (ajj[j]>i || k>=m) { 40275480915SPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) { 40375480915SPierre Jolivet row[nz] = i*bs + m + shift; 40475480915SPierre Jolivet col[nz] = ajj[j]*bs + k + shift; 40575480915SPierre Jolivet } 40675480915SPierre Jolivet val[nz++] = aa->a[(ai[i]+j)*bs2 + m + k*bs]; 40775480915SPierre Jolivet } 40875480915SPierre Jolivet } 40975480915SPierre Jolivet } 41075480915SPierre Jolivet } 41175480915SPierre Jolivet } 412a81fe166SPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) { 413a81fe166SPierre Jolivet for (i=0; i<mbs; i++) { 414a81fe166SPierre Jolivet rnz = ai[i+1] - ai[i]; 415a81fe166SPierre Jolivet ajj = aj + ai[i]; 416a81fe166SPierre Jolivet for (j=0; j<rnz; j++) { 417a81fe166SPierre Jolivet row[nz] = i+shift; col[nz++] = ajj[j] + shift; 418a81fe166SPierre Jolivet } 419a81fe166SPierre Jolivet } 420a81fe166SPierre Jolivet if (nz != aa->nz) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Different numbers of nonzeros %D != %D",nz,aa->nz); 42175480915SPierre Jolivet } 422574ea4fdSPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) *nnz = nz; 42316ebf90aSShri Abhyankar PetscFunctionReturn(0); 42416ebf90aSShri Abhyankar } 42516ebf90aSShri Abhyankar 426bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 42716ebf90aSShri Abhyankar { 42867877ebaSShri Abhyankar const PetscInt *ai,*aj,*ajj,*adiag,M=A->rmap->n; 42967877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 43067877ebaSShri Abhyankar const PetscScalar *av,*v1; 43116ebf90aSShri Abhyankar PetscScalar *val; 43216ebf90aSShri Abhyankar PetscErrorCode ierr; 43316ebf90aSShri Abhyankar PetscInt *row,*col; 434829b1710SHong Zhang Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 43529b521d4Sstefano_zampini PetscBool missing; 43638548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 43738548759SBarry Smith PetscBool hermitian; 43838548759SBarry Smith #endif 43916ebf90aSShri Abhyankar 44016ebf90aSShri Abhyankar PetscFunctionBegin; 44138548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 44238548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 44338548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 44438548759SBarry Smith #endif 445a3d589ffSStefano Zampini ierr = MatSeqAIJGetArrayRead(A,&av);CHKERRQ(ierr); 446a3d589ffSStefano Zampini ai = aa->i; aj = aa->j; 44716ebf90aSShri Abhyankar adiag = aa->diag; 44829b521d4Sstefano_zampini ierr = MatMissingDiagonal_SeqAIJ(A,&missing,&i);CHKERRQ(ierr); 449bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 4507ee00b23SStefano Zampini /* count nz in the upper triangular part of A */ 451829b1710SHong Zhang nz = 0; 45229b521d4Sstefano_zampini if (missing) { 45329b521d4Sstefano_zampini for (i=0; i<M; i++) { 45429b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 45529b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 45629b521d4Sstefano_zampini if (aj[j] < i) continue; 45729b521d4Sstefano_zampini nz++; 45829b521d4Sstefano_zampini } 45929b521d4Sstefano_zampini } else { 46029b521d4Sstefano_zampini nz += ai[i+1] - adiag[i]; 46129b521d4Sstefano_zampini } 46229b521d4Sstefano_zampini } 46329b521d4Sstefano_zampini } else { 464829b1710SHong Zhang for (i=0; i<M; i++) nz += ai[i+1] - adiag[i]; 46529b521d4Sstefano_zampini } 46616ebf90aSShri Abhyankar *nnz = nz; 467829b1710SHong Zhang 468185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 469185f6596SHong Zhang col = row + nz; 470185f6596SHong Zhang val = (PetscScalar*)(col + nz); 471185f6596SHong Zhang 47216ebf90aSShri Abhyankar nz = 0; 47329b521d4Sstefano_zampini if (missing) { 47429b521d4Sstefano_zampini for (i=0; i<M; i++) { 47529b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 47629b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 47729b521d4Sstefano_zampini if (aj[j] < i) continue; 47829b521d4Sstefano_zampini row[nz] = i+shift; 47929b521d4Sstefano_zampini col[nz] = aj[j]+shift; 48029b521d4Sstefano_zampini val[nz] = av[j]; 48129b521d4Sstefano_zampini nz++; 48229b521d4Sstefano_zampini } 48329b521d4Sstefano_zampini } else { 48429b521d4Sstefano_zampini rnz = ai[i+1] - adiag[i]; 48529b521d4Sstefano_zampini ajj = aj + adiag[i]; 48629b521d4Sstefano_zampini v1 = av + adiag[i]; 48729b521d4Sstefano_zampini for (j=0; j<rnz; j++) { 48829b521d4Sstefano_zampini row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 48929b521d4Sstefano_zampini } 49029b521d4Sstefano_zampini } 49129b521d4Sstefano_zampini } 49229b521d4Sstefano_zampini } else { 49316ebf90aSShri Abhyankar for (i=0; i<M; i++) { 49416ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 49567877ebaSShri Abhyankar ajj = aj + adiag[i]; 496cf3759fdSShri Abhyankar v1 = av + adiag[i]; 49767877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 49867877ebaSShri Abhyankar row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 49916ebf90aSShri Abhyankar } 50016ebf90aSShri Abhyankar } 50129b521d4Sstefano_zampini } 50216ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 503397b6df1SKris Buschelman } else { 50416ebf90aSShri Abhyankar nz = 0; val = *v; 50529b521d4Sstefano_zampini if (missing) { 50616ebf90aSShri Abhyankar for (i=0; i <M; i++) { 50729b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 50829b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 50929b521d4Sstefano_zampini if (aj[j] < i) continue; 51029b521d4Sstefano_zampini val[nz++] = av[j]; 51129b521d4Sstefano_zampini } 51229b521d4Sstefano_zampini } else { 51316ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 51467877ebaSShri Abhyankar v1 = av + adiag[i]; 51567877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 51667877ebaSShri Abhyankar val[nz++] = v1[j]; 51716ebf90aSShri Abhyankar } 51816ebf90aSShri Abhyankar } 51916ebf90aSShri Abhyankar } 52029b521d4Sstefano_zampini } else { 52116ebf90aSShri Abhyankar for (i=0; i <M; i++) { 52216ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 52316ebf90aSShri Abhyankar v1 = av + adiag[i]; 52416ebf90aSShri Abhyankar for (j=0; j<rnz; j++) { 52516ebf90aSShri Abhyankar val[nz++] = v1[j]; 52616ebf90aSShri Abhyankar } 52716ebf90aSShri Abhyankar } 52816ebf90aSShri Abhyankar } 52929b521d4Sstefano_zampini } 530a3d589ffSStefano Zampini ierr = MatSeqAIJRestoreArrayRead(A,&av);CHKERRQ(ierr); 53116ebf90aSShri Abhyankar PetscFunctionReturn(0); 53216ebf90aSShri Abhyankar } 53316ebf90aSShri Abhyankar 534bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpisbaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r,int **c, PetscScalar **v) 53516ebf90aSShri Abhyankar { 536ec4f40fdSPierre Jolivet const PetscInt *ai,*aj,*bi,*bj,*garray,*ajj,*bjj; 53716ebf90aSShri Abhyankar PetscErrorCode ierr; 538ec4f40fdSPierre Jolivet PetscInt rstart,nz,bs,i,j,k,m,jj,irow,countA,countB; 53916ebf90aSShri Abhyankar PetscInt *row,*col; 54016ebf90aSShri Abhyankar const PetscScalar *av,*bv,*v1,*v2; 54116ebf90aSShri Abhyankar PetscScalar *val; 542397b6df1SKris Buschelman Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)A->data; 543397b6df1SKris Buschelman Mat_SeqSBAIJ *aa = (Mat_SeqSBAIJ*)(mat->A)->data; 544397b6df1SKris Buschelman Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 545ec4f40fdSPierre Jolivet const PetscInt bs2=aa->bs2,mbs=aa->mbs; 54638548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 54738548759SBarry Smith PetscBool hermitian; 54838548759SBarry Smith #endif 54916ebf90aSShri Abhyankar 55016ebf90aSShri Abhyankar PetscFunctionBegin; 55138548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 55238548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 55338548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 55438548759SBarry Smith #endif 555ec4f40fdSPierre Jolivet ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 55638548759SBarry Smith rstart = A->rmap->rstart; 55738548759SBarry Smith ai = aa->i; 55838548759SBarry Smith aj = aa->j; 55938548759SBarry Smith bi = bb->i; 56038548759SBarry Smith bj = bb->j; 56138548759SBarry Smith av = aa->a; 56238548759SBarry Smith bv = bb->a; 563397b6df1SKris Buschelman 5642205254eSKarl Rupp garray = mat->garray; 5652205254eSKarl Rupp 566bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 56716ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 568ec4f40fdSPierre Jolivet ierr = PetscMalloc((2*bs2*nz*sizeof(PetscInt)+bs2*nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 569ec4f40fdSPierre Jolivet col = row + bs2*nz; 570ec4f40fdSPierre Jolivet val = (PetscScalar*)(col + bs2*nz); 571185f6596SHong Zhang 572397b6df1SKris Buschelman *r = row; *c = col; *v = val; 573397b6df1SKris Buschelman } else { 574397b6df1SKris Buschelman row = *r; col = *c; val = *v; 575397b6df1SKris Buschelman } 576397b6df1SKris Buschelman 577028e57e8SHong Zhang jj = 0; irow = rstart; 578ec4f40fdSPierre Jolivet for (i=0; i<mbs; i++) { 579397b6df1SKris Buschelman ajj = aj + ai[i]; /* ptr to the beginning of this row */ 580397b6df1SKris Buschelman countA = ai[i+1] - ai[i]; 581397b6df1SKris Buschelman countB = bi[i+1] - bi[i]; 582397b6df1SKris Buschelman bjj = bj + bi[i]; 583ec4f40fdSPierre Jolivet v1 = av + ai[i]*bs2; 584ec4f40fdSPierre Jolivet v2 = bv + bi[i]*bs2; 585397b6df1SKris Buschelman 586ec4f40fdSPierre Jolivet if (bs>1) { 587ec4f40fdSPierre Jolivet /* A-part */ 588ec4f40fdSPierre Jolivet for (j=0; j<countA; j++) { 589ec4f40fdSPierre Jolivet for (k=0; k<bs; k++) { 590ec4f40fdSPierre Jolivet for (m=0; m<bs; m++) { 591ec4f40fdSPierre Jolivet if (rstart + ajj[j]*bs>irow || k>=m) { 592ec4f40fdSPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) { 593ec4f40fdSPierre Jolivet row[jj] = irow + m + shift; col[jj] = rstart + ajj[j]*bs + k + shift; 594ec4f40fdSPierre Jolivet } 595ec4f40fdSPierre Jolivet val[jj++] = v1[j*bs2 + m + k*bs]; 596ec4f40fdSPierre Jolivet } 597ec4f40fdSPierre Jolivet } 598ec4f40fdSPierre Jolivet } 599ec4f40fdSPierre Jolivet } 600ec4f40fdSPierre Jolivet 601ec4f40fdSPierre Jolivet /* B-part */ 602ec4f40fdSPierre Jolivet for (j=0; j < countB; j++) { 603ec4f40fdSPierre Jolivet for (k=0; k<bs; k++) { 604ec4f40fdSPierre Jolivet for (m=0; m<bs; m++) { 605ec4f40fdSPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) { 606ec4f40fdSPierre Jolivet row[jj] = irow + m + shift; col[jj] = garray[bjj[j]]*bs + k + shift; 607ec4f40fdSPierre Jolivet } 608ec4f40fdSPierre Jolivet val[jj++] = v2[j*bs2 + m + k*bs]; 609ec4f40fdSPierre Jolivet } 610ec4f40fdSPierre Jolivet } 611ec4f40fdSPierre Jolivet } 612ec4f40fdSPierre Jolivet } else { 613397b6df1SKris Buschelman /* A-part */ 614397b6df1SKris Buschelman for (j=0; j<countA; j++) { 615bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 616397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 617397b6df1SKris Buschelman } 61816ebf90aSShri Abhyankar val[jj++] = v1[j]; 619397b6df1SKris Buschelman } 62016ebf90aSShri Abhyankar 62116ebf90aSShri Abhyankar /* B-part */ 62216ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 623bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 624397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 625397b6df1SKris Buschelman } 62616ebf90aSShri Abhyankar val[jj++] = v2[j]; 62716ebf90aSShri Abhyankar } 62816ebf90aSShri Abhyankar } 629ec4f40fdSPierre Jolivet irow+=bs; 630ec4f40fdSPierre Jolivet } 631ec4f40fdSPierre Jolivet *nnz = jj; 63216ebf90aSShri Abhyankar PetscFunctionReturn(0); 63316ebf90aSShri Abhyankar } 63416ebf90aSShri Abhyankar 635bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 63616ebf90aSShri Abhyankar { 63716ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 63816ebf90aSShri Abhyankar PetscErrorCode ierr; 63916ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 64016ebf90aSShri Abhyankar PetscInt *row,*col; 64116ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 64216ebf90aSShri Abhyankar PetscScalar *val; 643a3d589ffSStefano Zampini Mat Ad,Ao; 644a3d589ffSStefano Zampini Mat_SeqAIJ *aa; 645a3d589ffSStefano Zampini Mat_SeqAIJ *bb; 64616ebf90aSShri Abhyankar 64716ebf90aSShri Abhyankar PetscFunctionBegin; 648a3d589ffSStefano Zampini ierr = MatMPIAIJGetSeqAIJ(A,&Ad,&Ao,&garray);CHKERRQ(ierr); 649a3d589ffSStefano Zampini ierr = MatSeqAIJGetArrayRead(Ad,&av);CHKERRQ(ierr); 650a3d589ffSStefano Zampini ierr = MatSeqAIJGetArrayRead(Ao,&bv);CHKERRQ(ierr); 651a3d589ffSStefano Zampini 652a3d589ffSStefano Zampini aa = (Mat_SeqAIJ*)(Ad)->data; 653a3d589ffSStefano Zampini bb = (Mat_SeqAIJ*)(Ao)->data; 65438548759SBarry Smith ai = aa->i; 65538548759SBarry Smith aj = aa->j; 65638548759SBarry Smith bi = bb->i; 65738548759SBarry Smith bj = bb->j; 65816ebf90aSShri Abhyankar 659a3d589ffSStefano Zampini rstart = A->rmap->rstart; 6602205254eSKarl Rupp 661bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 66216ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 66316ebf90aSShri Abhyankar *nnz = nz; 664185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 665185f6596SHong Zhang col = row + nz; 666185f6596SHong Zhang val = (PetscScalar*)(col + nz); 667185f6596SHong Zhang 66816ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 66916ebf90aSShri Abhyankar } else { 67016ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 67116ebf90aSShri Abhyankar } 67216ebf90aSShri Abhyankar 67316ebf90aSShri Abhyankar jj = 0; irow = rstart; 67416ebf90aSShri Abhyankar for (i=0; i<m; i++) { 67516ebf90aSShri Abhyankar ajj = aj + ai[i]; /* ptr to the beginning of this row */ 67616ebf90aSShri Abhyankar countA = ai[i+1] - ai[i]; 67716ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 67816ebf90aSShri Abhyankar bjj = bj + bi[i]; 67916ebf90aSShri Abhyankar v1 = av + ai[i]; 68016ebf90aSShri Abhyankar v2 = bv + bi[i]; 68116ebf90aSShri Abhyankar 68216ebf90aSShri Abhyankar /* A-part */ 68316ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 684bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 68516ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 68616ebf90aSShri Abhyankar } 68716ebf90aSShri Abhyankar val[jj++] = v1[j]; 68816ebf90aSShri Abhyankar } 68916ebf90aSShri Abhyankar 69016ebf90aSShri Abhyankar /* B-part */ 69116ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 692bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 69316ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 69416ebf90aSShri Abhyankar } 69516ebf90aSShri Abhyankar val[jj++] = v2[j]; 69616ebf90aSShri Abhyankar } 69716ebf90aSShri Abhyankar irow++; 69816ebf90aSShri Abhyankar } 699a3d589ffSStefano Zampini ierr = MatSeqAIJRestoreArrayRead(Ad,&av);CHKERRQ(ierr); 700a3d589ffSStefano Zampini ierr = MatSeqAIJRestoreArrayRead(Ao,&bv);CHKERRQ(ierr); 70116ebf90aSShri Abhyankar PetscFunctionReturn(0); 70216ebf90aSShri Abhyankar } 70316ebf90aSShri Abhyankar 704bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpibaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 70567877ebaSShri Abhyankar { 70667877ebaSShri Abhyankar Mat_MPIBAIJ *mat = (Mat_MPIBAIJ*)A->data; 70767877ebaSShri Abhyankar Mat_SeqBAIJ *aa = (Mat_SeqBAIJ*)(mat->A)->data; 70867877ebaSShri Abhyankar Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 70967877ebaSShri Abhyankar const PetscInt *ai = aa->i, *bi = bb->i, *aj = aa->j, *bj = bb->j,*ajj, *bjj; 710d985c460SShri Abhyankar const PetscInt *garray = mat->garray,mbs=mat->mbs,rstart=A->rmap->rstart; 71133d57670SJed Brown const PetscInt bs2=mat->bs2; 71267877ebaSShri Abhyankar PetscErrorCode ierr; 71333d57670SJed Brown PetscInt bs,nz,i,j,k,n,jj,irow,countA,countB,idx; 71467877ebaSShri Abhyankar PetscInt *row,*col; 71567877ebaSShri Abhyankar const PetscScalar *av=aa->a, *bv=bb->a,*v1,*v2; 71667877ebaSShri Abhyankar PetscScalar *val; 71767877ebaSShri Abhyankar 71867877ebaSShri Abhyankar PetscFunctionBegin; 71933d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 720bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 72167877ebaSShri Abhyankar nz = bs2*(aa->nz + bb->nz); 72267877ebaSShri Abhyankar *nnz = nz; 723185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 724185f6596SHong Zhang col = row + nz; 725185f6596SHong Zhang val = (PetscScalar*)(col + nz); 726185f6596SHong Zhang 72767877ebaSShri Abhyankar *r = row; *c = col; *v = val; 72867877ebaSShri Abhyankar } else { 72967877ebaSShri Abhyankar row = *r; col = *c; val = *v; 73067877ebaSShri Abhyankar } 73167877ebaSShri Abhyankar 732d985c460SShri Abhyankar jj = 0; irow = rstart; 73367877ebaSShri Abhyankar for (i=0; i<mbs; i++) { 73467877ebaSShri Abhyankar countA = ai[i+1] - ai[i]; 73567877ebaSShri Abhyankar countB = bi[i+1] - bi[i]; 73667877ebaSShri Abhyankar ajj = aj + ai[i]; 73767877ebaSShri Abhyankar bjj = bj + bi[i]; 73867877ebaSShri Abhyankar v1 = av + bs2*ai[i]; 73967877ebaSShri Abhyankar v2 = bv + bs2*bi[i]; 74067877ebaSShri Abhyankar 74167877ebaSShri Abhyankar idx = 0; 74267877ebaSShri Abhyankar /* A-part */ 74367877ebaSShri Abhyankar for (k=0; k<countA; k++) { 74467877ebaSShri Abhyankar for (j=0; j<bs; j++) { 74567877ebaSShri Abhyankar for (n=0; n<bs; n++) { 746bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 747d985c460SShri Abhyankar row[jj] = irow + n + shift; 748d985c460SShri Abhyankar col[jj] = rstart + bs*ajj[k] + j + shift; 74967877ebaSShri Abhyankar } 75067877ebaSShri Abhyankar val[jj++] = v1[idx++]; 75167877ebaSShri Abhyankar } 75267877ebaSShri Abhyankar } 75367877ebaSShri Abhyankar } 75467877ebaSShri Abhyankar 75567877ebaSShri Abhyankar idx = 0; 75667877ebaSShri Abhyankar /* B-part */ 75767877ebaSShri Abhyankar for (k=0; k<countB; k++) { 75867877ebaSShri Abhyankar for (j=0; j<bs; j++) { 75967877ebaSShri Abhyankar for (n=0; n<bs; n++) { 760bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 761d985c460SShri Abhyankar row[jj] = irow + n + shift; 762d985c460SShri Abhyankar col[jj] = bs*garray[bjj[k]] + j + shift; 76367877ebaSShri Abhyankar } 764d985c460SShri Abhyankar val[jj++] = v2[idx++]; 76567877ebaSShri Abhyankar } 76667877ebaSShri Abhyankar } 76767877ebaSShri Abhyankar } 768d985c460SShri Abhyankar irow += bs; 76967877ebaSShri Abhyankar } 77067877ebaSShri Abhyankar PetscFunctionReturn(0); 77167877ebaSShri Abhyankar } 77267877ebaSShri Abhyankar 773bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 77416ebf90aSShri Abhyankar { 77516ebf90aSShri Abhyankar const PetscInt *ai, *aj,*adiag, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 77616ebf90aSShri Abhyankar PetscErrorCode ierr; 777e0bace9bSHong Zhang PetscInt rstart,nz,nza,nzb,i,j,jj,irow,countA,countB; 77816ebf90aSShri Abhyankar PetscInt *row,*col; 77916ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 78016ebf90aSShri Abhyankar PetscScalar *val; 781a3d589ffSStefano Zampini Mat Ad,Ao; 782a3d589ffSStefano Zampini Mat_SeqAIJ *aa; 783a3d589ffSStefano Zampini Mat_SeqAIJ *bb; 78438548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 78538548759SBarry Smith PetscBool hermitian; 78638548759SBarry Smith #endif 78716ebf90aSShri Abhyankar 78816ebf90aSShri Abhyankar PetscFunctionBegin; 78938548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 79038548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 79138548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 79238548759SBarry Smith #endif 793a3d589ffSStefano Zampini ierr = MatMPIAIJGetSeqAIJ(A,&Ad,&Ao,&garray);CHKERRQ(ierr); 794a3d589ffSStefano Zampini ierr = MatSeqAIJGetArrayRead(Ad,&av);CHKERRQ(ierr); 795a3d589ffSStefano Zampini ierr = MatSeqAIJGetArrayRead(Ao,&bv);CHKERRQ(ierr); 796a3d589ffSStefano Zampini 797a3d589ffSStefano Zampini aa = (Mat_SeqAIJ*)(Ad)->data; 798a3d589ffSStefano Zampini bb = (Mat_SeqAIJ*)(Ao)->data; 79938548759SBarry Smith ai = aa->i; 80038548759SBarry Smith aj = aa->j; 80138548759SBarry Smith adiag = aa->diag; 80238548759SBarry Smith bi = bb->i; 80338548759SBarry Smith bj = bb->j; 