11c2a3de1SBarry Smith 2397b6df1SKris Buschelman /* 3c2b5dc30SHong Zhang Provides an interface to the MUMPS sparse solver 4397b6df1SKris Buschelman */ 551d5961aSHong Zhang 6c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> /*I "petscmat.h" I*/ 7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h> 87ee00b23SStefano Zampini #include <../src/mat/impls/sell/mpi/mpisell.h> 9397b6df1SKris Buschelman 10397b6df1SKris Buschelman EXTERN_C_BEGIN 11397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 122907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 132907cef9SHong Zhang #include <cmumps_c.h> 142907cef9SHong Zhang #else 15c6db04a5SJed Brown #include <zmumps_c.h> 162907cef9SHong Zhang #endif 172907cef9SHong Zhang #else 182907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 192907cef9SHong Zhang #include <smumps_c.h> 20397b6df1SKris Buschelman #else 21c6db04a5SJed Brown #include <dmumps_c.h> 22397b6df1SKris Buschelman #endif 232907cef9SHong Zhang #endif 24397b6df1SKris Buschelman EXTERN_C_END 25397b6df1SKris Buschelman #define JOB_INIT -1 263d472b54SHong Zhang #define JOB_FACTSYMBOLIC 1 273d472b54SHong Zhang #define JOB_FACTNUMERIC 2 283d472b54SHong Zhang #define JOB_SOLVE 3 29397b6df1SKris Buschelman #define JOB_END -2 303d472b54SHong Zhang 312907cef9SHong Zhang /* calls to MUMPS */ 322907cef9SHong Zhang #if defined(PETSC_USE_COMPLEX) 332907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 343ab56b82SJunchao Zhang #define MUMPS_c cmumps_c 352907cef9SHong Zhang #else 363ab56b82SJunchao Zhang #define MUMPS_c zmumps_c 372907cef9SHong Zhang #endif 382907cef9SHong Zhang #else 392907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 403ab56b82SJunchao Zhang #define MUMPS_c smumps_c 412907cef9SHong Zhang #else 423ab56b82SJunchao Zhang #define MUMPS_c dmumps_c 432907cef9SHong Zhang #endif 442907cef9SHong Zhang #endif 452907cef9SHong Zhang 46217d3b1eSJunchao Zhang /* if using PETSc OpenMP support, we only call MUMPS on master ranks. Before/after the call, we change/restore CPUs the master ranks can run on */ 473ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 483ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 493ab56b82SJunchao Zhang do { \ 503ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { \ 513ab56b82SJunchao Zhang if (mumps->is_omp_master) { \ 523ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterBegin(mumps->omp_ctrl);CHKERRQ(ierr); \ 533ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 543ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterEnd(mumps->omp_ctrl);CHKERRQ(ierr); \ 553ab56b82SJunchao Zhang } \ 563ab56b82SJunchao Zhang ierr = PetscOmpCtrlBarrier(mumps->omp_ctrl);CHKERRQ(ierr); \ 573ab56b82SJunchao Zhang } else { \ 583ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 593ab56b82SJunchao Zhang } \ 603ab56b82SJunchao Zhang } while(0) 613ab56b82SJunchao Zhang #else 623ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 633ab56b82SJunchao Zhang do { MUMPS_c(&mumps->id); } while (0) 643ab56b82SJunchao Zhang #endif 653ab56b82SJunchao Zhang 66940cd9d6SSatish Balay /* declare MumpsScalar */ 67940cd9d6SSatish Balay #if defined(PETSC_USE_COMPLEX) 68940cd9d6SSatish Balay #if defined(PETSC_USE_REAL_SINGLE) 69940cd9d6SSatish Balay #define MumpsScalar mumps_complex 70940cd9d6SSatish Balay #else 71940cd9d6SSatish Balay #define MumpsScalar mumps_double_complex 72940cd9d6SSatish Balay #endif 73940cd9d6SSatish Balay #else 74940cd9d6SSatish Balay #define MumpsScalar PetscScalar 75940cd9d6SSatish Balay #endif 763d472b54SHong Zhang 77397b6df1SKris Buschelman /* macros s.t. indices match MUMPS documentation */ 78397b6df1SKris Buschelman #define ICNTL(I) icntl[(I)-1] 79397b6df1SKris Buschelman #define CNTL(I) cntl[(I)-1] 80397b6df1SKris Buschelman #define INFOG(I) infog[(I)-1] 81a7aca84bSHong Zhang #define INFO(I) info[(I)-1] 82397b6df1SKris Buschelman #define RINFOG(I) rinfog[(I)-1] 83adc1d99fSHong Zhang #define RINFO(I) rinfo[(I)-1] 84397b6df1SKris Buschelman 85397b6df1SKris Buschelman typedef struct { 86397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 872907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 882907cef9SHong Zhang CMUMPS_STRUC_C id; 892907cef9SHong Zhang #else 90397b6df1SKris Buschelman ZMUMPS_STRUC_C id; 912907cef9SHong Zhang #endif 922907cef9SHong Zhang #else 932907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 942907cef9SHong Zhang SMUMPS_STRUC_C id; 95397b6df1SKris Buschelman #else 96397b6df1SKris Buschelman DMUMPS_STRUC_C id; 97397b6df1SKris Buschelman #endif 982907cef9SHong Zhang #endif 992907cef9SHong Zhang 100397b6df1SKris Buschelman MatStructure matstruc; 1012d4298aeSJunchao Zhang PetscMPIInt myid,petsc_size; 102a5e57a09SHong Zhang PetscInt *irn,*jcn,nz,sym; 103397b6df1SKris Buschelman PetscScalar *val; 1042d4298aeSJunchao Zhang MPI_Comm mumps_comm; 105a5e57a09SHong Zhang PetscInt ICNTL9_pre; /* check if ICNTL(9) is changed from previous MatSolve */ 106801fbe65SHong Zhang VecScatter scat_rhs, scat_sol; /* used by MatSolve() */ 107801fbe65SHong Zhang Vec b_seq,x_seq; 108b34f08ffSHong Zhang PetscInt ninfo,*info; /* display INFO */ 109b5fa320bSStefano Zampini PetscInt sizeredrhs; 11059ac8732SStefano Zampini PetscScalar *schur_sol; 11159ac8732SStefano Zampini PetscInt schur_sizesol; 1122205254eSKarl Rupp 1133ab56b82SJunchao Zhang PetscBool use_petsc_omp_support; 1143ab56b82SJunchao Zhang PetscOmpCtrl omp_ctrl; /* an OpenMP controler that blocked processes will release their CPU (MPI_Barrier does not have this guarantee) */ 1153ab56b82SJunchao Zhang MPI_Comm petsc_comm,omp_comm; /* petsc_comm is petsc matrix's comm */ 1163ab56b82SJunchao Zhang PetscMPIInt mpinz; /* on master rank, nz = sum(mpinz) over omp_comm; on other ranks, mpinz = nz*/ 1173ab56b82SJunchao Zhang PetscMPIInt omp_comm_size; 1183ab56b82SJunchao Zhang PetscBool is_omp_master; /* is this rank the master of omp_comm */ 1193ab56b82SJunchao Zhang PetscMPIInt *recvcount,*displs; 1203ab56b82SJunchao Zhang 121bccb9932SShri Abhyankar PetscErrorCode (*ConvertToTriples)(Mat, int, MatReuse, int*, int**, int**, PetscScalar**); 122f0c56d0fSKris Buschelman } Mat_MUMPS; 123f0c56d0fSKris Buschelman 12409573ac7SBarry Smith extern PetscErrorCode MatDuplicate_MUMPS(Mat,MatDuplicateOption,Mat*); 125b24902e0SBarry Smith 12659ac8732SStefano Zampini static PetscErrorCode MatMumpsResetSchur_Private(Mat_MUMPS* mumps) 127b5fa320bSStefano Zampini { 128b5fa320bSStefano Zampini PetscErrorCode ierr; 129b5fa320bSStefano Zampini 130b5fa320bSStefano Zampini PetscFunctionBegin; 13159ac8732SStefano Zampini ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr); 13259ac8732SStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 13359ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 13459ac8732SStefano Zampini mumps->id.size_schur = 0; 135b3cb21ddSStefano Zampini mumps->id.schur_lld = 0; 13659ac8732SStefano Zampini mumps->id.ICNTL(19) = 0; 13759ac8732SStefano Zampini PetscFunctionReturn(0); 13859ac8732SStefano Zampini } 13959ac8732SStefano Zampini 140b3cb21ddSStefano Zampini /* solve with rhs in mumps->id.redrhs and return in the same location */ 141b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsSolveSchur_Private(Mat F) 14259ac8732SStefano Zampini { 143b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 144b3cb21ddSStefano Zampini Mat S,B,X; 145b3cb21ddSStefano Zampini MatFactorSchurStatus schurstatus; 146b3cb21ddSStefano Zampini PetscInt sizesol; 14759ac8732SStefano Zampini PetscErrorCode ierr; 14859ac8732SStefano Zampini 14959ac8732SStefano Zampini PetscFunctionBegin; 150b3cb21ddSStefano Zampini ierr = MatFactorFactorizeSchurComplement(F);CHKERRQ(ierr); 151b3cb21ddSStefano Zampini ierr = MatFactorGetSchurComplement(F,&S,&schurstatus);CHKERRQ(ierr); 152b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&B);CHKERRQ(ierr); 153b3cb21ddSStefano Zampini switch (schurstatus) { 154b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_FACTORED: 155b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&X);CHKERRQ(ierr); 156b3cb21ddSStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 157b3cb21ddSStefano Zampini ierr = MatMatSolveTranspose(S,B,X);CHKERRQ(ierr); 15859ac8732SStefano Zampini } else { 159b3cb21ddSStefano Zampini ierr = MatMatSolve(S,B,X);CHKERRQ(ierr); 16059ac8732SStefano Zampini } 161b3cb21ddSStefano Zampini break; 162b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_INVERTED: 163b3cb21ddSStefano Zampini sizesol = mumps->id.nrhs*mumps->id.size_schur; 16459ac8732SStefano Zampini if (!mumps->schur_sol || sizesol > mumps->schur_sizesol) { 16559ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 16659ac8732SStefano Zampini ierr = PetscMalloc1(sizesol,&mumps->schur_sol);CHKERRQ(ierr); 16759ac8732SStefano Zampini mumps->schur_sizesol = sizesol; 168b5fa320bSStefano Zampini } 169b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,mumps->schur_sol,&X);CHKERRQ(ierr); 17059ac8732SStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 171b3cb21ddSStefano Zampini ierr = MatTransposeMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 172b5fa320bSStefano Zampini } else { 173b3cb21ddSStefano Zampini ierr = MatMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 174b5fa320bSStefano Zampini } 175b3cb21ddSStefano Zampini ierr = MatCopy(X,B,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 176b3cb21ddSStefano Zampini break; 177b3cb21ddSStefano Zampini default: 178b3cb21ddSStefano Zampini SETERRQ1(PetscObjectComm((PetscObject)F),PETSC_ERR_SUP,"Unhandled MatFactorSchurStatus %D",F->schur_status); 179b3cb21ddSStefano Zampini break; 18059ac8732SStefano Zampini } 181b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,&S,schurstatus);CHKERRQ(ierr); 182b3cb21ddSStefano Zampini ierr = MatDestroy(&B);CHKERRQ(ierr); 183b3cb21ddSStefano Zampini ierr = MatDestroy(&X);CHKERRQ(ierr); 184b5fa320bSStefano Zampini PetscFunctionReturn(0); 185b5fa320bSStefano Zampini } 186b5fa320bSStefano Zampini 187b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsHandleSchur_Private(Mat F, PetscBool expansion) 188b5fa320bSStefano Zampini { 189b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 190b5fa320bSStefano Zampini PetscErrorCode ierr; 191b5fa320bSStefano Zampini 192b5fa320bSStefano Zampini PetscFunctionBegin; 193b5fa320bSStefano Zampini if (!mumps->id.ICNTL(19)) { /* do nothing when Schur complement has not been computed */ 194b5fa320bSStefano Zampini PetscFunctionReturn(0); 195b5fa320bSStefano Zampini } 196b8f61ee1SStefano Zampini if (!expansion) { /* prepare for the condensation step */ 197b5fa320bSStefano Zampini PetscInt sizeredrhs = mumps->id.nrhs*mumps->id.size_schur; 198b5fa320bSStefano Zampini /* allocate MUMPS internal array to store reduced right-hand sides */ 199b5fa320bSStefano Zampini if (!mumps->id.redrhs || sizeredrhs > mumps->sizeredrhs) { 200b5fa320bSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 201b5fa320bSStefano Zampini mumps->id.lredrhs = mumps->id.size_schur; 202b5fa320bSStefano Zampini ierr = PetscMalloc1(mumps->id.nrhs*mumps->id.lredrhs,&mumps->id.redrhs);CHKERRQ(ierr); 203b5fa320bSStefano Zampini mumps->sizeredrhs = mumps->id.nrhs*mumps->id.lredrhs; 204b5fa320bSStefano Zampini } 205b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 1; /* condensation phase */ 206b5fa320bSStefano Zampini } else { /* prepare for the expansion step */ 207b8f61ee1SStefano Zampini /* solve Schur complement (this has to be done by the MUMPS user, so basically us) */ 208b3cb21ddSStefano Zampini ierr = MatMumpsSolveSchur_Private(F);CHKERRQ(ierr); 209b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 2; /* expansion phase */ 2103ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 211b5fa320bSStefano Zampini if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 212b5fa320bSStefano Zampini /* restore defaults */ 213b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 214d3d598ffSStefano Zampini /* free MUMPS internal array for redrhs if we have solved for multiple rhs in order to save memory space */ 215d3d598ffSStefano Zampini if (mumps->id.nrhs > 1) { 216d3d598ffSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 217d3d598ffSStefano Zampini mumps->id.lredrhs = 0; 218d3d598ffSStefano Zampini mumps->sizeredrhs = 0; 219d3d598ffSStefano Zampini } 220b5fa320bSStefano Zampini } 221b5fa320bSStefano Zampini PetscFunctionReturn(0); 222b5fa320bSStefano Zampini } 223b5fa320bSStefano Zampini 224397b6df1SKris Buschelman /* 225d341cd04SHong Zhang MatConvertToTriples_A_B - convert Petsc matrix to triples: row[nz], col[nz], val[nz] 226d341cd04SHong Zhang 227397b6df1SKris Buschelman input: 22867877ebaSShri Abhyankar A - matrix in aij,baij or sbaij (bs=1) format 229397b6df1SKris Buschelman shift - 0: C style output triple; 1: Fortran style output triple. 230bccb9932SShri Abhyankar reuse - MAT_INITIAL_MATRIX: spaces are allocated and values are set for the triple 231bccb9932SShri Abhyankar MAT_REUSE_MATRIX: only the values in v array are updated 232397b6df1SKris Buschelman output: 233397b6df1SKris Buschelman nnz - dim of r, c, and v (number of local nonzero entries of A) 234397b6df1SKris Buschelman r, c, v - row and col index, matrix values (matrix triples) 235eb9baa12SBarry Smith 236eb9baa12SBarry Smith The returned values r, c, and sometimes v are obtained in a single PetscMalloc(). Then in MatDestroy_MUMPS() it is 2377ee00b23SStefano Zampini freed with PetscFree(mumps->irn); This is not ideal code, the fact that v is ONLY sometimes part of mumps->irn means 238eb9baa12SBarry Smith that the PetscMalloc() cannot easily be replaced with a PetscMalloc3(). 239eb9baa12SBarry Smith 240397b6df1SKris Buschelman */ 24116ebf90aSShri Abhyankar 242bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 243b24902e0SBarry Smith { 244185f6596SHong Zhang const PetscInt *ai,*aj,*ajj,M=A->rmap->n; 24567877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 246dfbe8321SBarry Smith PetscErrorCode ierr; 247c1490034SHong Zhang PetscInt *row,*col; 24816ebf90aSShri Abhyankar Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 249397b6df1SKris Buschelman 250397b6df1SKris Buschelman PetscFunctionBegin; 25116ebf90aSShri Abhyankar *v=aa->a; 252bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 2532205254eSKarl Rupp nz = aa->nz; 2542205254eSKarl Rupp ai = aa->i; 2552205254eSKarl Rupp aj = aa->j; 25616ebf90aSShri Abhyankar *nnz = nz; 257785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 258185f6596SHong Zhang col = row + nz; 259185f6596SHong Zhang 26016ebf90aSShri Abhyankar nz = 0; 26116ebf90aSShri Abhyankar for (i=0; i<M; i++) { 26216ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 26367877ebaSShri Abhyankar ajj = aj + ai[i]; 26467877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 26567877ebaSShri Abhyankar row[nz] = i+shift; col[nz++] = ajj[j] + shift; 26616ebf90aSShri Abhyankar } 26716ebf90aSShri Abhyankar } 26816ebf90aSShri Abhyankar *r = row; *c = col; 26916ebf90aSShri Abhyankar } 27016ebf90aSShri Abhyankar PetscFunctionReturn(0); 27116ebf90aSShri Abhyankar } 272397b6df1SKris Buschelman 2737ee00b23SStefano Zampini PetscErrorCode MatConvertToTriples_seqsell_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 2747ee00b23SStefano Zampini { 2757ee00b23SStefano Zampini Mat_SeqSELL *a=(Mat_SeqSELL*)A->data; 2767ee00b23SStefano Zampini PetscInt *ptr; 2777ee00b23SStefano Zampini 2787ee00b23SStefano Zampini PetscFunctionBegin; 2797ee00b23SStefano Zampini *v = a->val; 2807ee00b23SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 2817ee00b23SStefano Zampini PetscInt nz,i,j,row; 2827ee00b23SStefano Zampini PetscErrorCode ierr; 2837ee00b23SStefano Zampini 2847ee00b23SStefano Zampini nz = a->sliidx[a->totalslices]; 2857ee00b23SStefano Zampini *nnz = nz; 2867ee00b23SStefano Zampini ierr = PetscMalloc1(2*nz, &ptr);CHKERRQ(ierr); 2877ee00b23SStefano Zampini *r = ptr; 2887ee00b23SStefano Zampini *c = ptr + nz; 2897ee00b23SStefano Zampini 2907ee00b23SStefano Zampini for (i=0; i<a->totalslices; i++) { 2917ee00b23SStefano Zampini for (j=a->sliidx[i],row=0; j<a->sliidx[i+1]; j++,row=((row+1)&0x07)) { 2927ee00b23SStefano Zampini *ptr++ = 8*i + row + shift; 2937ee00b23SStefano Zampini } 2947ee00b23SStefano Zampini } 2957ee00b23SStefano Zampini for (i=0;i<nz;i++) *ptr++ = a->colidx[i] + shift; 2967ee00b23SStefano Zampini } 2977ee00b23SStefano Zampini PetscFunctionReturn(0); 2987ee00b23SStefano Zampini } 2997ee00b23SStefano Zampini 300bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqbaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 30167877ebaSShri Abhyankar { 30267877ebaSShri Abhyankar Mat_SeqBAIJ *aa=(Mat_SeqBAIJ*)A->data; 30333d57670SJed Brown const PetscInt *ai,*aj,*ajj,bs2 = aa->bs2; 30433d57670SJed Brown PetscInt bs,M,nz,idx=0,rnz,i,j,k,m; 30567877ebaSShri Abhyankar PetscErrorCode ierr; 30667877ebaSShri Abhyankar PetscInt *row,*col; 30767877ebaSShri Abhyankar 30867877ebaSShri Abhyankar PetscFunctionBegin; 30933d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 31033d57670SJed Brown M = A->rmap->N/bs; 311cf3759fdSShri Abhyankar *v = aa->a; 312bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 313cf3759fdSShri Abhyankar ai = aa->i; aj = aa->j; 31467877ebaSShri Abhyankar nz = bs2*aa->nz; 31567877ebaSShri Abhyankar *nnz = nz; 316785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 317185f6596SHong Zhang col = row + nz; 318185f6596SHong Zhang 31967877ebaSShri Abhyankar for (i=0; i<M; i++) { 32067877ebaSShri Abhyankar ajj = aj + ai[i]; 32167877ebaSShri Abhyankar rnz = ai[i+1] - ai[i]; 32267877ebaSShri Abhyankar for (k=0; k<rnz; k++) { 32367877ebaSShri Abhyankar for (j=0; j<bs; j++) { 32467877ebaSShri Abhyankar for (m=0; m<bs; m++) { 32567877ebaSShri Abhyankar row[idx] = i*bs + m + shift; 326cf3759fdSShri Abhyankar col[idx++] = bs*(ajj[k]) + j + shift; 32767877ebaSShri Abhyankar } 32867877ebaSShri Abhyankar } 32967877ebaSShri Abhyankar } 33067877ebaSShri Abhyankar } 331cf3759fdSShri Abhyankar *r = row; *c = col; 33267877ebaSShri Abhyankar } 33367877ebaSShri Abhyankar PetscFunctionReturn(0); 33467877ebaSShri Abhyankar } 33567877ebaSShri Abhyankar 336bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqsbaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 33716ebf90aSShri Abhyankar { 33867877ebaSShri Abhyankar const PetscInt *ai, *aj,*ajj,M=A->rmap->n; 33967877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 34016ebf90aSShri Abhyankar PetscErrorCode ierr; 34116ebf90aSShri Abhyankar PetscInt *row,*col; 34216ebf90aSShri Abhyankar Mat_SeqSBAIJ *aa=(Mat_SeqSBAIJ*)A->data; 34316ebf90aSShri Abhyankar 34416ebf90aSShri Abhyankar PetscFunctionBegin; 345882afa5aSHong Zhang *v = aa->a; 346bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 3472205254eSKarl Rupp nz = aa->nz; 3482205254eSKarl Rupp ai = aa->i; 3492205254eSKarl Rupp aj = aa->j; 3502205254eSKarl Rupp *v = aa->a; 35116ebf90aSShri Abhyankar *nnz = nz; 352785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 353185f6596SHong Zhang col = row + nz; 354185f6596SHong Zhang 35516ebf90aSShri Abhyankar nz = 0; 35616ebf90aSShri Abhyankar for (i=0; i<M; i++) { 35716ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 35867877ebaSShri Abhyankar ajj = aj + ai[i]; 35967877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 36067877ebaSShri Abhyankar row[nz] = i+shift; col[nz++] = ajj[j] + shift; 36116ebf90aSShri Abhyankar } 36216ebf90aSShri Abhyankar } 36316ebf90aSShri Abhyankar *r = row; *c = col; 36416ebf90aSShri Abhyankar } 36516ebf90aSShri Abhyankar PetscFunctionReturn(0); 36616ebf90aSShri Abhyankar } 36716ebf90aSShri Abhyankar 368bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 36916ebf90aSShri Abhyankar { 37067877ebaSShri Abhyankar const PetscInt *ai,*aj,*ajj,*adiag,M=A->rmap->n; 37167877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 37267877ebaSShri Abhyankar const PetscScalar *av,*v1; 37316ebf90aSShri Abhyankar PetscScalar *val; 37416ebf90aSShri Abhyankar PetscErrorCode ierr; 37516ebf90aSShri Abhyankar PetscInt *row,*col; 376829b1710SHong Zhang Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 37729b521d4Sstefano_zampini PetscBool missing; 37816ebf90aSShri Abhyankar 37916ebf90aSShri Abhyankar PetscFunctionBegin; 38016ebf90aSShri Abhyankar ai = aa->i; aj = aa->j; av = aa->a; 38116ebf90aSShri Abhyankar adiag = aa->diag; 38229b521d4Sstefano_zampini ierr = MatMissingDiagonal_SeqAIJ(A,&missing,&i);CHKERRQ(ierr); 383bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 3847ee00b23SStefano Zampini /* count nz in the upper triangular part of A */ 385829b1710SHong Zhang nz = 0; 38629b521d4Sstefano_zampini if (missing) { 38729b521d4Sstefano_zampini for (i=0; i<M; i++) { 38829b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 38929b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 39029b521d4Sstefano_zampini if (aj[j] < i) continue; 39129b521d4Sstefano_zampini nz++; 39229b521d4Sstefano_zampini } 39329b521d4Sstefano_zampini } else { 39429b521d4Sstefano_zampini nz += ai[i+1] - adiag[i]; 39529b521d4Sstefano_zampini } 39629b521d4Sstefano_zampini } 39729b521d4Sstefano_zampini } else { 398829b1710SHong Zhang for (i=0; i<M; i++) nz += ai[i+1] - adiag[i]; 39929b521d4Sstefano_zampini } 40016ebf90aSShri Abhyankar *nnz = nz; 