8042205254eSKarl Rupp 80516ebf90aSShri Abhyankar rstart = A->rmap->rstart; 80616ebf90aSShri Abhyankar 807bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 808e0bace9bSHong Zhang nza = 0; /* num of upper triangular entries in mat->A, including diagonals */ 809e0bace9bSHong Zhang nzb = 0; /* num of upper triangular entries in mat->B */ 81016ebf90aSShri Abhyankar for (i=0; i<m; i++) { 811e0bace9bSHong Zhang nza += (ai[i+1] - adiag[i]); 81216ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 81316ebf90aSShri Abhyankar bjj = bj + bi[i]; 814e0bace9bSHong Zhang for (j=0; j<countB; j++) { 815e0bace9bSHong Zhang if (garray[bjj[j]] > rstart) nzb++; 816e0bace9bSHong Zhang } 817e0bace9bSHong Zhang } 81816ebf90aSShri Abhyankar 819e0bace9bSHong Zhang nz = nza + nzb; /* total nz of upper triangular part of mat */ 82016ebf90aSShri Abhyankar *nnz = nz; 821185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 822185f6596SHong Zhang col = row + nz; 823185f6596SHong Zhang val = (PetscScalar*)(col + nz); 824185f6596SHong Zhang 82516ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 82616ebf90aSShri Abhyankar } else { 82716ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 82816ebf90aSShri Abhyankar } 82916ebf90aSShri Abhyankar 83016ebf90aSShri Abhyankar jj = 0; irow = rstart; 83116ebf90aSShri Abhyankar for (i=0; i<m; i++) { 83216ebf90aSShri Abhyankar ajj = aj + adiag[i]; /* ptr to the beginning of the diagonal of this row */ 83316ebf90aSShri Abhyankar v1 = av + adiag[i]; 83416ebf90aSShri Abhyankar countA = ai[i+1] - adiag[i]; 83516ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 83616ebf90aSShri Abhyankar bjj = bj + bi[i]; 83716ebf90aSShri Abhyankar v2 = bv + bi[i]; 83816ebf90aSShri Abhyankar 83916ebf90aSShri Abhyankar /* A-part */ 84016ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 841bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 84216ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 84316ebf90aSShri Abhyankar } 84416ebf90aSShri Abhyankar val[jj++] = v1[j]; 84516ebf90aSShri Abhyankar } 84616ebf90aSShri Abhyankar 84716ebf90aSShri Abhyankar /* B-part */ 84816ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 84916ebf90aSShri Abhyankar if (garray[bjj[j]] > rstart) { 850bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 85116ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 85216ebf90aSShri Abhyankar } 85316ebf90aSShri Abhyankar val[jj++] = v2[j]; 85416ebf90aSShri Abhyankar } 855397b6df1SKris Buschelman } 856397b6df1SKris Buschelman irow++; 857397b6df1SKris Buschelman } 858a3d589ffSStefano Zampini ierr = MatSeqAIJRestoreArrayRead(Ad,&av);CHKERRQ(ierr); 859a3d589ffSStefano Zampini ierr = MatSeqAIJRestoreArrayRead(Ao,&bv);CHKERRQ(ierr); 860397b6df1SKris Buschelman PetscFunctionReturn(0); 861397b6df1SKris Buschelman } 862397b6df1SKris Buschelman 863dfbe8321SBarry Smith PetscErrorCode MatDestroy_MUMPS(Mat A) 864dfbe8321SBarry Smith { 865e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 866dfbe8321SBarry Smith PetscErrorCode ierr; 867b24902e0SBarry Smith 868397b6df1SKris Buschelman PetscFunctionBegin; 869a5e57a09SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 870a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_rhs);CHKERRQ(ierr); 871a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 872801fbe65SHong Zhang ierr = VecDestroy(&mumps->b_seq);CHKERRQ(ierr); 873a5e57a09SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 874a5e57a09SHong Zhang ierr = PetscFree(mumps->id.perm_in);CHKERRQ(ierr); 875a5e57a09SHong Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); 876b34f08ffSHong Zhang ierr = PetscFree(mumps->info);CHKERRQ(ierr); 87759ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 878a5e57a09SHong Zhang mumps->id.job = JOB_END; 8793ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 8806c62bb2dSHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in MatDestroy_MUMPS: INFOG(1)=%d\n",mumps->id.INFOG(1)); 8813ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 8823ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { ierr = PetscOmpCtrlDestroy(&mumps->omp_ctrl);CHKERRQ(ierr); } 8833ab56b82SJunchao Zhang #endif 8843ab56b82SJunchao Zhang ierr = PetscFree2(mumps->recvcount,mumps->displs);CHKERRQ(ierr); 885e69c285eSBarry Smith ierr = PetscFree(A->data);CHKERRQ(ierr); 886bf0cc555SLisandro Dalcin 88797969023SHong Zhang /* clear composed functions */ 8883ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 8895a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSetSchurIS_C",NULL);CHKERRQ(ierr); 8905a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorCreateSchurComplement_C",NULL);CHKERRQ(ierr); 891bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetIcntl_C",NULL);CHKERRQ(ierr); 892bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetIcntl_C",NULL);CHKERRQ(ierr); 893bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetCntl_C",NULL);CHKERRQ(ierr); 894bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetCntl_C",NULL);CHKERRQ(ierr); 895ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfo_C",NULL);CHKERRQ(ierr); 896ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfog_C",NULL);CHKERRQ(ierr); 897ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfo_C",NULL);CHKERRQ(ierr); 898ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfog_C",NULL);CHKERRQ(ierr); 89989a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverse_C",NULL);CHKERRQ(ierr); 9000e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverseTranspose_C",NULL);CHKERRQ(ierr); 901397b6df1SKris Buschelman PetscFunctionReturn(0); 902397b6df1SKris Buschelman } 903397b6df1SKris Buschelman 904b24902e0SBarry Smith PetscErrorCode MatSolve_MUMPS(Mat A,Vec b,Vec x) 905b24902e0SBarry Smith { 906e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 907d54de34fSKris Buschelman PetscScalar *array; 90867877ebaSShri Abhyankar Vec b_seq; 909329ec9b3SHong Zhang IS is_iden,is_petsc; 910dfbe8321SBarry Smith PetscErrorCode ierr; 911329ec9b3SHong Zhang PetscInt i; 912cc86f929SStefano Zampini PetscBool second_solve = PETSC_FALSE; 913883f2eb9SBarry Smith static PetscBool cite1 = PETSC_FALSE,cite2 = PETSC_FALSE; 914397b6df1SKris Buschelman 915397b6df1SKris Buschelman PetscFunctionBegin; 916883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS01,\n author = {P.~R. Amestoy and I.~S. Duff and J.-Y. L'Excellent and J. Koster},\n title = {A fully asynchronous multifrontal solver using distributed dynamic scheduling},\n journal = {SIAM Journal on Matrix Analysis and Applications},\n volume = {23},\n number = {1},\n pages = {15--41},\n year = {2001}\n}\n",&cite1);CHKERRQ(ierr); 917883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS02,\n author = {P.~R. Amestoy and A. Guermouche and J.-Y. L'Excellent and S. Pralet},\n title = {Hybrid scheduling for the parallel solution of linear systems},\n journal = {Parallel Computing},\n volume = {32},\n number = {2},\n pages = {136--156},\n year = {2006}\n}\n",&cite2);CHKERRQ(ierr); 9182aca8efcSHong Zhang 919603e8f96SBarry Smith if (A->factorerrortype) { 9202aca8efcSHong Zhang ierr = PetscInfo2(A,"MatSolve is called with singular matrix factor, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 9212aca8efcSHong Zhang ierr = VecSetInf(x);CHKERRQ(ierr); 9222aca8efcSHong Zhang PetscFunctionReturn(0); 9232aca8efcSHong Zhang } 9242aca8efcSHong Zhang 925be818407SHong Zhang mumps->id.ICNTL(20) = 0; /* dense RHS */ 926a5e57a09SHong Zhang mumps->id.nrhs = 1; 927a5e57a09SHong Zhang b_seq = mumps->b_seq; 9282d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 929329ec9b3SHong Zhang /* MUMPS only supports centralized rhs. Scatter b into a seqential rhs vector */ 930a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 931a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 932a5e57a09SHong Zhang if (!mumps->myid) {ierr = VecGetArray(b_seq,&array);CHKERRQ(ierr);} 9333ab56b82SJunchao Zhang } else { /* petsc_size == 1 */ 934397b6df1SKris Buschelman ierr = VecCopy(b,x);CHKERRQ(ierr); 935397b6df1SKris Buschelman ierr = VecGetArray(x,&array);CHKERRQ(ierr); 936397b6df1SKris Buschelman } 937a5e57a09SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 938a5e57a09SHong Zhang mumps->id.nrhs = 1; 939940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)array; 940397b6df1SKris Buschelman } 941397b6df1SKris Buschelman 942cc86f929SStefano Zampini /* 943cc86f929SStefano Zampini handle condensation step of Schur complement (if any) 944cc86f929SStefano Zampini We set by default ICNTL(26) == -1 when Schur indices have been provided by the user. 945cc86f929SStefano Zampini According to MUMPS (5.0.0) manual, any value should be harmful during the factorization phase 946cc86f929SStefano Zampini Unless the user provides a valid value for ICNTL(26), MatSolve and MatMatSolve routines solve the full system. 947cc86f929SStefano Zampini This requires an extra call to PetscMUMPS_c and the computation of the factors for S 948cc86f929SStefano Zampini */ 949583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 9502d4298aeSJunchao Zhang if (mumps->petsc_size > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 951cc86f929SStefano Zampini second_solve = PETSC_TRUE; 952b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 953cc86f929SStefano Zampini } 954397b6df1SKris Buschelman /* solve phase */ 955329ec9b3SHong Zhang /*-------------*/ 956a5e57a09SHong Zhang mumps->id.job = JOB_SOLVE; 9573ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 958a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 959397b6df1SKris Buschelman 960b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 961cc86f929SStefano Zampini if (second_solve) { 962b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 963cc86f929SStefano Zampini } 964b5fa320bSStefano Zampini 9652d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { /* convert mumps distributed solution to petsc mpi x */ 966a5e57a09SHong Zhang if (mumps->scat_sol && mumps->ICNTL9_pre != mumps->id.ICNTL(9)) { 967a5e57a09SHong Zhang /* when id.ICNTL(9) changes, the contents of lsol_loc may change (not its size, lsol_loc), recreates scat_sol */ 968a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 969397b6df1SKris Buschelman } 970a5e57a09SHong Zhang if (!mumps->scat_sol) { /* create scatter scat_sol */ 971a5e57a09SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,mumps->id.lsol_loc,0,1,&is_iden);CHKERRQ(ierr); /* from */ 972a5e57a09SHong Zhang for (i=0; i<mumps->id.lsol_loc; i++) { 973a5e57a09SHong Zhang mumps->id.isol_loc[i] -= 1; /* change Fortran style to C style */ 974a5e57a09SHong Zhang } 975a5e57a09SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,mumps->id.lsol_loc,mumps->id.isol_loc,PETSC_COPY_VALUES,&is_petsc);CHKERRQ(ierr); /* to */ 9769448b7f1SJunchao Zhang ierr = VecScatterCreate(mumps->x_seq,is_iden,x,is_petsc,&mumps->scat_sol);CHKERRQ(ierr); 9776bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 9786bf464f9SBarry Smith ierr = ISDestroy(&is_petsc);CHKERRQ(ierr); 9792205254eSKarl Rupp 980a5e57a09SHong Zhang mumps->ICNTL9_pre = mumps->id.ICNTL(9); /* save current value of id.ICNTL(9) */ 981397b6df1SKris Buschelman } 982a5e57a09SHong Zhang 983a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 984a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 985329ec9b3SHong Zhang } 986353d7d71SJunchao Zhang 987353d7d71SJunchao Zhang if (mumps->petsc_size > 1) {if (!mumps->myid) {ierr = VecRestoreArray(b_seq,&array);CHKERRQ(ierr);}} 988353d7d71SJunchao Zhang else {ierr = VecRestoreArray(x,&array);CHKERRQ(ierr);} 989353d7d71SJunchao Zhang 9909880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*mumps->id.RINFO(3));CHKERRQ(ierr); 991397b6df1SKris Buschelman PetscFunctionReturn(0); 992397b6df1SKris Buschelman } 993397b6df1SKris Buschelman 99451d5961aSHong Zhang PetscErrorCode MatSolveTranspose_MUMPS(Mat A,Vec b,Vec x) 99551d5961aSHong Zhang { 996e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 99751d5961aSHong Zhang PetscErrorCode ierr; 99851d5961aSHong Zhang 99951d5961aSHong Zhang PetscFunctionBegin; 1000a5e57a09SHong Zhang mumps->id.ICNTL(9) = 0; 10010ad0caddSJed Brown ierr = MatSolve_MUMPS(A,b,x);CHKERRQ(ierr); 1002a5e57a09SHong Zhang mumps->id.ICNTL(9) = 1; 100351d5961aSHong Zhang PetscFunctionReturn(0); 100451d5961aSHong Zhang } 100551d5961aSHong Zhang 1006e0b74bf9SHong Zhang PetscErrorCode MatMatSolve_MUMPS(Mat A,Mat B,Mat X) 1007e0b74bf9SHong Zhang { 1008bda8bf91SBarry Smith PetscErrorCode ierr; 1009b8491c3eSStefano Zampini Mat Bt = NULL; 1010b8491c3eSStefano Zampini PetscBool flg, flgT; 1011e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 1012334c5f61SHong Zhang PetscInt i,nrhs,M; 10131683a169SBarry Smith PetscScalar *array; 10141683a169SBarry Smith const PetscScalar *rbray; 10155b7de3c2SKarl Rupp PetscInt lsol_loc,nlsol_loc,*isol_loc,*idxx,*isol_loc_save,iidx = 0; 10161683a169SBarry Smith PetscScalar *bray,*sol_loc,*sol_loc_save; 1017be818407SHong Zhang IS is_to,is_from; 1018beae5ec0SHong Zhang PetscInt k,proc,j,m,myrstart; 1019be818407SHong Zhang const PetscInt *rstart; 1020beae5ec0SHong Zhang Vec v_mpi,b_seq,msol_loc; 1021be818407SHong Zhang VecScatter scat_rhs,scat_sol; 1022be818407SHong Zhang PetscScalar *aa; 1023be818407SHong Zhang PetscInt spnr,*ia,*ja; 1024d56c302dSHong Zhang Mat_MPIAIJ *b = NULL; 1025bda8bf91SBarry Smith 1026e0b74bf9SHong Zhang PetscFunctionBegin; 1027be818407SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)X,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 1028be818407SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_ARG_WRONG,"Matrix X must be MATDENSE matrix"); 1029be818407SHong Zhang 10300298fd71SBarry Smith ierr = PetscObjectTypeCompareAny((PetscObject)B,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 1031be818407SHong Zhang if (flg) { /* dense B */ 1032c0be3364SHong Zhang if (B->rmap->n != X->rmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Matrix B and X must have same row distribution"); 1033be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 10340e6b8875SHong Zhang } else { /* sparse B */ 1035f9fb9879SHong Zhang if (X == B) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_IDN,"X and B must be different matrices"); 1036be818407SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)B,MATTRANSPOSEMAT,&flgT);CHKERRQ(ierr); 10370e6b8875SHong Zhang if (flgT) { /* input B is transpose of actural RHS matrix, 10380e6b8875SHong Zhang because mumps requires sparse compressed COLUMN storage! See MatMatTransposeSolve_MUMPS() */ 1039be818407SHong Zhang ierr = MatTransposeGetMat(B,&Bt);CHKERRQ(ierr); 10400f52d626SJunchao Zhang } else SETERRQ(PetscObjectComm((PetscObject)B),PETSC_ERR_ARG_WRONG,"Matrix B must be MATTRANSPOSEMAT matrix"); 1041be818407SHong Zhang mumps->id.ICNTL(20)= 1; /* sparse RHS */ 1042b8491c3eSStefano Zampini } 104387b22cf4SHong Zhang 10449481e6e9SHong Zhang ierr = MatGetSize(B,&M,&nrhs);CHKERRQ(ierr); 10459481e6e9SHong Zhang mumps->id.nrhs = nrhs; 10469481e6e9SHong Zhang mumps->id.lrhs = M; 10472b691707SHong Zhang mumps->id.rhs = NULL; 10489481e6e9SHong Zhang 10492d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 1050b8491c3eSStefano Zampini PetscScalar *aa; 1051b8491c3eSStefano Zampini PetscInt spnr,*ia,*ja; 1052e94cce23SStefano Zampini PetscBool second_solve = PETSC_FALSE; 1053b8491c3eSStefano Zampini 10542cd7d884SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 1055b8491c3eSStefano Zampini mumps->id.rhs = (MumpsScalar*)array; 10562b691707SHong Zhang 10572b691707SHong Zhang if (!Bt) { /* dense B */ 10582b691707SHong Zhang /* copy B to X */ 10591683a169SBarry Smith ierr = MatDenseGetArrayRead(B,&rbray);CHKERRQ(ierr); 1060580bdb30SBarry Smith ierr = PetscArraycpy(array,rbray,M*nrhs);CHKERRQ(ierr); 10611683a169SBarry Smith ierr = MatDenseRestoreArrayRead(B,&rbray);CHKERRQ(ierr); 10622b691707SHong Zhang } else { /* sparse B */ 1063b8491c3eSStefano Zampini ierr = MatSeqAIJGetArray(Bt,&aa);CHKERRQ(ierr); 1064be818407SHong Zhang ierr = MatGetRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1065c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 10662b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 1067b8491c3eSStefano Zampini mumps->id.irhs_ptr = ia; 1068b8491c3eSStefano Zampini mumps->id.irhs_sparse = ja; 1069b8491c3eSStefano Zampini mumps->id.nz_rhs = ia[spnr] - 1; 1070b8491c3eSStefano Zampini mumps->id.rhs_sparse = (MumpsScalar*)aa; 1071b8491c3eSStefano Zampini } 1072e94cce23SStefano Zampini /* handle condensation step of Schur complement (if any) */ 1073583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 1074e94cce23SStefano Zampini second_solve = PETSC_TRUE; 1075b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 1076e94cce23SStefano Zampini } 10772cd7d884SHong Zhang /* solve phase */ 10782cd7d884SHong Zhang /*-------------*/ 10792cd7d884SHong Zhang mumps->id.job = JOB_SOLVE; 10803ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 10812cd7d884SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 1082b5fa320bSStefano Zampini 1083b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 1084e94cce23SStefano Zampini if (second_solve) { 1085b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 1086e94cce23SStefano Zampini } 10872b691707SHong Zhang if (Bt) { /* sparse B */ 1088b8491c3eSStefano Zampini ierr = MatSeqAIJRestoreArray(Bt,&aa);CHKERRQ(ierr); 1089be818407SHong Zhang ierr = MatRestoreRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1090c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 1091b8491c3eSStefano Zampini } 10922cd7d884SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 1093be818407SHong Zhang PetscFunctionReturn(0); 1094be818407SHong Zhang } 1095801fbe65SHong Zhang 1096be818407SHong Zhang /*--------- parallel case: MUMPS requires rhs B to be centralized on the host! --------*/ 10972d4298aeSJunchao Zhang if (mumps->petsc_size > 1 && mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 1098241dbb5eSStefano Zampini 1099beae5ec0SHong Zhang /* create msol_loc to hold mumps local solution */ 11001683a169SBarry Smith isol_loc_save = mumps->id.isol_loc; /* save it for MatSolve() */ 11011683a169SBarry Smith sol_loc_save = (PetscScalar*)mumps->id.sol_loc; 1102801fbe65SHong Zhang 1103a1dfcbd9SJunchao Zhang lsol_loc = mumps->id.lsol_loc; 110471aed81dSHong Zhang nlsol_loc = nrhs*lsol_loc; /* length of sol_loc */ 1105a1dfcbd9SJunchao Zhang ierr = PetscMalloc2(nlsol_loc,&sol_loc,lsol_loc,&isol_loc);CHKERRQ(ierr); 1106940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 1107801fbe65SHong Zhang mumps->id.isol_loc = isol_loc; 1108801fbe65SHong Zhang 1109beae5ec0SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,nlsol_loc,(PetscScalar*)sol_loc,&msol_loc);CHKERRQ(ierr); 11102cd7d884SHong Zhang 11112b691707SHong Zhang if (!Bt) { /* dense B */ 111280577c12SJunchao Zhang /* TODO: Because of non-contiguous indices, the created vecscatter scat_rhs is not done in MPI_Gather, resulting in 111380577c12SJunchao Zhang very inefficient communication. An optimization is to use VecScatterCreateToZero to gather B to rank 0. Then on rank 111480577c12SJunchao Zhang 0, re-arrange B into desired order, which is a local operation. 111580577c12SJunchao Zhang */ 111680577c12SJunchao Zhang 1117beae5ec0SHong Zhang /* scatter v_mpi to b_seq because MUMPS only supports centralized rhs */ 1118be818407SHong Zhang /* wrap dense rhs matrix B into a vector v_mpi */ 11192b691707SHong Zhang ierr = MatGetLocalSize(B,&m,NULL);CHKERRQ(ierr); 11202b691707SHong Zhang ierr = MatDenseGetArray(B,&bray);CHKERRQ(ierr); 11212b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)B),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 11222b691707SHong Zhang ierr = MatDenseRestoreArray(B,&bray);CHKERRQ(ierr); 11232b691707SHong Zhang 1124be818407SHong Zhang /* scatter v_mpi to b_seq in proc[0]. MUMPS requires rhs to be centralized on the host! */ 1125801fbe65SHong Zhang if (!mumps->myid) { 1126beae5ec0SHong Zhang PetscInt *idx; 1127beae5ec0SHong Zhang /* idx: maps from k-th index of v_mpi to (i,j)-th global entry of B */ 1128beae5ec0SHong Zhang ierr = PetscMalloc1(nrhs*M,&idx);CHKERRQ(ierr); 1129be818407SHong Zhang ierr = MatGetOwnershipRanges(B,&rstart);CHKERRQ(ierr); 1130be818407SHong Zhang k = 0; 11312d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 1132be818407SHong Zhang for (j=0; j<nrhs; j++){ 1133beae5ec0SHong Zhang for (i=rstart[proc]; i<rstart[proc+1]; i++) idx[k++] = j*M + i; 1134be818407SHong Zhang } 1135be818407SHong Zhang } 1136be818407SHong Zhang 1137334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,nrhs*M,&b_seq);CHKERRQ(ierr); 1138beae5ec0SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nrhs*M,idx,PETSC_OWN_POINTER,&is_to);CHKERRQ(ierr); 1139801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nrhs*M,0,1,&is_from);CHKERRQ(ierr); 1140801fbe65SHong Zhang } else { 1141334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&b_seq);CHKERRQ(ierr); 1142801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_to);CHKERRQ(ierr); 1143801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_from);CHKERRQ(ierr); 1144801fbe65SHong Zhang } 11459448b7f1SJunchao Zhang ierr = VecScatterCreate(v_mpi,is_from,b_seq,is_to,&scat_rhs);CHKERRQ(ierr); 1146334c5f61SHong Zhang ierr = VecScatterBegin(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1147801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1148801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1149334c5f61SHong Zhang ierr = VecScatterEnd(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1150801fbe65SHong Zhang 1151801fbe65SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 1152334c5f61SHong Zhang ierr = VecGetArray(b_seq,&bray);CHKERRQ(ierr); 1153940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)bray; 1154334c5f61SHong Zhang ierr = VecRestoreArray(b_seq,&bray);CHKERRQ(ierr); 1155801fbe65SHong Zhang } 1156801fbe65SHong Zhang 11572b691707SHong Zhang } else { /* sparse B */ 11582b691707SHong Zhang b = (Mat_MPIAIJ*)Bt->data; 11592b691707SHong Zhang 1160be818407SHong Zhang /* wrap dense X into a vector v_mpi */ 11612b691707SHong Zhang ierr = MatGetLocalSize(X,&m,NULL);CHKERRQ(ierr); 11622b691707SHong Zhang ierr = MatDenseGetArray(X,&bray);CHKERRQ(ierr); 11632b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)X),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 11642b691707SHong Zhang ierr = MatDenseRestoreArray(X,&bray);CHKERRQ(ierr); 11652b691707SHong Zhang 11662b691707SHong Zhang if (!mumps->myid) { 11672b691707SHong Zhang ierr = MatSeqAIJGetArray(b->A,&aa);CHKERRQ(ierr); 1168be818407SHong Zhang ierr = MatGetRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1169c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 11702b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 11712b691707SHong Zhang mumps->id.irhs_ptr = ia; 11722b691707SHong Zhang mumps->id.irhs_sparse = ja; 11732b691707SHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 11742b691707SHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 11752b691707SHong Zhang } else { 11762b691707SHong Zhang mumps->id.irhs_ptr = NULL; 11772b691707SHong Zhang mumps->id.irhs_sparse = NULL; 11782b691707SHong Zhang mumps->id.nz_rhs = 0; 11792b691707SHong Zhang mumps->id.rhs_sparse = NULL; 11802b691707SHong Zhang } 11812b691707SHong Zhang } 11822b691707SHong Zhang 1183801fbe65SHong Zhang /* solve phase */ 1184801fbe65SHong Zhang /*-------------*/ 1185801fbe65SHong Zhang mumps->id.job = JOB_SOLVE; 11863ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1187801fbe65SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 1188801fbe65SHong Zhang 1189334c5f61SHong Zhang /* scatter mumps distributed solution to petsc vector v_mpi, which shares local arrays with solution matrix X */ 119074f0fcc7SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 119174f0fcc7SHong Zhang ierr = VecPlaceArray(v_mpi,array);CHKERRQ(ierr); 1192801fbe65SHong Zhang 1193334c5f61SHong Zhang /* create scatter scat_sol */ 1194be818407SHong Zhang ierr = MatGetOwnershipRanges(X,&rstart);CHKERRQ(ierr); 1195beae5ec0SHong Zhang /* iidx: index for scatter mumps solution to petsc X */ 1196beae5ec0SHong Zhang 1197beae5ec0SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nlsol_loc,0,1,&is_from);CHKERRQ(ierr); 1198beae5ec0SHong Zhang ierr = PetscMalloc1(nlsol_loc,&idxx);CHKERRQ(ierr); 1199beae5ec0SHong Zhang for (i=0; i<lsol_loc; i++) { 1200beae5ec0SHong Zhang isol_loc[i] -= 1; /* change Fortran style to C style. isol_loc[i+j*lsol_loc] contains x[isol_loc[i]] in j-th vector */ 1201beae5ec0SHong Zhang 12022d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 1203beae5ec0SHong Zhang if (isol_loc[i] >= rstart[proc] && isol_loc[i] < rstart[proc+1]) { 1204beae5ec0SHong Zhang myrstart = rstart[proc]; 1205beae5ec0SHong Zhang k = isol_loc[i] - myrstart; /* local index on 1st column of petsc vector X */ 1206beae5ec0SHong Zhang iidx = k + myrstart*nrhs; /* maps mumps isol_loc[i] to petsc index in X */ 1207beae5ec0SHong Zhang m = rstart[proc+1] - rstart[proc]; /* rows of X for this proc */ 1208beae5ec0SHong Zhang break; 1209be818407SHong Zhang } 1210be818407SHong Zhang } 1211be818407SHong Zhang 1212beae5ec0SHong Zhang for (j=0; j<nrhs; j++) idxx[i+j*lsol_loc] = iidx + j*m; 1213801fbe65SHong Zhang } 1214be818407SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nlsol_loc,idxx,PETSC_COPY_VALUES,&is_to);CHKERRQ(ierr); 1215beae5ec0SHong Zhang ierr = VecScatterCreate(msol_loc,is_from,v_mpi,is_to,&scat_sol);CHKERRQ(ierr); 1216beae5ec0SHong Zhang ierr = VecScatterBegin(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1217801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1218801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1219beae5ec0SHong Zhang ierr = VecScatterEnd(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1220801fbe65SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 122171aed81dSHong Zhang 122271aed81dSHong Zhang /* free spaces */ 12231683a169SBarry Smith mumps->id.sol_loc = (MumpsScalar*)sol_loc_save; 122471aed81dSHong Zhang mumps->id.isol_loc = isol_loc_save; 122571aed81dSHong Zhang 122671aed81dSHong Zhang ierr = PetscFree2(sol_loc,isol_loc);CHKERRQ(ierr); 1227801fbe65SHong Zhang ierr = PetscFree(idxx);CHKERRQ(ierr); 1228beae5ec0SHong Zhang ierr = VecDestroy(&msol_loc);CHKERRQ(ierr); 122974f0fcc7SHong Zhang ierr = VecDestroy(&v_mpi);CHKERRQ(ierr); 12302b691707SHong Zhang if (Bt) { 12312b691707SHong Zhang if (!mumps->myid) { 1232d56c302dSHong Zhang b = (Mat_MPIAIJ*)Bt->data; 12332b691707SHong Zhang ierr = MatSeqAIJRestoreArray(b->A,&aa);CHKERRQ(ierr); 1234be818407SHong Zhang ierr = MatRestoreRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1235c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 12362b691707SHong Zhang } 12372b691707SHong Zhang } else { 1238334c5f61SHong Zhang ierr = VecDestroy(&b_seq);CHKERRQ(ierr); 1239334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_rhs);CHKERRQ(ierr); 12402b691707SHong Zhang } 1241334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_sol);CHKERRQ(ierr); 12429880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*nrhs*mumps->id.RINFO(3));CHKERRQ(ierr); 1243e0b74bf9SHong Zhang PetscFunctionReturn(0); 1244e0b74bf9SHong Zhang } 1245e0b74bf9SHong Zhang 1246eb3ef3b2SHong Zhang PetscErrorCode MatMatTransposeSolve_MUMPS(Mat A,Mat Bt,Mat X) 1247eb3ef3b2SHong Zhang { 1248eb3ef3b2SHong Zhang PetscErrorCode ierr; 1249eb3ef3b2SHong Zhang PetscBool flg; 1250eb3ef3b2SHong Zhang Mat B; 1251eb3ef3b2SHong Zhang 1252eb3ef3b2SHong Zhang PetscFunctionBegin; 1253eb3ef3b2SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)Bt,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 1254eb3ef3b2SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)Bt),PETSC_ERR_ARG_WRONG,"Matrix Bt must be MATAIJ matrix"); 1255eb3ef3b2SHong Zhang 1256eb3ef3b2SHong Zhang /* Create B=Bt^T that uses Bt's data structure */ 1257eb3ef3b2SHong Zhang ierr = MatCreateTranspose(Bt,&B);CHKERRQ(ierr); 1258eb3ef3b2SHong Zhang 12590e6b8875SHong Zhang ierr = MatMatSolve_MUMPS(A,B,X);CHKERRQ(ierr); 1260eb3ef3b2SHong Zhang ierr = MatDestroy(&B);CHKERRQ(ierr); 1261eb3ef3b2SHong Zhang PetscFunctionReturn(0); 1262eb3ef3b2SHong Zhang } 1263eb3ef3b2SHong Zhang 1264ace3df97SHong Zhang #if !defined(PETSC_USE_COMPLEX) 1265a58c3f20SHong Zhang /* 1266a58c3f20SHong Zhang input: 1267a58c3f20SHong Zhang F: numeric factor 1268a58c3f20SHong Zhang output: 1269a58c3f20SHong Zhang nneg: total number of negative pivots 127019d49a3bSHong Zhang nzero: total number of zero pivots 127119d49a3bSHong Zhang npos: (global dimension of F) - nneg - nzero 1272a58c3f20SHong Zhang */ 1273dfbe8321SBarry Smith PetscErrorCode MatGetInertia_SBAIJMUMPS(Mat F,int *nneg,int *nzero,int *npos) 1274a58c3f20SHong Zhang { 1275e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1276dfbe8321SBarry Smith PetscErrorCode ierr; 1277c1490034SHong Zhang PetscMPIInt size; 1278a58c3f20SHong Zhang 1279a58c3f20SHong Zhang PetscFunctionBegin; 1280ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)F),&size);CHKERRQ(ierr); 1281bcb30aebSHong Zhang /* MUMPS 4.3.1 calls ScaLAPACK when ICNTL(13)=0 (default), which does not offer the possibility to compute the inertia of a dense matrix. Set ICNTL(13)=1 to skip ScaLAPACK */ 1282a5e57a09SHong Zhang if (size > 1 && mumps->id.ICNTL(13) != 1) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"ICNTL(13)=%d. -mat_mumps_icntl_13 must be set as 1 for correct global matrix inertia\n",mumps->id.INFOG(13)); 1283ed85ac9fSHong Zhang 1284710ac8efSHong Zhang if (nneg) *nneg = mumps->id.INFOG(12); 1285ed85ac9fSHong Zhang if (nzero || npos) { 1286ed85ac9fSHong Zhang if (mumps->id.ICNTL(24) != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"-mat_mumps_icntl_24 must be set as 1 for null pivot row detection"); 1287710ac8efSHong Zhang if (nzero) *nzero = mumps->id.INFOG(28); 1288710ac8efSHong Zhang if (npos) *npos = F->rmap->N - (mumps->id.INFOG(12) + mumps->id.INFOG(28)); 1289a58c3f20SHong Zhang } 1290a58c3f20SHong Zhang PetscFunctionReturn(0); 1291a58c3f20SHong Zhang } 129219d49a3bSHong Zhang #endif 1293a58c3f20SHong Zhang 12943ab56b82SJunchao Zhang PetscErrorCode MatMumpsGatherNonzerosOnMaster(MatReuse reuse,Mat_MUMPS *mumps) 12953ab56b82SJunchao Zhang { 12963ab56b82SJunchao Zhang PetscErrorCode ierr; 12976ac9f4daSSatish Balay PetscInt i,nz=0,*irn,*jcn=0; 12986ac9f4daSSatish Balay PetscScalar *val=0; 12993ab56b82SJunchao Zhang PetscMPIInt mpinz,*recvcount=NULL,*displs=NULL; 13003ab56b82SJunchao Zhang 13013ab56b82SJunchao Zhang PetscFunctionBegin; 13023ab56b82SJunchao Zhang if (mumps->omp_comm_size > 1) { 13033ab56b82SJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { 13043ab56b82SJunchao Zhang /* master first gathers counts of nonzeros to receive */ 13053ab56b82SJunchao Zhang if (mumps->is_omp_master) { ierr = PetscMalloc2(mumps->omp_comm_size,&recvcount,mumps->omp_comm_size,&displs);CHKERRQ(ierr); } 13063ab56b82SJunchao Zhang ierr = PetscMPIIntCast(mumps->nz,&mpinz);CHKERRQ(ierr); 13073ab56b82SJunchao Zhang ierr = MPI_Gather(&mpinz,1,MPI_INT,recvcount,1,MPI_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 13083ab56b82SJunchao Zhang 13093ab56b82SJunchao Zhang /* master allocates memory to receive nonzeros */ 13103ab56b82SJunchao Zhang if (mumps->is_omp_master) { 13113ab56b82SJunchao Zhang displs[0] = 0; 13123ab56b82SJunchao Zhang for (i=1; i<mumps->omp_comm_size; i++) displs[i] = displs[i-1] + recvcount[i-1]; 13133ab56b82SJunchao Zhang nz = displs[mumps->omp_comm_size-1] + recvcount[mumps->omp_comm_size-1]; 13143ab56b82SJunchao Zhang ierr = PetscMalloc(2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar),&irn);CHKERRQ(ierr); 13153ab56b82SJunchao Zhang jcn = irn + nz; 13163ab56b82SJunchao Zhang val = (PetscScalar*)(jcn + nz); 13173ab56b82SJunchao Zhang } 13183ab56b82SJunchao Zhang 13193ab56b82SJunchao Zhang /* save the gatherv plan */ 13203ab56b82SJunchao Zhang mumps->mpinz = mpinz; /* used as send count */ 13213ab56b82SJunchao Zhang mumps->recvcount = recvcount; 13223ab56b82SJunchao Zhang mumps->displs = displs; 13233ab56b82SJunchao Zhang 13243ab56b82SJunchao Zhang /* master gathers nonzeros */ 13253ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->irn,mpinz,MPIU_INT,irn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 13263ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->jcn,mpinz,MPIU_INT,jcn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 13273ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->val,mpinz,MPIU_SCALAR,val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 13283ab56b82SJunchao Zhang 13293ab56b82SJunchao Zhang /* master frees its row/col/val and replaces them with bigger arrays */ 13303ab56b82SJunchao Zhang if (mumps->is_omp_master) { 13313ab56b82SJunchao Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); /* irn/jcn/val are allocated together so free only irn */ 13323ab56b82SJunchao Zhang mumps->nz = nz; /* it is a sum of mpinz over omp_comm */ 13333ab56b82SJunchao Zhang mumps->irn = irn; 13343ab56b82SJunchao Zhang mumps->jcn = jcn; 13353ab56b82SJunchao Zhang mumps->val = val; 13363ab56b82SJunchao Zhang } 13373ab56b82SJunchao Zhang } else { 13383ab56b82SJunchao Zhang ierr = MPI_Gatherv((mumps->is_omp_master?MPI_IN_PLACE:mumps->val),mumps->mpinz,MPIU_SCALAR,mumps->val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 13393ab56b82SJunchao Zhang } 13403ab56b82SJunchao Zhang } 13413ab56b82SJunchao Zhang PetscFunctionReturn(0); 13423ab56b82SJunchao Zhang } 13433ab56b82SJunchao Zhang 13440481f469SBarry Smith PetscErrorCode MatFactorNumeric_MUMPS(Mat F,Mat A,const MatFactorInfo *info) 1345af281ebdSHong Zhang { 1346e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)(F)->data; 13476849ba73SBarry Smith PetscErrorCode ierr; 1348ace3abfcSBarry Smith PetscBool isMPIAIJ; 1349397b6df1SKris Buschelman 1350397b6df1SKris Buschelman PetscFunctionBegin; 13516baea169SHong Zhang if (mumps->id.INFOG(1) < 0) { 13522aca8efcSHong Zhang if (mumps->id.INFOG(1) == -6) { 13532aca8efcSHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called with singular matrix structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 13546baea169SHong Zhang } 13556baea169SHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called after analysis phase fails, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 13562aca8efcSHong Zhang PetscFunctionReturn(0); 13572aca8efcSHong Zhang } 13586baea169SHong Zhang 1359a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_REUSE_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 13603ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_REUSE_MATRIX,mumps);CHKERRQ(ierr); 1361397b6df1SKris Buschelman 1362397b6df1SKris Buschelman /* numerical factorization phase */ 1363329ec9b3SHong Zhang /*-------------------------------*/ 1364a5e57a09SHong Zhang mumps->id.job = JOB_FACTNUMERIC; 13654e34a73bSHong Zhang if (!mumps->id.ICNTL(18)) { /* A is centralized */ 1366a5e57a09SHong Zhang if (!mumps->myid) { 1367940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 1368397b6df1SKris Buschelman } 1369397b6df1SKris Buschelman } else { 1370940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 1371397b6df1SKris Buschelman } 13723ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1373a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) { 1374c0d63f2fSHong Zhang if (A->erroriffailure) { 1375c0d63f2fSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 1376151787a6SHong Zhang } else { 1377c0d63f2fSHong Zhang if (mumps->id.INFOG(1) == -10) { /* numerically singular matrix */ 13782aca8efcSHong Zhang ierr = PetscInfo2(F,"matrix is numerically singular, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1379603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 1380c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -13) { 1381c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, cannot allocate required memory %d megabytes\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1382603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 1383c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -8 || mumps->id.INFOG(1) == -9 || (-16 < mumps->id.INFOG(1) && mumps->id.INFOG(1) < -10) ) { 1384c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d, problem with workarray \n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1385603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 13862aca8efcSHong Zhang } else { 1387c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1388603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 1389151787a6SHong Zhang } 13902aca8efcSHong Zhang } 1391397b6df1SKris Buschelman } 1392a5e57a09SHong Zhang if (!mumps->myid && mumps->id.ICNTL(16) > 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB," mumps->id.ICNTL(16):=%d\n",mumps->id.INFOG(16)); 1393397b6df1SKris Buschelman 1394b3cb21ddSStefano Zampini F->assembled = PETSC_TRUE; 1395a5e57a09SHong Zhang mumps->matstruc = SAME_NONZERO_PATTERN; 1396b3cb21ddSStefano Zampini if (F->schur) { /* reset Schur status to unfactored */ 13973cb7dd0eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 1398c70f7ee4SJunchao Zhang F->schur->offloadmask = PETSC_OFFLOAD_CPU; 13993cb7dd0eSStefano Zampini #endif 1400b3cb21ddSStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 1401b3cb21ddSStefano Zampini mumps->id.ICNTL(19) = 2; 1402b3cb21ddSStefano Zampini ierr = MatTranspose(F->schur,MAT_INPLACE_MATRIX,&F->schur);CHKERRQ(ierr); 1403b3cb21ddSStefano Zampini } 1404b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,NULL,MAT_FACTOR_SCHUR_UNFACTORED);CHKERRQ(ierr); 1405b3cb21ddSStefano Zampini } 140667877ebaSShri Abhyankar 1407066565c5SStefano Zampini /* just to be sure that ICNTL(19) value returned by a call from MatMumpsGetIcntl is always consistent */ 1408066565c5SStefano Zampini if (!mumps->sym && mumps->id.ICNTL(19) && mumps->id.ICNTL(19) != 1) mumps->id.ICNTL(19) = 3; 1409066565c5SStefano Zampini 14103ab56b82SJunchao Zhang if (!mumps->is_omp_master) mumps->id.INFO(23) = 0; 14112d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 141267877ebaSShri Abhyankar PetscInt lsol_loc; 141367877ebaSShri Abhyankar PetscScalar *sol_loc; 14142205254eSKarl Rupp 1415c2093ab7SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&isMPIAIJ);CHKERRQ(ierr); 1416c2093ab7SHong Zhang 1417c2093ab7SHong Zhang /* distributed solution; Create x_seq=sol_loc for repeated use */ 1418c2093ab7SHong Zhang if (mumps->x_seq) { 1419c2093ab7SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 1420c2093ab7SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 1421c2093ab7SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 1422c2093ab7SHong Zhang } 1423a5e57a09SHong Zhang lsol_loc = mumps->id.INFO(23); /* length of sol_loc */ 1424dcca6d9dSJed Brown ierr = PetscMalloc2(lsol_loc,&sol_loc,lsol_loc,&mumps->id.isol_loc);CHKERRQ(ierr); 1425a5e57a09SHong Zhang mumps->id.lsol_loc = lsol_loc; 1426940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 1427a5e57a09SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,lsol_loc,sol_loc,&mumps->x_seq);CHKERRQ(ierr); 