401829b1710SHong Zhang 402185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 403185f6596SHong Zhang col = row + nz; 404185f6596SHong Zhang val = (PetscScalar*)(col + nz); 405185f6596SHong Zhang 40616ebf90aSShri Abhyankar nz = 0; 40729b521d4Sstefano_zampini if (missing) { 40829b521d4Sstefano_zampini for (i=0; i<M; i++) { 40929b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 41029b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 41129b521d4Sstefano_zampini if (aj[j] < i) continue; 41229b521d4Sstefano_zampini row[nz] = i+shift; 41329b521d4Sstefano_zampini col[nz] = aj[j]+shift; 41429b521d4Sstefano_zampini val[nz] = av[j]; 41529b521d4Sstefano_zampini nz++; 41629b521d4Sstefano_zampini } 41729b521d4Sstefano_zampini } else { 41829b521d4Sstefano_zampini rnz = ai[i+1] - adiag[i]; 41929b521d4Sstefano_zampini ajj = aj + adiag[i]; 42029b521d4Sstefano_zampini v1 = av + adiag[i]; 42129b521d4Sstefano_zampini for (j=0; j<rnz; j++) { 42229b521d4Sstefano_zampini row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 42329b521d4Sstefano_zampini } 42429b521d4Sstefano_zampini } 42529b521d4Sstefano_zampini } 42629b521d4Sstefano_zampini } else { 42716ebf90aSShri Abhyankar for (i=0; i<M; i++) { 42816ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 42967877ebaSShri Abhyankar ajj = aj + adiag[i]; 430cf3759fdSShri Abhyankar v1 = av + adiag[i]; 43167877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 43267877ebaSShri Abhyankar row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 43316ebf90aSShri Abhyankar } 43416ebf90aSShri Abhyankar } 43529b521d4Sstefano_zampini } 43616ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 437397b6df1SKris Buschelman } else { 43816ebf90aSShri Abhyankar nz = 0; val = *v; 43929b521d4Sstefano_zampini if (missing) { 44016ebf90aSShri Abhyankar for (i=0; i <M; i++) { 44129b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 44229b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 44329b521d4Sstefano_zampini if (aj[j] < i) continue; 44429b521d4Sstefano_zampini val[nz++] = av[j]; 44529b521d4Sstefano_zampini } 44629b521d4Sstefano_zampini } else { 44716ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 44867877ebaSShri Abhyankar v1 = av + adiag[i]; 44967877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 45067877ebaSShri Abhyankar val[nz++] = v1[j]; 45116ebf90aSShri Abhyankar } 45216ebf90aSShri Abhyankar } 45316ebf90aSShri Abhyankar } 45429b521d4Sstefano_zampini } else { 45516ebf90aSShri Abhyankar for (i=0; i <M; i++) { 45616ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 45716ebf90aSShri Abhyankar v1 = av + adiag[i]; 45816ebf90aSShri Abhyankar for (j=0; j<rnz; j++) { 45916ebf90aSShri Abhyankar val[nz++] = v1[j]; 46016ebf90aSShri Abhyankar } 46116ebf90aSShri Abhyankar } 46216ebf90aSShri Abhyankar } 46329b521d4Sstefano_zampini } 46416ebf90aSShri Abhyankar PetscFunctionReturn(0); 46516ebf90aSShri Abhyankar } 46616ebf90aSShri Abhyankar 467bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpisbaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 46816ebf90aSShri Abhyankar { 46916ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 47016ebf90aSShri Abhyankar PetscErrorCode ierr; 47116ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 47216ebf90aSShri Abhyankar PetscInt *row,*col; 47316ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 47416ebf90aSShri Abhyankar PetscScalar *val; 475397b6df1SKris Buschelman Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)A->data; 476397b6df1SKris Buschelman Mat_SeqSBAIJ *aa = (Mat_SeqSBAIJ*)(mat->A)->data; 477397b6df1SKris Buschelman Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 47816ebf90aSShri Abhyankar 47916ebf90aSShri Abhyankar PetscFunctionBegin; 480d0f46423SBarry Smith ai=aa->i; aj=aa->j; bi=bb->i; bj=bb->j; rstart= A->rmap->rstart; 481397b6df1SKris Buschelman av=aa->a; bv=bb->a; 482397b6df1SKris Buschelman 4832205254eSKarl Rupp garray = mat->garray; 4842205254eSKarl Rupp 485bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 48616ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 48716ebf90aSShri Abhyankar *nnz = nz; 488185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 489185f6596SHong Zhang col = row + nz; 490185f6596SHong Zhang val = (PetscScalar*)(col + nz); 491185f6596SHong Zhang 492397b6df1SKris Buschelman *r = row; *c = col; *v = val; 493397b6df1SKris Buschelman } else { 494397b6df1SKris Buschelman row = *r; col = *c; val = *v; 495397b6df1SKris Buschelman } 496397b6df1SKris Buschelman 497028e57e8SHong Zhang jj = 0; irow = rstart; 498397b6df1SKris Buschelman for (i=0; i<m; i++) { 499397b6df1SKris Buschelman ajj = aj + ai[i]; /* ptr to the beginning of this row */ 500397b6df1SKris Buschelman countA = ai[i+1] - ai[i]; 501397b6df1SKris Buschelman countB = bi[i+1] - bi[i]; 502397b6df1SKris Buschelman bjj = bj + bi[i]; 50316ebf90aSShri Abhyankar v1 = av + ai[i]; 50416ebf90aSShri Abhyankar v2 = bv + bi[i]; 505397b6df1SKris Buschelman 506397b6df1SKris Buschelman /* A-part */ 507397b6df1SKris Buschelman for (j=0; j<countA; j++) { 508bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 509397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 510397b6df1SKris Buschelman } 51116ebf90aSShri Abhyankar val[jj++] = v1[j]; 512397b6df1SKris Buschelman } 51316ebf90aSShri Abhyankar 51416ebf90aSShri Abhyankar /* B-part */ 51516ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 516bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 517397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 518397b6df1SKris Buschelman } 51916ebf90aSShri Abhyankar val[jj++] = v2[j]; 52016ebf90aSShri Abhyankar } 52116ebf90aSShri Abhyankar irow++; 52216ebf90aSShri Abhyankar } 52316ebf90aSShri Abhyankar PetscFunctionReturn(0); 52416ebf90aSShri Abhyankar } 52516ebf90aSShri Abhyankar 526bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 52716ebf90aSShri Abhyankar { 52816ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 52916ebf90aSShri Abhyankar PetscErrorCode ierr; 53016ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 53116ebf90aSShri Abhyankar PetscInt *row,*col; 53216ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 53316ebf90aSShri Abhyankar PetscScalar *val; 53416ebf90aSShri Abhyankar Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 53516ebf90aSShri Abhyankar Mat_SeqAIJ *aa = (Mat_SeqAIJ*)(mat->A)->data; 53616ebf90aSShri Abhyankar Mat_SeqAIJ *bb = (Mat_SeqAIJ*)(mat->B)->data; 53716ebf90aSShri Abhyankar 53816ebf90aSShri Abhyankar PetscFunctionBegin; 53916ebf90aSShri Abhyankar ai=aa->i; aj=aa->j; bi=bb->i; bj=bb->j; rstart= A->rmap->rstart; 54016ebf90aSShri Abhyankar av=aa->a; bv=bb->a; 54116ebf90aSShri Abhyankar 5422205254eSKarl Rupp garray = mat->garray; 5432205254eSKarl Rupp 544bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 54516ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 54616ebf90aSShri Abhyankar *nnz = nz; 547185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 548185f6596SHong Zhang col = row + nz; 549185f6596SHong Zhang val = (PetscScalar*)(col + nz); 550185f6596SHong Zhang 55116ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 55216ebf90aSShri Abhyankar } else { 55316ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 55416ebf90aSShri Abhyankar } 55516ebf90aSShri Abhyankar 55616ebf90aSShri Abhyankar jj = 0; irow = rstart; 55716ebf90aSShri Abhyankar for (i=0; i<m; i++) { 55816ebf90aSShri Abhyankar ajj = aj + ai[i]; /* ptr to the beginning of this row */ 55916ebf90aSShri Abhyankar countA = ai[i+1] - ai[i]; 56016ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 56116ebf90aSShri Abhyankar bjj = bj + bi[i]; 56216ebf90aSShri Abhyankar v1 = av + ai[i]; 56316ebf90aSShri Abhyankar v2 = bv + bi[i]; 56416ebf90aSShri Abhyankar 56516ebf90aSShri Abhyankar /* A-part */ 56616ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 567bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 56816ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 56916ebf90aSShri Abhyankar } 57016ebf90aSShri Abhyankar val[jj++] = v1[j]; 57116ebf90aSShri Abhyankar } 57216ebf90aSShri Abhyankar 57316ebf90aSShri Abhyankar /* B-part */ 57416ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 575bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 57616ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 57716ebf90aSShri Abhyankar } 57816ebf90aSShri Abhyankar val[jj++] = v2[j]; 57916ebf90aSShri Abhyankar } 58016ebf90aSShri Abhyankar irow++; 58116ebf90aSShri Abhyankar } 58216ebf90aSShri Abhyankar PetscFunctionReturn(0); 58316ebf90aSShri Abhyankar } 58416ebf90aSShri Abhyankar 585bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpibaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 58667877ebaSShri Abhyankar { 58767877ebaSShri Abhyankar Mat_MPIBAIJ *mat = (Mat_MPIBAIJ*)A->data; 58867877ebaSShri Abhyankar Mat_SeqBAIJ *aa = (Mat_SeqBAIJ*)(mat->A)->data; 58967877ebaSShri Abhyankar Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 59067877ebaSShri Abhyankar const PetscInt *ai = aa->i, *bi = bb->i, *aj = aa->j, *bj = bb->j,*ajj, *bjj; 591d985c460SShri Abhyankar const PetscInt *garray = mat->garray,mbs=mat->mbs,rstart=A->rmap->rstart; 59233d57670SJed Brown const PetscInt bs2=mat->bs2; 59367877ebaSShri Abhyankar PetscErrorCode ierr; 59433d57670SJed Brown PetscInt bs,nz,i,j,k,n,jj,irow,countA,countB,idx; 59567877ebaSShri Abhyankar PetscInt *row,*col; 59667877ebaSShri Abhyankar const PetscScalar *av=aa->a, *bv=bb->a,*v1,*v2; 59767877ebaSShri Abhyankar PetscScalar *val; 59867877ebaSShri Abhyankar 59967877ebaSShri Abhyankar PetscFunctionBegin; 60033d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 601bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 60267877ebaSShri Abhyankar nz = bs2*(aa->nz + bb->nz); 60367877ebaSShri Abhyankar *nnz = nz; 604185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 605185f6596SHong Zhang col = row + nz; 606185f6596SHong Zhang val = (PetscScalar*)(col + nz); 607185f6596SHong Zhang 60867877ebaSShri Abhyankar *r = row; *c = col; *v = val; 60967877ebaSShri Abhyankar } else { 61067877ebaSShri Abhyankar row = *r; col = *c; val = *v; 61167877ebaSShri Abhyankar } 61267877ebaSShri Abhyankar 613d985c460SShri Abhyankar jj = 0; irow = rstart; 61467877ebaSShri Abhyankar for (i=0; i<mbs; i++) { 61567877ebaSShri Abhyankar countA = ai[i+1] - ai[i]; 61667877ebaSShri Abhyankar countB = bi[i+1] - bi[i]; 61767877ebaSShri Abhyankar ajj = aj + ai[i]; 61867877ebaSShri Abhyankar bjj = bj + bi[i]; 61967877ebaSShri Abhyankar v1 = av + bs2*ai[i]; 62067877ebaSShri Abhyankar v2 = bv + bs2*bi[i]; 62167877ebaSShri Abhyankar 62267877ebaSShri Abhyankar idx = 0; 62367877ebaSShri Abhyankar /* A-part */ 62467877ebaSShri Abhyankar for (k=0; k<countA; k++) { 62567877ebaSShri Abhyankar for (j=0; j<bs; j++) { 62667877ebaSShri Abhyankar for (n=0; n<bs; n++) { 627bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 628d985c460SShri Abhyankar row[jj] = irow + n + shift; 629d985c460SShri Abhyankar col[jj] = rstart + bs*ajj[k] + j + shift; 63067877ebaSShri Abhyankar } 63167877ebaSShri Abhyankar val[jj++] = v1[idx++]; 63267877ebaSShri Abhyankar } 63367877ebaSShri Abhyankar } 63467877ebaSShri Abhyankar } 63567877ebaSShri Abhyankar 63667877ebaSShri Abhyankar idx = 0; 63767877ebaSShri Abhyankar /* B-part */ 63867877ebaSShri Abhyankar for (k=0; k<countB; k++) { 63967877ebaSShri Abhyankar for (j=0; j<bs; j++) { 64067877ebaSShri Abhyankar for (n=0; n<bs; n++) { 641bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 642d985c460SShri Abhyankar row[jj] = irow + n + shift; 643d985c460SShri Abhyankar col[jj] = bs*garray[bjj[k]] + j + shift; 64467877ebaSShri Abhyankar } 645d985c460SShri Abhyankar val[jj++] = v2[idx++]; 64667877ebaSShri Abhyankar } 64767877ebaSShri Abhyankar } 64867877ebaSShri Abhyankar } 649d985c460SShri Abhyankar irow += bs; 65067877ebaSShri Abhyankar } 65167877ebaSShri Abhyankar PetscFunctionReturn(0); 65267877ebaSShri Abhyankar } 65367877ebaSShri Abhyankar 654bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 65516ebf90aSShri Abhyankar { 65616ebf90aSShri Abhyankar const PetscInt *ai, *aj,*adiag, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 65716ebf90aSShri Abhyankar PetscErrorCode ierr; 658e0bace9bSHong Zhang PetscInt rstart,nz,nza,nzb,i,j,jj,irow,countA,countB; 65916ebf90aSShri Abhyankar PetscInt *row,*col; 66016ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 66116ebf90aSShri Abhyankar PetscScalar *val; 66216ebf90aSShri Abhyankar Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data; 66316ebf90aSShri Abhyankar Mat_SeqAIJ *aa =(Mat_SeqAIJ*)(mat->A)->data; 66416ebf90aSShri Abhyankar Mat_SeqAIJ *bb =(Mat_SeqAIJ*)(mat->B)->data; 66516ebf90aSShri Abhyankar 66616ebf90aSShri Abhyankar PetscFunctionBegin; 66716ebf90aSShri Abhyankar ai=aa->i; aj=aa->j; adiag=aa->diag; 66816ebf90aSShri Abhyankar bi=bb->i; bj=bb->j; garray = mat->garray; 66916ebf90aSShri Abhyankar av=aa->a; bv=bb->a; 6702205254eSKarl Rupp 67116ebf90aSShri Abhyankar rstart = A->rmap->rstart; 67216ebf90aSShri Abhyankar 673bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 674e0bace9bSHong Zhang nza = 0; /* num of upper triangular entries in mat->A, including diagonals */ 675e0bace9bSHong Zhang nzb = 0; /* num of upper triangular entries in mat->B */ 67616ebf90aSShri Abhyankar for (i=0; i<m; i++) { 677e0bace9bSHong Zhang nza += (ai[i+1] - adiag[i]); 67816ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 67916ebf90aSShri Abhyankar bjj = bj + bi[i]; 680e0bace9bSHong Zhang for (j=0; j<countB; j++) { 681e0bace9bSHong Zhang if (garray[bjj[j]] > rstart) nzb++; 682e0bace9bSHong Zhang } 683e0bace9bSHong Zhang } 68416ebf90aSShri Abhyankar 685e0bace9bSHong Zhang nz = nza + nzb; /* total nz of upper triangular part of mat */ 68616ebf90aSShri Abhyankar *nnz = nz; 687185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 688185f6596SHong Zhang col = row + nz; 689185f6596SHong Zhang val = (PetscScalar*)(col + nz); 690185f6596SHong Zhang 69116ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 69216ebf90aSShri Abhyankar } else { 69316ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 69416ebf90aSShri Abhyankar } 69516ebf90aSShri Abhyankar 69616ebf90aSShri Abhyankar jj = 0; irow = rstart; 69716ebf90aSShri Abhyankar for (i=0; i<m; i++) { 69816ebf90aSShri Abhyankar ajj = aj + adiag[i]; /* ptr to the beginning of the diagonal of this row */ 69916ebf90aSShri Abhyankar v1 = av + adiag[i]; 70016ebf90aSShri Abhyankar countA = ai[i+1] - adiag[i]; 70116ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 70216ebf90aSShri Abhyankar bjj = bj + bi[i]; 70316ebf90aSShri Abhyankar v2 = bv + bi[i]; 70416ebf90aSShri Abhyankar 70516ebf90aSShri Abhyankar /* A-part */ 70616ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 707bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 70816ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 70916ebf90aSShri Abhyankar } 71016ebf90aSShri Abhyankar val[jj++] = v1[j]; 71116ebf90aSShri Abhyankar } 71216ebf90aSShri Abhyankar 71316ebf90aSShri Abhyankar /* B-part */ 71416ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 71516ebf90aSShri Abhyankar if (garray[bjj[j]] > rstart) { 716bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 71716ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 71816ebf90aSShri Abhyankar } 71916ebf90aSShri Abhyankar val[jj++] = v2[j]; 72016ebf90aSShri Abhyankar } 721397b6df1SKris Buschelman } 722397b6df1SKris Buschelman irow++; 723397b6df1SKris Buschelman } 724397b6df1SKris Buschelman PetscFunctionReturn(0); 725397b6df1SKris Buschelman } 726397b6df1SKris Buschelman 727dfbe8321SBarry Smith PetscErrorCode MatDestroy_MUMPS(Mat A) 728dfbe8321SBarry Smith { 729e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 730dfbe8321SBarry Smith PetscErrorCode ierr; 731b24902e0SBarry Smith 732397b6df1SKris Buschelman PetscFunctionBegin; 733a5e57a09SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 734a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_rhs);CHKERRQ(ierr); 735a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 736801fbe65SHong Zhang ierr = VecDestroy(&mumps->b_seq);CHKERRQ(ierr); 737a5e57a09SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 738a5e57a09SHong Zhang ierr = PetscFree(mumps->id.perm_in);CHKERRQ(ierr); 739a5e57a09SHong Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); 740b34f08ffSHong Zhang ierr = PetscFree(mumps->info);CHKERRQ(ierr); 74159ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 742a5e57a09SHong Zhang mumps->id.job = JOB_END; 7433ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 7443ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 7453ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { ierr = PetscOmpCtrlDestroy(&mumps->omp_ctrl);CHKERRQ(ierr); } 7463ab56b82SJunchao Zhang #endif 7473ab56b82SJunchao Zhang ierr = PetscFree2(mumps->recvcount,mumps->displs);CHKERRQ(ierr); 748e69c285eSBarry Smith ierr = PetscFree(A->data);CHKERRQ(ierr); 749bf0cc555SLisandro Dalcin 75097969023SHong Zhang /* clear composed functions */ 7513ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 7525a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSetSchurIS_C",NULL);CHKERRQ(ierr); 7535a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorCreateSchurComplement_C",NULL);CHKERRQ(ierr); 754bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetIcntl_C",NULL);CHKERRQ(ierr); 755bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetIcntl_C",NULL);CHKERRQ(ierr); 756bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetCntl_C",NULL);CHKERRQ(ierr); 757bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetCntl_C",NULL);CHKERRQ(ierr); 758ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfo_C",NULL);CHKERRQ(ierr); 759ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfog_C",NULL);CHKERRQ(ierr); 760ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfo_C",NULL);CHKERRQ(ierr); 761ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfog_C",NULL);CHKERRQ(ierr); 76289a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverse_C",NULL);CHKERRQ(ierr); 7630e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverseTranspose_C",NULL);CHKERRQ(ierr); 764397b6df1SKris Buschelman PetscFunctionReturn(0); 765397b6df1SKris Buschelman } 766397b6df1SKris Buschelman 767b24902e0SBarry Smith PetscErrorCode MatSolve_MUMPS(Mat A,Vec b,Vec x) 768b24902e0SBarry Smith { 769e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 770d54de34fSKris Buschelman PetscScalar *array; 77167877ebaSShri Abhyankar Vec b_seq; 772329ec9b3SHong Zhang IS is_iden,is_petsc; 773dfbe8321SBarry Smith PetscErrorCode ierr; 774329ec9b3SHong Zhang PetscInt i; 775cc86f929SStefano Zampini PetscBool second_solve = PETSC_FALSE; 776883f2eb9SBarry Smith static PetscBool cite1 = PETSC_FALSE,cite2 = PETSC_FALSE; 777397b6df1SKris Buschelman 778397b6df1SKris Buschelman PetscFunctionBegin; 779883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS01,\n author = {P.~R. Amestoy and I.~S. Duff and J.-Y. L'Excellent and J. Koster},\n title = {A fully asynchronous multifrontal solver using distributed dynamic scheduling},\n journal = {SIAM Journal on Matrix Analysis and Applications},\n volume = {23},\n number = {1},\n pages = {15--41},\n year = {2001}\n}\n",&cite1);CHKERRQ(ierr); 780883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS02,\n author = {P.~R. Amestoy and A. Guermouche and J.-Y. L'Excellent and S. Pralet},\n title = {Hybrid scheduling for the parallel solution of linear systems},\n journal = {Parallel Computing},\n volume = {32},\n number = {2},\n pages = {136--156},\n year = {2006}\n}\n",&cite2);CHKERRQ(ierr); 7812aca8efcSHong Zhang 782603e8f96SBarry Smith if (A->factorerrortype) { 7832aca8efcSHong Zhang ierr = PetscInfo2(A,"MatSolve is called with singular matrix factor, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 7842aca8efcSHong Zhang ierr = VecSetInf(x);CHKERRQ(ierr); 7852aca8efcSHong Zhang PetscFunctionReturn(0); 7862aca8efcSHong Zhang } 7872aca8efcSHong Zhang 788be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 789a5e57a09SHong Zhang mumps->id.nrhs = 1; 790a5e57a09SHong Zhang b_seq = mumps->b_seq; 7912d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 792329ec9b3SHong Zhang /* MUMPS only supports centralized rhs. Scatter b into a seqential rhs vector */ 793a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 794a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 795a5e57a09SHong Zhang if (!mumps->myid) {ierr = VecGetArray(b_seq,&array);CHKERRQ(ierr);} 7963ab56b82SJunchao Zhang } else { /* petsc_size == 1 */ 797397b6df1SKris Buschelman ierr = VecCopy(b,x);CHKERRQ(ierr); 798397b6df1SKris Buschelman ierr = VecGetArray(x,&array);CHKERRQ(ierr); 799397b6df1SKris Buschelman } 800a5e57a09SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 801a5e57a09SHong Zhang mumps->id.nrhs = 1; 802940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)array; 803397b6df1SKris Buschelman } 804397b6df1SKris Buschelman 805cc86f929SStefano Zampini /* 806cc86f929SStefano Zampini handle condensation step of Schur complement (if any) 807cc86f929SStefano Zampini We set by default ICNTL(26) == -1 when Schur indices have been provided by the user. 808cc86f929SStefano Zampini According to MUMPS (5.0.0) manual, any value should be harmful during the factorization phase 809cc86f929SStefano Zampini Unless the user provides a valid value for ICNTL(26), MatSolve and MatMatSolve routines solve the full system. 