142867877ebaSShri Abhyankar } 14299880c9b4SStefano Zampini ierr = PetscLogFlops(mumps->id.RINFO(2));CHKERRQ(ierr); 1430397b6df1SKris Buschelman PetscFunctionReturn(0); 1431397b6df1SKris Buschelman } 1432397b6df1SKris Buschelman 14339a2535b5SHong Zhang /* Sets MUMPS options from the options database */ 14349a2535b5SHong Zhang PetscErrorCode PetscSetMUMPSFromOptions(Mat F, Mat A) 1435dcd589f8SShri Abhyankar { 1436e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1437dcd589f8SShri Abhyankar PetscErrorCode ierr; 1438a0e18203SThibaut Appel PetscInt icntl,info[80],i,ninfo=80; 1439ace3abfcSBarry Smith PetscBool flg; 1440dcd589f8SShri Abhyankar 1441dcd589f8SShri Abhyankar PetscFunctionBegin; 1442ce94432eSBarry Smith ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MUMPS Options","Mat");CHKERRQ(ierr); 14439a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_1","ICNTL(1): output stream for error messages","None",mumps->id.ICNTL(1),&icntl,&flg);CHKERRQ(ierr); 14449a2535b5SHong Zhang if (flg) mumps->id.ICNTL(1) = icntl; 14459a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_2","ICNTL(2): output stream for diagnostic printing, statistics, and warning","None",mumps->id.ICNTL(2),&icntl,&flg);CHKERRQ(ierr); 14469a2535b5SHong Zhang if (flg) mumps->id.ICNTL(2) = icntl; 14479a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_3","ICNTL(3): output stream for global information, collected on the host","None",mumps->id.ICNTL(3),&icntl,&flg);CHKERRQ(ierr); 14489a2535b5SHong Zhang if (flg) mumps->id.ICNTL(3) = icntl; 1449dcd589f8SShri Abhyankar 14509a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_4","ICNTL(4): level of printing (0 to 4)","None",mumps->id.ICNTL(4),&icntl,&flg);CHKERRQ(ierr); 14519a2535b5SHong Zhang if (flg) mumps->id.ICNTL(4) = icntl; 14529a2535b5SHong Zhang if (mumps->id.ICNTL(4) || PetscLogPrintInfo) mumps->id.ICNTL(3) = 6; /* resume MUMPS default id.ICNTL(3) = 6 */ 14539a2535b5SHong Zhang 1454d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_6","ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7)","None",mumps->id.ICNTL(6),&icntl,&flg);CHKERRQ(ierr); 14559a2535b5SHong Zhang if (flg) mumps->id.ICNTL(6) = icntl; 14569a2535b5SHong Zhang 1457d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_7","ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis","None",mumps->id.ICNTL(7),&icntl,&flg);CHKERRQ(ierr); 1458dcd589f8SShri Abhyankar if (flg) { 14592d4298aeSJunchao Zhang if (icntl== 1 && mumps->petsc_size > 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"pivot order be set by the user in PERM_IN -- not supported by the PETSc/MUMPS interface\n"); 14602205254eSKarl Rupp else mumps->id.ICNTL(7) = icntl; 1461dcd589f8SShri Abhyankar } 1462e0b74bf9SHong Zhang 14630298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_8","ICNTL(8): scaling strategy (-2 to 8 or 77)","None",mumps->id.ICNTL(8),&mumps->id.ICNTL(8),NULL);CHKERRQ(ierr); 1464d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_9","ICNTL(9): computes the solution using A or A^T","None",mumps->id.ICNTL(9),&mumps->id.ICNTL(9),NULL);CHKERRQ(ierr); handled by MatSolveTranspose_MUMPS() */ 14650298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_10","ICNTL(10): max num of refinements","None",mumps->id.ICNTL(10),&mumps->id.ICNTL(10),NULL);CHKERRQ(ierr); 1466d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_11","ICNTL(11): statistics related to an error analysis (via -ksp_view)","None",mumps->id.ICNTL(11),&mumps->id.ICNTL(11),NULL);CHKERRQ(ierr); 1467d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_12","ICNTL(12): an ordering strategy for symmetric matrices (0 to 3)","None",mumps->id.ICNTL(12),&mumps->id.ICNTL(12),NULL);CHKERRQ(ierr); 1468d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_13","ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting","None",mumps->id.ICNTL(13),&mumps->id.ICNTL(13),NULL);CHKERRQ(ierr); 1469d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_14","ICNTL(14): percentage increase in the estimated working space","None",mumps->id.ICNTL(14),&mumps->id.ICNTL(14),NULL);CHKERRQ(ierr); 1470d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_19","ICNTL(19): computes the Schur complement","None",mumps->id.ICNTL(19),&mumps->id.ICNTL(19),NULL);CHKERRQ(ierr); 147159ac8732SStefano Zampini if (mumps->id.ICNTL(19) <= 0 || mumps->id.ICNTL(19) > 3) { /* reset any schur data (if any) */ 1472b3cb21ddSStefano Zampini ierr = MatDestroy(&F->schur);CHKERRQ(ierr); 147359ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 147459ac8732SStefano Zampini } 14754e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_20","ICNTL(20): the format (dense or sparse) of the right-hand sides","None",mumps->id.ICNTL(20),&mumps->id.ICNTL(20),NULL);CHKERRQ(ierr); -- sparse rhs is not supported in PETSc API */ 1476d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_21","ICNTL(21): the distribution (centralized or distributed) of the solution vectors","None",mumps->id.ICNTL(21),&mumps->id.ICNTL(21),NULL);CHKERRQ(ierr); we only use distributed solution vector */ 14779a2535b5SHong Zhang 1478d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_22","ICNTL(22): in-core/out-of-core factorization and solve (0 or 1)","None",mumps->id.ICNTL(22),&mumps->id.ICNTL(22),NULL);CHKERRQ(ierr); 14790298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_23","ICNTL(23): max size of the working memory (MB) that can allocate per processor","None",mumps->id.ICNTL(23),&mumps->id.ICNTL(23),NULL);CHKERRQ(ierr); 14800298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_24","ICNTL(24): detection of null pivot rows (0 or 1)","None",mumps->id.ICNTL(24),&mumps->id.ICNTL(24),NULL);CHKERRQ(ierr); 14819a2535b5SHong Zhang if (mumps->id.ICNTL(24)) { 14829a2535b5SHong Zhang mumps->id.ICNTL(13) = 1; /* turn-off ScaLAPACK to help with the correct detection of null pivots */ 1483d7ebd59bSHong Zhang } 1484d7ebd59bSHong Zhang 1485b4ed93dbSHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_25","ICNTL(25): computes a solution of a deficient matrix and a null space basis","None",mumps->id.ICNTL(25),&mumps->id.ICNTL(25),NULL);CHKERRQ(ierr); 1486d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_26","ICNTL(26): drives the solution phase if a Schur complement matrix","None",mumps->id.ICNTL(26),&mumps->id.ICNTL(26),NULL);CHKERRQ(ierr); 14872cd7d884SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_27","ICNTL(27): the blocking size for multiple right-hand sides","None",mumps->id.ICNTL(27),&mumps->id.ICNTL(27),NULL);CHKERRQ(ierr); 14880298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_28","ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering","None",mumps->id.ICNTL(28),&mumps->id.ICNTL(28),NULL);CHKERRQ(ierr); 1489d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_29","ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis","None",mumps->id.ICNTL(29),&mumps->id.ICNTL(29),NULL);CHKERRQ(ierr); 149089a9c03aSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_30","ICNTL(30): compute user-specified set of entries in inv(A)","None",mumps->id.ICNTL(30),&mumps->id.ICNTL(30),NULL);CHKERRQ(ierr); */ /* call MatMumpsGetInverse() directly */ 1491d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_31","ICNTL(31): indicates which factors may be discarded during factorization","None",mumps->id.ICNTL(31),&mumps->id.ICNTL(31),NULL);CHKERRQ(ierr); 14924e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_32","ICNTL(32): performs the forward elemination of the right-hand sides during factorization","None",mumps->id.ICNTL(32),&mumps->id.ICNTL(32),NULL);CHKERRQ(ierr); -- not supported by PETSc API */ 14930298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_33","ICNTL(33): compute determinant","None",mumps->id.ICNTL(33),&mumps->id.ICNTL(33),NULL);CHKERRQ(ierr); 1494a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_35","ICNTL(35): activates Block Low Rank (BLR) based factorization","None",mumps->id.ICNTL(35),&mumps->id.ICNTL(35),NULL);CHKERRQ(ierr); 1495a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_36","ICNTL(36): choice of BLR factorization variant","None",mumps->id.ICNTL(36),&mumps->id.ICNTL(36),NULL);CHKERRQ(ierr); 1496a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_38","ICNTL(38): estimated compression rate of LU factors with BLR","None",mumps->id.ICNTL(38),&mumps->id.ICNTL(38),NULL);CHKERRQ(ierr); 1497dcd589f8SShri Abhyankar 14980298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr); 14990298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr); 15000298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr); 15010298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr); 15020298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_5","CNTL(5): fixation for null pivots","None",mumps->id.CNTL(5),&mumps->id.CNTL(5),NULL);CHKERRQ(ierr); 1503b4ed93dbSHong Zhang ierr = PetscOptionsReal("-mat_mumps_cntl_7","CNTL(7): dropping parameter used during BLR","None",mumps->id.CNTL(7),&mumps->id.CNTL(7),NULL);CHKERRQ(ierr); 1504e5bb22a1SHong Zhang 15052a808120SBarry Smith ierr = PetscOptionsString("-mat_mumps_ooc_tmpdir", "out of core directory", "None", mumps->id.ooc_tmpdir, mumps->id.ooc_tmpdir, 256, NULL);CHKERRQ(ierr); 1506b34f08ffSHong Zhang 150716d797efSHong Zhang ierr = PetscOptionsIntArray("-mat_mumps_view_info","request INFO local to each processor","",info,&ninfo,NULL);CHKERRQ(ierr); 1508b34f08ffSHong Zhang if (ninfo) { 1509a0e18203SThibaut Appel if (ninfo > 80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"number of INFO %d must <= 80\n",ninfo); 1510b34f08ffSHong Zhang ierr = PetscMalloc1(ninfo,&mumps->info);CHKERRQ(ierr); 1511b34f08ffSHong Zhang mumps->ninfo = ninfo; 1512b34f08ffSHong Zhang for (i=0; i<ninfo; i++) { 1513a0e18203SThibaut Appel if (info[i] < 0 || info[i]>80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"index of INFO %d must between 1 and 80\n",ninfo); 15142a808120SBarry Smith else mumps->info[i] = info[i]; 1515b34f08ffSHong Zhang } 1516b34f08ffSHong Zhang } 1517b34f08ffSHong Zhang 15182a808120SBarry Smith ierr = PetscOptionsEnd();CHKERRQ(ierr); 1519dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1520dcd589f8SShri Abhyankar } 1521dcd589f8SShri Abhyankar 1522f697e70eSHong Zhang PetscErrorCode PetscInitializeMUMPS(Mat A,Mat_MUMPS *mumps) 1523dcd589f8SShri Abhyankar { 1524dcd589f8SShri Abhyankar PetscErrorCode ierr; 15257c405c4aSJunchao Zhang PetscInt nthreads=0; 1526dcd589f8SShri Abhyankar 1527dcd589f8SShri Abhyankar PetscFunctionBegin; 15283ab56b82SJunchao Zhang mumps->petsc_comm = PetscObjectComm((PetscObject)A); 15293ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->petsc_comm,&mumps->petsc_size);CHKERRQ(ierr); 15303ab56b82SJunchao Zhang ierr = MPI_Comm_rank(mumps->petsc_comm,&mumps->myid);CHKERRQ(ierr); /* so that code like "if (!myid)" still works even if mumps_comm is different */ 15313ab56b82SJunchao Zhang 15327c405c4aSJunchao Zhang ierr = PetscOptionsHasName(NULL,NULL,"-mat_mumps_use_omp_threads",&mumps->use_petsc_omp_support);CHKERRQ(ierr); 15337c405c4aSJunchao Zhang if (mumps->use_petsc_omp_support) nthreads = -1; /* -1 will let PetscOmpCtrlCreate() guess a proper value when user did not supply one */ 15347c405c4aSJunchao Zhang ierr = PetscOptionsGetInt(NULL,NULL,"-mat_mumps_use_omp_threads",&nthreads,NULL);CHKERRQ(ierr); 15353ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { 15363ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 15373ab56b82SJunchao Zhang ierr = PetscOmpCtrlCreate(mumps->petsc_comm,nthreads,&mumps->omp_ctrl);CHKERRQ(ierr); 15383ab56b82SJunchao Zhang ierr = PetscOmpCtrlGetOmpComms(mumps->omp_ctrl,&mumps->omp_comm,&mumps->mumps_comm,&mumps->is_omp_master);CHKERRQ(ierr); 15393ab56b82SJunchao Zhang #else 1540217d3b1eSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP_SYS,"the system does not have PETSc OpenMP support but you added the -mat_mumps_use_omp_threads option. Configure PETSc with --with-openmp --download-hwloc (or --with-hwloc) to enable it, see more in MATSOLVERMUMPS manual\n"); 15413ab56b82SJunchao Zhang #endif 15423ab56b82SJunchao Zhang } else { 15433ab56b82SJunchao Zhang mumps->omp_comm = PETSC_COMM_SELF; 15443ab56b82SJunchao Zhang mumps->mumps_comm = mumps->petsc_comm; 15453ab56b82SJunchao Zhang mumps->is_omp_master = PETSC_TRUE; 15463ab56b82SJunchao Zhang } 15473ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->omp_comm,&mumps->omp_comm_size);CHKERRQ(ierr); 15482205254eSKarl Rupp 15492d4298aeSJunchao Zhang mumps->id.comm_fortran = MPI_Comm_c2f(mumps->mumps_comm); 1550f697e70eSHong Zhang mumps->id.job = JOB_INIT; 1551f697e70eSHong Zhang mumps->id.par = 1; /* host participates factorizaton and solve */ 1552f697e70eSHong Zhang mumps->id.sym = mumps->sym; 15533ab56b82SJunchao Zhang 15543ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 15556c62bb2dSHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in PetscInitializeMUMPS: INFOG(1)=%d\n",mumps->id.INFOG(1)); 15563ab56b82SJunchao Zhang 15573ab56b82SJunchao Zhang /* copy MUMPS default control values from master to slaves. Although slaves do not call MUMPS, they may access these values in code. 15583ab56b82SJunchao Zhang For example, ICNTL(9) is initialized to 1 by MUMPS and slaves check ICNTL(9) in MatSolve_MUMPS. 15593ab56b82SJunchao Zhang */ 1560c3714a1dSJunchao Zhang ierr = MPI_Bcast(mumps->id.icntl,40,MPI_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 Manual Section 9 */ 15613ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.cntl, 15,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 1562f697e70eSHong Zhang 15630298fd71SBarry Smith mumps->scat_rhs = NULL; 15640298fd71SBarry Smith mumps->scat_sol = NULL; 15659a2535b5SHong Zhang 156670544d5fSHong Zhang /* set PETSc-MUMPS default options - override MUMPS default */ 15679a2535b5SHong Zhang mumps->id.ICNTL(3) = 0; 15689a2535b5SHong Zhang mumps->id.ICNTL(4) = 0; 15692d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 15709a2535b5SHong Zhang mumps->id.ICNTL(18) = 0; /* centralized assembled matrix input */ 15719a2535b5SHong Zhang } else { 15729a2535b5SHong Zhang mumps->id.ICNTL(18) = 3; /* distributed assembled matrix input */ 15734e34a73bSHong Zhang mumps->id.ICNTL(20) = 0; /* rhs is in dense format */ 157470544d5fSHong Zhang mumps->id.ICNTL(21) = 1; /* distributed solution */ 15759a2535b5SHong Zhang } 15766444a565SStefano Zampini 15776444a565SStefano Zampini /* schur */ 15786444a565SStefano Zampini mumps->id.size_schur = 0; 15796444a565SStefano Zampini mumps->id.listvar_schur = NULL; 15806444a565SStefano Zampini mumps->id.schur = NULL; 1581b5fa320bSStefano Zampini mumps->sizeredrhs = 0; 158259ac8732SStefano Zampini mumps->schur_sol = NULL; 158359ac8732SStefano Zampini mumps->schur_sizesol = 0; 1584dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1585dcd589f8SShri Abhyankar } 1586dcd589f8SShri Abhyankar 15879a625307SHong Zhang PetscErrorCode MatFactorSymbolic_MUMPS_ReportIfError(Mat F,Mat A,const MatFactorInfo *info,Mat_MUMPS *mumps) 15885cd7cf9dSHong Zhang { 15895cd7cf9dSHong Zhang PetscErrorCode ierr; 15905cd7cf9dSHong Zhang 15915cd7cf9dSHong Zhang PetscFunctionBegin; 15925cd7cf9dSHong Zhang if (mumps->id.INFOG(1) < 0) { 15935cd7cf9dSHong Zhang if (A->erroriffailure) { 15945cd7cf9dSHong Zhang SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in analysis phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 15955cd7cf9dSHong Zhang } else { 15965cd7cf9dSHong Zhang if (mumps->id.INFOG(1) == -6) { 15975cd7cf9dSHong Zhang ierr = PetscInfo2(F,"matrix is singular in structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1598603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_STRUCT_ZEROPIVOT; 15995cd7cf9dSHong Zhang } else if (mumps->id.INFOG(1) == -5 || mumps->id.INFOG(1) == -7) { 16005cd7cf9dSHong Zhang ierr = PetscInfo2(F,"problem of workspace, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1601603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 16025cd7cf9dSHong Zhang } else { 16035cd7cf9dSHong Zhang ierr = PetscInfo2(F,"Error reported by MUMPS in analysis phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1604603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 16055cd7cf9dSHong Zhang } 16065cd7cf9dSHong Zhang } 16075cd7cf9dSHong Zhang } 16085cd7cf9dSHong Zhang PetscFunctionReturn(0); 16095cd7cf9dSHong Zhang } 16105cd7cf9dSHong Zhang 1611a5e57a09SHong Zhang /* Note Petsc r(=c) permutation is used when mumps->id.ICNTL(7)==1 with centralized assembled matrix input; otherwise r and c are ignored */ 16120481f469SBarry Smith PetscErrorCode MatLUFactorSymbolic_AIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1613b24902e0SBarry Smith { 1614e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1615dcd589f8SShri Abhyankar PetscErrorCode ierr; 161667877ebaSShri Abhyankar Vec b; 161767877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1618397b6df1SKris Buschelman 1619397b6df1SKris Buschelman PetscFunctionBegin; 1620a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1621dcd589f8SShri Abhyankar 16229a2535b5SHong Zhang /* Set MUMPS options from the options database */ 16239a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1624dcd589f8SShri Abhyankar 1625a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 16263ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1627dcd589f8SShri Abhyankar 162867877ebaSShri Abhyankar /* analysis phase */ 162967877ebaSShri Abhyankar /*----------------*/ 1630a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1631a5e57a09SHong Zhang mumps->id.n = M; 1632a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 163367877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1634a5e57a09SHong Zhang if (!mumps->myid) { 1635a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1636a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1637940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 163867877ebaSShri Abhyankar } 1639a5e57a09SHong Zhang if (mumps->id.ICNTL(7) == 1) { /* use user-provide matrix ordering - assuming r = c ordering */ 16405248a706SHong Zhang /* 16415248a706SHong Zhang PetscBool flag; 16425248a706SHong Zhang ierr = ISEqual(r,c,&flag);CHKERRQ(ierr); 16435248a706SHong Zhang if (!flag) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"row_perm != col_perm"); 16445248a706SHong Zhang ierr = ISView(r,PETSC_VIEWER_STDOUT_SELF); 16455248a706SHong Zhang */ 1646a5e57a09SHong Zhang if (!mumps->myid) { 1647e0b74bf9SHong Zhang const PetscInt *idx; 1648e0b74bf9SHong Zhang PetscInt i,*perm_in; 16492205254eSKarl Rupp 1650785e854fSJed Brown ierr = PetscMalloc1(M,&perm_in);CHKERRQ(ierr); 1651e0b74bf9SHong Zhang ierr = ISGetIndices(r,&idx);CHKERRQ(ierr); 16522205254eSKarl Rupp 1653a5e57a09SHong Zhang mumps->id.perm_in = perm_in; 1654e0b74bf9SHong Zhang for (i=0; i<M; i++) perm_in[i] = idx[i]+1; /* perm_in[]: start from 1, not 0! */ 1655e0b74bf9SHong Zhang ierr = ISRestoreIndices(r,&idx);CHKERRQ(ierr); 1656e0b74bf9SHong Zhang } 1657e0b74bf9SHong Zhang } 165867877ebaSShri Abhyankar } 165967877ebaSShri Abhyankar break; 166067877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1661a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1662a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1663a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1664940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 166567877ebaSShri Abhyankar } 166667877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 16672a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 