810cc86f929SStefano Zampini This requires an extra call to PetscMUMPS_c and the computation of the factors for S 811cc86f929SStefano Zampini */ 812583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 8132d4298aeSJunchao Zhang if (mumps->petsc_size > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 814cc86f929SStefano Zampini second_solve = PETSC_TRUE; 815b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 816cc86f929SStefano Zampini } 817397b6df1SKris Buschelman /* solve phase */ 818329ec9b3SHong Zhang /*-------------*/ 819a5e57a09SHong Zhang mumps->id.job = JOB_SOLVE; 8203ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 821a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 822397b6df1SKris Buschelman 823b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 824cc86f929SStefano Zampini if (second_solve) { 825b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 826cc86f929SStefano Zampini } 827b5fa320bSStefano Zampini 8282d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { /* convert mumps distributed solution to petsc mpi x */ 829a5e57a09SHong Zhang if (mumps->scat_sol && mumps->ICNTL9_pre != mumps->id.ICNTL(9)) { 830a5e57a09SHong Zhang /* when id.ICNTL(9) changes, the contents of lsol_loc may change (not its size, lsol_loc), recreates scat_sol */ 831a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 832397b6df1SKris Buschelman } 833a5e57a09SHong Zhang if (!mumps->scat_sol) { /* create scatter scat_sol */ 834a5e57a09SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,mumps->id.lsol_loc,0,1,&is_iden);CHKERRQ(ierr); /* from */ 835a5e57a09SHong Zhang for (i=0; i<mumps->id.lsol_loc; i++) { 836a5e57a09SHong Zhang mumps->id.isol_loc[i] -= 1; /* change Fortran style to C style */ 837a5e57a09SHong Zhang } 838a5e57a09SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,mumps->id.lsol_loc,mumps->id.isol_loc,PETSC_COPY_VALUES,&is_petsc);CHKERRQ(ierr); /* to */ 8399448b7f1SJunchao Zhang ierr = VecScatterCreate(mumps->x_seq,is_iden,x,is_petsc,&mumps->scat_sol);CHKERRQ(ierr); 8406bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 8416bf464f9SBarry Smith ierr = ISDestroy(&is_petsc);CHKERRQ(ierr); 8422205254eSKarl Rupp 843a5e57a09SHong Zhang mumps->ICNTL9_pre = mumps->id.ICNTL(9); /* save current value of id.ICNTL(9) */ 844397b6df1SKris Buschelman } 845a5e57a09SHong Zhang 846a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 847a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 848329ec9b3SHong Zhang } 849353d7d71SJunchao Zhang 850353d7d71SJunchao Zhang if (mumps->petsc_size > 1) {if (!mumps->myid) {ierr = VecRestoreArray(b_seq,&array);CHKERRQ(ierr);}} 851353d7d71SJunchao Zhang else {ierr = VecRestoreArray(x,&array);CHKERRQ(ierr);} 852353d7d71SJunchao Zhang 8539880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*mumps->id.RINFO(3));CHKERRQ(ierr); 854397b6df1SKris Buschelman PetscFunctionReturn(0); 855397b6df1SKris Buschelman } 856397b6df1SKris Buschelman 85751d5961aSHong Zhang PetscErrorCode MatSolveTranspose_MUMPS(Mat A,Vec b,Vec x) 85851d5961aSHong Zhang { 859e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 86051d5961aSHong Zhang PetscErrorCode ierr; 86151d5961aSHong Zhang 86251d5961aSHong Zhang PetscFunctionBegin; 863a5e57a09SHong Zhang mumps->id.ICNTL(9) = 0; 8640ad0caddSJed Brown ierr = MatSolve_MUMPS(A,b,x);CHKERRQ(ierr); 865a5e57a09SHong Zhang mumps->id.ICNTL(9) = 1; 86651d5961aSHong Zhang PetscFunctionReturn(0); 86751d5961aSHong Zhang } 86851d5961aSHong Zhang 869e0b74bf9SHong Zhang PetscErrorCode MatMatSolve_MUMPS(Mat A,Mat B,Mat X) 870e0b74bf9SHong Zhang { 871bda8bf91SBarry Smith PetscErrorCode ierr; 872b8491c3eSStefano Zampini Mat Bt = NULL; 873b8491c3eSStefano Zampini PetscBool flg, flgT; 874e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 875334c5f61SHong Zhang PetscInt i,nrhs,M; 8762cd7d884SHong Zhang PetscScalar *array,*bray; 877*beae5ec0SHong Zhang PetscInt lsol_loc,nlsol_loc,*isol_loc,*idxx,*isol_loc_save,iidx; 878be818407SHong Zhang MumpsScalar *sol_loc,*sol_loc_save; 879be818407SHong Zhang IS is_to,is_from; 880*beae5ec0SHong Zhang PetscInt k,proc,j,m,myrstart; 881be818407SHong Zhang const PetscInt *rstart; 882*beae5ec0SHong Zhang Vec v_mpi,b_seq,msol_loc; 883be818407SHong Zhang VecScatter scat_rhs,scat_sol; 884be818407SHong Zhang PetscScalar *aa; 885be818407SHong Zhang PetscInt spnr,*ia,*ja; 886d56c302dSHong Zhang Mat_MPIAIJ *b = NULL; 887bda8bf91SBarry Smith 888e0b74bf9SHong Zhang PetscFunctionBegin; 889be818407SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)X,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 890be818407SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_ARG_WRONG,"Matrix X must be MATDENSE matrix"); 891be818407SHong Zhang 8920298fd71SBarry Smith ierr = PetscObjectTypeCompareAny((PetscObject)B,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 893be818407SHong Zhang if (flg) { /* dense B */ 894c0be3364SHong Zhang if (B->rmap->n != X->rmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Matrix B and X must have same row distribution"); 895be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 8960e6b8875SHong Zhang } else { /* sparse B */ 897be818407SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)B,MATTRANSPOSEMAT,&flgT);CHKERRQ(ierr); 8980e6b8875SHong Zhang if (flgT) { /* input B is transpose of actural RHS matrix, 8990e6b8875SHong Zhang because mumps requires sparse compressed COLUMN storage! See MatMatTransposeSolve_MUMPS() */ 900be818407SHong Zhang ierr = MatTransposeGetMat(B,&Bt);CHKERRQ(ierr); 9010f52d626SJunchao Zhang } else SETERRQ(PetscObjectComm((PetscObject)B),PETSC_ERR_ARG_WRONG,"Matrix B must be MATTRANSPOSEMAT matrix"); 902be818407SHong Zhang mumps->id.ICNTL(20)= 1; /* sparse RHS */ 903b8491c3eSStefano Zampini } 90487b22cf4SHong Zhang 9059481e6e9SHong Zhang ierr = MatGetSize(B,&M,&nrhs);CHKERRQ(ierr); 9069481e6e9SHong Zhang mumps->id.nrhs = nrhs; 9079481e6e9SHong Zhang mumps->id.lrhs = M; 9082b691707SHong Zhang mumps->id.rhs = NULL; 9099481e6e9SHong Zhang 9102d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 911b8491c3eSStefano Zampini PetscScalar *aa; 912b8491c3eSStefano Zampini PetscInt spnr,*ia,*ja; 913e94cce23SStefano Zampini PetscBool second_solve = PETSC_FALSE; 914b8491c3eSStefano Zampini 9152cd7d884SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 916b8491c3eSStefano Zampini mumps->id.rhs = (MumpsScalar*)array; 9172b691707SHong Zhang 9182b691707SHong Zhang if (!Bt) { /* dense B */ 9192b691707SHong Zhang /* copy B to X */ 920b8491c3eSStefano Zampini ierr = MatDenseGetArray(B,&bray);CHKERRQ(ierr); 9216444a565SStefano Zampini ierr = PetscMemcpy(array,bray,M*nrhs*sizeof(PetscScalar));CHKERRQ(ierr); 9222cd7d884SHong Zhang ierr = MatDenseRestoreArray(B,&bray);CHKERRQ(ierr); 9232b691707SHong Zhang } else { /* sparse B */ 924b8491c3eSStefano Zampini ierr = MatSeqAIJGetArray(Bt,&aa);CHKERRQ(ierr); 925be818407SHong Zhang ierr = MatGetRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 926c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 9272b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 928b8491c3eSStefano Zampini mumps->id.irhs_ptr = ia; 929b8491c3eSStefano Zampini mumps->id.irhs_sparse = ja; 930b8491c3eSStefano Zampini mumps->id.nz_rhs = ia[spnr] - 1; 931b8491c3eSStefano Zampini mumps->id.rhs_sparse = (MumpsScalar*)aa; 932b8491c3eSStefano Zampini } 933e94cce23SStefano Zampini /* handle condensation step of Schur complement (if any) */ 934583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 935e94cce23SStefano Zampini second_solve = PETSC_TRUE; 936b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 937e94cce23SStefano Zampini } 9382cd7d884SHong Zhang /* solve phase */ 9392cd7d884SHong Zhang /*-------------*/ 9402cd7d884SHong Zhang mumps->id.job = JOB_SOLVE; 9413ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 9422cd7d884SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 943b5fa320bSStefano Zampini 944b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 945e94cce23SStefano Zampini if (second_solve) { 946b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 947e94cce23SStefano Zampini } 9482b691707SHong Zhang if (Bt) { /* sparse B */ 949b8491c3eSStefano Zampini ierr = MatSeqAIJRestoreArray(Bt,&aa);CHKERRQ(ierr); 950be818407SHong Zhang ierr = MatRestoreRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 951c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 952b8491c3eSStefano Zampini } 9532cd7d884SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 954be818407SHong Zhang PetscFunctionReturn(0); 955be818407SHong Zhang } 956801fbe65SHong Zhang 957be818407SHong Zhang /*--------- parallel case: MUMPS requires rhs B to be centralized on the host! --------*/ 9582d4298aeSJunchao Zhang if (mumps->petsc_size > 1 && mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 959241dbb5eSStefano Zampini 960*beae5ec0SHong Zhang /* create msol_loc to hold mumps local solution */ 96171aed81dSHong Zhang isol_loc_save = mumps->id.isol_loc; /* save it for MatSovle() */ 96271aed81dSHong Zhang sol_loc_save = mumps->id.sol_loc; 963801fbe65SHong Zhang 964a1dfcbd9SJunchao Zhang lsol_loc = mumps->id.lsol_loc; 96571aed81dSHong Zhang nlsol_loc = nrhs*lsol_loc; /* length of sol_loc */ 966a1dfcbd9SJunchao Zhang ierr = PetscMalloc2(nlsol_loc,&sol_loc,lsol_loc,&isol_loc);CHKERRQ(ierr); 967940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 968801fbe65SHong Zhang mumps->id.isol_loc = isol_loc; 969801fbe65SHong Zhang 970*beae5ec0SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,nlsol_loc,(PetscScalar*)sol_loc,&msol_loc);CHKERRQ(ierr); 9712cd7d884SHong Zhang 9722b691707SHong Zhang if (!Bt) { /* dense B */ 973*beae5ec0SHong Zhang /* scatter v_mpi to b_seq because MUMPS only supports centralized rhs */ 974be818407SHong Zhang /* wrap dense rhs matrix B into a vector v_mpi */ 9752b691707SHong Zhang ierr = MatGetLocalSize(B,&m,NULL);CHKERRQ(ierr); 9762b691707SHong Zhang ierr = MatDenseGetArray(B,&bray);CHKERRQ(ierr); 9772b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)B),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 9782b691707SHong Zhang ierr = MatDenseRestoreArray(B,&bray);CHKERRQ(ierr); 9792b691707SHong Zhang 980be818407SHong Zhang /* scatter v_mpi to b_seq in proc[0]. MUMPS requires rhs to be centralized on the host! */ 981801fbe65SHong Zhang if (!mumps->myid) { 982*beae5ec0SHong Zhang PetscInt *idx; 983*beae5ec0SHong Zhang /* idx: maps from k-th index of v_mpi to (i,j)-th global entry of B */ 984*beae5ec0SHong Zhang ierr = PetscMalloc1(nrhs*M,&idx);CHKERRQ(ierr); 985be818407SHong Zhang ierr = MatGetOwnershipRanges(B,&rstart);CHKERRQ(ierr); 986be818407SHong Zhang k = 0; 9872d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 988be818407SHong Zhang for (j=0; j<nrhs; j++){ 989*beae5ec0SHong Zhang for (i=rstart[proc]; i<rstart[proc+1]; i++) idx[k++] = j*M + i; 990be818407SHong Zhang } 991be818407SHong Zhang } 992be818407SHong Zhang 993334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,nrhs*M,&b_seq);CHKERRQ(ierr); 994*beae5ec0SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nrhs*M,idx,PETSC_OWN_POINTER,&is_to);CHKERRQ(ierr); 995801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nrhs*M,0,1,&is_from);CHKERRQ(ierr); 996801fbe65SHong Zhang } else { 997334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&b_seq);CHKERRQ(ierr); 998801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_to);CHKERRQ(ierr); 999801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_from);CHKERRQ(ierr); 1000801fbe65SHong Zhang } 10019448b7f1SJunchao Zhang ierr = VecScatterCreate(v_mpi,is_from,b_seq,is_to,&scat_rhs);CHKERRQ(ierr); 1002334c5f61SHong Zhang ierr = VecScatterBegin(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1003801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1004801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1005334c5f61SHong Zhang ierr = VecScatterEnd(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1006801fbe65SHong Zhang 1007801fbe65SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 1008334c5f61SHong Zhang ierr = VecGetArray(b_seq,&bray);CHKERRQ(ierr); 1009940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)bray; 1010334c5f61SHong Zhang ierr = VecRestoreArray(b_seq,&bray);CHKERRQ(ierr); 1011801fbe65SHong Zhang } 1012801fbe65SHong Zhang 10132b691707SHong Zhang } else { /* sparse B */ 10142b691707SHong Zhang b = (Mat_MPIAIJ*)Bt->data; 10152b691707SHong Zhang 1016be818407SHong Zhang /* wrap dense X into a vector v_mpi */ 10172b691707SHong Zhang ierr = MatGetLocalSize(X,&m,NULL);CHKERRQ(ierr); 10182b691707SHong Zhang ierr = MatDenseGetArray(X,&bray);CHKERRQ(ierr); 10192b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)X),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 10202b691707SHong Zhang ierr = MatDenseRestoreArray(X,&bray);CHKERRQ(ierr); 10212b691707SHong Zhang 10222b691707SHong Zhang if (!mumps->myid) { 10232b691707SHong Zhang ierr = MatSeqAIJGetArray(b->A,&aa);CHKERRQ(ierr); 1024be818407SHong Zhang ierr = MatGetRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1025c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 10262b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 10272b691707SHong Zhang mumps->id.irhs_ptr = ia; 10282b691707SHong Zhang mumps->id.irhs_sparse = ja; 10292b691707SHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 10302b691707SHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 10312b691707SHong Zhang } else { 10322b691707SHong Zhang mumps->id.irhs_ptr = NULL; 10332b691707SHong Zhang mumps->id.irhs_sparse = NULL; 10342b691707SHong Zhang mumps->id.nz_rhs = 0; 10352b691707SHong Zhang mumps->id.rhs_sparse = NULL; 10362b691707SHong Zhang } 10372b691707SHong Zhang } 10382b691707SHong Zhang 1039801fbe65SHong Zhang /* solve phase */ 1040801fbe65SHong Zhang /*-------------*/ 1041801fbe65SHong Zhang mumps->id.job = JOB_SOLVE; 10423ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1043801fbe65SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 1044801fbe65SHong Zhang 1045334c5f61SHong Zhang /* scatter mumps distributed solution to petsc vector v_mpi, which shares local arrays with solution matrix X */ 104674f0fcc7SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 104774f0fcc7SHong Zhang ierr = VecPlaceArray(v_mpi,array);CHKERRQ(ierr); 1048801fbe65SHong Zhang 1049334c5f61SHong Zhang /* create scatter scat_sol */ 1050be818407SHong Zhang ierr = MatGetOwnershipRanges(X,&rstart);CHKERRQ(ierr); 1051*beae5ec0SHong Zhang /* iidx: index for scatter mumps solution to petsc X */ 1052*beae5ec0SHong Zhang 1053*beae5ec0SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nlsol_loc,0,1,&is_from);CHKERRQ(ierr); 1054*beae5ec0SHong Zhang ierr = PetscMalloc1(nlsol_loc,&idxx);CHKERRQ(ierr); 1055*beae5ec0SHong Zhang for (i=0; i<lsol_loc; i++) { 1056*beae5ec0SHong Zhang isol_loc[i] -= 1; /* change Fortran style to C style. isol_loc[i+j*lsol_loc] contains x[isol_loc[i]] in j-th vector */ 1057*beae5ec0SHong Zhang 10582d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 1059*beae5ec0SHong Zhang if (isol_loc[i] >= rstart[proc] && isol_loc[i] < rstart[proc+1]) { 1060*beae5ec0SHong Zhang myrstart = rstart[proc]; 1061*beae5ec0SHong Zhang k = isol_loc[i] - myrstart; /* local index on 1st column of petsc vector X */ 1062*beae5ec0SHong Zhang iidx = k + myrstart*nrhs; /* maps mumps isol_loc[i] to petsc index in X */ 1063*beae5ec0SHong Zhang m = rstart[proc+1] - rstart[proc]; /* rows of X for this proc */ 1064*beae5ec0SHong Zhang break; 1065be818407SHong Zhang } 1066be818407SHong Zhang } 1067be818407SHong Zhang 1068*beae5ec0SHong Zhang for (j=0; j<nrhs; j++) idxx[i+j*lsol_loc] = iidx + j*m; 1069801fbe65SHong Zhang } 1070be818407SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nlsol_loc,idxx,PETSC_COPY_VALUES,&is_to);CHKERRQ(ierr); 1071*beae5ec0SHong Zhang ierr = VecScatterCreate(msol_loc,is_from,v_mpi,is_to,&scat_sol);CHKERRQ(ierr); 1072*beae5ec0SHong Zhang ierr = VecScatterBegin(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1073801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1074801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1075*beae5ec0SHong Zhang ierr = VecScatterEnd(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1076801fbe65SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 107771aed81dSHong Zhang 107871aed81dSHong Zhang /* free spaces */ 107971aed81dSHong Zhang mumps->id.sol_loc = sol_loc_save; 108071aed81dSHong Zhang mumps->id.isol_loc = isol_loc_save; 108171aed81dSHong Zhang 108271aed81dSHong Zhang ierr = PetscFree2(sol_loc,isol_loc);CHKERRQ(ierr); 1083801fbe65SHong Zhang ierr = PetscFree(idxx);CHKERRQ(ierr); 1084*beae5ec0SHong Zhang ierr = VecDestroy(&msol_loc);CHKERRQ(ierr); 108574f0fcc7SHong Zhang ierr = VecDestroy(&v_mpi);CHKERRQ(ierr); 10862b691707SHong Zhang if (Bt) { 10872b691707SHong Zhang if (!mumps->myid) { 1088d56c302dSHong Zhang b = (Mat_MPIAIJ*)Bt->data; 10892b691707SHong Zhang ierr = MatSeqAIJRestoreArray(b->A,&aa);CHKERRQ(ierr); 1090be818407SHong Zhang ierr = MatRestoreRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1091c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 10922b691707SHong Zhang } 10932b691707SHong Zhang } else { 1094334c5f61SHong Zhang ierr = VecDestroy(&b_seq);CHKERRQ(ierr); 1095334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_rhs);CHKERRQ(ierr); 10962b691707SHong Zhang } 1097334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_sol);CHKERRQ(ierr); 10989880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*nrhs*mumps->id.RINFO(3));CHKERRQ(ierr); 1099e0b74bf9SHong Zhang PetscFunctionReturn(0); 1100e0b74bf9SHong Zhang } 1101e0b74bf9SHong Zhang 1102eb3ef3b2SHong Zhang PetscErrorCode MatMatTransposeSolve_MUMPS(Mat A,Mat Bt,Mat X) 1103eb3ef3b2SHong Zhang { 1104eb3ef3b2SHong Zhang PetscErrorCode ierr; 1105eb3ef3b2SHong Zhang PetscBool flg; 1106eb3ef3b2SHong Zhang Mat B; 1107eb3ef3b2SHong Zhang 1108eb3ef3b2SHong Zhang PetscFunctionBegin; 1109eb3ef3b2SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)Bt,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 1110eb3ef3b2SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)Bt),PETSC_ERR_ARG_WRONG,"Matrix Bt must be MATAIJ matrix"); 1111eb3ef3b2SHong Zhang 1112eb3ef3b2SHong Zhang /* Create B=Bt^T that uses Bt's data structure */ 1113eb3ef3b2SHong Zhang ierr = MatCreateTranspose(Bt,&B);CHKERRQ(ierr); 1114eb3ef3b2SHong Zhang 11150e6b8875SHong Zhang ierr = MatMatSolve_MUMPS(A,B,X);CHKERRQ(ierr); 1116eb3ef3b2SHong Zhang ierr = MatDestroy(&B);CHKERRQ(ierr); 1117eb3ef3b2SHong Zhang PetscFunctionReturn(0); 1118eb3ef3b2SHong Zhang } 1119eb3ef3b2SHong Zhang 1120ace3df97SHong Zhang #if !defined(PETSC_USE_COMPLEX) 1121a58c3f20SHong Zhang /* 1122a58c3f20SHong Zhang input: 1123a58c3f20SHong Zhang F: numeric factor 1124a58c3f20SHong Zhang output: 1125a58c3f20SHong Zhang nneg: total number of negative pivots 112619d49a3bSHong Zhang nzero: total number of zero pivots 112719d49a3bSHong Zhang npos: (global dimension of F) - nneg - nzero 1128a58c3f20SHong Zhang */ 1129dfbe8321SBarry Smith PetscErrorCode MatGetInertia_SBAIJMUMPS(Mat F,int *nneg,int *nzero,int *npos) 1130a58c3f20SHong Zhang { 1131e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1132dfbe8321SBarry Smith PetscErrorCode ierr; 1133c1490034SHong Zhang PetscMPIInt size; 1134a58c3f20SHong Zhang 1135a58c3f20SHong Zhang PetscFunctionBegin; 1136ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)F),&size);CHKERRQ(ierr); 1137bcb30aebSHong Zhang /* MUMPS 4.3.1 calls ScaLAPACK when ICNTL(13)=0 (default), which does not offer the possibility to compute the inertia of a dense matrix. Set ICNTL(13)=1 to skip ScaLAPACK */ 1138a5e57a09SHong Zhang if (size > 1 && mumps->id.ICNTL(13) != 1) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"ICNTL(13)=%d. -mat_mumps_icntl_13 must be set as 1 for correct global matrix inertia\n",mumps->id.INFOG(13)); 1139ed85ac9fSHong Zhang 1140710ac8efSHong Zhang if (nneg) *nneg = mumps->id.INFOG(12); 1141ed85ac9fSHong Zhang if (nzero || npos) { 1142ed85ac9fSHong Zhang if (mumps->id.ICNTL(24) != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"-mat_mumps_icntl_24 must be set as 1 for null pivot row detection"); 1143710ac8efSHong Zhang if (nzero) *nzero = mumps->id.INFOG(28); 1144710ac8efSHong Zhang if (npos) *npos = F->rmap->N - (mumps->id.INFOG(12) + mumps->id.INFOG(28)); 1145a58c3f20SHong Zhang } 1146a58c3f20SHong Zhang PetscFunctionReturn(0); 1147a58c3f20SHong Zhang } 114819d49a3bSHong Zhang #endif 1149a58c3f20SHong Zhang 11503ab56b82SJunchao Zhang PetscErrorCode MatMumpsGatherNonzerosOnMaster(MatReuse reuse,Mat_MUMPS *mumps) 11513ab56b82SJunchao Zhang { 11523ab56b82SJunchao Zhang PetscErrorCode ierr; 11536ac9f4daSSatish Balay PetscInt i,nz=0,*irn,*jcn=0; 11546ac9f4daSSatish Balay PetscScalar *val=0; 11553ab56b82SJunchao Zhang PetscMPIInt mpinz,*recvcount=NULL,*displs=NULL; 11563ab56b82SJunchao Zhang 11573ab56b82SJunchao Zhang PetscFunctionBegin; 11583ab56b82SJunchao Zhang if (mumps->omp_comm_size > 1) { 11593ab56b82SJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { 11603ab56b82SJunchao Zhang /* master first gathers counts of nonzeros to receive */ 11613ab56b82SJunchao Zhang if (mumps->is_omp_master) { ierr = PetscMalloc2(mumps->omp_comm_size,&recvcount,mumps->omp_comm_size,&displs);CHKERRQ(ierr); } 11623ab56b82SJunchao Zhang ierr = PetscMPIIntCast(mumps->nz,&mpinz);CHKERRQ(ierr); 11633ab56b82SJunchao Zhang ierr = MPI_Gather(&mpinz,1,MPI_INT,recvcount,1,MPI_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11643ab56b82SJunchao Zhang 11653ab56b82SJunchao Zhang /* master allocates memory to receive nonzeros */ 11663ab56b82SJunchao Zhang if (mumps->is_omp_master) { 11673ab56b82SJunchao Zhang displs[0] = 0; 11683ab56b82SJunchao Zhang for (i=1; i<mumps->omp_comm_size; i++) displs[i] = displs[i-1] + recvcount[i-1]; 11693ab56b82SJunchao Zhang nz = displs[mumps->omp_comm_size-1] + recvcount[mumps->omp_comm_size-1]; 11703ab56b82SJunchao Zhang ierr = PetscMalloc(2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar),&irn);CHKERRQ(ierr); 11713ab56b82SJunchao Zhang jcn = irn + nz; 11723ab56b82SJunchao Zhang val = (PetscScalar*)(jcn + nz); 11733ab56b82SJunchao Zhang } 11743ab56b82SJunchao Zhang 11753ab56b82SJunchao Zhang /* save the gatherv plan */ 11763ab56b82SJunchao Zhang mumps->mpinz = mpinz; /* used as send count */ 11773ab56b82SJunchao Zhang mumps->recvcount = recvcount; 11783ab56b82SJunchao Zhang mumps->displs = displs; 11793ab56b82SJunchao Zhang 11803ab56b82SJunchao Zhang /* master gathers nonzeros */ 11813ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->irn,mpinz,MPIU_INT,irn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11823ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->jcn,mpinz,MPIU_INT,jcn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11833ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->val,mpinz,MPIU_SCALAR,val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11843ab56b82SJunchao Zhang 11853ab56b82SJunchao Zhang /* master frees its row/col/val and replaces them with bigger arrays */ 11863ab56b82SJunchao Zhang if (mumps->is_omp_master) { 11873ab56b82SJunchao Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); /* irn/jcn/val are allocated together so free only irn */ 11883ab56b82SJunchao Zhang mumps->nz = nz; /* it is a sum of mpinz over omp_comm */ 11893ab56b82SJunchao Zhang mumps->irn = irn; 11903ab56b82SJunchao Zhang mumps->jcn = jcn; 11913ab56b82SJunchao Zhang mumps->val = val; 11923ab56b82SJunchao Zhang } 11933ab56b82SJunchao Zhang } else { 11943ab56b82SJunchao Zhang ierr = MPI_Gatherv((mumps->is_omp_master?MPI_IN_PLACE:mumps->val),mumps->mpinz,MPIU_SCALAR,mumps->val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 11953ab56b82SJunchao Zhang } 11963ab56b82SJunchao Zhang } 11973ab56b82SJunchao Zhang PetscFunctionReturn(0); 11983ab56b82SJunchao Zhang } 11993ab56b82SJunchao Zhang 12000481f469SBarry Smith PetscErrorCode MatFactorNumeric_MUMPS(Mat F,Mat A,const MatFactorInfo *info) 1201af281ebdSHong Zhang { 1202e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)(F)->data; 12036849ba73SBarry Smith PetscErrorCode ierr; 1204ace3abfcSBarry Smith PetscBool isMPIAIJ; 1205397b6df1SKris Buschelman 1206397b6df1SKris Buschelman PetscFunctionBegin; 12076baea169SHong Zhang if (mumps->id.INFOG(1) < 0) { 12082aca8efcSHong Zhang if (mumps->id.INFOG(1) == -6) { 12092aca8efcSHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called with singular matrix structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 12106baea169SHong Zhang } 12116baea169SHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called after analysis phase fails, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 12122aca8efcSHong Zhang PetscFunctionReturn(0); 12132aca8efcSHong Zhang } 12146baea169SHong Zhang 1215a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_REUSE_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 12163ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_REUSE_MATRIX,mumps);CHKERRQ(ierr); 1217397b6df1SKris Buschelman 1218397b6df1SKris Buschelman /* numerical factorization phase */ 1219329ec9b3SHong Zhang /*-------------------------------*/ 1220a5e57a09SHong Zhang mumps->id.job = JOB_FACTNUMERIC; 12214e34a73bSHong Zhang if (!mumps->id.ICNTL(18)) { /* A is centralized */ 1222a5e57a09SHong Zhang if (!mumps->myid) { 1223940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 1224397b6df1SKris Buschelman } 1225397b6df1SKris Buschelman } else { 1226940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 1227397b6df1SKris Buschelman } 12283ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1229a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) { 1230c0d63f2fSHong Zhang if (A->erroriffailure) { 1231c0d63f2fSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 1232151787a6SHong Zhang } else { 1233c0d63f2fSHong Zhang if (mumps->id.INFOG(1) == -10) { /* numerically singular matrix */ 12342aca8efcSHong Zhang ierr = PetscInfo2(F,"matrix is numerically singular, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1235603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 1236c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -13) { 1237c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, cannot allocate required memory %d megabytes\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1238603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 1239c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -8 || mumps->id.INFOG(1) == -9 || (-16 < mumps->id.INFOG(1) && mumps->id.INFOG(1) < -10) ) { 1240c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d, problem with workarray \n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1241603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 12422aca8efcSHong Zhang } else { 1243c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1244603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 1245151787a6SHong Zhang } 12462aca8efcSHong Zhang } 1247397b6df1SKris Buschelman } 1248a5e57a09SHong Zhang if (!mumps->myid && mumps->id.ICNTL(16) > 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB," mumps->id.ICNTL(16):=%d\n",mumps->id.INFOG(16)); 1249397b6df1SKris Buschelman 1250b3cb21ddSStefano Zampini F->assembled = PETSC_TRUE; 1251a5e57a09SHong Zhang mumps->matstruc = SAME_NONZERO_PATTERN; 1252b3cb21ddSStefano Zampini if (F->schur) { /* reset Schur status to unfactored */ 1253b3cb21ddSStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 1254b3cb21ddSStefano Zampini mumps->id.ICNTL(19) = 2; 1255b3cb21ddSStefano Zampini ierr = MatTranspose(F->schur,MAT_INPLACE_MATRIX,&F->schur);CHKERRQ(ierr); 1256b3cb21ddSStefano Zampini } 1257b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,NULL,MAT_FACTOR_SCHUR_UNFACTORED);CHKERRQ(ierr); 1258b3cb21ddSStefano Zampini } 125967877ebaSShri Abhyankar 1260066565c5SStefano Zampini /* just to be sure that ICNTL(19) value returned by a call from MatMumpsGetIcntl is always consistent */ 1261066565c5SStefano Zampini if (!mumps->sym && mumps->id.ICNTL(19) && mumps->id.ICNTL(19) != 1) mumps->id.ICNTL(19) = 3; 1262066565c5SStefano Zampini 12633ab56b82SJunchao Zhang if (!mumps->is_omp_master) mumps->id.INFO(23) = 0; 12642d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 126567877ebaSShri Abhyankar PetscInt lsol_loc; 126667877ebaSShri Abhyankar PetscScalar *sol_loc; 12672205254eSKarl Rupp 1268c2093ab7SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&isMPIAIJ);CHKERRQ(ierr); 1269c2093ab7SHong Zhang 1270c2093ab7SHong Zhang /* distributed solution; Create x_seq=sol_loc for repeated use */ 1271c2093ab7SHong Zhang if (mumps->x_seq) { 1272c2093ab7SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 1273c2093ab7SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 1274c2093ab7SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 1275c2093ab7SHong Zhang } 1276a5e57a09SHong Zhang lsol_loc = mumps->id.INFO(23); /* length of sol_loc */ 1277dcca6d9dSJed Brown ierr = PetscMalloc2(lsol_loc,&sol_loc,lsol_loc,&mumps->id.isol_loc);CHKERRQ(ierr); 1278a5e57a09SHong Zhang mumps->id.lsol_loc = lsol_loc; 1279940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 1280a5e57a09SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,lsol_loc,sol_loc,&mumps->x_seq);CHKERRQ(ierr); 128167877ebaSShri Abhyankar } 12829880c9b4SStefano Zampini ierr = PetscLogFlops(mumps->id.RINFO(2));CHKERRQ(ierr); 1283397b6df1SKris Buschelman PetscFunctionReturn(0); 1284397b6df1SKris Buschelman } 1285397b6df1SKris Buschelman 12869a2535b5SHong Zhang /* Sets MUMPS options from the options database */ 12879a2535b5SHong Zhang PetscErrorCode PetscSetMUMPSFromOptions(Mat F, Mat A) 1288dcd589f8SShri Abhyankar { 1289e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1290dcd589f8SShri Abhyankar PetscErrorCode ierr; 1291b34f08ffSHong Zhang PetscInt icntl,info[40],i,ninfo=40; 1292ace3abfcSBarry Smith PetscBool flg; 1293dcd589f8SShri Abhyankar 1294dcd589f8SShri Abhyankar PetscFunctionBegin; 1295ce94432eSBarry Smith ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MUMPS Options","Mat");CHKERRQ(ierr); 12969a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_1","ICNTL(1): output stream for error messages","None",mumps->id.ICNTL(1),&icntl,&flg);CHKERRQ(ierr); 12979a2535b5SHong Zhang if (flg) mumps->id.ICNTL(1) = icntl; 12989a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_2","ICNTL(2): output stream for diagnostic printing, statistics, and warning","None",mumps->id.ICNTL(2),&icntl,&flg);CHKERRQ(ierr); 12999a2535b5SHong Zhang if (flg) mumps->id.ICNTL(2) = icntl; 13009a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_3","ICNTL(3): output stream for global information, collected on the host","None",mumps->id.ICNTL(3),&icntl,&flg);CHKERRQ(ierr); 13019a2535b5SHong Zhang if (flg) mumps->id.ICNTL(3) = icntl; 1302dcd589f8SShri Abhyankar 13039a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_4","ICNTL(4): level of printing (0 to 4)","None",mumps->id.ICNTL(4),&icntl,&flg);CHKERRQ(ierr); 13049a2535b5SHong Zhang if (flg) mumps->id.ICNTL(4) = icntl; 13059a2535b5SHong Zhang if (mumps->id.ICNTL(4) || PetscLogPrintInfo) mumps->id.ICNTL(3) = 6; /* resume MUMPS default id.ICNTL(3) = 6 */ 13069a2535b5SHong Zhang 1307d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_6","ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7)","None",mumps->id.ICNTL(6),&icntl,&flg);CHKERRQ(ierr); 13089a2535b5SHong Zhang if (flg) mumps->id.ICNTL(6) = icntl; 13099a2535b5SHong Zhang 1310d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_7","ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis","None",mumps->id.ICNTL(7),&icntl,&flg);CHKERRQ(ierr); 1311dcd589f8SShri Abhyankar if (flg) { 13122d4298aeSJunchao Zhang if (icntl== 1 && mumps->petsc_size > 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"pivot order be set by the user in PERM_IN -- not supported by the PETSc/MUMPS interface\n"); 13132205254eSKarl Rupp else mumps->id.ICNTL(7) = icntl; 1314dcd589f8SShri Abhyankar } 1315e0b74bf9SHong Zhang 13160298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_8","ICNTL(8): scaling strategy (-2 to 8 or 77)","None",mumps->id.ICNTL(8),&mumps->id.ICNTL(8),NULL);CHKERRQ(ierr); 1317d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_9","ICNTL(9): computes the solution using A or A^T","None",mumps->id.ICNTL(9),&mumps->id.ICNTL(9),NULL);CHKERRQ(ierr); handled by MatSolveTranspose_MUMPS() */ 13180298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_10","ICNTL(10): max num of refinements","None",mumps->id.ICNTL(10),&mumps->id.ICNTL(10),NULL);CHKERRQ(ierr); 1319d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_11","ICNTL(11): statistics related to an error analysis (via -ksp_view)","None",mumps->id.ICNTL(11),&mumps->id.ICNTL(11),NULL);CHKERRQ(ierr); 1320d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_12","ICNTL(12): an ordering strategy for symmetric matrices (0 to 3)","None",mumps->id.ICNTL(12),&mumps->id.ICNTL(12),NULL);CHKERRQ(ierr); 1321d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_13","ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting","None",mumps->id.ICNTL(13),&mumps->id.ICNTL(13),NULL);CHKERRQ(ierr); 1322d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_14","ICNTL(14): percentage increase in the estimated working space","None",mumps->id.ICNTL(14),&mumps->id.ICNTL(14),NULL);CHKERRQ(ierr); 1323d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_19","ICNTL(19): computes the Schur complement","None",mumps->id.ICNTL(19),&mumps->id.ICNTL(19),NULL);CHKERRQ(ierr); 132459ac8732SStefano Zampini if (mumps->id.ICNTL(19) <= 0 || mumps->id.ICNTL(19) > 3) { /* reset any schur data (if any) */ 1325b3cb21ddSStefano Zampini ierr = MatDestroy(&F->schur);CHKERRQ(ierr); 132659ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 132759ac8732SStefano Zampini } 13284e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_20","ICNTL(20): the format (dense or sparse) of the right-hand sides","None",mumps->id.ICNTL(20),&mumps->id.ICNTL(20),NULL);CHKERRQ(ierr); -- sparse rhs is not supported in PETSc API */ 1329d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_21","ICNTL(21): the distribution (centralized or distributed) of the solution vectors","None",mumps->id.ICNTL(21),&mumps->id.ICNTL(21),NULL);CHKERRQ(ierr); we only use distributed solution vector */ 13309a2535b5SHong Zhang 1331d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_22","ICNTL(22): in-core/out-of-core factorization and solve (0 or 1)","None",mumps->id.ICNTL(22),&mumps->id.ICNTL(22),NULL);CHKERRQ(ierr); 13320298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_23","ICNTL(23): max size of the working memory (MB) that can allocate per processor","None",mumps->id.ICNTL(23),&mumps->id.ICNTL(23),NULL);CHKERRQ(ierr); 13330298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_24","ICNTL(24): detection of null pivot rows (0 or 1)","None",mumps->id.ICNTL(24),&mumps->id.ICNTL(24),NULL);CHKERRQ(ierr); 13349a2535b5SHong Zhang if (mumps->id.ICNTL(24)) { 13359a2535b5SHong Zhang mumps->id.ICNTL(13) = 1; /* turn-off ScaLAPACK to help with the correct detection of null pivots */ 1336d7ebd59bSHong Zhang } 1337d7ebd59bSHong Zhang 1338b4ed93dbSHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_25","ICNTL(25): computes a solution of a deficient matrix and a null space basis","None",mumps->id.ICNTL(25),&mumps->id.ICNTL(25),NULL);CHKERRQ(ierr); 1339d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_26","ICNTL(26): drives the solution phase if a Schur complement matrix","None",mumps->id.ICNTL(26),&mumps->id.ICNTL(26),NULL);CHKERRQ(ierr); 13402cd7d884SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_27","ICNTL(27): the blocking size for multiple right-hand sides","None",mumps->id.ICNTL(27),&mumps->id.ICNTL(27),NULL);CHKERRQ(ierr); 13410298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_28","ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering","None",mumps->id.ICNTL(28),&mumps->id.ICNTL(28),NULL);CHKERRQ(ierr); 1342d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_29","ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis","None",mumps->id.ICNTL(29),&mumps->id.ICNTL(29),NULL);CHKERRQ(ierr); 134389a9c03aSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_30","ICNTL(30): compute user-specified set of entries in inv(A)","None",mumps->id.ICNTL(30),&mumps->id.ICNTL(30),NULL);CHKERRQ(ierr); */ /* call MatMumpsGetInverse() directly */ 1344d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_31","ICNTL(31): indicates which factors may be discarded during factorization","None",mumps->id.ICNTL(31),&mumps->id.ICNTL(31),NULL);CHKERRQ(ierr); 13454e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_32","ICNTL(32): performs the forward elemination of the right-hand sides during factorization","None",mumps->id.ICNTL(32),&mumps->id.ICNTL(32),NULL);CHKERRQ(ierr); -- not supported by PETSc API */ 13460298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_33","ICNTL(33): compute determinant","None",mumps->id.ICNTL(33),&mumps->id.ICNTL(33),NULL);CHKERRQ(ierr); 1347b4ed93dbSHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_35","ICNTL(35): activates Block Lock Rank (BLR) based factorization","None",mumps->id.ICNTL(35),&mumps->id.ICNTL(35),NULL);CHKERRQ(ierr); 1348dcd589f8SShri Abhyankar 13490298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr); 13500298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr); 13510298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr); 13520298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr); 13530298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_5","CNTL(5): fixation for null pivots","None",mumps->id.CNTL(5),&mumps->id.CNTL(5),NULL);CHKERRQ(ierr); 1354b4ed93dbSHong Zhang ierr = PetscOptionsReal("-mat_mumps_cntl_7","CNTL(7): dropping parameter used during BLR","None",mumps->id.CNTL(7),&mumps->id.CNTL(7),NULL);CHKERRQ(ierr); 1355e5bb22a1SHong Zhang 13562a808120SBarry Smith ierr = PetscOptionsString("-mat_mumps_ooc_tmpdir", "out of core directory", "None", mumps->id.ooc_tmpdir, mumps->id.ooc_tmpdir, 256, NULL);CHKERRQ(ierr); 1357b34f08ffSHong Zhang 135816d797efSHong Zhang ierr = PetscOptionsIntArray("-mat_mumps_view_info","request INFO local to each processor","",info,&ninfo,NULL);CHKERRQ(ierr); 1359b34f08ffSHong Zhang if (ninfo) { 1360b34f08ffSHong Zhang if (ninfo > 40) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"number of INFO %d must <= 40\n",ninfo); 1361b34f08ffSHong Zhang ierr = PetscMalloc1(ninfo,&mumps->info);CHKERRQ(ierr); 1362b34f08ffSHong Zhang mumps->ninfo = ninfo; 1363b34f08ffSHong Zhang for (i=0; i<ninfo; i++) { 13646c4ed002SBarry Smith if (info[i] < 0 || info[i]>40) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"index of INFO %d must between 1 and 40\n",ninfo); 13652a808120SBarry Smith else mumps->info[i] = info[i]; 1366b34f08ffSHong Zhang } 1367b34f08ffSHong Zhang } 1368b34f08ffSHong Zhang 13692a808120SBarry Smith ierr = PetscOptionsEnd();CHKERRQ(ierr); 1370dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1371dcd589f8SShri Abhyankar } 1372dcd589f8SShri Abhyankar 1373f697e70eSHong Zhang PetscErrorCode PetscInitializeMUMPS(Mat A,Mat_MUMPS *mumps) 1374dcd589f8SShri Abhyankar { 1375dcd589f8SShri Abhyankar PetscErrorCode ierr; 13767c405c4aSJunchao Zhang PetscInt nthreads=0; 1377dcd589f8SShri Abhyankar 1378dcd589f8SShri Abhyankar PetscFunctionBegin; 13793ab56b82SJunchao Zhang mumps->petsc_comm = PetscObjectComm((PetscObject)A); 13803ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->petsc_comm,&mumps->petsc_size);CHKERRQ(ierr); 13813ab56b82SJunchao Zhang ierr = MPI_Comm_rank(mumps->petsc_comm,&mumps->myid);CHKERRQ(ierr); /* so that code like "if (!myid)" still works even if mumps_comm is different */ 13823ab56b82SJunchao Zhang 13837c405c4aSJunchao Zhang ierr = PetscOptionsHasName(NULL,NULL,"-mat_mumps_use_omp_threads",&mumps->use_petsc_omp_support);CHKERRQ(ierr); 13847c405c4aSJunchao Zhang if (mumps->use_petsc_omp_support) nthreads = -1; /* -1 will let PetscOmpCtrlCreate() guess a proper value when user did not supply one */ 13857c405c4aSJunchao Zhang ierr = PetscOptionsGetInt(NULL,NULL,"-mat_mumps_use_omp_threads",&nthreads,NULL);CHKERRQ(ierr); 13863ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { 13873ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 13883ab56b82SJunchao Zhang ierr = PetscOmpCtrlCreate(mumps->petsc_comm,nthreads,&mumps->omp_ctrl);CHKERRQ(ierr); 13893ab56b82SJunchao Zhang ierr = PetscOmpCtrlGetOmpComms(mumps->omp_ctrl,&mumps->omp_comm,&mumps->mumps_comm,&mumps->is_omp_master);CHKERRQ(ierr); 13903ab56b82SJunchao Zhang #else 1391217d3b1eSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP_SYS,"the system does not have PETSc OpenMP support but you added the -mat_mumps_use_omp_threads option. Configure PETSc with --with-openmp --download-hwloc (or --with-hwloc) to enable it, see more in MATSOLVERMUMPS manual\n"); 13923ab56b82SJunchao Zhang #endif 13933ab56b82SJunchao Zhang } else { 13943ab56b82SJunchao Zhang mumps->omp_comm = PETSC_COMM_SELF; 13953ab56b82SJunchao Zhang mumps->mumps_comm = mumps->petsc_comm; 13963ab56b82SJunchao Zhang mumps->is_omp_master = PETSC_TRUE; 13973ab56b82SJunchao Zhang } 13983ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->omp_comm,&mumps->omp_comm_size);CHKERRQ(ierr); 13992205254eSKarl Rupp 14002d4298aeSJunchao Zhang mumps->id.comm_fortran = MPI_Comm_c2f(mumps->mumps_comm); 1401f697e70eSHong Zhang mumps->id.job = JOB_INIT; 1402f697e70eSHong Zhang mumps->id.par = 1; /* host participates factorizaton and solve */ 1403f697e70eSHong Zhang mumps->id.sym = mumps->sym; 14043ab56b82SJunchao Zhang 14053ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 14063ab56b82SJunchao Zhang 14073ab56b82SJunchao Zhang /* copy MUMPS default control values from master to slaves. Although slaves do not call MUMPS, they may access these values in code. 14083ab56b82SJunchao Zhang For example, ICNTL(9) is initialized to 1 by MUMPS and slaves check ICNTL(9) in MatSolve_MUMPS. 