166894b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 16696bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 167067877ebaSShri Abhyankar break; 167167877ebaSShri Abhyankar } 16723ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 16735cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 167467877ebaSShri Abhyankar 1675719d5645SBarry Smith F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1676dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 167751d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 16784e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 1679eb3ef3b2SHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 1680b24902e0SBarry Smith PetscFunctionReturn(0); 1681b24902e0SBarry Smith } 1682b24902e0SBarry Smith 1683450b117fSShri Abhyankar /* Note the Petsc r and c permutations are ignored */ 1684450b117fSShri Abhyankar PetscErrorCode MatLUFactorSymbolic_BAIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1685450b117fSShri Abhyankar { 1686e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1687dcd589f8SShri Abhyankar PetscErrorCode ierr; 168867877ebaSShri Abhyankar Vec b; 168967877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1690450b117fSShri Abhyankar 1691450b117fSShri Abhyankar PetscFunctionBegin; 1692a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1693dcd589f8SShri Abhyankar 16949a2535b5SHong Zhang /* Set MUMPS options from the options database */ 16959a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1696dcd589f8SShri Abhyankar 1697a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 16983ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 169967877ebaSShri Abhyankar 170067877ebaSShri Abhyankar /* analysis phase */ 170167877ebaSShri Abhyankar /*----------------*/ 1702a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1703a5e57a09SHong Zhang mumps->id.n = M; 1704a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 170567877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1706a5e57a09SHong Zhang if (!mumps->myid) { 1707a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1708a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1709940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 171067877ebaSShri Abhyankar } 171167877ebaSShri Abhyankar } 171267877ebaSShri Abhyankar break; 171367877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1714a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1715a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1716a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1717940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 171867877ebaSShri Abhyankar } 171967877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 17202a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 172194b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 17226bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 172367877ebaSShri Abhyankar break; 172467877ebaSShri Abhyankar } 17253ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 17265cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 172767877ebaSShri Abhyankar 1728450b117fSShri Abhyankar F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1729dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 173051d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 1731450b117fSShri Abhyankar PetscFunctionReturn(0); 1732450b117fSShri Abhyankar } 1733b24902e0SBarry Smith 1734141f4205SHong Zhang /* Note the Petsc r permutation and factor info are ignored */ 173567877ebaSShri Abhyankar PetscErrorCode MatCholeskyFactorSymbolic_MUMPS(Mat F,Mat A,IS r,const MatFactorInfo *info) 1736b24902e0SBarry Smith { 1737e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1738dcd589f8SShri Abhyankar PetscErrorCode ierr; 173967877ebaSShri Abhyankar Vec b; 174067877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1741397b6df1SKris Buschelman 1742397b6df1SKris Buschelman PetscFunctionBegin; 1743a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1744dcd589f8SShri Abhyankar 17459a2535b5SHong Zhang /* Set MUMPS options from the options database */ 17469a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1747dcd589f8SShri Abhyankar 1748a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 17493ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1750dcd589f8SShri Abhyankar 175167877ebaSShri Abhyankar /* analysis phase */ 175267877ebaSShri Abhyankar /*----------------*/ 1753a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1754a5e57a09SHong Zhang mumps->id.n = M; 1755a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 175667877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1757a5e57a09SHong Zhang if (!mumps->myid) { 1758a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1759a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1760940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 176167877ebaSShri Abhyankar } 176267877ebaSShri Abhyankar } 176367877ebaSShri Abhyankar break; 176467877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1765a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1766a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1767a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1768940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 176967877ebaSShri Abhyankar } 177067877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 17712a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 177294b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 17736bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 177467877ebaSShri Abhyankar break; 177567877ebaSShri Abhyankar } 17763ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 17775cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 17785cd7cf9dSHong Zhang 17792792810eSHong Zhang F->ops->choleskyfactornumeric = MatFactorNumeric_MUMPS; 1780dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 178151d5961aSHong Zhang F->ops->solvetranspose = MatSolve_MUMPS; 17824e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 178323a5080aSHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 17844e34a73bSHong Zhang #if defined(PETSC_USE_COMPLEX) 17850298fd71SBarry Smith F->ops->getinertia = NULL; 17864e34a73bSHong Zhang #else 17874e34a73bSHong Zhang F->ops->getinertia = MatGetInertia_SBAIJMUMPS; 1788db4efbfdSBarry Smith #endif 1789b24902e0SBarry Smith PetscFunctionReturn(0); 1790b24902e0SBarry Smith } 1791b24902e0SBarry Smith 179264e6c443SBarry Smith PetscErrorCode MatView_MUMPS(Mat A,PetscViewer viewer) 179374ed9c26SBarry Smith { 1794f6c57405SHong Zhang PetscErrorCode ierr; 179564e6c443SBarry Smith PetscBool iascii; 179664e6c443SBarry Smith PetscViewerFormat format; 1797e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 1798f6c57405SHong Zhang 1799f6c57405SHong Zhang PetscFunctionBegin; 180064e6c443SBarry Smith /* check if matrix is mumps type */ 180164e6c443SBarry Smith if (A->ops->solve != MatSolve_MUMPS) PetscFunctionReturn(0); 180264e6c443SBarry Smith 1803251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 180464e6c443SBarry Smith if (iascii) { 180564e6c443SBarry Smith ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 180664e6c443SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO) { 180764e6c443SBarry Smith ierr = PetscViewerASCIIPrintf(viewer,"MUMPS run parameters:\n");CHKERRQ(ierr); 1808a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," SYM (matrix type): %d \n",mumps->id.sym);CHKERRQ(ierr); 1809a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," PAR (host participation): %d \n",mumps->id.par);CHKERRQ(ierr); 1810a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(1) (output for error): %d \n",mumps->id.ICNTL(1));CHKERRQ(ierr); 1811a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(2) (output of diagnostic msg): %d \n",mumps->id.ICNTL(2));CHKERRQ(ierr); 1812a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(3) (output for global info): %d \n",mumps->id.ICNTL(3));CHKERRQ(ierr); 1813a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(4) (level of printing): %d \n",mumps->id.ICNTL(4));CHKERRQ(ierr); 1814a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(5) (input mat struct): %d \n",mumps->id.ICNTL(5));CHKERRQ(ierr); 1815a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(6) (matrix prescaling): %d \n",mumps->id.ICNTL(6));CHKERRQ(ierr); 1816d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(7) (sequential matrix ordering):%d \n",mumps->id.ICNTL(7));CHKERRQ(ierr); 1817d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(8) (scaling strategy): %d \n",mumps->id.ICNTL(8));CHKERRQ(ierr); 1818a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(10) (max num of refinements): %d \n",mumps->id.ICNTL(10));CHKERRQ(ierr); 1819a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(11) (error analysis): %d \n",mumps->id.ICNTL(11));CHKERRQ(ierr); 1820a5e57a09SHong Zhang if (mumps->id.ICNTL(11)>0) { 1821a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(4) (inf norm of input mat): %g\n",mumps->id.RINFOG(4));CHKERRQ(ierr); 1822a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(5) (inf norm of solution): %g\n",mumps->id.RINFOG(5));CHKERRQ(ierr); 1823a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(6) (inf norm of residual): %g\n",mumps->id.RINFOG(6));CHKERRQ(ierr); 1824a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(7),RINFOG(8) (backward error est): %g, %g\n",mumps->id.RINFOG(7),mumps->id.RINFOG(8));CHKERRQ(ierr); 1825a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(9) (error estimate): %g \n",mumps->id.RINFOG(9));CHKERRQ(ierr); 1826a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(10),RINFOG(11)(condition numbers): %g, %g\n",mumps->id.RINFOG(10),mumps->id.RINFOG(11));CHKERRQ(ierr); 1827f6c57405SHong Zhang } 1828a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(12) (efficiency control): %d \n",mumps->id.ICNTL(12));CHKERRQ(ierr); 1829a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(13) (efficiency control): %d \n",mumps->id.ICNTL(13));CHKERRQ(ierr); 1830a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(14) (percentage of estimated workspace increase): %d \n",mumps->id.ICNTL(14));CHKERRQ(ierr); 1831f6c57405SHong Zhang /* ICNTL(15-17) not used */ 1832a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(18) (input mat struct): %d \n",mumps->id.ICNTL(18));CHKERRQ(ierr); 1833d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(19) (Schur complement info): %d \n",mumps->id.ICNTL(19));CHKERRQ(ierr); 1834a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(20) (rhs sparse pattern): %d \n",mumps->id.ICNTL(20));CHKERRQ(ierr); 1835ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," ICNTL(21) (solution struct): %d \n",mumps->id.ICNTL(21));CHKERRQ(ierr); 1836a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(22) (in-core/out-of-core facility): %d \n",mumps->id.ICNTL(22));CHKERRQ(ierr); 1837a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(23) (max size of memory can be allocated locally):%d \n",mumps->id.ICNTL(23));CHKERRQ(ierr); 1838c0165424SHong Zhang 1839a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(24) (detection of null pivot rows): %d \n",mumps->id.ICNTL(24));CHKERRQ(ierr); 1840a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(25) (computation of a null space basis): %d \n",mumps->id.ICNTL(25));CHKERRQ(ierr); 1841a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(26) (Schur options for rhs or solution): %d \n",mumps->id.ICNTL(26));CHKERRQ(ierr); 1842a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(27) (experimental parameter): %d \n",mumps->id.ICNTL(27));CHKERRQ(ierr); 1843a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(28) (use parallel or sequential ordering): %d \n",mumps->id.ICNTL(28));CHKERRQ(ierr); 1844a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(29) (parallel ordering): %d \n",mumps->id.ICNTL(29));CHKERRQ(ierr); 184542179a6aSHong Zhang 1846a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(30) (user-specified set of entries in inv(A)): %d \n",mumps->id.ICNTL(30));CHKERRQ(ierr); 1847a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(31) (factors is discarded in the solve phase): %d \n",mumps->id.ICNTL(31));CHKERRQ(ierr); 1848a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(33) (compute determinant): %d \n",mumps->id.ICNTL(33));CHKERRQ(ierr); 18496e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(35) (activate BLR based factorization): %d \n",mumps->id.ICNTL(35));CHKERRQ(ierr); 1850a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(36) (choice of BLR factorization variant): %d \n",mumps->id.ICNTL(36));CHKERRQ(ierr); 1851a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(38) (estimated compression rate of LU factors): %d \n",mumps->id.ICNTL(38));CHKERRQ(ierr); 1852f6c57405SHong Zhang 1853a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(1) (relative pivoting threshold): %g \n",mumps->id.CNTL(1));CHKERRQ(ierr); 1854a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(2) (stopping criterion of refinement): %g \n",mumps->id.CNTL(2));CHKERRQ(ierr); 1855ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(3) (absolute pivoting threshold): %g \n",mumps->id.CNTL(3));CHKERRQ(ierr); 1856ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(4) (value of static pivoting): %g \n",mumps->id.CNTL(4));CHKERRQ(ierr); 1857a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(5) (fixation for null pivots): %g \n",mumps->id.CNTL(5));CHKERRQ(ierr); 18586e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(7) (dropping parameter for BLR): %g \n",mumps->id.CNTL(7));CHKERRQ(ierr); 1859f6c57405SHong Zhang 1860f6c57405SHong Zhang /* infomation local to each processor */ 186134ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(1) (local estimated flops for the elimination after analysis): \n");CHKERRQ(ierr); 18621575c14dSBarry Smith ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr); 1863a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(1));CHKERRQ(ierr); 18642a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 186534ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(2) (local estimated flops for the assembly after factorization): \n");CHKERRQ(ierr); 1866a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(2));CHKERRQ(ierr); 18672a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 186834ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(3) (local estimated flops for the elimination after factorization): \n");CHKERRQ(ierr); 1869a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(3));CHKERRQ(ierr); 18702a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1871f6c57405SHong Zhang 187234ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(15) (estimated size of (in MB) MUMPS internal data for running numerical factorization): \n");CHKERRQ(ierr); 1873a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(15));CHKERRQ(ierr); 18742a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1875f6c57405SHong Zhang 187634ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(16) (size of (in MB) MUMPS internal data used during numerical factorization): \n");CHKERRQ(ierr); 1877a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(16));CHKERRQ(ierr); 18782a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1879f6c57405SHong Zhang 188034ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(23) (num of pivots eliminated on this processor after factorization): \n");CHKERRQ(ierr); 1881a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(23));CHKERRQ(ierr); 18822a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1883b34f08ffSHong Zhang 1884a0e18203SThibaut Appel if (mumps->ninfo && mumps->ninfo <= 80){ 1885b34f08ffSHong Zhang PetscInt i; 1886b34f08ffSHong Zhang for (i=0; i<mumps->ninfo; i++){ 1887b34f08ffSHong Zhang ierr = PetscViewerASCIIPrintf(viewer, " INFO(%d): \n",mumps->info[i]);CHKERRQ(ierr); 1888b34f08ffSHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(mumps->info[i]));CHKERRQ(ierr); 18892a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1890b34f08ffSHong Zhang } 1891b34f08ffSHong Zhang } 18921575c14dSBarry Smith ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr); 1893f6c57405SHong Zhang 1894a5e57a09SHong Zhang if (!mumps->myid) { /* information from the host */ 1895a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(1) (global estimated flops for the elimination after analysis): %g \n",mumps->id.RINFOG(1));CHKERRQ(ierr); 1896a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(2) (global estimated flops for the assembly after factorization): %g \n",mumps->id.RINFOG(2));CHKERRQ(ierr); 1897a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(3) (global estimated flops for the elimination after factorization): %g \n",mumps->id.RINFOG(3));CHKERRQ(ierr); 1898a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," (RINFOG(12) RINFOG(13))*2^INFOG(34) (determinant): (%g,%g)*(2^%d)\n",mumps->id.RINFOG(12),mumps->id.RINFOG(13),mumps->id.INFOG(34));CHKERRQ(ierr); 1899f6c57405SHong Zhang 1900a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(3) (estimated real workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(3));CHKERRQ(ierr); 1901a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(4) (estimated integer workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(4));CHKERRQ(ierr); 1902a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(5) (estimated maximum front size in the complete tree): %d \n",mumps->id.INFOG(5));CHKERRQ(ierr); 1903a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(6) (number of nodes in the complete tree): %d \n",mumps->id.INFOG(6));CHKERRQ(ierr); 1904a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(7) (ordering option effectively use after analysis): %d \n",mumps->id.INFOG(7));CHKERRQ(ierr); 1905a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(8) (structural symmetry in percent of the permuted matrix after analysis): %d \n",mumps->id.INFOG(8));CHKERRQ(ierr); 1906a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(9) (total real/complex workspace to store the matrix factors after factorization): %d \n",mumps->id.INFOG(9));CHKERRQ(ierr); 1907a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(10) (total integer space store the matrix factors after factorization): %d \n",mumps->id.INFOG(10));CHKERRQ(ierr); 1908a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(11) (order of largest frontal matrix after factorization): %d \n",mumps->id.INFOG(11));CHKERRQ(ierr); 1909a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(12) (number of off-diagonal pivots): %d \n",mumps->id.INFOG(12));CHKERRQ(ierr); 1910a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(13) (number of delayed pivots after factorization): %d \n",mumps->id.INFOG(13));CHKERRQ(ierr); 1911a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(14) (number of memory compress after factorization): %d \n",mumps->id.INFOG(14));CHKERRQ(ierr); 1912a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(15) (number of steps of iterative refinement after solution): %d \n",mumps->id.INFOG(15));CHKERRQ(ierr); 1913a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(16) (estimated size (in MB) of all MUMPS internal data for factorization after analysis: value on the most memory consuming processor): %d \n",mumps->id.INFOG(16));CHKERRQ(ierr); 1914a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(17) (estimated size of all MUMPS internal data for factorization after analysis: sum over all processors): %d \n",mumps->id.INFOG(17));CHKERRQ(ierr); 1915a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(18) (size of all MUMPS internal data allocated during factorization: value on the most memory consuming processor): %d \n",mumps->id.INFOG(18));CHKERRQ(ierr); 1916a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(19) (size of all MUMPS internal data allocated during factorization: sum over all processors): %d \n",mumps->id.INFOG(19));CHKERRQ(ierr); 1917a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(20) (estimated number of entries in the factors): %d \n",mumps->id.INFOG(20));CHKERRQ(ierr); 1918a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(21) (size in MB of memory effectively used during factorization - value on the most memory consuming processor): %d \n",mumps->id.INFOG(21));CHKERRQ(ierr); 1919a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(22) (size in MB of memory effectively used during factorization - sum over all processors): %d \n",mumps->id.INFOG(22));CHKERRQ(ierr); 1920a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(23) (after analysis: value of ICNTL(6) effectively used): %d \n",mumps->id.INFOG(23));CHKERRQ(ierr); 1921a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(24) (after analysis: value of ICNTL(12) effectively used): %d \n",mumps->id.INFOG(24));CHKERRQ(ierr); 1922a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(25) (after factorization: number of pivots modified by static pivoting): %d \n",mumps->id.INFOG(25));CHKERRQ(ierr); 192340d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(28) (after factorization: number of null pivots encountered): %d\n",mumps->id.INFOG(28));CHKERRQ(ierr); 192440d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(29) (after factorization: effective number of entries in the factors (sum over all processors)): %d\n",mumps->id.INFOG(29));CHKERRQ(ierr); 192540d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(30, 31) (after solution: size in Mbytes of memory used during solution phase): %d, %d\n",mumps->id.INFOG(30),mumps->id.INFOG(31));CHKERRQ(ierr); 192640d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(32) (after analysis: type of analysis done): %d\n",mumps->id.INFOG(32));CHKERRQ(ierr); 192740d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(33) (value used for ICNTL(8)): %d\n",mumps->id.INFOG(33));CHKERRQ(ierr); 192840d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(34) (exponent of the determinant if determinant is requested): %d\n",mumps->id.INFOG(34));CHKERRQ(ierr); 1929a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(35) (after factorization: number of entries taking into account BLR factor compression - sum over all processors): %d\n",mumps->id.INFOG(35));CHKERRQ(ierr); 1930a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(36) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(36));CHKERRQ(ierr); 1931a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(37) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - sum over all processors): %d \n",mumps->id.INFOG(37));CHKERRQ(ierr); 1932a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(38) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(38));CHKERRQ(ierr); 1933a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(39) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - sum over all processors): %d \n",mumps->id.INFOG(39));CHKERRQ(ierr); 1934f6c57405SHong Zhang } 1935f6c57405SHong Zhang } 1936cb828f0fSHong Zhang } 1937f6c57405SHong Zhang PetscFunctionReturn(0); 1938f6c57405SHong Zhang } 1939f6c57405SHong Zhang 194035bd34faSBarry Smith PetscErrorCode MatGetInfo_MUMPS(Mat A,MatInfoType flag,MatInfo *info) 194135bd34faSBarry Smith { 1942e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)A->data; 194335bd34faSBarry Smith 194435bd34faSBarry Smith PetscFunctionBegin; 194535bd34faSBarry Smith info->block_size = 1.0; 1946cb828f0fSHong Zhang info->nz_allocated = mumps->id.INFOG(20); 1947cb828f0fSHong Zhang info->nz_used = mumps->id.INFOG(20); 194835bd34faSBarry Smith info->nz_unneeded = 0.0; 194935bd34faSBarry Smith info->assemblies = 0.0; 195035bd34faSBarry Smith info->mallocs = 0.0; 195135bd34faSBarry Smith info->memory = 0.0; 195235bd34faSBarry Smith info->fill_ratio_given = 0; 195335bd34faSBarry Smith info->fill_ratio_needed = 0; 195435bd34faSBarry Smith info->factor_mallocs = 0; 195535bd34faSBarry Smith PetscFunctionReturn(0); 195635bd34faSBarry Smith } 195735bd34faSBarry Smith 19585ccb76cbSHong Zhang /* -------------------------------------------------------------------------------------------*/ 19598e7ba810SStefano Zampini PetscErrorCode MatFactorSetSchurIS_MUMPS(Mat F, IS is) 19606444a565SStefano Zampini { 1961e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1962a3d589ffSStefano Zampini const PetscScalar *arr; 19638e7ba810SStefano Zampini const PetscInt *idxs; 19648e7ba810SStefano Zampini PetscInt size,i; 19656444a565SStefano Zampini PetscErrorCode ierr; 19666444a565SStefano Zampini 19676444a565SStefano Zampini PetscFunctionBegin; 1968b3cb21ddSStefano Zampini ierr = ISGetLocalSize(is,&size);CHKERRQ(ierr); 19692d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 19703ab56b82SJunchao Zhang PetscBool ls,gs; /* gs is false if any rank other than root has non-empty IS */ 1971241dbb5eSStefano Zampini 19723ab56b82SJunchao Zhang ls = mumps->myid ? (size ? PETSC_FALSE : PETSC_TRUE) : PETSC_TRUE; /* always true on root; false on others if their size != 0 */ 19733ab56b82SJunchao Zhang ierr = MPI_Allreduce(&ls,&gs,1,MPIU_BOOL,MPI_LAND,mumps->petsc_comm);CHKERRQ(ierr); 1974241dbb5eSStefano Zampini if (!gs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MUMPS distributed parallel Schur complements not yet supported from PETSc\n"); 1975241dbb5eSStefano Zampini } 1976b3cb21ddSStefano Zampini 1977b3cb21ddSStefano Zampini /* Schur complement matrix */ 1978a3d589ffSStefano Zampini ierr = MatDestroy(&F->schur);CHKERRQ(ierr); 1979a3d589ffSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,size,size,NULL,&F->schur);CHKERRQ(ierr); 1980a3d589ffSStefano Zampini ierr = MatDenseGetArrayRead(F->schur,&arr);CHKERRQ(ierr); 1981a3d589ffSStefano Zampini mumps->id.schur = (MumpsScalar*)arr; 1982a3d589ffSStefano Zampini mumps->id.size_schur = size; 1983a3d589ffSStefano Zampini mumps->id.schur_lld = size; 1984a3d589ffSStefano Zampini ierr = MatDenseRestoreArrayRead(F->schur,&arr);CHKERRQ(ierr); 1985b3cb21ddSStefano Zampini if (mumps->sym == 1) { 1986b3cb21ddSStefano Zampini ierr = MatSetOption(F->schur,MAT_SPD,PETSC_TRUE);CHKERRQ(ierr); 1987b3cb21ddSStefano Zampini } 1988b3cb21ddSStefano Zampini 1989b3cb21ddSStefano Zampini /* MUMPS expects Fortran style indices */ 1990a3d589ffSStefano Zampini ierr = PetscFree(mumps->id.listvar_schur);CHKERRQ(ierr); 1991a3d589ffSStefano Zampini ierr = PetscMalloc1(size,&mumps->id.listvar_schur);CHKERRQ(ierr); 19928e7ba810SStefano Zampini ierr = ISGetIndices(is,&idxs);CHKERRQ(ierr); 1993580bdb30SBarry Smith ierr = PetscArraycpy(mumps->id.listvar_schur,idxs,size);CHKERRQ(ierr); 19948e7ba810SStefano Zampini for (i=0;i<size;i++) mumps->id.listvar_schur[i]++; 19958e7ba810SStefano Zampini ierr = ISRestoreIndices(is,&idxs);CHKERRQ(ierr); 19962d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 1997241dbb5eSStefano Zampini mumps->id.ICNTL(19) = 1; /* MUMPS returns Schur centralized on the host */ 1998241dbb5eSStefano Zampini } else { 19996444a565SStefano Zampini if (F->factortype == MAT_FACTOR_LU) { 200059ac8732SStefano Zampini mumps->id.ICNTL(19) = 3; /* MUMPS returns full matrix */ 20016444a565SStefano Zampini } else { 200259ac8732SStefano Zampini mumps->id.ICNTL(19) = 2; /* MUMPS returns lower triangular part */ 20036444a565SStefano Zampini } 2004241dbb5eSStefano Zampini } 200559ac8732SStefano Zampini /* set a special value of ICNTL (not handled my MUMPS) to be used in the solve phase by PETSc */ 2006b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 20076444a565SStefano Zampini PetscFunctionReturn(0); 20086444a565SStefano Zampini } 200959ac8732SStefano Zampini 20106444a565SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 20115a05ddb0SStefano Zampini PetscErrorCode MatFactorCreateSchurComplement_MUMPS(Mat F,Mat* S) 20126444a565SStefano Zampini { 20136444a565SStefano Zampini Mat St; 2014e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 20156444a565SStefano Zampini PetscScalar *array; 20166444a565SStefano Zampini #if defined(PETSC_USE_COMPLEX) 20178ac429a0SStefano Zampini PetscScalar im = PetscSqrtScalar((PetscScalar)-1.0); 20186444a565SStefano Zampini #endif 20196444a565SStefano Zampini PetscErrorCode ierr; 20206444a565SStefano Zampini 20216444a565SStefano Zampini PetscFunctionBegin; 20225a05ddb0SStefano Zampini if (!mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it"); 2023241dbb5eSStefano Zampini ierr = MatCreate(PETSC_COMM_SELF,&St);CHKERRQ(ierr); 20246444a565SStefano Zampini ierr = MatSetSizes(St,PETSC_DECIDE,PETSC_DECIDE,mumps->id.size_schur,mumps->id.size_schur);CHKERRQ(ierr); 20256444a565SStefano Zampini ierr = MatSetType(St,MATDENSE);CHKERRQ(ierr); 20266444a565SStefano Zampini ierr = MatSetUp(St);CHKERRQ(ierr); 20276444a565SStefano Zampini ierr = MatDenseGetArray(St,&array);CHKERRQ(ierr); 202859ac8732SStefano Zampini if (!mumps->sym) { /* MUMPS always return a full matrix */ 20296444a565SStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 20306444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 20316444a565SStefano Zampini for (i=0;i<N;i++) { 20326444a565SStefano Zampini for (j=0;j<N;j++) { 20336444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 20346444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 20356444a565SStefano Zampini #else 20366444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 20376444a565SStefano Zampini #endif 20386444a565SStefano Zampini array[j*N+i] = val; 20396444a565SStefano Zampini } 20406444a565SStefano Zampini } 20416444a565SStefano Zampini } else { /* stored by columns */ 2042580bdb30SBarry Smith ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr); 20436444a565SStefano Zampini } 20446444a565SStefano Zampini } else { /* either full or lower-triangular (not packed) */ 20456444a565SStefano Zampini if (mumps->id.ICNTL(19) == 2) { /* lower triangular stored by columns */ 20466444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 20476444a565SStefano Zampini for (i=0;i<N;i++) { 20486444a565SStefano Zampini for (j=i;j<N;j++) { 20496444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 20506444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 20516444a565SStefano Zampini #else 20526444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 20536444a565SStefano Zampini #endif 20546444a565SStefano Zampini array[i*N+j] = val; 20556444a565SStefano Zampini array[j*N+i] = val; 20566444a565SStefano Zampini } 20576444a565SStefano Zampini } 20586444a565SStefano Zampini } else if (mumps->id.ICNTL(19) == 3) { /* full matrix */ 2059580bdb30SBarry Smith ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr); 20606444a565SStefano Zampini } else { /* ICNTL(19) == 1 lower triangular stored by rows */ 20616444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 20626444a565SStefano Zampini for (i=0;i<N;i++) { 20636444a565SStefano Zampini for (j=0;j<i+1;j++) { 20646444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 20656444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 20666444a565SStefano Zampini #else 20676444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 20686444a565SStefano Zampini #endif 20696444a565SStefano Zampini array[i*N+j] = val; 20706444a565SStefano Zampini array[j*N+i] = val; 20716444a565SStefano Zampini } 20726444a565SStefano Zampini } 20736444a565SStefano Zampini } 20746444a565SStefano Zampini } 20756444a565SStefano Zampini ierr = MatDenseRestoreArray(St,&array);CHKERRQ(ierr); 20766444a565SStefano Zampini *S = St; 20776444a565SStefano Zampini PetscFunctionReturn(0); 20786444a565SStefano Zampini } 20796444a565SStefano Zampini 208059ac8732SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 20815ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt ival) 20825ccb76cbSHong Zhang { 2083e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 20845ccb76cbSHong Zhang 20855ccb76cbSHong Zhang PetscFunctionBegin; 2086a5e57a09SHong Zhang mumps->id.ICNTL(icntl) = ival; 20875ccb76cbSHong Zhang PetscFunctionReturn(0); 20885ccb76cbSHong Zhang } 20895ccb76cbSHong Zhang 2090bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt *ival) 2091bc6112feSHong Zhang { 2092e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2093bc6112feSHong Zhang 2094bc6112feSHong Zhang PetscFunctionBegin; 2095bc6112feSHong Zhang *ival = mumps->id.ICNTL(icntl); 2096bc6112feSHong Zhang PetscFunctionReturn(0); 2097bc6112feSHong Zhang } 2098bc6112feSHong Zhang 20995ccb76cbSHong Zhang /*@ 21005ccb76cbSHong Zhang MatMumpsSetIcntl - Set MUMPS parameter ICNTL() 21015ccb76cbSHong Zhang 21025ccb76cbSHong Zhang Logically Collective on Mat 21035ccb76cbSHong Zhang 21045ccb76cbSHong Zhang Input Parameters: 21055ccb76cbSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 21065ccb76cbSHong Zhang . icntl - index of MUMPS parameter array ICNTL() 21075ccb76cbSHong Zhang - ival - value of MUMPS ICNTL(icntl) 21085ccb76cbSHong Zhang 21095ccb76cbSHong Zhang Options Database: 21105ccb76cbSHong Zhang . -mat_mumps_icntl_<icntl> <ival> 21115ccb76cbSHong Zhang 21125ccb76cbSHong Zhang Level: beginner 21135ccb76cbSHong Zhang 211496a0c994SBarry Smith References: 211596a0c994SBarry Smith . MUMPS Users' Guide 21165ccb76cbSHong Zhang 21179fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 21185ccb76cbSHong Zhang @*/ 21195ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl(Mat F,PetscInt icntl,PetscInt ival) 21205ccb76cbSHong Zhang { 21215ccb76cbSHong Zhang PetscErrorCode ierr; 21225ccb76cbSHong Zhang 21235ccb76cbSHong Zhang PetscFunctionBegin; 21242989dfd4SHong Zhang PetscValidType(F,1); 21252989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 21265ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 21275ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,ival,3); 21285ccb76cbSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetIcntl_C",(Mat,PetscInt,PetscInt),(F,icntl,ival));CHKERRQ(ierr); 21295ccb76cbSHong Zhang PetscFunctionReturn(0); 21305ccb76cbSHong Zhang } 21315ccb76cbSHong Zhang 2132a21f80fcSHong Zhang /*@ 2133a21f80fcSHong Zhang MatMumpsGetIcntl - Get MUMPS parameter ICNTL() 2134a21f80fcSHong Zhang 2135a21f80fcSHong Zhang Logically Collective on Mat 2136a21f80fcSHong Zhang 2137a21f80fcSHong Zhang Input Parameters: 2138a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2139a21f80fcSHong Zhang - icntl - index of MUMPS parameter array ICNTL() 2140a21f80fcSHong Zhang 2141a21f80fcSHong Zhang Output Parameter: 2142a21f80fcSHong Zhang . ival - value of MUMPS ICNTL(icntl) 2143a21f80fcSHong Zhang 2144a21f80fcSHong Zhang Level: beginner 2145a21f80fcSHong Zhang 214696a0c994SBarry Smith References: 214796a0c994SBarry Smith . MUMPS Users' Guide 2148a21f80fcSHong Zhang 21499fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2150a21f80fcSHong Zhang @*/ 2151bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl(Mat F,PetscInt icntl,PetscInt *ival) 2152bc6112feSHong Zhang { 2153bc6112feSHong Zhang PetscErrorCode ierr; 2154bc6112feSHong Zhang 2155bc6112feSHong Zhang PetscFunctionBegin; 21562989dfd4SHong Zhang PetscValidType(F,1); 21572989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2158bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2159bc6112feSHong Zhang PetscValidIntPointer(ival,3); 21602989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetIcntl_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2161bc6112feSHong Zhang PetscFunctionReturn(0); 2162bc6112feSHong Zhang } 2163bc6112feSHong Zhang 21648928b65cSHong Zhang /* -------------------------------------------------------------------------------------------*/ 21658928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal val) 21668928b65cSHong Zhang { 2167e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 21688928b65cSHong Zhang 21698928b65cSHong Zhang PetscFunctionBegin; 21708928b65cSHong Zhang mumps->id.CNTL(icntl) = val; 21718928b65cSHong Zhang PetscFunctionReturn(0); 21728928b65cSHong Zhang } 21738928b65cSHong Zhang 2174bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal *val) 2175bc6112feSHong Zhang { 2176e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2177bc6112feSHong Zhang 2178bc6112feSHong Zhang PetscFunctionBegin; 2179bc6112feSHong Zhang *val = mumps->id.CNTL(icntl); 2180bc6112feSHong Zhang PetscFunctionReturn(0); 2181bc6112feSHong Zhang } 2182bc6112feSHong Zhang 21838928b65cSHong Zhang /*@ 21848928b65cSHong Zhang MatMumpsSetCntl - Set MUMPS parameter CNTL() 21858928b65cSHong Zhang 21868928b65cSHong Zhang Logically Collective on Mat 21878928b65cSHong Zhang 21888928b65cSHong Zhang Input Parameters: 21898928b65cSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 21908928b65cSHong Zhang . icntl - index of MUMPS parameter array CNTL() 21918928b65cSHong Zhang - val - value of MUMPS CNTL(icntl) 21928928b65cSHong Zhang 21938928b65cSHong Zhang Options Database: 21948928b65cSHong Zhang . -mat_mumps_cntl_<icntl> <val> 21958928b65cSHong Zhang 21968928b65cSHong Zhang Level: beginner 21978928b65cSHong Zhang 219896a0c994SBarry Smith References: 219996a0c994SBarry Smith . MUMPS Users' Guide 22008928b65cSHong Zhang 22019fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 22028928b65cSHong Zhang @*/ 22038928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl(Mat F,PetscInt icntl,PetscReal val) 22048928b65cSHong Zhang { 22058928b65cSHong Zhang PetscErrorCode ierr; 22068928b65cSHong Zhang 22078928b65cSHong Zhang PetscFunctionBegin; 22082989dfd4SHong Zhang PetscValidType(F,1); 22092989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 22108928b65cSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2211bc6112feSHong Zhang PetscValidLogicalCollectiveReal(F,val,3); 22128928b65cSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetCntl_C",(Mat,PetscInt,PetscReal),(F,icntl,val));CHKERRQ(ierr); 22138928b65cSHong Zhang PetscFunctionReturn(0); 22148928b65cSHong Zhang } 22158928b65cSHong Zhang 2216a21f80fcSHong Zhang /*@ 2217a21f80fcSHong Zhang MatMumpsGetCntl - Get MUMPS parameter CNTL() 2218a21f80fcSHong Zhang 2219a21f80fcSHong Zhang Logically Collective on Mat 2220a21f80fcSHong Zhang 2221a21f80fcSHong Zhang Input Parameters: 2222a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2223a21f80fcSHong Zhang - icntl - index of MUMPS parameter array CNTL() 2224a21f80fcSHong Zhang 2225a21f80fcSHong Zhang Output Parameter: 2226a21f80fcSHong Zhang . val - value of MUMPS CNTL(icntl) 2227a21f80fcSHong Zhang 2228a21f80fcSHong Zhang Level: beginner 2229a21f80fcSHong Zhang 223096a0c994SBarry Smith References: 223196a0c994SBarry Smith . MUMPS Users' Guide 2232a21f80fcSHong Zhang 22339fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2234a21f80fcSHong Zhang @*/ 2235bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl(Mat F,PetscInt icntl,PetscReal *val) 2236bc6112feSHong Zhang { 2237bc6112feSHong Zhang PetscErrorCode ierr; 2238bc6112feSHong Zhang 2239bc6112feSHong Zhang PetscFunctionBegin; 22402989dfd4SHong Zhang PetscValidType(F,1); 22412989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2242bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2243bc6112feSHong Zhang PetscValidRealPointer(val,3); 22442989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetCntl_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2245bc6112feSHong