14093ab56b82SJunchao Zhang */ 14103ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.icntl,40,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 Manual Section 9 */ 14113ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.cntl, 15,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 1412f697e70eSHong Zhang 14130298fd71SBarry Smith mumps->scat_rhs = NULL; 14140298fd71SBarry Smith mumps->scat_sol = NULL; 14159a2535b5SHong Zhang 141670544d5fSHong Zhang /* set PETSc-MUMPS default options - override MUMPS default */ 14179a2535b5SHong Zhang mumps->id.ICNTL(3) = 0; 14189a2535b5SHong Zhang mumps->id.ICNTL(4) = 0; 14192d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 14209a2535b5SHong Zhang mumps->id.ICNTL(18) = 0; /* centralized assembled matrix input */ 14219a2535b5SHong Zhang } else { 14229a2535b5SHong Zhang mumps->id.ICNTL(18) = 3; /* distributed assembled matrix input */ 14234e34a73bSHong Zhang mumps->id.ICNTL(20) = 0; /* rhs is in dense format */ 142470544d5fSHong Zhang mumps->id.ICNTL(21) = 1; /* distributed solution */ 14259a2535b5SHong Zhang } 14266444a565SStefano Zampini 14276444a565SStefano Zampini /* schur */ 14286444a565SStefano Zampini mumps->id.size_schur = 0; 14296444a565SStefano Zampini mumps->id.listvar_schur = NULL; 14306444a565SStefano Zampini mumps->id.schur = NULL; 1431b5fa320bSStefano Zampini mumps->sizeredrhs = 0; 143259ac8732SStefano Zampini mumps->schur_sol = NULL; 143359ac8732SStefano Zampini mumps->schur_sizesol = 0; 1434dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1435dcd589f8SShri Abhyankar } 1436dcd589f8SShri Abhyankar 14379a625307SHong Zhang PetscErrorCode MatFactorSymbolic_MUMPS_ReportIfError(Mat F,Mat A,const MatFactorInfo *info,Mat_MUMPS *mumps) 14385cd7cf9dSHong Zhang { 14395cd7cf9dSHong Zhang PetscErrorCode ierr; 14405cd7cf9dSHong Zhang 14415cd7cf9dSHong Zhang PetscFunctionBegin; 14423ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.infog, 40,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 manual p82 */ 14433ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.rinfog,20,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 14445cd7cf9dSHong Zhang if (mumps->id.INFOG(1) < 0) { 14455cd7cf9dSHong Zhang if (A->erroriffailure) { 14465cd7cf9dSHong Zhang SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in analysis phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 14475cd7cf9dSHong Zhang } else { 14485cd7cf9dSHong Zhang if (mumps->id.INFOG(1) == -6) { 14495cd7cf9dSHong Zhang ierr = PetscInfo2(F,"matrix is singular in structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1450603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_STRUCT_ZEROPIVOT; 14515cd7cf9dSHong Zhang } else if (mumps->id.INFOG(1) == -5 || mumps->id.INFOG(1) == -7) { 14525cd7cf9dSHong Zhang ierr = PetscInfo2(F,"problem of workspace, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1453603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 14545cd7cf9dSHong Zhang } else { 14555cd7cf9dSHong Zhang ierr = PetscInfo2(F,"Error reported by MUMPS in analysis phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1456603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 14575cd7cf9dSHong Zhang } 14585cd7cf9dSHong Zhang } 14595cd7cf9dSHong Zhang } 14605cd7cf9dSHong Zhang PetscFunctionReturn(0); 14615cd7cf9dSHong Zhang } 14625cd7cf9dSHong Zhang 1463a5e57a09SHong Zhang /* Note Petsc r(=c) permutation is used when mumps->id.ICNTL(7)==1 with centralized assembled matrix input; otherwise r and c are ignored */ 14640481f469SBarry Smith PetscErrorCode MatLUFactorSymbolic_AIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1465b24902e0SBarry Smith { 1466e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1467dcd589f8SShri Abhyankar PetscErrorCode ierr; 146867877ebaSShri Abhyankar Vec b; 146967877ebaSShri Abhyankar IS is_iden; 147067877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1471397b6df1SKris Buschelman 1472397b6df1SKris Buschelman PetscFunctionBegin; 1473a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1474dcd589f8SShri Abhyankar 14759a2535b5SHong Zhang /* Set MUMPS options from the options database */ 14769a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1477dcd589f8SShri Abhyankar 1478a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 14793ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1480dcd589f8SShri Abhyankar 148167877ebaSShri Abhyankar /* analysis phase */ 148267877ebaSShri Abhyankar /*----------------*/ 1483a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1484a5e57a09SHong Zhang mumps->id.n = M; 1485a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 148667877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1487a5e57a09SHong Zhang if (!mumps->myid) { 1488a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1489a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1490940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 149167877ebaSShri Abhyankar } 1492a5e57a09SHong Zhang if (mumps->id.ICNTL(7) == 1) { /* use user-provide matrix ordering - assuming r = c ordering */ 14935248a706SHong Zhang /* 14945248a706SHong Zhang PetscBool flag; 14955248a706SHong Zhang ierr = ISEqual(r,c,&flag);CHKERRQ(ierr); 14965248a706SHong Zhang if (!flag) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"row_perm != col_perm"); 14975248a706SHong Zhang ierr = ISView(r,PETSC_VIEWER_STDOUT_SELF); 14985248a706SHong Zhang */ 1499a5e57a09SHong Zhang if (!mumps->myid) { 1500e0b74bf9SHong Zhang const PetscInt *idx; 1501e0b74bf9SHong Zhang PetscInt i,*perm_in; 15022205254eSKarl Rupp 1503785e854fSJed Brown ierr = PetscMalloc1(M,&perm_in);CHKERRQ(ierr); 1504e0b74bf9SHong Zhang ierr = ISGetIndices(r,&idx);CHKERRQ(ierr); 15052205254eSKarl Rupp 1506a5e57a09SHong Zhang mumps->id.perm_in = perm_in; 1507e0b74bf9SHong Zhang for (i=0; i<M; i++) perm_in[i] = idx[i]+1; /* perm_in[]: start from 1, not 0! */ 1508e0b74bf9SHong Zhang ierr = ISRestoreIndices(r,&idx);CHKERRQ(ierr); 1509e0b74bf9SHong Zhang } 1510e0b74bf9SHong Zhang } 151167877ebaSShri Abhyankar } 151267877ebaSShri Abhyankar break; 151367877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1514a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1515a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1516a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1517940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 151867877ebaSShri Abhyankar } 151967877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 1520a5e57a09SHong Zhang if (!mumps->myid) { 15212cd7d884SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,A->rmap->N,&mumps->b_seq);CHKERRQ(ierr); 15222cd7d884SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,A->rmap->N,0,1,&is_iden);CHKERRQ(ierr); 152367877ebaSShri Abhyankar } else { 1524a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&mumps->b_seq);CHKERRQ(ierr); 152567877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_iden);CHKERRQ(ierr); 152667877ebaSShri Abhyankar } 15272a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 15289448b7f1SJunchao Zhang ierr = VecScatterCreate(b,is_iden,mumps->b_seq,is_iden,&mumps->scat_rhs);CHKERRQ(ierr); 15296bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 15306bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 153167877ebaSShri Abhyankar break; 153267877ebaSShri Abhyankar } 15333ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 15345cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 153567877ebaSShri Abhyankar 1536719d5645SBarry Smith F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1537dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 153851d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 15394e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 1540eb3ef3b2SHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 1541b24902e0SBarry Smith PetscFunctionReturn(0); 1542b24902e0SBarry Smith } 1543b24902e0SBarry Smith 1544450b117fSShri Abhyankar /* Note the Petsc r and c permutations are ignored */ 1545450b117fSShri Abhyankar PetscErrorCode MatLUFactorSymbolic_BAIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1546450b117fSShri Abhyankar { 1547e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1548dcd589f8SShri Abhyankar PetscErrorCode ierr; 154967877ebaSShri Abhyankar Vec b; 155067877ebaSShri Abhyankar IS is_iden; 155167877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1552450b117fSShri Abhyankar 1553450b117fSShri Abhyankar PetscFunctionBegin; 1554a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1555dcd589f8SShri Abhyankar 15569a2535b5SHong Zhang /* Set MUMPS options from the options database */ 15579a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1558dcd589f8SShri Abhyankar 1559a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 15603ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 156167877ebaSShri Abhyankar 156267877ebaSShri Abhyankar /* analysis phase */ 156367877ebaSShri Abhyankar /*----------------*/ 1564a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1565a5e57a09SHong Zhang mumps->id.n = M; 1566a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 156767877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1568a5e57a09SHong Zhang if (!mumps->myid) { 1569a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1570a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1571940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 157267877ebaSShri Abhyankar } 157367877ebaSShri Abhyankar } 157467877ebaSShri Abhyankar break; 157567877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1576a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1577a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1578a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1579940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 158067877ebaSShri Abhyankar } 158167877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 1582a5e57a09SHong Zhang if (!mumps->myid) { 1583a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,A->cmap->N,&mumps->b_seq);CHKERRQ(ierr); 158467877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,A->cmap->N,0,1,&is_iden);CHKERRQ(ierr); 158567877ebaSShri Abhyankar } else { 1586a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&mumps->b_seq);CHKERRQ(ierr); 158767877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_iden);CHKERRQ(ierr); 158867877ebaSShri Abhyankar } 15892a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 15909448b7f1SJunchao Zhang ierr = VecScatterCreate(b,is_iden,mumps->b_seq,is_iden,&mumps->scat_rhs);CHKERRQ(ierr); 15916bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 15926bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 159367877ebaSShri Abhyankar break; 159467877ebaSShri Abhyankar } 15953ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 15965cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 159767877ebaSShri Abhyankar 1598450b117fSShri Abhyankar F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1599dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 160051d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 1601450b117fSShri Abhyankar PetscFunctionReturn(0); 1602450b117fSShri Abhyankar } 1603b24902e0SBarry Smith 1604141f4205SHong Zhang /* Note the Petsc r permutation and factor info are ignored */ 160567877ebaSShri Abhyankar PetscErrorCode MatCholeskyFactorSymbolic_MUMPS(Mat F,Mat A,IS r,const MatFactorInfo *info) 1606b24902e0SBarry Smith { 1607e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1608dcd589f8SShri Abhyankar PetscErrorCode ierr; 160967877ebaSShri Abhyankar Vec b; 161067877ebaSShri Abhyankar IS is_iden; 161167877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1612397b6df1SKris Buschelman 1613397b6df1SKris Buschelman PetscFunctionBegin; 1614a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1615dcd589f8SShri Abhyankar 16169a2535b5SHong Zhang /* Set MUMPS options from the options database */ 16179a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1618dcd589f8SShri Abhyankar 1619a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 16203ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1621dcd589f8SShri Abhyankar 162267877ebaSShri Abhyankar /* analysis phase */ 162367877ebaSShri Abhyankar /*----------------*/ 1624a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1625a5e57a09SHong Zhang mumps->id.n = M; 1626a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 162767877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1628a5e57a09SHong Zhang if (!mumps->myid) { 1629a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1630a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1631940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 163267877ebaSShri Abhyankar } 163367877ebaSShri Abhyankar } 163467877ebaSShri Abhyankar break; 163567877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1636a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1637a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1638a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1639940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 164067877ebaSShri Abhyankar } 164167877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 1642a5e57a09SHong Zhang if (!mumps->myid) { 1643a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,A->cmap->N,&mumps->b_seq);CHKERRQ(ierr); 164467877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,A->cmap->N,0,1,&is_iden);CHKERRQ(ierr); 164567877ebaSShri Abhyankar } else { 1646a5e57a09SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&mumps->b_seq);CHKERRQ(ierr); 164767877ebaSShri Abhyankar ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_iden);CHKERRQ(ierr); 164867877ebaSShri Abhyankar } 16492a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 16509448b7f1SJunchao Zhang ierr = VecScatterCreate(b,is_iden,mumps->b_seq,is_iden,&mumps->scat_rhs);CHKERRQ(ierr); 16516bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 16526bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 165367877ebaSShri Abhyankar break; 165467877ebaSShri Abhyankar } 16553ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 16565cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 16575cd7cf9dSHong Zhang 16582792810eSHong Zhang F->ops->choleskyfactornumeric = MatFactorNumeric_MUMPS; 1659dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 166051d5961aSHong Zhang F->ops->solvetranspose = MatSolve_MUMPS; 16614e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 166223a5080aSHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 16634e34a73bSHong Zhang #if defined(PETSC_USE_COMPLEX) 16640298fd71SBarry Smith F->ops->getinertia = NULL; 16654e34a73bSHong Zhang #else 16664e34a73bSHong Zhang F->ops->getinertia = MatGetInertia_SBAIJMUMPS; 1667db4efbfdSBarry Smith #endif 1668b24902e0SBarry Smith PetscFunctionReturn(0); 1669b24902e0SBarry Smith } 1670b24902e0SBarry Smith 167164e6c443SBarry Smith PetscErrorCode MatView_MUMPS(Mat A,PetscViewer viewer) 167274ed9c26SBarry Smith { 1673f6c57405SHong Zhang PetscErrorCode ierr; 167464e6c443SBarry Smith PetscBool iascii; 167564e6c443SBarry Smith PetscViewerFormat format; 1676e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 1677f6c57405SHong Zhang 1678f6c57405SHong Zhang PetscFunctionBegin; 167964e6c443SBarry Smith /* check if matrix is mumps type */ 168064e6c443SBarry Smith if (A->ops->solve != MatSolve_MUMPS) PetscFunctionReturn(0); 168164e6c443SBarry Smith 1682251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 168364e6c443SBarry Smith if (iascii) { 168464e6c443SBarry Smith ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 168564e6c443SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO) { 168664e6c443SBarry Smith ierr = PetscViewerASCIIPrintf(viewer,"MUMPS run parameters:\n");CHKERRQ(ierr); 1687a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," SYM (matrix type): %d \n",mumps->id.sym);CHKERRQ(ierr); 1688a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," PAR (host participation): %d \n",mumps->id.par);CHKERRQ(ierr); 1689a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(1) (output for error): %d \n",mumps->id.ICNTL(1));CHKERRQ(ierr); 1690a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(2) (output of diagnostic msg): %d \n",mumps->id.ICNTL(2));CHKERRQ(ierr); 1691a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(3) (output for global info): %d \n",mumps->id.ICNTL(3));CHKERRQ(ierr); 1692a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(4) (level of printing): %d \n",mumps->id.ICNTL(4));CHKERRQ(ierr); 1693a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(5) (input mat struct): %d \n",mumps->id.ICNTL(5));CHKERRQ(ierr); 1694a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(6) (matrix prescaling): %d \n",mumps->id.ICNTL(6));CHKERRQ(ierr); 1695d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(7) (sequential matrix ordering):%d \n",mumps->id.ICNTL(7));CHKERRQ(ierr); 1696d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(8) (scaling strategy): %d \n",mumps->id.ICNTL(8));CHKERRQ(ierr); 1697a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(10) (max num of refinements): %d \n",mumps->id.ICNTL(10));CHKERRQ(ierr); 1698a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(11) (error analysis): %d \n",mumps->id.ICNTL(11));CHKERRQ(ierr); 1699a5e57a09SHong Zhang if (mumps->id.ICNTL(11)>0) { 1700a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(4) (inf norm of input mat): %g\n",mumps->id.RINFOG(4));CHKERRQ(ierr); 1701a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(5) (inf norm of solution): %g\n",mumps->id.RINFOG(5));CHKERRQ(ierr); 1702a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(6) (inf norm of residual): %g\n",mumps->id.RINFOG(6));CHKERRQ(ierr); 1703a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(7),RINFOG(8) (backward error est): %g, %g\n",mumps->id.RINFOG(7),mumps->id.RINFOG(8));CHKERRQ(ierr); 1704a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(9) (error estimate): %g \n",mumps->id.RINFOG(9));CHKERRQ(ierr); 1705a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(10),RINFOG(11)(condition numbers): %g, %g\n",mumps->id.RINFOG(10),mumps->id.RINFOG(11));CHKERRQ(ierr); 1706f6c57405SHong Zhang } 1707a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(12) (efficiency control): %d \n",mumps->id.ICNTL(12));CHKERRQ(ierr); 1708a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(13) (efficiency control): %d \n",mumps->id.ICNTL(13));CHKERRQ(ierr); 1709a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(14) (percentage of estimated workspace increase): %d \n",mumps->id.ICNTL(14));CHKERRQ(ierr); 1710f6c57405SHong Zhang /* ICNTL(15-17) not used */ 1711a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(18) (input mat struct): %d \n",mumps->id.ICNTL(18));CHKERRQ(ierr); 1712d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(19) (Schur complement info): %d \n",mumps->id.ICNTL(19));CHKERRQ(ierr); 1713a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(20) (rhs sparse pattern): %d \n",mumps->id.ICNTL(20));CHKERRQ(ierr); 1714ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," ICNTL(21) (solution struct): %d \n",mumps->id.ICNTL(21));CHKERRQ(ierr); 1715a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(22) (in-core/out-of-core facility): %d \n",mumps->id.ICNTL(22));CHKERRQ(ierr); 1716a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(23) (max size of memory can be allocated locally):%d \n",mumps->id.ICNTL(23));CHKERRQ(ierr); 1717c0165424SHong Zhang 1718a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(24) (detection of null pivot rows): %d \n",mumps->id.ICNTL(24));CHKERRQ(ierr); 1719a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(25) (computation of a null space basis): %d \n",mumps->id.ICNTL(25));CHKERRQ(ierr); 1720a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(26) (Schur options for rhs or solution): %d \n",mumps->id.ICNTL(26));CHKERRQ(ierr); 1721a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(27) (experimental parameter): %d \n",mumps->id.ICNTL(27));CHKERRQ(ierr); 1722a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(28) (use parallel or sequential ordering): %d \n",mumps->id.ICNTL(28));CHKERRQ(ierr); 1723a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(29) (parallel ordering): %d \n",mumps->id.ICNTL(29));CHKERRQ(ierr); 172442179a6aSHong Zhang 1725a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(30) (user-specified set of entries in inv(A)): %d \n",mumps->id.ICNTL(30));CHKERRQ(ierr); 1726a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(31) (factors is discarded in the solve phase): %d \n",mumps->id.ICNTL(31));CHKERRQ(ierr); 1727a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(33) (compute determinant): %d \n",mumps->id.ICNTL(33));CHKERRQ(ierr); 17286e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(35) (activate BLR based factorization): %d \n",mumps->id.ICNTL(35));CHKERRQ(ierr); 1729f6c57405SHong Zhang 1730a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(1) (relative pivoting threshold): %g \n",mumps->id.CNTL(1));CHKERRQ(ierr); 1731a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(2) (stopping criterion of refinement): %g \n",mumps->id.CNTL(2));CHKERRQ(ierr); 1732ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(3) (absolute pivoting threshold): %g \n",mumps->id.CNTL(3));CHKERRQ(ierr); 1733ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(4) (value of static pivoting): %g \n",mumps->id.CNTL(4));CHKERRQ(ierr); 1734a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(5) (fixation for null pivots): %g \n",mumps->id.CNTL(5));CHKERRQ(ierr); 17356e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(7) (dropping parameter for BLR): %g \n",mumps->id.CNTL(7));CHKERRQ(ierr); 1736f6c57405SHong Zhang 1737f6c57405SHong Zhang /* infomation local to each processor */ 173834ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(1) (local estimated flops for the elimination after analysis): \n");CHKERRQ(ierr); 17391575c14dSBarry Smith ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr); 1740a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(1));CHKERRQ(ierr); 17412a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 174234ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(2) (local estimated flops for the assembly after factorization): \n");CHKERRQ(ierr); 1743a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(2));CHKERRQ(ierr); 17442a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 174534ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(3) (local estimated flops for the elimination after factorization): \n");CHKERRQ(ierr); 1746a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(3));CHKERRQ(ierr); 17472a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1748f6c57405SHong Zhang 174934ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(15) (estimated size of (in MB) MUMPS internal data for running numerical factorization): \n");CHKERRQ(ierr); 1750a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(15));CHKERRQ(ierr); 17512a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1752f6c57405SHong Zhang 175334ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(16) (size of (in MB) MUMPS internal data used during numerical factorization): \n");CHKERRQ(ierr); 1754a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(16));CHKERRQ(ierr); 17552a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1756f6c57405SHong Zhang 175734ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(23) (num of pivots eliminated on this processor after factorization): \n");CHKERRQ(ierr); 1758a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(23));CHKERRQ(ierr); 17592a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1760b34f08ffSHong Zhang 1761b34f08ffSHong Zhang if (mumps->ninfo && mumps->ninfo <= 40){ 1762b34f08ffSHong Zhang PetscInt i; 1763b34f08ffSHong Zhang for (i=0; i<mumps->ninfo; i++){ 1764b34f08ffSHong Zhang ierr = PetscViewerASCIIPrintf(viewer, " INFO(%d): \n",mumps->info[i]);CHKERRQ(ierr); 1765b34f08ffSHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(mumps->info[i]));CHKERRQ(ierr); 17662a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1767b34f08ffSHong Zhang } 1768b34f08ffSHong Zhang } 17691575c14dSBarry Smith ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr); 1770f6c57405SHong Zhang 1771a5e57a09SHong Zhang if (!mumps->myid) { /* information from the host */ 1772a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(1) (global estimated flops for the elimination after analysis): %g \n",mumps->id.RINFOG(1));CHKERRQ(ierr); 1773a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(2) (global estimated flops for the assembly after factorization): %g \n",mumps->id.RINFOG(2));CHKERRQ(ierr); 1774a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(3) (global estimated flops for the elimination after factorization): %g \n",mumps->id.RINFOG(3));CHKERRQ(ierr); 1775a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," (RINFOG(12) RINFOG(13))*2^INFOG(34) (determinant): (%g,%g)*(2^%d)\n",mumps->id.RINFOG(12),mumps->id.RINFOG(13),mumps->id.INFOG(34));CHKERRQ(ierr); 1776f6c57405SHong Zhang 1777a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(3) (estimated real workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(3));CHKERRQ(ierr); 1778a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(4) (estimated integer workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(4));CHKERRQ(ierr); 1779a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(5) (estimated maximum front size in the complete tree): %d \n",mumps->id.INFOG(5));CHKERRQ(ierr); 1780a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(6) (number of nodes in the complete tree): %d \n",mumps->id.INFOG(6));CHKERRQ(ierr); 1781a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(7) (ordering option effectively use after analysis): %d \n",mumps->id.INFOG(7));CHKERRQ(ierr); 1782a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(8) (structural symmetry in percent of the permuted matrix after analysis): %d \n",mumps->id.INFOG(8));CHKERRQ(ierr); 1783a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(9) (total real/complex workspace to store the matrix factors after factorization): %d \n",mumps->id.INFOG(9));CHKERRQ(ierr); 1784a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(10) (total integer space store the matrix factors after factorization): %d \n",mumps->id.INFOG(10));CHKERRQ(ierr); 1785a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(11) (order of largest frontal matrix after factorization): %d \n",mumps->id.INFOG(11));CHKERRQ(ierr); 1786a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(12) (number of off-diagonal pivots): %d \n",mumps->id.INFOG(12));CHKERRQ(ierr); 1787a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(13) (number of delayed pivots after factorization): %d \n",mumps->id.INFOG(13));CHKERRQ(ierr); 1788a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(14) (number of memory compress after factorization): %d \n",mumps->id.INFOG(14));CHKERRQ(ierr); 1789a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(15) (number of steps of iterative refinement after solution): %d \n",mumps->id.INFOG(15));CHKERRQ(ierr); 1790a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(16) (estimated size (in MB) of all MUMPS internal data for factorization after analysis: value on the most memory consuming processor): %d \n",mumps->id.INFOG(16));CHKERRQ(ierr); 1791a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(17) (estimated size of all MUMPS internal data for factorization after analysis: sum over all processors): %d \n",mumps->id.INFOG(17));CHKERRQ(ierr); 1792a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(18) (size of all MUMPS internal data allocated during factorization: value on the most memory consuming processor): %d \n",mumps->id.INFOG(18));CHKERRQ(ierr); 1793a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(19) (size of all MUMPS internal data allocated during factorization: sum over all processors): %d \n",mumps->id.INFOG(19));CHKERRQ(ierr); 1794a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(20) (estimated number of entries in the factors): %d \n",mumps->id.INFOG(20));CHKERRQ(ierr); 1795a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(21) (size in MB of memory effectively used during factorization - value on the most memory consuming processor): %d \n",mumps->id.INFOG(21));CHKERRQ(ierr); 1796a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(22) (size in MB of memory effectively used during factorization - sum over all processors): %d \n",mumps->id.INFOG(22));CHKERRQ(ierr); 1797a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(23) (after analysis: value of ICNTL(6) effectively used): %d \n",mumps->id.INFOG(23));CHKERRQ(ierr); 1798a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(24) (after analysis: value of ICNTL(12) effectively used): %d \n",mumps->id.INFOG(24));CHKERRQ(ierr); 1799a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(25) (after factorization: number of pivots modified by static pivoting): %d \n",mumps->id.INFOG(25));CHKERRQ(ierr); 180040d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(28) (after factorization: number of null pivots encountered): %d\n",mumps->id.INFOG(28));CHKERRQ(ierr); 180140d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(29) (after factorization: effective number of entries in the factors (sum over all processors)): %d\n",mumps->id.INFOG(29));CHKERRQ(ierr); 180240d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(30, 31) (after solution: size in Mbytes of memory used during solution phase): %d, %d\n",mumps->id.INFOG(30),mumps->id.INFOG(31));CHKERRQ(ierr); 180340d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(32) (after analysis: type of analysis done): %d\n",mumps->id.INFOG(32));CHKERRQ(ierr); 180440d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(33) (value used for ICNTL(8)): %d\n",mumps->id.INFOG(33));CHKERRQ(ierr); 180540d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(34) (exponent of the determinant if determinant is requested): %d\n",mumps->id.INFOG(34));CHKERRQ(ierr); 1806f6c57405SHong Zhang } 1807f6c57405SHong Zhang } 1808cb828f0fSHong Zhang } 1809f6c57405SHong Zhang PetscFunctionReturn(0); 1810f6c57405SHong Zhang } 1811f6c57405SHong Zhang 181235bd34faSBarry Smith PetscErrorCode MatGetInfo_MUMPS(Mat A,MatInfoType flag,MatInfo *info) 181335bd34faSBarry Smith { 1814e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)A->data; 181535bd34faSBarry Smith 181635bd34faSBarry Smith PetscFunctionBegin; 181735bd34faSBarry Smith info->block_size = 1.0; 1818cb828f0fSHong Zhang info->nz_allocated = mumps->id.INFOG(20); 1819cb828f0fSHong Zhang info->nz_used = mumps->id.INFOG(20); 182035bd34faSBarry Smith info->nz_unneeded = 0.0; 182135bd34faSBarry Smith info->assemblies = 0.0; 182235bd34faSBarry Smith info->mallocs = 0.0; 182335bd34faSBarry Smith info->memory = 0.0; 182435bd34faSBarry Smith info->fill_ratio_given = 0; 182535bd34faSBarry Smith info->fill_ratio_needed = 0; 182635bd34faSBarry Smith info->factor_mallocs = 0; 182735bd34faSBarry Smith PetscFunctionReturn(0); 182835bd34faSBarry Smith } 182935bd34faSBarry Smith 18305ccb76cbSHong Zhang /* -------------------------------------------------------------------------------------------*/ 18318e7ba810SStefano Zampini PetscErrorCode MatFactorSetSchurIS_MUMPS(Mat F, IS is) 18326444a565SStefano Zampini { 1833e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 18348e7ba810SStefano Zampini const PetscInt *idxs; 18358e7ba810SStefano Zampini PetscInt size,i; 18366444a565SStefano Zampini PetscErrorCode ierr; 18376444a565SStefano Zampini 18386444a565SStefano Zampini PetscFunctionBegin; 1839b3cb21ddSStefano Zampini ierr = ISGetLocalSize(is,&size);CHKERRQ(ierr); 18402d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 18413ab56b82SJunchao Zhang PetscBool ls,gs; /* gs is false if any rank other than root has non-empty IS */ 1842241dbb5eSStefano Zampini 18433ab56b82SJunchao Zhang ls = mumps->myid ? (size ? PETSC_FALSE : PETSC_TRUE) : PETSC_TRUE; /* always true on root; false on others if their size != 0 */ 18443ab56b82SJunchao Zhang ierr = MPI_Allreduce(&ls,&gs,1,MPIU_BOOL,MPI_LAND,mumps->petsc_comm);CHKERRQ(ierr); 1845241dbb5eSStefano Zampini if (!gs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MUMPS distributed parallel Schur complements not yet supported from PETSc\n"); 1846241dbb5eSStefano Zampini } 18476444a565SStefano Zampini if (mumps->id.size_schur != size) { 18486444a565SStefano Zampini ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr); 18496444a565SStefano Zampini mumps->id.size_schur = size; 18506444a565SStefano Zampini mumps->id.schur_lld = size; 18516444a565SStefano Zampini ierr = PetscMalloc2(size,&mumps->id.listvar_schur,size*size,&mumps->id.schur);CHKERRQ(ierr); 18526444a565SStefano Zampini } 1853b3cb21ddSStefano Zampini 1854b3cb21ddSStefano Zampini /* Schur complement matrix */ 1855b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.size_schur,(PetscScalar*)mumps->id.schur,&F->schur);CHKERRQ(ierr); 1856b3cb21ddSStefano Zampini if (mumps->sym == 1) { 1857b3cb21ddSStefano Zampini ierr = MatSetOption(F->schur,MAT_SPD,PETSC_TRUE);CHKERRQ(ierr); 1858b3cb21ddSStefano Zampini } 1859b3cb21ddSStefano Zampini 1860b3cb21ddSStefano Zampini /* MUMPS expects Fortran style indices */ 18618e7ba810SStefano Zampini ierr = ISGetIndices(is,&idxs);CHKERRQ(ierr); 18626444a565SStefano Zampini ierr = PetscMemcpy(mumps->id.listvar_schur,idxs,size*sizeof(PetscInt));CHKERRQ(ierr); 18638e7ba810SStefano Zampini for (i=0;i<size;i++) mumps->id.listvar_schur[i]++; 18648e7ba810SStefano Zampini ierr = ISRestoreIndices(is,&idxs);CHKERRQ(ierr); 18652d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 1866241dbb5eSStefano Zampini mumps->id.ICNTL(19) = 1; /* MUMPS returns Schur centralized on the host */ 1867241dbb5eSStefano Zampini } else { 18686444a565SStefano Zampini if (F->factortype == MAT_FACTOR_LU) { 186959ac8732SStefano Zampini mumps->id.ICNTL(19) = 3; /* MUMPS returns full matrix */ 18706444a565SStefano Zampini } else { 187159ac8732SStefano Zampini mumps->id.ICNTL(19) = 2; /* MUMPS returns lower triangular part */ 18726444a565SStefano Zampini } 1873241dbb5eSStefano Zampini } 187459ac8732SStefano Zampini /* set a special value of ICNTL (not handled my MUMPS) to be used in the solve phase by PETSc */ 1875b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 18766444a565SStefano Zampini PetscFunctionReturn(0); 18776444a565SStefano Zampini } 187859ac8732SStefano Zampini 18796444a565SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 18805a05ddb0SStefano Zampini PetscErrorCode MatFactorCreateSchurComplement_MUMPS(Mat F,Mat* S) 18816444a565SStefano Zampini { 18826444a565SStefano Zampini Mat St; 1883e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 18846444a565SStefano Zampini PetscScalar *array; 18856444a565SStefano Zampini #if defined(PETSC_USE_COMPLEX) 18868ac429a0SStefano Zampini PetscScalar im = PetscSqrtScalar((PetscScalar)-1.0); 18876444a565SStefano Zampini #endif 18886444a565SStefano Zampini PetscErrorCode ierr; 18896444a565SStefano Zampini 18906444a565SStefano Zampini PetscFunctionBegin; 18915a05ddb0SStefano Zampini if (!mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it"); 1892241dbb5eSStefano Zampini ierr = MatCreate(PETSC_COMM_SELF,&St);CHKERRQ(ierr); 18936444a565SStefano Zampini ierr = MatSetSizes(St,PETSC_DECIDE,PETSC_DECIDE,mumps->id.size_schur,mumps->id.size_schur);CHKERRQ(ierr); 18946444a565SStefano Zampini ierr = MatSetType(St,MATDENSE);CHKERRQ(ierr); 18956444a565SStefano Zampini ierr = MatSetUp(St);CHKERRQ(ierr); 18966444a565SStefano Zampini ierr = MatDenseGetArray(St,&array);CHKERRQ(ierr); 189759ac8732SStefano Zampini if (!mumps->sym) { /* MUMPS always return a full matrix */ 18986444a565SStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 18996444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19006444a565SStefano Zampini for (i=0;i<N;i++) { 19016444a565SStefano Zampini for (j=0;j<N;j++) { 19026444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19036444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19046444a565SStefano Zampini #else 19056444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19066444a565SStefano Zampini #endif 19076444a565SStefano Zampini array[j*N+i] = val; 19086444a565SStefano Zampini } 19096444a565SStefano Zampini } 19106444a565SStefano Zampini } else { /* stored by columns */ 19116444a565SStefano Zampini ierr = PetscMemcpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur*sizeof(PetscScalar));CHKERRQ(ierr); 19126444a565SStefano Zampini } 19136444a565SStefano Zampini } else { /* either full or lower-triangular (not packed) */ 19146444a565SStefano Zampini if (mumps->id.ICNTL(19) == 2) { /* lower triangular stored by columns */ 19156444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19166444a565SStefano Zampini for (i=0;i<N;i++) { 19176444a565SStefano Zampini for (j=i;j<N;j++) { 19186444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19196444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19206444a565SStefano Zampini #else 19216444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19226444a565SStefano Zampini #endif 19236444a565SStefano Zampini array[i*N+j] = val; 19246444a565SStefano Zampini array[j*N+i] = val; 19256444a565SStefano Zampini } 19266444a565SStefano Zampini } 19276444a565SStefano Zampini } else if (mumps->id.ICNTL(19) == 3) { /* full matrix */ 19286444a565SStefano Zampini ierr = PetscMemcpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur*sizeof(PetscScalar));CHKERRQ(ierr); 19296444a565SStefano Zampini } else { /* ICNTL(19) == 1 lower triangular stored by rows */ 19306444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 19316444a565SStefano Zampini for (i=0;i<N;i++) { 19326444a565SStefano Zampini for (j=0;j<i+1;j++) { 19336444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 19346444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 19356444a565SStefano Zampini #else 19366444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 19376444a565SStefano Zampini #endif 19386444a565SStefano Zampini array[i*N+j] = val; 19396444a565SStefano Zampini array[j*N+i] = val; 19406444a565SStefano Zampini } 19416444a565SStefano Zampini } 19426444a565SStefano Zampini } 19436444a565SStefano Zampini } 19446444a565SStefano Zampini ierr = MatDenseRestoreArray(St,&array);CHKERRQ(ierr); 19456444a565SStefano Zampini *S = St; 19466444a565SStefano Zampini PetscFunctionReturn(0); 19476444a565SStefano Zampini } 19486444a565SStefano Zampini 194959ac8732SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 19505ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt ival) 19515ccb76cbSHong Zhang { 1952e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 19535ccb76cbSHong Zhang 19545ccb76cbSHong Zhang PetscFunctionBegin; 1955a5e57a09SHong Zhang mumps->id.ICNTL(icntl) = ival; 19565ccb76cbSHong Zhang PetscFunctionReturn(0); 19575ccb76cbSHong Zhang } 19585ccb76cbSHong Zhang 1959bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt *ival) 1960bc6112feSHong Zhang { 1961e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1962bc6112feSHong Zhang 1963bc6112feSHong Zhang PetscFunctionBegin; 1964bc6112feSHong Zhang *ival = mumps->id.ICNTL(icntl); 1965bc6112feSHong Zhang PetscFunctionReturn(0); 1966bc6112feSHong Zhang } 1967bc6112feSHong Zhang 19685ccb76cbSHong Zhang /*@ 19695ccb76cbSHong Zhang MatMumpsSetIcntl - Set MUMPS parameter ICNTL() 19705ccb76cbSHong Zhang 19715ccb76cbSHong Zhang Logically Collective on Mat 19725ccb76cbSHong Zhang 19735ccb76cbSHong Zhang Input Parameters: 19745ccb76cbSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 19755ccb76cbSHong Zhang . icntl - index of MUMPS parameter array ICNTL() 19765ccb76cbSHong Zhang - ival - value of MUMPS ICNTL(icntl) 19775ccb76cbSHong Zhang 19785ccb76cbSHong Zhang Options Database: 19795ccb76cbSHong Zhang . -mat_mumps_icntl_<icntl> <ival> 19805ccb76cbSHong Zhang 19815ccb76cbSHong Zhang Level: beginner 19825ccb76cbSHong Zhang 198396a0c994SBarry Smith References: 198496a0c994SBarry Smith . MUMPS Users' Guide 19855ccb76cbSHong Zhang 19869fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 19875ccb76cbSHong Zhang @*/ 19885ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl(Mat F,PetscInt icntl,PetscInt ival) 19895ccb76cbSHong Zhang { 19905ccb76cbSHong Zhang PetscErrorCode ierr; 19915ccb76cbSHong Zhang 19925ccb76cbSHong Zhang PetscFunctionBegin; 19932989dfd4SHong Zhang PetscValidType(F,1); 19942989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 19955ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 19965ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,ival,3); 19975ccb76cbSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetIcntl_C",(Mat,PetscInt,PetscInt),(F,icntl,ival));CHKERRQ(ierr); 19985ccb76cbSHong Zhang PetscFunctionReturn(0); 19995ccb76cbSHong Zhang } 20005ccb76cbSHong Zhang 2001a21f80fcSHong Zhang /*@ 2002a21f80fcSHong Zhang MatMumpsGetIcntl - Get MUMPS parameter ICNTL() 2003a21f80fcSHong Zhang 2004a21f80fcSHong Zhang Logically Collective on Mat 2005a21f80fcSHong Zhang 2006a21f80fcSHong Zhang Input Parameters: 2007a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2008a21f80fcSHong Zhang - icntl - index of MUMPS parameter array ICNTL() 2009a21f80fcSHong Zhang 2010a21f80fcSHong Zhang Output Parameter: 2011a21f80fcSHong Zhang . ival - value of MUMPS ICNTL(icntl) 2012a21f80fcSHong Zhang 2013a21f80fcSHong Zhang Level: beginner 2014a21f80fcSHong Zhang 201596a0c994SBarry Smith References: 201696a0c994SBarry Smith . MUMPS Users' Guide 2017a21f80fcSHong Zhang 20189fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2019a21f80fcSHong Zhang @*/ 2020bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl(Mat F,PetscInt icntl,PetscInt *ival) 2021bc6112feSHong Zhang { 2022bc6112feSHong Zhang PetscErrorCode ierr; 2023bc6112feSHong Zhang 2024bc6112feSHong Zhang PetscFunctionBegin; 20252989dfd4SHong Zhang PetscValidType(F,1); 20262989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2027bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2028bc6112feSHong Zhang PetscValidIntPointer(ival,3); 20292989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetIcntl_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2030bc6112feSHong Zhang PetscFunctionReturn(0); 2031bc6112feSHong Zhang } 2032bc6112feSHong