Zhang PetscFunctionReturn(0); 2246bc6112feSHong Zhang } 2247bc6112feSHong Zhang 2248ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo_MUMPS(Mat F,PetscInt icntl,PetscInt *info) 2249bc6112feSHong Zhang { 2250e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2251bc6112feSHong Zhang 2252bc6112feSHong Zhang PetscFunctionBegin; 2253bc6112feSHong Zhang *info = mumps->id.INFO(icntl); 2254bc6112feSHong Zhang PetscFunctionReturn(0); 2255bc6112feSHong Zhang } 2256bc6112feSHong Zhang 2257ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog_MUMPS(Mat F,PetscInt icntl,PetscInt *infog) 2258bc6112feSHong Zhang { 2259e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2260bc6112feSHong Zhang 2261bc6112feSHong Zhang PetscFunctionBegin; 2262bc6112feSHong Zhang *infog = mumps->id.INFOG(icntl); 2263bc6112feSHong Zhang PetscFunctionReturn(0); 2264bc6112feSHong Zhang } 2265bc6112feSHong Zhang 2266ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfo) 2267bc6112feSHong Zhang { 2268e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2269bc6112feSHong Zhang 2270bc6112feSHong Zhang PetscFunctionBegin; 2271bc6112feSHong Zhang *rinfo = mumps->id.RINFO(icntl); 2272bc6112feSHong Zhang PetscFunctionReturn(0); 2273bc6112feSHong Zhang } 2274bc6112feSHong Zhang 2275ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfog) 2276bc6112feSHong Zhang { 2277e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2278bc6112feSHong Zhang 2279bc6112feSHong Zhang PetscFunctionBegin; 2280bc6112feSHong Zhang *rinfog = mumps->id.RINFOG(icntl); 2281bc6112feSHong Zhang PetscFunctionReturn(0); 2282bc6112feSHong Zhang } 2283bc6112feSHong Zhang 228489a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse_MUMPS(Mat F,Mat spRHS) 2285bb599dfdSHong Zhang { 2286bb599dfdSHong Zhang PetscErrorCode ierr; 22870e6b8875SHong Zhang Mat Bt = NULL,Btseq = NULL; 22880e6b8875SHong Zhang PetscBool flg; 2289bb599dfdSHong Zhang Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2290bb599dfdSHong Zhang PetscScalar *aa; 2291f410b75aSHong Zhang PetscInt spnr,*ia,*ja,M,nrhs; 2292bb599dfdSHong Zhang 2293bb599dfdSHong Zhang PetscFunctionBegin; 2294e3f2db6aSHong Zhang PetscValidIntPointer(spRHS,2); 22950e6b8875SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)spRHS,MATTRANSPOSEMAT,&flg);CHKERRQ(ierr); 22960e6b8875SHong Zhang if (flg) { 2297bb599dfdSHong Zhang ierr = MatTransposeGetMat(spRHS,&Bt);CHKERRQ(ierr); 22980e6b8875SHong Zhang } else SETERRQ(PetscObjectComm((PetscObject)spRHS),PETSC_ERR_ARG_WRONG,"Matrix spRHS must be type MATTRANSPOSEMAT matrix"); 2299bb599dfdSHong Zhang 2300bb599dfdSHong Zhang ierr = MatMumpsSetIcntl(F,30,1);CHKERRQ(ierr); 2301bb599dfdSHong Zhang 23022d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 23030e6b8875SHong Zhang Mat_MPIAIJ *b = (Mat_MPIAIJ*)Bt->data; 23040e6b8875SHong Zhang Btseq = b->A; 23050e6b8875SHong Zhang } else { 23060e6b8875SHong Zhang Btseq = Bt; 23070e6b8875SHong Zhang } 23080e6b8875SHong Zhang 2309f410b75aSHong Zhang ierr = MatGetSize(spRHS,&M,&nrhs);CHKERRQ(ierr); 2310f410b75aSHong Zhang mumps->id.nrhs = nrhs; 2311f410b75aSHong Zhang mumps->id.lrhs = M; 2312f410b75aSHong Zhang mumps->id.rhs = NULL; 2313f410b75aSHong Zhang 2314e3f2db6aSHong Zhang if (!mumps->myid) { 23150e6b8875SHong Zhang ierr = MatSeqAIJGetArray(Btseq,&aa);CHKERRQ(ierr); 23160e6b8875SHong Zhang ierr = MatGetRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 23170e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2318bb599dfdSHong Zhang 2319bb599dfdSHong Zhang mumps->id.irhs_ptr = ia; 2320bb599dfdSHong Zhang mumps->id.irhs_sparse = ja; 2321bb599dfdSHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 2322bb599dfdSHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 2323e3f2db6aSHong Zhang } else { 2324e3f2db6aSHong Zhang mumps->id.irhs_ptr = NULL; 2325e3f2db6aSHong Zhang mumps->id.irhs_sparse = NULL; 2326e3f2db6aSHong Zhang mumps->id.nz_rhs = 0; 2327e3f2db6aSHong Zhang mumps->id.rhs_sparse = NULL; 2328e3f2db6aSHong Zhang } 2329bb599dfdSHong Zhang mumps->id.ICNTL(20) = 1; /* rhs is sparse */ 2330e3f2db6aSHong Zhang mumps->id.ICNTL(21) = 0; /* solution is in assembled centralized format */ 2331bb599dfdSHong Zhang 2332bb599dfdSHong Zhang /* solve phase */ 2333bb599dfdSHong Zhang /*-------------*/ 2334bb599dfdSHong Zhang mumps->id.job = JOB_SOLVE; 23353ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 2336e3f2db6aSHong Zhang if (mumps->id.INFOG(1) < 0) 2337e3f2db6aSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 233814267174SHong Zhang 2339e3f2db6aSHong Zhang if (!mumps->myid) { 23400e6b8875SHong Zhang ierr = MatSeqAIJRestoreArray(Btseq,&aa);CHKERRQ(ierr); 23410e6b8875SHong Zhang ierr = MatRestoreRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 23420e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2343e3f2db6aSHong Zhang } 2344bb599dfdSHong Zhang PetscFunctionReturn(0); 2345bb599dfdSHong Zhang } 2346bb599dfdSHong Zhang 2347bb599dfdSHong Zhang /*@ 234889a9c03aSHong Zhang MatMumpsGetInverse - Get user-specified set of entries in inverse of A 2349bb599dfdSHong Zhang 2350bb599dfdSHong Zhang Logically Collective on Mat 2351bb599dfdSHong Zhang 2352bb599dfdSHong Zhang Input Parameters: 2353bb599dfdSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2354e3f2db6aSHong Zhang - spRHS - sequential sparse matrix in MATTRANSPOSEMAT format holding specified indices in processor[0] 2355bb599dfdSHong Zhang 2356bb599dfdSHong Zhang Output Parameter: 2357e3f2db6aSHong Zhang . spRHS - requested entries of inverse of A 2358bb599dfdSHong Zhang 2359bb599dfdSHong Zhang Level: beginner 2360bb599dfdSHong Zhang 2361bb599dfdSHong Zhang References: 2362bb599dfdSHong Zhang . MUMPS Users' Guide 2363bb599dfdSHong Zhang 2364bb599dfdSHong Zhang .seealso: MatGetFactor(), MatCreateTranspose() 2365bb599dfdSHong Zhang @*/ 236689a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse(Mat F,Mat spRHS) 2367bb599dfdSHong Zhang { 2368bb599dfdSHong Zhang PetscErrorCode ierr; 2369bb599dfdSHong Zhang 2370bb599dfdSHong Zhang PetscFunctionBegin; 2371bb599dfdSHong Zhang PetscValidType(F,1); 2372bb599dfdSHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 237389a9c03aSHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverse_C",(Mat,Mat),(F,spRHS));CHKERRQ(ierr); 2374bb599dfdSHong Zhang PetscFunctionReturn(0); 2375bb599dfdSHong Zhang } 2376bb599dfdSHong Zhang 23770e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose_MUMPS(Mat F,Mat spRHST) 23780e6b8875SHong Zhang { 23790e6b8875SHong Zhang PetscErrorCode ierr; 23800e6b8875SHong Zhang Mat spRHS; 23810e6b8875SHong Zhang 23820e6b8875SHong Zhang PetscFunctionBegin; 23830e6b8875SHong Zhang ierr = MatCreateTranspose(spRHST,&spRHS);CHKERRQ(ierr); 23840e6b8875SHong Zhang ierr = MatMumpsGetInverse_MUMPS(F,spRHS);CHKERRQ(ierr); 23850e6b8875SHong Zhang ierr = MatDestroy(&spRHS);CHKERRQ(ierr); 23860e6b8875SHong Zhang PetscFunctionReturn(0); 23870e6b8875SHong Zhang } 23880e6b8875SHong Zhang 23890e6b8875SHong Zhang /*@ 2390eef1237cSHong Zhang MatMumpsGetInverseTranspose - Get user-specified set of entries in inverse of matrix A^T 23910e6b8875SHong Zhang 23920e6b8875SHong Zhang Logically Collective on Mat 23930e6b8875SHong Zhang 23940e6b8875SHong Zhang Input Parameters: 23950e6b8875SHong Zhang + F - the factored matrix of A obtained by calling MatGetFactor() from PETSc-MUMPS interface 23960e6b8875SHong Zhang - spRHST - sequential sparse matrix in MATAIJ format holding specified indices of A^T in processor[0] 23970e6b8875SHong Zhang 23980e6b8875SHong Zhang Output Parameter: 23990e6b8875SHong Zhang . spRHST - requested entries of inverse of A^T 24000e6b8875SHong Zhang 24010e6b8875SHong Zhang Level: beginner 24020e6b8875SHong Zhang 24030e6b8875SHong Zhang References: 24040e6b8875SHong Zhang . MUMPS Users' Guide 24050e6b8875SHong Zhang 24060e6b8875SHong Zhang .seealso: MatGetFactor(), MatCreateTranspose(), MatMumpsGetInverse() 24070e6b8875SHong Zhang @*/ 24080e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose(Mat F,Mat spRHST) 24090e6b8875SHong Zhang { 24100e6b8875SHong Zhang PetscErrorCode ierr; 24110e6b8875SHong Zhang PetscBool flg; 24120e6b8875SHong Zhang 24130e6b8875SHong Zhang PetscFunctionBegin; 24140e6b8875SHong Zhang PetscValidType(F,1); 24150e6b8875SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 24160e6b8875SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)spRHST,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 24170e6b8875SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)spRHST),PETSC_ERR_ARG_WRONG,"Matrix spRHST must be MATAIJ matrix"); 24180e6b8875SHong Zhang 24190e6b8875SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverseTranspose_C",(Mat,Mat),(F,spRHST));CHKERRQ(ierr); 24200e6b8875SHong Zhang PetscFunctionReturn(0); 24210e6b8875SHong Zhang } 24220e6b8875SHong Zhang 2423a21f80fcSHong Zhang /*@ 2424a21f80fcSHong Zhang MatMumpsGetInfo - Get MUMPS parameter INFO() 2425a21f80fcSHong Zhang 2426a21f80fcSHong Zhang Logically Collective on Mat 2427a21f80fcSHong Zhang 2428a21f80fcSHong Zhang Input Parameters: 2429a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2430a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFO() 2431a21f80fcSHong Zhang 2432a21f80fcSHong Zhang Output Parameter: 2433a21f80fcSHong Zhang . ival - value of MUMPS INFO(icntl) 2434a21f80fcSHong Zhang 2435a21f80fcSHong Zhang Level: beginner 2436a21f80fcSHong Zhang 243796a0c994SBarry Smith References: 243896a0c994SBarry Smith . MUMPS Users' Guide 2439a21f80fcSHong Zhang 24409fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2441a21f80fcSHong Zhang @*/ 2442ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo(Mat F,PetscInt icntl,PetscInt *ival) 2443bc6112feSHong Zhang { 2444bc6112feSHong Zhang PetscErrorCode ierr; 2445bc6112feSHong Zhang 2446bc6112feSHong Zhang PetscFunctionBegin; 24472989dfd4SHong Zhang PetscValidType(F,1); 24482989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2449ca810319SHong Zhang PetscValidIntPointer(ival,3); 24502989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfo_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2451bc6112feSHong Zhang PetscFunctionReturn(0); 2452bc6112feSHong Zhang } 2453bc6112feSHong Zhang 2454a21f80fcSHong Zhang /*@ 2455a21f80fcSHong Zhang MatMumpsGetInfog - Get MUMPS parameter INFOG() 2456a21f80fcSHong Zhang 2457a21f80fcSHong Zhang Logically Collective on Mat 2458a21f80fcSHong Zhang 2459a21f80fcSHong Zhang Input Parameters: 2460a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2461a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFOG() 2462a21f80fcSHong Zhang 2463a21f80fcSHong Zhang Output Parameter: 2464a21f80fcSHong Zhang . ival - value of MUMPS INFOG(icntl) 2465a21f80fcSHong Zhang 2466a21f80fcSHong Zhang Level: beginner 2467a21f80fcSHong Zhang 246896a0c994SBarry Smith References: 246996a0c994SBarry Smith . MUMPS Users' Guide 2470a21f80fcSHong Zhang 24719fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2472a21f80fcSHong Zhang @*/ 2473ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog(Mat F,PetscInt icntl,PetscInt *ival) 2474bc6112feSHong Zhang { 2475bc6112feSHong Zhang PetscErrorCode ierr; 2476bc6112feSHong Zhang 2477bc6112feSHong Zhang PetscFunctionBegin; 24782989dfd4SHong Zhang PetscValidType(F,1); 24792989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2480ca810319SHong Zhang PetscValidIntPointer(ival,3); 24812989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfog_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2482bc6112feSHong Zhang PetscFunctionReturn(0); 2483bc6112feSHong Zhang } 2484bc6112feSHong Zhang 2485a21f80fcSHong Zhang /*@ 2486a21f80fcSHong Zhang MatMumpsGetRinfo - Get MUMPS parameter RINFO() 2487a21f80fcSHong Zhang 2488a21f80fcSHong Zhang Logically Collective on Mat 2489a21f80fcSHong Zhang 2490a21f80fcSHong Zhang Input Parameters: 2491a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2492a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFO() 2493a21f80fcSHong Zhang 2494a21f80fcSHong Zhang Output Parameter: 2495a21f80fcSHong Zhang . val - value of MUMPS RINFO(icntl) 2496a21f80fcSHong Zhang 2497a21f80fcSHong Zhang Level: beginner 2498a21f80fcSHong Zhang 249996a0c994SBarry Smith References: 250096a0c994SBarry Smith . MUMPS Users' Guide 2501a21f80fcSHong Zhang 25029fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2503a21f80fcSHong Zhang @*/ 2504ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo(Mat F,PetscInt icntl,PetscReal *val) 2505bc6112feSHong Zhang { 2506bc6112feSHong Zhang PetscErrorCode ierr; 2507bc6112feSHong Zhang 2508bc6112feSHong Zhang PetscFunctionBegin; 25092989dfd4SHong Zhang PetscValidType(F,1); 25102989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2511bc6112feSHong Zhang PetscValidRealPointer(val,3); 25122989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfo_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2513bc6112feSHong Zhang PetscFunctionReturn(0); 2514bc6112feSHong Zhang } 2515bc6112feSHong Zhang 2516a21f80fcSHong Zhang /*@ 2517a21f80fcSHong Zhang MatMumpsGetRinfog - Get MUMPS parameter RINFOG() 2518a21f80fcSHong Zhang 2519a21f80fcSHong Zhang Logically Collective on Mat 2520a21f80fcSHong Zhang 2521a21f80fcSHong Zhang Input Parameters: 2522a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2523a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFOG() 2524a21f80fcSHong Zhang 2525a21f80fcSHong Zhang Output Parameter: 2526a21f80fcSHong Zhang . val - value of MUMPS RINFOG(icntl) 2527a21f80fcSHong Zhang 2528a21f80fcSHong Zhang Level: beginner 2529a21f80fcSHong Zhang 253096a0c994SBarry Smith References: 253196a0c994SBarry Smith . MUMPS Users' Guide 2532a21f80fcSHong Zhang 25339fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2534a21f80fcSHong Zhang @*/ 2535ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog(Mat F,PetscInt icntl,PetscReal *val) 2536bc6112feSHong Zhang { 2537bc6112feSHong Zhang PetscErrorCode ierr; 2538bc6112feSHong Zhang 2539bc6112feSHong Zhang PetscFunctionBegin; 25402989dfd4SHong Zhang PetscValidType(F,1); 25412989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2542bc6112feSHong Zhang PetscValidRealPointer(val,3); 25432989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfog_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2544bc6112feSHong Zhang PetscFunctionReturn(0); 2545bc6112feSHong Zhang } 2546bc6112feSHong Zhang 254724b6179bSKris Buschelman /*MC 25482692d6eeSBarry Smith MATSOLVERMUMPS - A matrix type providing direct solvers (LU and Cholesky) for 254924b6179bSKris Buschelman distributed and sequential matrices via the external package MUMPS. 255024b6179bSKris Buschelman 255141c8de11SBarry Smith Works with MATAIJ and MATSBAIJ matrices 255224b6179bSKris Buschelman 2553c2b89b5dSBarry Smith Use ./configure --download-mumps --download-scalapack --download-parmetis --download-metis --download-ptscotch to have PETSc installed with MUMPS 2554c2b89b5dSBarry Smith 2555217d3b1eSJunchao Zhang Use ./configure --with-openmp --download-hwloc (or --with-hwloc) to enable running MUMPS in MPI+OpenMP hybrid mode and non-MUMPS in flat-MPI mode. See details below. 2556217d3b1eSJunchao Zhang 25573ca39a21SBarry Smith Use -pc_type cholesky or lu -pc_factor_mat_solver_type mumps to use this direct solver 2558c2b89b5dSBarry Smith 255924b6179bSKris Buschelman Options Database Keys: 25604422a9fcSPatrick Sanan + -mat_mumps_icntl_1 - ICNTL(1): output stream for error messages 25614422a9fcSPatrick Sanan . -mat_mumps_icntl_2 - ICNTL(2): output stream for diagnostic printing, statistics, and warning 25624422a9fcSPatrick Sanan . -mat_mumps_icntl_3 - ICNTL(3): output stream for global information, collected on the host 25634422a9fcSPatrick Sanan . -mat_mumps_icntl_4 - ICNTL(4): level of printing (0 to 4) 25644422a9fcSPatrick Sanan . -mat_mumps_icntl_6 - ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7) 25654422a9fcSPatrick Sanan . -mat_mumps_icntl_7 - ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis 25664422a9fcSPatrick Sanan . -mat_mumps_icntl_8 - ICNTL(8): scaling strategy (-2 to 8 or 77) 25674422a9fcSPatrick Sanan . -mat_mumps_icntl_10 - ICNTL(10): max num of refinements 25684422a9fcSPatrick Sanan . -mat_mumps_icntl_11 - ICNTL(11): statistics related to an error analysis (via -ksp_view) 25694422a9fcSPatrick Sanan . -mat_mumps_icntl_12 - ICNTL(12): an ordering strategy for symmetric matrices (0 to 3) 25704422a9fcSPatrick Sanan . -mat_mumps_icntl_13 - ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting 25714422a9fcSPatrick Sanan . -mat_mumps_icntl_14 - ICNTL(14): percentage increase in the estimated working space 25724422a9fcSPatrick Sanan . -mat_mumps_icntl_19 - ICNTL(19): computes the Schur complement 25734422a9fcSPatrick Sanan . -mat_mumps_icntl_22 - ICNTL(22): in-core/out-of-core factorization and solve (0 or 1) 25744422a9fcSPatrick Sanan . -mat_mumps_icntl_23 - ICNTL(23): max size of the working memory (MB) that can allocate per processor 25754422a9fcSPatrick Sanan . -mat_mumps_icntl_24 - ICNTL(24): detection of null pivot rows (0 or 1) 25764422a9fcSPatrick Sanan . -mat_mumps_icntl_25 - ICNTL(25): compute a solution of a deficient matrix and a null space basis 25774422a9fcSPatrick Sanan . -mat_mumps_icntl_26 - ICNTL(26): drives the solution phase if a Schur complement matrix 25784422a9fcSPatrick Sanan . -mat_mumps_icntl_28 - ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering 25794422a9fcSPatrick Sanan . -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis 25804422a9fcSPatrick Sanan . -mat_mumps_icntl_30 - ICNTL(30): compute user-specified set of entries in inv(A) 25814422a9fcSPatrick Sanan . -mat_mumps_icntl_31 - ICNTL(31): indicates which factors may be discarded during factorization 25824422a9fcSPatrick Sanan . -mat_mumps_icntl_33 - ICNTL(33): compute determinant 2583a0e18203SThibaut Appel . -mat_mumps_icntl_35 - ICNTL(35): level of activation of BLR (Block Low-Rank) feature 2584a0e18203SThibaut Appel . -mat_mumps_icntl_36 - ICNTL(36): controls the choice of BLR factorization variant 2585a0e18203SThibaut Appel . -mat_mumps_icntl_38 - ICNTL(38): sets the estimated compression rate of LU factors with BLR 25864422a9fcSPatrick Sanan . -mat_mumps_cntl_1 - CNTL(1): relative pivoting threshold 25874422a9fcSPatrick Sanan . -mat_mumps_cntl_2 - CNTL(2): stopping criterion of refinement 25884422a9fcSPatrick Sanan . -mat_mumps_cntl_3 - CNTL(3): absolute pivoting threshold 25894422a9fcSPatrick Sanan . -mat_mumps_cntl_4 - CNTL(4): value for static pivoting 2590217d3b1eSJunchao Zhang . -mat_mumps_cntl_5 - CNTL(5): fixation for null pivots 2591a0e18203SThibaut Appel . -mat_mumps_cntl_7 - CNTL(7): precision of the dropping parameter used during BLR factorization 2592217d3b1eSJunchao Zhang - -mat_mumps_use_omp_threads [m] - run MUMPS in MPI+OpenMP hybrid mode as if omp_set_num_threads(m) is called before calling MUMPS. 2593217d3b1eSJunchao Zhang Default might be the number of cores per CPU package (socket) as reported by hwloc and suggested by the MUMPS manual. 259424b6179bSKris Buschelman 259524b6179bSKris Buschelman Level: beginner 259624b6179bSKris Buschelman 259795452b02SPatrick Sanan Notes: 259838548759SBarry Smith MUMPS Cholesky does not handle (complex) Hermitian matrices http://mumps.enseeiht.fr/doc/userguide_5.2.1.pdf so using it will error if the matrix is Hermitian. 259938548759SBarry Smith 2600c0decd05SBarry Smith When a MUMPS factorization fails inside a KSP solve, for example with a KSP_DIVERGED_PC_FAILED, one can find the MUMPS information about the failure by calling 26019fc87aa7SBarry Smith $ KSPGetPC(ksp,&pc); 26029fc87aa7SBarry Smith $ PCFactorGetMatrix(pc,&mat); 26039fc87aa7SBarry Smith $ MatMumpsGetInfo(mat,....); 26049fc87aa7SBarry Smith $ MatMumpsGetInfog(mat,....); etc. 26059fc87aa7SBarry Smith Or you can run with -ksp_error_if_not_converged and the program will be stopped and the information printed in the error message. 26069fc87aa7SBarry Smith 26078fcaa860SBarry Smith Two modes to run MUMPS/PETSc with OpenMP 26088fcaa860SBarry Smith 26098fcaa860SBarry Smith $ Set OMP_NUM_THREADS and run with fewer MPI ranks than cores. For example, if you want to have 16 OpenMP 26108fcaa860SBarry Smith $ threads per rank, then you may use "export OMP_NUM_THREADS=16 && mpirun -n 4 ./test". 26118fcaa860SBarry Smith 26128fcaa860SBarry Smith $ -mat_mumps_use_omp_threads [m] and run your code with as many MPI ranks as the number of cores. For example, 26138fcaa860SBarry Smith $ if a compute node has 32 cores and you run on two nodes, you may use "mpirun -n 64 ./test -mat_mumps_use_omp_threads 16" 26148fcaa860SBarry Smith 26158fcaa860SBarry Smith To run MUMPS in MPI+OpenMP hybrid mode (i.e., enable multithreading in MUMPS), but still run the non-MUMPS part 2616217d3b1eSJunchao Zhang (i.e., PETSc part) of your code in the so-called flat-MPI (aka pure-MPI) mode, you need to configure PETSc with --with-openmp --download-hwloc 2617217d3b1eSJunchao Zhang (or --with-hwloc), and have an MPI that supports MPI-3.0's process shared memory (which is usually available). Since MUMPS calls BLAS 26188fcaa860SBarry Smith libraries, to really get performance, you should have multithreaded BLAS libraries such as Intel MKL, AMD ACML, Cray libSci or OpenBLAS 26198fcaa860SBarry Smith (PETSc will automatically try to utilized a threaded BLAS if --with-openmp is provided). 2620217d3b1eSJunchao Zhang 26218fcaa860SBarry Smith If you run your code through a job submission system, there are caveats in MPI rank mapping. We use MPI_Comm_split_type() to obtain MPI 2622217d3b1eSJunchao Zhang processes on each compute node. Listing the processes in rank ascending order, we split processes on a node into consecutive groups of 2623217d3b1eSJunchao Zhang size m and create a communicator called omp_comm for each group. Rank 0 in an omp_comm is called the master rank, and others in the omp_comm 2624217d3b1eSJunchao Zhang are called slave ranks (or slaves). Only master ranks are seen to MUMPS and slaves are not. We will free CPUs assigned to slaves (might be set 2625217d3b1eSJunchao Zhang by CPU binding policies in job scripts) and make the CPUs available to the master so that OMP threads spawned by MUMPS can run on the CPUs. 2626217d3b1eSJunchao Zhang In a multi-socket compute node, MPI rank mapping is an issue. Still use the above example and suppose your compute node has two sockets, 2627217d3b1eSJunchao Zhang if you interleave MPI ranks on the two sockets, in other words, even ranks are placed on socket 0, and odd ranks are on socket 1, and bind 2628217d3b1eSJunchao Zhang MPI ranks to cores, then with -mat_mumps_use_omp_threads 16, a master rank (and threads it spawns) will use half cores in socket 0, and half 2629217d3b1eSJunchao Zhang cores in socket 1, that definitely hurts locality. On the other hand, if you map MPI ranks consecutively on the two sockets, then the 2630217d3b1eSJunchao Zhang problem will not happen. Therefore, when you use -mat_mumps_use_omp_threads, you need to keep an eye on your MPI rank mapping and CPU binding. 26318fcaa860SBarry Smith For example, with the Slurm job scheduler, one can use srun --cpu-bind=verbose -m block:block to map consecutive MPI ranks to sockets and 2632217d3b1eSJunchao Zhang examine the mapping result. 2633217d3b1eSJunchao Zhang 2634217d3b1eSJunchao Zhang PETSc does not control thread binding in MUMPS. So to get best performance, one still has to set OMP_PROC_BIND and OMP_PLACES in job scripts, 2635217d3b1eSJunchao Zhang for example, export OMP_PLACES=threads and export OMP_PROC_BIND=spread. One does not need to export OMP_NUM_THREADS=m in job scripts as PETSc 2636217d3b1eSJunchao Zhang calls omp_set_num_threads(m) internally before calling MUMPS. 2637217d3b1eSJunchao Zhang 2638217d3b1eSJunchao Zhang References: 2639217d3b1eSJunchao Zhang + 1. - Heroux, Michael A., R. Brightwell, and Michael M. Wolf. "Bi-modal MPI and MPI+ threads computing on scalable multicore systems." IJHPCA (Submitted) (2011). 2640217d3b1eSJunchao Zhang - 2. - Gutierrez, Samuel K., et al. "Accommodating Thread-Level Heterogeneity in Coupled Parallel Applications." Parallel and Distributed Processing Symposium (IPDPS), 2017 IEEE International. IEEE, 2017. 2641217d3b1eSJunchao Zhang 26423ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog(), KSPGetPC(), PCGetFactor(), PCFactorGetMatrix() 264341c8de11SBarry Smith 264424b6179bSKris Buschelman M*/ 264524b6179bSKris Buschelman 2646ea799195SBarry Smith static PetscErrorCode MatFactorGetSolverType_mumps(Mat A,MatSolverType *type) 264735bd34faSBarry Smith { 264835bd34faSBarry Smith PetscFunctionBegin; 26492692d6eeSBarry Smith *type = MATSOLVERMUMPS; 265035bd34faSBarry Smith PetscFunctionReturn(0); 265135bd34faSBarry Smith } 265235bd34faSBarry Smith 2653bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI AIJ matrices */ 2654cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_aij_mumps(Mat A,MatFactorType ftype,Mat *F) 26552877fffaSHong Zhang { 26562877fffaSHong Zhang Mat B; 26572877fffaSHong Zhang PetscErrorCode ierr; 26582877fffaSHong Zhang Mat_MUMPS *mumps; 2659ace3abfcSBarry Smith PetscBool isSeqAIJ; 26602877fffaSHong Zhang 26612877fffaSHong Zhang PetscFunctionBegin; 2662eb1ec7c1SStefano Zampini #if defined(PETSC_USE_COMPLEX) 2663eb1ec7c1SStefano Zampini if (A->hermitian && !A->symmetric && ftype == MAT_FACTOR_CHOLESKY) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Hermitian CHOLESKY Factor is not supported"); 2664eb1ec7c1SStefano Zampini #endif 26652877fffaSHong Zhang /* Create the factorization matrix */ 2666a3d589ffSStefano Zampini ierr = PetscObjectBaseTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ);CHKERRQ(ierr); 2667ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 26682877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2669e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2670e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 26712877fffaSHong Zhang 2672b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 26732205254eSKarl Rupp 26742877fffaSHong Zhang B->ops->view = MatView_MUMPS; 267535bd34faSBarry Smith B->ops->getinfo = MatGetInfo_MUMPS; 26762205254eSKarl Rupp 26773ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 26785a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 26795a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2680bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2681bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2682bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2683bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2684ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2685ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2686ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2687ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 268889a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 26890e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 26906444a565SStefano Zampini 2691450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2692450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 2693d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 2694bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqaij; 2695bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpiaij; 2696746480a1SHong Zhang mumps->sym = 0; 2697dcd589f8SShri Abhyankar } else { 269867877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2699450b117fSShri Abhyankar B->factortype = MAT_FACTOR_CHOLESKY; 2700bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqsbaij; 2701bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpisbaij; 270259ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 270359ac8732SStefano Zampini mumps->sym = 2; 270459ac8732SStefano Zampini #else 27056fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 27066fdc2a6dSBarry Smith else mumps->sym = 2; 270759ac8732SStefano Zampini #endif 2708450b117fSShri Abhyankar } 27092877fffaSHong Zhang 271000c67f3bSHong Zhang /* set solvertype */ 271100c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 271200c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 271300c67f3bSHong Zhang 27142877fffaSHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2715e69c285eSBarry Smith B->data = (void*)mumps; 27162205254eSKarl Rupp 2717f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2718746480a1SHong Zhang 27192877fffaSHong Zhang *F = B; 27202877fffaSHong Zhang PetscFunctionReturn(0); 27212877fffaSHong Zhang } 27222877fffaSHong Zhang 2723bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI SBAIJ matrices */ 2724cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_sbaij_mumps(Mat A,MatFactorType ftype,Mat *F) 27252877fffaSHong Zhang { 27262877fffaSHong Zhang Mat B; 27272877fffaSHong Zhang PetscErrorCode ierr; 27282877fffaSHong Zhang Mat_MUMPS *mumps; 2729ace3abfcSBarry Smith PetscBool isSeqSBAIJ; 27302877fffaSHong Zhang 27312877fffaSHong Zhang PetscFunctionBegin; 2732eb1ec7c1SStefano Zampini #if defined(PETSC_USE_COMPLEX) 2733eb1ec7c1SStefano Zampini if (A->hermitian && !A->symmetric) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Hermitian CHOLESKY Factor is not supported"); 2734eb1ec7c1SStefano Zampini #endif 2735ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 27362877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2737e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2738e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2739e69c285eSBarry Smith 2740b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2741eb1ec7c1SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ);CHKERRQ(ierr); 2742bccb9932SShri Abhyankar if (isSeqSBAIJ) { 274316ebf90aSShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_seqsbaij_seqsbaij; 2744dcd589f8SShri Abhyankar } else { 2745bccb9932SShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_mpisbaij_mpisbaij; 2746bccb9932SShri Abhyankar } 2747bccb9932SShri Abhyankar 274867877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2749bccb9932SShri Abhyankar B->ops->view = MatView_MUMPS; 2750722b6324SPierre Jolivet B->ops->getinfo = MatGetInfo_MUMPS; 27512205254eSKarl Rupp 27523ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 27535a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 27545a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2755b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2756b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2757b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2758b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2759ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2760ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2761ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2762ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 276389a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2764eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 27652205254eSKarl Rupp 2766f4762488SHong Zhang B->factortype = MAT_FACTOR_CHOLESKY; 276759ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 276859ac8732SStefano Zampini mumps->sym = 2; 276959ac8732SStefano Zampini #else 27706fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 27716fdc2a6dSBarry Smith else mumps->sym = 2; 277259ac8732SStefano Zampini #endif 2773a214ac2aSShri Abhyankar 277400c67f3bSHong Zhang /* set solvertype */ 277500c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 277600c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 277700c67f3bSHong Zhang 2778f3c0ef26SHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2779e69c285eSBarry Smith B->data = (void*)mumps; 27802205254eSKarl Rupp 2781f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2782746480a1SHong Zhang 27832877fffaSHong Zhang *F = B; 27842877fffaSHong Zhang PetscFunctionReturn(0); 27852877fffaSHong Zhang } 278697969023SHong Zhang 2787cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_baij_mumps(Mat A,MatFactorType ftype,Mat *F) 278867877ebaSShri Abhyankar { 278967877ebaSShri Abhyankar Mat B; 279067877ebaSShri Abhyankar PetscErrorCode ierr; 279167877ebaSShri Abhyankar Mat_MUMPS *mumps; 2792ace3abfcSBarry Smith PetscBool isSeqBAIJ; 279367877ebaSShri Abhyankar 279467877ebaSShri Abhyankar PetscFunctionBegin; 279567877ebaSShri Abhyankar /* Create the factorization matrix */ 2796251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&isSeqBAIJ);CHKERRQ(ierr); 2797ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 279867877ebaSShri Abhyankar ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2799e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2800e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2801450b117fSShri Abhyankar 2802b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2803450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2804450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_BAIJMUMPS; 2805450b117fSShri Abhyankar B->factortype = MAT_FACTOR_LU; 2806bccb9932SShri Abhyankar if (isSeqBAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqbaij_seqaij; 2807bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpibaij_mpiaij; 2808746480a1SHong Zhang mumps->sym = 0; 2809f23aa3ddSBarry Smith } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc BAIJ matrices with MUMPS Cholesky, use SBAIJ or AIJ matrix instead\n"); 2810bccb9932SShri Abhyankar 2811450b117fSShri Abhyankar B->ops->view = MatView_MUMPS; 2812722b6324SPierre Jolivet B->ops->getinfo = MatGetInfo_MUMPS; 28132205254eSKarl Rupp 28143ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 28155a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 28165a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2817bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2818bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2819bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2820bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2821ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2822ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2823ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2824ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 282589a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2826eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 2827450b117fSShri Abhyankar 282800c67f3bSHong Zhang /* set solvertype */ 282900c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 283000c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 283100c67f3bSHong Zhang 28327ee00b23SStefano Zampini B->ops->destroy = MatDestroy_MUMPS; 28337ee00b23SStefano Zampini B->data = (void*)mumps; 28347ee00b23SStefano Zampini 28357ee00b23SStefano Zampini ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 28367ee00b23SStefano Zampini 28377ee00b23SStefano Zampini *F = B; 28387ee00b23SStefano Zampini PetscFunctionReturn(0); 28397ee00b23SStefano Zampini } 28407ee00b23SStefano Zampini 28417ee00b23SStefano Zampini /* MatGetFactor for Seq and MPI SELL matrices */ 28427ee00b23SStefano Zampini static PetscErrorCode MatGetFactor_sell_mumps(Mat A,MatFactorType ftype,Mat *F) 28437ee00b23SStefano Zampini { 28447ee00b23SStefano Zampini Mat B; 28457ee00b23SStefano Zampini PetscErrorCode ierr; 28467ee00b23SStefano Zampini Mat_MUMPS *mumps; 28477ee00b23SStefano Zampini PetscBool isSeqSELL; 28487ee00b23SStefano Zampini 28497ee00b23SStefano Zampini PetscFunctionBegin; 28507ee00b23SStefano Zampini /* Create the factorization matrix */ 28517ee00b23SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSELL,&isSeqSELL);CHKERRQ(ierr); 28527ee00b23SStefano Zampini ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 28537ee00b23SStefano Zampini ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 28547ee00b23SStefano Zampini ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 28557ee00b23SStefano Zampini ierr = MatSetUp(B);CHKERRQ(ierr); 28567ee00b23SStefano Zampini 28577ee00b23SStefano Zampini ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 28587ee00b23SStefano Zampini 28597ee00b23SStefano Zampini B->ops->view = MatView_MUMPS; 28607ee00b23SStefano Zampini B->ops->getinfo = MatGetInfo_MUMPS; 28617ee00b23SStefano Zampini 28627ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 28637ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 28647ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 28657ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 28667ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 28677ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 28687ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 28697ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 28707ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 28717ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 28727ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 28737ee00b23SStefano Zampini 28747ee00b23SStefano Zampini if (ftype == MAT_FACTOR_LU) { 28757ee00b23SStefano Zampini B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 28767ee00b23SStefano Zampini B->factortype = MAT_FACTOR_LU; 28777ee00b23SStefano Zampini if (isSeqSELL) mumps->ConvertToTriples = MatConvertToTriples_seqsell_seqaij; 28787ee00b23SStefano Zampini else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 28797ee00b23SStefano Zampini mumps->sym = 0; 28807ee00b23SStefano Zampini } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 28817ee00b23SStefano Zampini 28827ee00b23SStefano Zampini /* set solvertype */ 28837ee00b23SStefano Zampini ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 28847ee00b23SStefano Zampini ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 28857ee00b23SStefano Zampini 2886450b117fSShri Abhyankar B->ops->destroy = MatDestroy_MUMPS; 2887e69c285eSBarry Smith B->data = (void*)mumps; 28882205254eSKarl Rupp 2889f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2890746480a1SHong Zhang 2891450b117fSShri Abhyankar *F = B; 2892450b117fSShri Abhyankar PetscFunctionReturn(0); 2893450b117fSShri Abhyankar } 289442c9c57cSBarry Smith 28953ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_MUMPS(void) 289642c9c57cSBarry Smith { 289742c9c57cSBarry Smith PetscErrorCode ierr; 289842c9c57cSBarry Smith 289942c9c57cSBarry Smith PetscFunctionBegin; 29003ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 29013ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 29023ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 29033ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 29043ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPISBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 29053ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 29063ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 29073ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 29083ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 29093ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 29107ee00b23SStefano Zampini ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSELL,MAT_FACTOR_LU,MatGetFactor_sell_mumps);CHKERRQ(ierr); 291142c9c57cSBarry Smith PetscFunctionReturn(0); 291242c9c57cSBarry Smith } 291342c9c57cSBarry Smith 2914