Zhang 20338928b65cSHong Zhang /* -------------------------------------------------------------------------------------------*/ 20348928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal val) 20358928b65cSHong Zhang { 2036e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 20378928b65cSHong Zhang 20388928b65cSHong Zhang PetscFunctionBegin; 20398928b65cSHong Zhang mumps->id.CNTL(icntl) = val; 20408928b65cSHong Zhang PetscFunctionReturn(0); 20418928b65cSHong Zhang } 20428928b65cSHong Zhang 2043bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal *val) 2044bc6112feSHong Zhang { 2045e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2046bc6112feSHong Zhang 2047bc6112feSHong Zhang PetscFunctionBegin; 2048bc6112feSHong Zhang *val = mumps->id.CNTL(icntl); 2049bc6112feSHong Zhang PetscFunctionReturn(0); 2050bc6112feSHong Zhang } 2051bc6112feSHong Zhang 20528928b65cSHong Zhang /*@ 20538928b65cSHong Zhang MatMumpsSetCntl - Set MUMPS parameter CNTL() 20548928b65cSHong Zhang 20558928b65cSHong Zhang Logically Collective on Mat 20568928b65cSHong Zhang 20578928b65cSHong Zhang Input Parameters: 20588928b65cSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 20598928b65cSHong Zhang . icntl - index of MUMPS parameter array CNTL() 20608928b65cSHong Zhang - val - value of MUMPS CNTL(icntl) 20618928b65cSHong Zhang 20628928b65cSHong Zhang Options Database: 20638928b65cSHong Zhang . -mat_mumps_cntl_<icntl> <val> 20648928b65cSHong Zhang 20658928b65cSHong Zhang Level: beginner 20668928b65cSHong Zhang 206796a0c994SBarry Smith References: 206896a0c994SBarry Smith . MUMPS Users' Guide 20698928b65cSHong Zhang 20709fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 20718928b65cSHong Zhang @*/ 20728928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl(Mat F,PetscInt icntl,PetscReal val) 20738928b65cSHong Zhang { 20748928b65cSHong Zhang PetscErrorCode ierr; 20758928b65cSHong Zhang 20768928b65cSHong Zhang PetscFunctionBegin; 20772989dfd4SHong Zhang PetscValidType(F,1); 20782989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 20798928b65cSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2080bc6112feSHong Zhang PetscValidLogicalCollectiveReal(F,val,3); 20818928b65cSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetCntl_C",(Mat,PetscInt,PetscReal),(F,icntl,val));CHKERRQ(ierr); 20828928b65cSHong Zhang PetscFunctionReturn(0); 20838928b65cSHong Zhang } 20848928b65cSHong Zhang 2085a21f80fcSHong Zhang /*@ 2086a21f80fcSHong Zhang MatMumpsGetCntl - Get MUMPS parameter CNTL() 2087a21f80fcSHong Zhang 2088a21f80fcSHong Zhang Logically Collective on Mat 2089a21f80fcSHong Zhang 2090a21f80fcSHong Zhang Input Parameters: 2091a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2092a21f80fcSHong Zhang - icntl - index of MUMPS parameter array CNTL() 2093a21f80fcSHong Zhang 2094a21f80fcSHong Zhang Output Parameter: 2095a21f80fcSHong Zhang . val - value of MUMPS CNTL(icntl) 2096a21f80fcSHong Zhang 2097a21f80fcSHong Zhang Level: beginner 2098a21f80fcSHong Zhang 209996a0c994SBarry Smith References: 210096a0c994SBarry Smith . MUMPS Users' Guide 2101a21f80fcSHong Zhang 21029fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2103a21f80fcSHong Zhang @*/ 2104bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl(Mat F,PetscInt icntl,PetscReal *val) 2105bc6112feSHong Zhang { 2106bc6112feSHong Zhang PetscErrorCode ierr; 2107bc6112feSHong Zhang 2108bc6112feSHong Zhang PetscFunctionBegin; 21092989dfd4SHong Zhang PetscValidType(F,1); 21102989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2111bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2112bc6112feSHong Zhang PetscValidRealPointer(val,3); 21132989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetCntl_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2114bc6112feSHong Zhang PetscFunctionReturn(0); 2115bc6112feSHong Zhang } 2116bc6112feSHong Zhang 2117ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo_MUMPS(Mat F,PetscInt icntl,PetscInt *info) 2118bc6112feSHong Zhang { 2119e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2120bc6112feSHong Zhang 2121bc6112feSHong Zhang PetscFunctionBegin; 2122bc6112feSHong Zhang *info = mumps->id.INFO(icntl); 2123bc6112feSHong Zhang PetscFunctionReturn(0); 2124bc6112feSHong Zhang } 2125bc6112feSHong Zhang 2126ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog_MUMPS(Mat F,PetscInt icntl,PetscInt *infog) 2127bc6112feSHong Zhang { 2128e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2129bc6112feSHong Zhang 2130bc6112feSHong Zhang PetscFunctionBegin; 2131bc6112feSHong Zhang *infog = mumps->id.INFOG(icntl); 2132bc6112feSHong Zhang PetscFunctionReturn(0); 2133bc6112feSHong Zhang } 2134bc6112feSHong Zhang 2135ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfo) 2136bc6112feSHong Zhang { 2137e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2138bc6112feSHong Zhang 2139bc6112feSHong Zhang PetscFunctionBegin; 2140bc6112feSHong Zhang *rinfo = mumps->id.RINFO(icntl); 2141bc6112feSHong Zhang PetscFunctionReturn(0); 2142bc6112feSHong Zhang } 2143bc6112feSHong Zhang 2144ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfog) 2145bc6112feSHong Zhang { 2146e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2147bc6112feSHong Zhang 2148bc6112feSHong Zhang PetscFunctionBegin; 2149bc6112feSHong Zhang *rinfog = mumps->id.RINFOG(icntl); 2150bc6112feSHong Zhang PetscFunctionReturn(0); 2151bc6112feSHong Zhang } 2152bc6112feSHong Zhang 215389a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse_MUMPS(Mat F,Mat spRHS) 2154bb599dfdSHong Zhang { 2155bb599dfdSHong Zhang PetscErrorCode ierr; 21560e6b8875SHong Zhang Mat Bt = NULL,Btseq = NULL; 21570e6b8875SHong Zhang PetscBool flg; 2158bb599dfdSHong Zhang Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2159bb599dfdSHong Zhang PetscScalar *aa; 2160bb599dfdSHong Zhang PetscInt spnr,*ia,*ja; 2161bb599dfdSHong Zhang 2162bb599dfdSHong Zhang PetscFunctionBegin; 2163e3f2db6aSHong Zhang PetscValidIntPointer(spRHS,2); 21640e6b8875SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)spRHS,MATTRANSPOSEMAT,&flg);CHKERRQ(ierr); 21650e6b8875SHong Zhang if (flg) { 2166bb599dfdSHong Zhang ierr = MatTransposeGetMat(spRHS,&Bt);CHKERRQ(ierr); 21670e6b8875SHong Zhang } else SETERRQ(PetscObjectComm((PetscObject)spRHS),PETSC_ERR_ARG_WRONG,"Matrix spRHS must be type MATTRANSPOSEMAT matrix"); 2168bb599dfdSHong Zhang 2169bb599dfdSHong Zhang ierr = MatMumpsSetIcntl(F,30,1);CHKERRQ(ierr); 2170bb599dfdSHong Zhang 21712d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 21720e6b8875SHong Zhang Mat_MPIAIJ *b = (Mat_MPIAIJ*)Bt->data; 21730e6b8875SHong Zhang Btseq = b->A; 21740e6b8875SHong Zhang } else { 21750e6b8875SHong Zhang Btseq = Bt; 21760e6b8875SHong Zhang } 21770e6b8875SHong Zhang 2178e3f2db6aSHong Zhang if (!mumps->myid) { 21790e6b8875SHong Zhang ierr = MatSeqAIJGetArray(Btseq,&aa);CHKERRQ(ierr); 21800e6b8875SHong Zhang ierr = MatGetRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 21810e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2182bb599dfdSHong Zhang 2183bb599dfdSHong Zhang mumps->id.irhs_ptr = ia; 2184bb599dfdSHong Zhang mumps->id.irhs_sparse = ja; 2185bb599dfdSHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 2186bb599dfdSHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 2187e3f2db6aSHong Zhang } else { 2188e3f2db6aSHong Zhang mumps->id.irhs_ptr = NULL; 2189e3f2db6aSHong Zhang mumps->id.irhs_sparse = NULL; 2190e3f2db6aSHong Zhang mumps->id.nz_rhs = 0; 2191e3f2db6aSHong Zhang mumps->id.rhs_sparse = NULL; 2192e3f2db6aSHong Zhang } 2193bb599dfdSHong Zhang mumps->id.ICNTL(20) = 1; /* rhs is sparse */ 2194e3f2db6aSHong Zhang mumps->id.ICNTL(21) = 0; /* solution is in assembled centralized format */ 2195bb599dfdSHong Zhang 2196bb599dfdSHong Zhang /* solve phase */ 2197bb599dfdSHong Zhang /*-------------*/ 2198bb599dfdSHong Zhang mumps->id.job = JOB_SOLVE; 21993ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 2200e3f2db6aSHong Zhang if (mumps->id.INFOG(1) < 0) 2201e3f2db6aSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 220214267174SHong Zhang 2203e3f2db6aSHong Zhang if (!mumps->myid) { 22040e6b8875SHong Zhang ierr = MatSeqAIJRestoreArray(Btseq,&aa);CHKERRQ(ierr); 22050e6b8875SHong Zhang ierr = MatRestoreRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 22060e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2207e3f2db6aSHong Zhang } 2208bb599dfdSHong Zhang PetscFunctionReturn(0); 2209bb599dfdSHong Zhang } 2210bb599dfdSHong Zhang 2211bb599dfdSHong Zhang /*@ 221289a9c03aSHong Zhang MatMumpsGetInverse - Get user-specified set of entries in inverse of A 2213bb599dfdSHong Zhang 2214bb599dfdSHong Zhang Logically Collective on Mat 2215bb599dfdSHong Zhang 2216bb599dfdSHong Zhang Input Parameters: 2217bb599dfdSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2218e3f2db6aSHong Zhang - spRHS - sequential sparse matrix in MATTRANSPOSEMAT format holding specified indices in processor[0] 2219bb599dfdSHong Zhang 2220bb599dfdSHong Zhang Output Parameter: 2221e3f2db6aSHong Zhang . spRHS - requested entries of inverse of A 2222bb599dfdSHong Zhang 2223bb599dfdSHong Zhang Level: beginner 2224bb599dfdSHong Zhang 2225bb599dfdSHong Zhang References: 2226bb599dfdSHong Zhang . MUMPS Users' Guide 2227bb599dfdSHong Zhang 2228bb599dfdSHong Zhang .seealso: MatGetFactor(), MatCreateTranspose() 2229bb599dfdSHong Zhang @*/ 223089a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse(Mat F,Mat spRHS) 2231bb599dfdSHong Zhang { 2232bb599dfdSHong Zhang PetscErrorCode ierr; 2233bb599dfdSHong Zhang 2234bb599dfdSHong Zhang PetscFunctionBegin; 2235bb599dfdSHong Zhang PetscValidType(F,1); 2236bb599dfdSHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 223789a9c03aSHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverse_C",(Mat,Mat),(F,spRHS));CHKERRQ(ierr); 2238bb599dfdSHong Zhang PetscFunctionReturn(0); 2239bb599dfdSHong Zhang } 2240bb599dfdSHong Zhang 22410e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose_MUMPS(Mat F,Mat spRHST) 22420e6b8875SHong Zhang { 22430e6b8875SHong Zhang PetscErrorCode ierr; 22440e6b8875SHong Zhang Mat spRHS; 22450e6b8875SHong Zhang 22460e6b8875SHong Zhang PetscFunctionBegin; 22470e6b8875SHong Zhang ierr = MatCreateTranspose(spRHST,&spRHS);CHKERRQ(ierr); 22480e6b8875SHong Zhang ierr = MatMumpsGetInverse_MUMPS(F,spRHS);CHKERRQ(ierr); 22490e6b8875SHong Zhang ierr = MatDestroy(&spRHS);CHKERRQ(ierr); 22500e6b8875SHong Zhang PetscFunctionReturn(0); 22510e6b8875SHong Zhang } 22520e6b8875SHong Zhang 22530e6b8875SHong Zhang /*@ 2254eef1237cSHong Zhang MatMumpsGetInverseTranspose - Get user-specified set of entries in inverse of matrix A^T 22550e6b8875SHong Zhang 22560e6b8875SHong Zhang Logically Collective on Mat 22570e6b8875SHong Zhang 22580e6b8875SHong Zhang Input Parameters: 22590e6b8875SHong Zhang + F - the factored matrix of A obtained by calling MatGetFactor() from PETSc-MUMPS interface 22600e6b8875SHong Zhang - spRHST - sequential sparse matrix in MATAIJ format holding specified indices of A^T in processor[0] 22610e6b8875SHong Zhang 22620e6b8875SHong Zhang Output Parameter: 22630e6b8875SHong Zhang . spRHST - requested entries of inverse of A^T 22640e6b8875SHong Zhang 22650e6b8875SHong Zhang Level: beginner 22660e6b8875SHong Zhang 22670e6b8875SHong Zhang References: 22680e6b8875SHong Zhang . MUMPS Users' Guide 22690e6b8875SHong Zhang 22700e6b8875SHong Zhang .seealso: MatGetFactor(), MatCreateTranspose(), MatMumpsGetInverse() 22710e6b8875SHong Zhang @*/ 22720e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose(Mat F,Mat spRHST) 22730e6b8875SHong Zhang { 22740e6b8875SHong Zhang PetscErrorCode ierr; 22750e6b8875SHong Zhang PetscBool flg; 22760e6b8875SHong Zhang 22770e6b8875SHong Zhang PetscFunctionBegin; 22780e6b8875SHong Zhang PetscValidType(F,1); 22790e6b8875SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 22800e6b8875SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)spRHST,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 22810e6b8875SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)spRHST),PETSC_ERR_ARG_WRONG,"Matrix spRHST must be MATAIJ matrix"); 22820e6b8875SHong Zhang 22830e6b8875SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverseTranspose_C",(Mat,Mat),(F,spRHST));CHKERRQ(ierr); 22840e6b8875SHong Zhang PetscFunctionReturn(0); 22850e6b8875SHong Zhang } 22860e6b8875SHong Zhang 2287a21f80fcSHong Zhang /*@ 2288a21f80fcSHong Zhang MatMumpsGetInfo - Get MUMPS parameter INFO() 2289a21f80fcSHong Zhang 2290a21f80fcSHong Zhang Logically Collective on Mat 2291a21f80fcSHong Zhang 2292a21f80fcSHong Zhang Input Parameters: 2293a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2294a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFO() 2295a21f80fcSHong Zhang 2296a21f80fcSHong Zhang Output Parameter: 2297a21f80fcSHong Zhang . ival - value of MUMPS INFO(icntl) 2298a21f80fcSHong Zhang 2299a21f80fcSHong Zhang Level: beginner 2300a21f80fcSHong Zhang 230196a0c994SBarry Smith References: 230296a0c994SBarry Smith . MUMPS Users' Guide 2303a21f80fcSHong Zhang 23049fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2305a21f80fcSHong Zhang @*/ 2306ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo(Mat F,PetscInt icntl,PetscInt *ival) 2307bc6112feSHong Zhang { 2308bc6112feSHong Zhang PetscErrorCode ierr; 2309bc6112feSHong Zhang 2310bc6112feSHong Zhang PetscFunctionBegin; 23112989dfd4SHong Zhang PetscValidType(F,1); 23122989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2313ca810319SHong Zhang PetscValidIntPointer(ival,3); 23142989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfo_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2315bc6112feSHong Zhang PetscFunctionReturn(0); 2316bc6112feSHong Zhang } 2317bc6112feSHong Zhang 2318a21f80fcSHong Zhang /*@ 2319a21f80fcSHong Zhang MatMumpsGetInfog - Get MUMPS parameter INFOG() 2320a21f80fcSHong Zhang 2321a21f80fcSHong Zhang Logically Collective on Mat 2322a21f80fcSHong Zhang 2323a21f80fcSHong Zhang Input Parameters: 2324a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2325a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFOG() 2326a21f80fcSHong Zhang 2327a21f80fcSHong Zhang Output Parameter: 2328a21f80fcSHong Zhang . ival - value of MUMPS INFOG(icntl) 2329a21f80fcSHong Zhang 2330a21f80fcSHong Zhang Level: beginner 2331a21f80fcSHong Zhang 233296a0c994SBarry Smith References: 233396a0c994SBarry Smith . MUMPS Users' Guide 2334a21f80fcSHong Zhang 23359fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2336a21f80fcSHong Zhang @*/ 2337ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog(Mat F,PetscInt icntl,PetscInt *ival) 2338bc6112feSHong Zhang { 2339bc6112feSHong Zhang PetscErrorCode ierr; 2340bc6112feSHong Zhang 2341bc6112feSHong Zhang PetscFunctionBegin; 23422989dfd4SHong Zhang PetscValidType(F,1); 23432989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2344ca810319SHong Zhang PetscValidIntPointer(ival,3); 23452989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfog_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2346bc6112feSHong Zhang PetscFunctionReturn(0); 2347bc6112feSHong Zhang } 2348bc6112feSHong Zhang 2349a21f80fcSHong Zhang /*@ 2350a21f80fcSHong Zhang MatMumpsGetRinfo - Get MUMPS parameter RINFO() 2351a21f80fcSHong Zhang 2352a21f80fcSHong Zhang Logically Collective on Mat 2353a21f80fcSHong Zhang 2354a21f80fcSHong Zhang Input Parameters: 2355a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2356a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFO() 2357a21f80fcSHong Zhang 2358a21f80fcSHong Zhang Output Parameter: 2359a21f80fcSHong Zhang . val - value of MUMPS RINFO(icntl) 2360a21f80fcSHong Zhang 2361a21f80fcSHong Zhang Level: beginner 2362a21f80fcSHong Zhang 236396a0c994SBarry Smith References: 236496a0c994SBarry Smith . MUMPS Users' Guide 2365a21f80fcSHong Zhang 23669fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2367a21f80fcSHong Zhang @*/ 2368ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo(Mat F,PetscInt icntl,PetscReal *val) 2369bc6112feSHong Zhang { 2370bc6112feSHong Zhang PetscErrorCode ierr; 2371bc6112feSHong Zhang 2372bc6112feSHong Zhang PetscFunctionBegin; 23732989dfd4SHong Zhang PetscValidType(F,1); 23742989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2375bc6112feSHong Zhang PetscValidRealPointer(val,3); 23762989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfo_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2377bc6112feSHong Zhang PetscFunctionReturn(0); 2378bc6112feSHong Zhang } 2379bc6112feSHong Zhang 2380a21f80fcSHong Zhang /*@ 2381a21f80fcSHong Zhang MatMumpsGetRinfog - Get MUMPS parameter RINFOG() 2382a21f80fcSHong Zhang 2383a21f80fcSHong Zhang Logically Collective on Mat 2384a21f80fcSHong Zhang 2385a21f80fcSHong Zhang Input Parameters: 2386a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2387a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFOG() 2388a21f80fcSHong Zhang 2389a21f80fcSHong Zhang Output Parameter: 2390a21f80fcSHong Zhang . val - value of MUMPS RINFOG(icntl) 2391a21f80fcSHong Zhang 2392a21f80fcSHong Zhang Level: beginner 2393a21f80fcSHong Zhang 239496a0c994SBarry Smith References: 239596a0c994SBarry Smith . MUMPS Users' Guide 2396a21f80fcSHong Zhang 23979fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2398a21f80fcSHong Zhang @*/ 2399ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog(Mat F,PetscInt icntl,PetscReal *val) 2400bc6112feSHong Zhang { 2401bc6112feSHong Zhang PetscErrorCode ierr; 2402bc6112feSHong Zhang 2403bc6112feSHong Zhang PetscFunctionBegin; 24042989dfd4SHong Zhang PetscValidType(F,1); 24052989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2406bc6112feSHong Zhang PetscValidRealPointer(val,3); 24072989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfog_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2408bc6112feSHong Zhang PetscFunctionReturn(0); 2409bc6112feSHong Zhang } 2410bc6112feSHong Zhang 241124b6179bSKris Buschelman /*MC 24122692d6eeSBarry Smith MATSOLVERMUMPS - A matrix type providing direct solvers (LU and Cholesky) for 241324b6179bSKris Buschelman distributed and sequential matrices via the external package MUMPS. 241424b6179bSKris Buschelman 241541c8de11SBarry Smith Works with MATAIJ and MATSBAIJ matrices 241624b6179bSKris Buschelman 2417c2b89b5dSBarry Smith Use ./configure --download-mumps --download-scalapack --download-parmetis --download-metis --download-ptscotch to have PETSc installed with MUMPS 2418c2b89b5dSBarry Smith 2419217d3b1eSJunchao Zhang Use ./configure --with-openmp --download-hwloc (or --with-hwloc) to enable running MUMPS in MPI+OpenMP hybrid mode and non-MUMPS in flat-MPI mode. See details below. 2420217d3b1eSJunchao Zhang 24213ca39a21SBarry Smith Use -pc_type cholesky or lu -pc_factor_mat_solver_type mumps to use this direct solver 2422c2b89b5dSBarry Smith 242324b6179bSKris Buschelman Options Database Keys: 24244422a9fcSPatrick Sanan + -mat_mumps_icntl_1 - ICNTL(1): output stream for error messages 24254422a9fcSPatrick Sanan . -mat_mumps_icntl_2 - ICNTL(2): output stream for diagnostic printing, statistics, and warning 24264422a9fcSPatrick Sanan . -mat_mumps_icntl_3 - ICNTL(3): output stream for global information, collected on the host 24274422a9fcSPatrick Sanan . -mat_mumps_icntl_4 - ICNTL(4): level of printing (0 to 4) 24284422a9fcSPatrick Sanan . -mat_mumps_icntl_6 - ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7) 24294422a9fcSPatrick Sanan . -mat_mumps_icntl_7 - ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis 24304422a9fcSPatrick Sanan . -mat_mumps_icntl_8 - ICNTL(8): scaling strategy (-2 to 8 or 77) 24314422a9fcSPatrick Sanan . -mat_mumps_icntl_10 - ICNTL(10): max num of refinements 24324422a9fcSPatrick Sanan . -mat_mumps_icntl_11 - ICNTL(11): statistics related to an error analysis (via -ksp_view) 24334422a9fcSPatrick Sanan . -mat_mumps_icntl_12 - ICNTL(12): an ordering strategy for symmetric matrices (0 to 3) 24344422a9fcSPatrick Sanan . -mat_mumps_icntl_13 - ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting 24354422a9fcSPatrick Sanan . -mat_mumps_icntl_14 - ICNTL(14): percentage increase in the estimated working space 24364422a9fcSPatrick Sanan . -mat_mumps_icntl_19 - ICNTL(19): computes the Schur complement 24374422a9fcSPatrick Sanan . -mat_mumps_icntl_22 - ICNTL(22): in-core/out-of-core factorization and solve (0 or 1) 24384422a9fcSPatrick Sanan . -mat_mumps_icntl_23 - ICNTL(23): max size of the working memory (MB) that can allocate per processor 24394422a9fcSPatrick Sanan . -mat_mumps_icntl_24 - ICNTL(24): detection of null pivot rows (0 or 1) 24404422a9fcSPatrick Sanan . -mat_mumps_icntl_25 - ICNTL(25): compute a solution of a deficient matrix and a null space basis 24414422a9fcSPatrick Sanan . -mat_mumps_icntl_26 - ICNTL(26): drives the solution phase if a Schur complement matrix 24424422a9fcSPatrick Sanan . -mat_mumps_icntl_28 - ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering 24434422a9fcSPatrick Sanan . -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis 24444422a9fcSPatrick Sanan . -mat_mumps_icntl_30 - ICNTL(30): compute user-specified set of entries in inv(A) 24454422a9fcSPatrick Sanan . -mat_mumps_icntl_31 - ICNTL(31): indicates which factors may be discarded during factorization 24464422a9fcSPatrick Sanan . -mat_mumps_icntl_33 - ICNTL(33): compute determinant 24474422a9fcSPatrick Sanan . -mat_mumps_cntl_1 - CNTL(1): relative pivoting threshold 24484422a9fcSPatrick Sanan . -mat_mumps_cntl_2 - CNTL(2): stopping criterion of refinement 24494422a9fcSPatrick Sanan . -mat_mumps_cntl_3 - CNTL(3): absolute pivoting threshold 24504422a9fcSPatrick Sanan . -mat_mumps_cntl_4 - CNTL(4): value for static pivoting 2451217d3b1eSJunchao Zhang . -mat_mumps_cntl_5 - CNTL(5): fixation for null pivots 2452217d3b1eSJunchao Zhang - -mat_mumps_use_omp_threads [m] - run MUMPS in MPI+OpenMP hybrid mode as if omp_set_num_threads(m) is called before calling MUMPS. 2453217d3b1eSJunchao Zhang Default might be the number of cores per CPU package (socket) as reported by hwloc and suggested by the MUMPS manual. 245424b6179bSKris Buschelman 245524b6179bSKris Buschelman Level: beginner 245624b6179bSKris Buschelman 245795452b02SPatrick Sanan Notes: 2458c0decd05SBarry Smith When a MUMPS factorization fails inside a KSP solve, for example with a KSP_DIVERGED_PC_FAILED, one can find the MUMPS information about the failure by calling 24599fc87aa7SBarry Smith $ KSPGetPC(ksp,&pc); 24609fc87aa7SBarry Smith $ PCFactorGetMatrix(pc,&mat); 24619fc87aa7SBarry Smith $ MatMumpsGetInfo(mat,....); 24629fc87aa7SBarry Smith $ MatMumpsGetInfog(mat,....); etc. 24639fc87aa7SBarry Smith Or you can run with -ksp_error_if_not_converged and the program will be stopped and the information printed in the error message. 24649fc87aa7SBarry Smith 2465217d3b1eSJunchao Zhang If you want to run MUMPS in MPI+OpenMP hybrid mode (i.e., enable multithreading in MUMPS), but still want to run the non-MUMPS part 2466217d3b1eSJunchao Zhang (i.e., PETSc part) of your code in the so-called flat-MPI (aka pure-MPI) mode, you need to configure PETSc with --with-openmp --download-hwloc 2467217d3b1eSJunchao Zhang (or --with-hwloc), and have an MPI that supports MPI-3.0's process shared memory (which is usually available). Since MUMPS calls BLAS 2468217d3b1eSJunchao Zhang libraries, to really get performance, you should have multithreaded BLAS libraries such as Intel MKL, AMD ACML, Cray libSci or open sourced 2469217d3b1eSJunchao Zhang OpenBLAS (PETSc has configure options to install/specify them). With these conditions met, you can run your program as before but with 2470217d3b1eSJunchao Zhang an extra option -mat_mumps_use_omp_threads [m]. It works as if we set OMP_NUM_THREADS=m to MUMPS, with m defaults to the number of cores 2471217d3b1eSJunchao Zhang per CPU socket (or package, in hwloc term), or number of PETSc MPI processes on a node, whichever is smaller. 2472217d3b1eSJunchao Zhang 2473217d3b1eSJunchao Zhang By flat-MPI or pure-MPI mode, it means you run your code with as many MPI ranks as the number of cores. For example, 2474217d3b1eSJunchao Zhang if a compute node has 32 cores and you run on two nodes, you may use "mpirun -n 64 ./test". To run MPI+OpenMP hybrid MUMPS, 2475217d3b1eSJunchao Zhang the tranditional way is to set OMP_NUM_THREADS and run with fewer MPI ranks than cores. For example, if you want to have 16 OpenMP 2476217d3b1eSJunchao Zhang threads per rank, then you may use "export OMP_NUM_THREADS=16 && mpirun -n 4 ./test". The problem of this approach is that the non-MUMPS 2477217d3b1eSJunchao Zhang part of your code is run with fewer cores and CPUs are wasted. "-mat_mumps_use_omp_threads [m]" provides an alternative such that 2478217d3b1eSJunchao Zhang you can stil run your code with as many MPI ranks as the number of cores, but have MUMPS run in MPI+OpenMP hybrid mode. In our example, 2479217d3b1eSJunchao Zhang you can use "mpirun -n 64 ./test -mat_mumps_use_omp_threads 16". 2480217d3b1eSJunchao Zhang 2481217d3b1eSJunchao Zhang If you run your code through a job submission system, there are caveats in MPI rank mapping. We use MPI_Comm_split_type to get MPI 2482217d3b1eSJunchao Zhang processes on each compute node. Listing the processes in rank ascending order, we split processes on a node into consecutive groups of 2483217d3b1eSJunchao Zhang size m and create a communicator called omp_comm for each group. Rank 0 in an omp_comm is called the master rank, and others in the omp_comm 2484217d3b1eSJunchao Zhang are called slave ranks (or slaves). Only master ranks are seen to MUMPS and slaves are not. We will free CPUs assigned to slaves (might be set 2485217d3b1eSJunchao Zhang by CPU binding policies in job scripts) and make the CPUs available to the master so that OMP threads spawned by MUMPS can run on the CPUs. 2486217d3b1eSJunchao Zhang In a multi-socket compute node, MPI rank mapping is an issue. Still use the above example and suppose your compute node has two sockets, 2487217d3b1eSJunchao Zhang if you interleave MPI ranks on the two sockets, in other words, even ranks are placed on socket 0, and odd ranks are on socket 1, and bind 2488217d3b1eSJunchao Zhang MPI ranks to cores, then with -mat_mumps_use_omp_threads 16, a master rank (and threads it spawns) will use half cores in socket 0, and half 2489217d3b1eSJunchao Zhang cores in socket 1, that definitely hurts locality. On the other hand, if you map MPI ranks consecutively on the two sockets, then the 2490217d3b1eSJunchao Zhang problem will not happen. Therefore, when you use -mat_mumps_use_omp_threads, you need to keep an eye on your MPI rank mapping and CPU binding. 2491217d3b1eSJunchao Zhang For example, with the Slurm job scheduler, one can use srun --cpu-bind=verbsoe -m block:block to map consecutive MPI ranks to sockets and 2492217d3b1eSJunchao Zhang examine the mapping result. 2493217d3b1eSJunchao Zhang 2494217d3b1eSJunchao Zhang PETSc does not control thread binding in MUMPS. So to get best performance, one still has to set OMP_PROC_BIND and OMP_PLACES in job scripts, 2495217d3b1eSJunchao Zhang for example, export OMP_PLACES=threads and export OMP_PROC_BIND=spread. One does not need to export OMP_NUM_THREADS=m in job scripts as PETSc 2496217d3b1eSJunchao Zhang calls omp_set_num_threads(m) internally before calling MUMPS. 2497217d3b1eSJunchao Zhang 2498217d3b1eSJunchao Zhang References: 2499217d3b1eSJunchao Zhang + 1. - Heroux, Michael A., R. Brightwell, and Michael M. Wolf. "Bi-modal MPI and MPI+ threads computing on scalable multicore systems." IJHPCA (Submitted) (2011). 2500217d3b1eSJunchao Zhang - 2. - Gutierrez, Samuel K., et al. "Accommodating Thread-Level Heterogeneity in Coupled Parallel Applications." Parallel and Distributed Processing Symposium (IPDPS), 2017 IEEE International. IEEE, 2017. 2501217d3b1eSJunchao Zhang 25023ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog(), KSPGetPC(), PCGetFactor(), PCFactorGetMatrix() 250341c8de11SBarry Smith 250424b6179bSKris Buschelman M*/ 250524b6179bSKris Buschelman 2506ea799195SBarry Smith static PetscErrorCode MatFactorGetSolverType_mumps(Mat A,MatSolverType *type) 250735bd34faSBarry Smith { 250835bd34faSBarry Smith PetscFunctionBegin; 25092692d6eeSBarry Smith *type = MATSOLVERMUMPS; 251035bd34faSBarry Smith PetscFunctionReturn(0); 251135bd34faSBarry Smith } 251235bd34faSBarry Smith 2513bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI AIJ matrices */ 2514cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_aij_mumps(Mat A,MatFactorType ftype,Mat *F) 25152877fffaSHong Zhang { 25162877fffaSHong Zhang Mat B; 25172877fffaSHong Zhang PetscErrorCode ierr; 25182877fffaSHong Zhang Mat_MUMPS *mumps; 2519ace3abfcSBarry Smith PetscBool isSeqAIJ; 25202877fffaSHong Zhang 25212877fffaSHong Zhang PetscFunctionBegin; 25222877fffaSHong Zhang /* Create the factorization matrix */ 2523251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ);CHKERRQ(ierr); 2524ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 25252877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2526e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2527e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 25282877fffaSHong Zhang 2529b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 25302205254eSKarl Rupp 25312877fffaSHong Zhang B->ops->view = MatView_MUMPS; 253235bd34faSBarry Smith B->ops->getinfo = MatGetInfo_MUMPS; 25332205254eSKarl Rupp 25343ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 25355a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 25365a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2537bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2538bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2539bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2540bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2541ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2542ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2543ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2544ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 254589a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 25460e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 25476444a565SStefano Zampini 2548450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2549450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 2550d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 2551bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqaij; 2552bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpiaij; 2553746480a1SHong Zhang mumps->sym = 0; 2554dcd589f8SShri Abhyankar } else { 255567877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2556450b117fSShri Abhyankar B->factortype = MAT_FACTOR_CHOLESKY; 2557bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqsbaij; 2558bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpisbaij; 255959ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 256059ac8732SStefano Zampini mumps->sym = 2; 256159ac8732SStefano Zampini #else 25626fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 25636fdc2a6dSBarry Smith else mumps->sym = 2; 256459ac8732SStefano Zampini #endif 2565450b117fSShri Abhyankar } 25662877fffaSHong Zhang 256700c67f3bSHong Zhang /* set solvertype */ 256800c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 256900c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 257000c67f3bSHong Zhang 25712877fffaSHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2572e69c285eSBarry Smith B->data = (void*)mumps; 25732205254eSKarl Rupp 2574f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2575746480a1SHong Zhang 25762877fffaSHong Zhang *F = B; 25772877fffaSHong Zhang PetscFunctionReturn(0); 25782877fffaSHong Zhang } 25792877fffaSHong Zhang 2580bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI SBAIJ matrices */ 2581cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_sbaij_mumps(Mat A,MatFactorType ftype,Mat *F) 25822877fffaSHong Zhang { 25832877fffaSHong Zhang Mat B; 25842877fffaSHong Zhang PetscErrorCode ierr; 25852877fffaSHong Zhang Mat_MUMPS *mumps; 2586ace3abfcSBarry Smith PetscBool isSeqSBAIJ; 25872877fffaSHong Zhang 25882877fffaSHong Zhang PetscFunctionBegin; 2589ce94432eSBarry Smith if (ftype != MAT_FACTOR_CHOLESKY) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with MUMPS LU, use AIJ matrix"); 2590ce94432eSBarry Smith if (A->rmap->bs > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with block size > 1 with MUMPS Cholesky, use AIJ matrix instead"); 2591251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ);CHKERRQ(ierr); 25922877fffaSHong Zhang /* Create the factorization matrix */ 2593ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 25942877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2595e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2596e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2597e69c285eSBarry Smith 2598b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2599bccb9932SShri Abhyankar if (isSeqSBAIJ) { 260016ebf90aSShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_seqsbaij_seqsbaij; 2601dcd589f8SShri Abhyankar } else { 2602bccb9932SShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_mpisbaij_mpisbaij; 2603bccb9932SShri Abhyankar } 2604bccb9932SShri Abhyankar 2605e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 260667877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2607bccb9932SShri Abhyankar B->ops->view = MatView_MUMPS; 26082205254eSKarl Rupp 26093ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 26105a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 26115a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2612b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2613b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2614b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2615b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2616ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2617ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2618ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2619ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 262089a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2621eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 26222205254eSKarl Rupp 2623f4762488SHong Zhang B->factortype = MAT_FACTOR_CHOLESKY; 262459ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 262559ac8732SStefano Zampini mumps->sym = 2; 262659ac8732SStefano Zampini #else 26276fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 26286fdc2a6dSBarry Smith else mumps->sym = 2; 262959ac8732SStefano Zampini #endif 2630a214ac2aSShri Abhyankar 263100c67f3bSHong Zhang /* set solvertype */ 263200c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 263300c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 263400c67f3bSHong Zhang 2635f3c0ef26SHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2636e69c285eSBarry Smith B->data = (void*)mumps; 26372205254eSKarl Rupp 2638f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2639746480a1SHong Zhang 26402877fffaSHong Zhang *F = B; 26412877fffaSHong Zhang PetscFunctionReturn(0); 26422877fffaSHong Zhang } 264397969023SHong Zhang 2644cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_baij_mumps(Mat A,MatFactorType ftype,Mat *F) 264567877ebaSShri Abhyankar { 264667877ebaSShri Abhyankar Mat B; 264767877ebaSShri Abhyankar PetscErrorCode ierr; 264867877ebaSShri Abhyankar Mat_MUMPS *mumps; 2649ace3abfcSBarry Smith PetscBool isSeqBAIJ; 265067877ebaSShri Abhyankar 265167877ebaSShri Abhyankar PetscFunctionBegin; 265267877ebaSShri Abhyankar /* Create the factorization matrix */ 2653251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&isSeqBAIJ);CHKERRQ(ierr); 2654ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 265567877ebaSShri Abhyankar ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2656e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2657e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2658450b117fSShri Abhyankar 2659b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2660450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2661450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_BAIJMUMPS; 2662450b117fSShri Abhyankar B->factortype = MAT_FACTOR_LU; 2663bccb9932SShri Abhyankar if (isSeqBAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqbaij_seqaij; 2664bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpibaij_mpiaij; 2665746480a1SHong Zhang mumps->sym = 0; 2666f23aa3ddSBarry Smith } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc BAIJ matrices with MUMPS Cholesky, use SBAIJ or AIJ matrix instead\n"); 2667bccb9932SShri Abhyankar 2668e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 2669450b117fSShri Abhyankar B->ops->view = MatView_MUMPS; 26702205254eSKarl Rupp 26713ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 26725a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 26735a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2674bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2675bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2676bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2677bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2678ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2679ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2680ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2681ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 268289a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2683eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 2684450b117fSShri Abhyankar 268500c67f3bSHong Zhang /* set solvertype */ 268600c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 268700c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 268800c67f3bSHong Zhang 26897ee00b23SStefano Zampini B->ops->destroy = MatDestroy_MUMPS; 26907ee00b23SStefano Zampini B->data = (void*)mumps; 26917ee00b23SStefano Zampini 26927ee00b23SStefano Zampini ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 26937ee00b23SStefano Zampini 26947ee00b23SStefano Zampini *F = B; 26957ee00b23SStefano Zampini PetscFunctionReturn(0); 26967ee00b23SStefano Zampini } 26977ee00b23SStefano Zampini 26987ee00b23SStefano Zampini /* MatGetFactor for Seq and MPI SELL matrices */ 26997ee00b23SStefano Zampini static PetscErrorCode MatGetFactor_sell_mumps(Mat A,MatFactorType ftype,Mat *F) 27007ee00b23SStefano Zampini { 27017ee00b23SStefano Zampini Mat B; 27027ee00b23SStefano Zampini PetscErrorCode ierr; 27037ee00b23SStefano Zampini Mat_MUMPS *mumps; 27047ee00b23SStefano Zampini PetscBool isSeqSELL; 27057ee00b23SStefano Zampini 27067ee00b23SStefano Zampini PetscFunctionBegin; 27077ee00b23SStefano Zampini /* Create the factorization matrix */ 27087ee00b23SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSELL,&isSeqSELL);CHKERRQ(ierr); 27097ee00b23SStefano Zampini ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 27107ee00b23SStefano Zampini ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 27117ee00b23SStefano Zampini ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 27127ee00b23SStefano Zampini ierr = MatSetUp(B);CHKERRQ(ierr); 27137ee00b23SStefano Zampini 27147ee00b23SStefano Zampini ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 27157ee00b23SStefano Zampini 27167ee00b23SStefano Zampini B->ops->view = MatView_MUMPS; 27177ee00b23SStefano Zampini B->ops->getinfo = MatGetInfo_MUMPS; 27187ee00b23SStefano Zampini 27197ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 27207ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 27217ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 27227ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 27237ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 27247ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 27257ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 27267ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 27277ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 27287ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 27297ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 27307ee00b23SStefano Zampini 27317ee00b23SStefano Zampini if (ftype == MAT_FACTOR_LU) { 27327ee00b23SStefano Zampini B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 27337ee00b23SStefano Zampini B->factortype = MAT_FACTOR_LU; 27347ee00b23SStefano Zampini if (isSeqSELL) mumps->ConvertToTriples = MatConvertToTriples_seqsell_seqaij; 27357ee00b23SStefano Zampini else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 27367ee00b23SStefano Zampini mumps->sym = 0; 27377ee00b23SStefano Zampini } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 27387ee00b23SStefano Zampini 27397ee00b23SStefano Zampini /* set solvertype */ 27407ee00b23SStefano Zampini ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 27417ee00b23SStefano Zampini ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 27427ee00b23SStefano Zampini 2743450b117fSShri Abhyankar B->ops->destroy = MatDestroy_MUMPS; 2744e69c285eSBarry Smith B->data = (void*)mumps; 27452205254eSKarl Rupp 2746f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2747746480a1SHong Zhang 2748450b117fSShri Abhyankar *F = B; 2749450b117fSShri Abhyankar PetscFunctionReturn(0); 2750450b117fSShri Abhyankar } 275142c9c57cSBarry Smith 27523ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_MUMPS(void) 275342c9c57cSBarry Smith { 275442c9c57cSBarry Smith PetscErrorCode ierr; 275542c9c57cSBarry Smith 275642c9c57cSBarry Smith PetscFunctionBegin; 27573ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27583ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27593ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27603ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27613ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPISBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 27623ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27633ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 27643ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27653ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 27663ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 27677ee00b23SStefano Zampini ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSELL,MAT_FACTOR_LU,MatGetFactor_sell_mumps);CHKERRQ(ierr); 276842c9c57cSBarry Smith PetscFunctionReturn(0); 276942c9c57cSBarry Smith } 277042c9c57cSBarry Smith 2771